SUPERFAMILY 1.75 HMM library and genome assignments server

Domain combination pairs in Comamonas testosteroni CNB-2

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

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Adjacent domain pairs graph

Graph of adjacent domain pairs.


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Domain combination pairs

670 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
"Winged helix" DNA-binding domain Periplasmic binding protein-like II 1081
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 3820
Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase C-terminal domain-like 354
CheY-like C-terminal effector domain of the bipartite response regulators 272
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 2413
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 204
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 196
Thiolase-like Thiolase-like 182
PYP-like sensor domain (PAS domain) Nucleotide cyclase 1812
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 183
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 177
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 166
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB transmembrane domain 166
PYP-like sensor domain (PAS domain) PYP-like sensor domain (PAS domain) 1615
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 166
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 166
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB transmembrane domain 166
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 156
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 153
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 157
"Winged helix" DNA-binding domain GntR ligand-binding domain-like 141
Actin-like ATPase domain Actin-like ATPase domain 145
Homeodomain-like Tetracyclin repressor-like, C-terminal domain 142
"Winged helix" DNA-binding domain GAF domain-like 141
Nucleotide cyclase EAL domain-like 1410
Thioredoxin-like GST C-terminal domain-like 131
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 134
GroES-like NAD(P)-binding Rossmann-fold domains 123
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 125
Cytochrome c Cytochrome c 126
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 1210
Composite domain of metallo-dependent hydrolases Metallo-dependent hydrolases 117
P-loop containing nucleoside triphosphate hydrolases Translation proteins 117
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 119
PYP-like sensor domain (PAS domain) EAL domain-like 119
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 116
"Winged helix" DNA-binding domain PLP-dependent transferases 101
2Fe-2S ferredoxin-like Ferredoxin reductase-like, C-terminal NADP-linked domain 104
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 102
ISP domain Bet v1-like 103
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 93
HAD-like Calcium ATPase, transmembrane domain M 97
PreATP-grasp domain Rudiment single hybrid motif 93
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheY-like 99
2Fe-2S ferredoxin-like Riboflavin synthase domain-like 93
"Winged helix" DNA-binding domain Dimeric alpha+beta barrel 81
cAMP-binding domain-like "Winged helix" DNA-binding domain 82
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 86
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 83
Calcium ATPase, transduction domain A HAD-like 86
2Fe-2S ferredoxin-like CO dehydrogenase ISP C-domain like 72
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 75
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 73
Homodimeric domain of signal transducing histidine kinase CheY-like 77
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 74
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 72
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 75
Homeodomain-like Homeodomain-like 74
Formate dehydrogenase/DMSO reductase, domains 1-3 ADC-like 64
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 65
P-loop containing nucleoside triphosphate hydrolases MOP-like 51
CheY-like Homeodomain-like 52
"Winged helix" DNA-binding domain Chorismate lyase-like 51
Glutathione synthetase ATP-binding domain-like Single hybrid motif 52
Translation proteins EF-G C-terminal domain-like 53
RmlC-like cupins Homeodomain-like 52
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 53
Rudiment single hybrid motif Single hybrid motif 52
PreATP-grasp domain Single hybrid motif 52
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 53
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein S5 domain 2-like 54
Enolase N-terminal domain-like Enolase C-terminal domain-like 51
PYP-like sensor domain (PAS domain) CheY-like 55
ClpP/crotonase ClpP/crotonase 52
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 51
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 53
Phospholipase D/nuclease Phospholipase D/nuclease 54
Alpha-L RNA-binding motif Pseudouridine synthase 53
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 53
CO dehydrogenase molybdoprotein N-domain-like Molybdenum cofactor-binding domain 52
CheY-like P-loop containing nucleoside triphosphate hydrolases 42
HAMP domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 42
PYP-like sensor domain (PAS domain) Methyl-accepting chemotaxis protein (MCP) signaling domain 42
Aldolase post-HMGL domain-like 42
ClpP/crotonase 6-phosphogluconate dehydrogenase C-terminal domain-like 42
Aspartate/glutamate racemase Aspartate/glutamate racemase 41
HAMP domain-like Homodimeric domain of signal transducing histidine kinase 42
ClpP/crotonase NAD(P)-binding Rossmann-fold domains 42
EF-G C-terminal domain-like EF-G C-terminal domain-like 42
HlyD-like secretion proteins HlyD-like secretion proteins 42
Triger factor/SurA peptide-binding domain-like FKBP-like 44
HCP-like HCP-like 44
CheY-like Histidine-containing phosphotransfer domain, HPT domain 44
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 44
ACT-like ACT-like 44
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 44
PurM N-terminal domain-like PurM C-terminal domain-like 42
6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 42
Histidine-containing phosphotransfer domain, HPT domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 44
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 43
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 33
MurCD N-terminal domain MurD-like peptide ligases, peptide-binding domain 32
Metallo-dependent phosphatases 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain 32
Sensory domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 33
CBS-domain pair FAD-binding/transporter-associated domain-like 31
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 31
HMA, heavy metal-associated domain HAD-like 33
Nudix "Winged helix" DNA-binding domain 32
GAF domain-like EAL domain-like 33
Trypsin-like serine proteases PDZ domain-like 32
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 32
GAF domain-like Nucleotide cyclase 33
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 31
Nucleotidyltransferase HD-domain/PDEase-like 32
P-loop containing nucleoside triphosphate hydrolases Restriction endonuclease-like 33
LeuD/IlvD-like Aconitase iron-sulfur domain 33
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 32
Nucleic acid-binding proteins Nucleic acid-binding proteins 33
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 32
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 32
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 33
EF-G C-terminal domain-like Ribosomal protein S5 domain 2-like 32
Sensory domain-like Homodimeric domain of signal transducing histidine kinase 33
EspE N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 33
MetI-like MetI-like 32
Nucleotidyltransferase ACT-like 32
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 33
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 32
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 31
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 31
Nucleic acid-binding proteins RuvA domain 2-like 33
Histidine-containing phosphotransfer domain, HPT domain Homodimeric domain of signal transducing histidine kinase 33
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 31
HD-domain/PDEase-like ACT-like 32
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 31
MurCD N-terminal domain MurD-like peptide ligases, catalytic domain 32
FAD/NAD(P)-binding domain FMN-linked oxidoreductases 33
Lysozyme-like beta-lactamase/transpeptidase-like 33
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 32
Class II aaRS and biotin synthetases Class II aaRS ABD-related 33
GAF domain-like Homeodomain-like 32
Resolvase-like Homeodomain-like 31
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 33
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 33
FAD-binding/transporter-associated domain-like CO dehydrogenase flavoprotein C-terminal domain-like 32
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 32
Class I glutamine amidotransferase-like Homeodomain-like 32
Translation proteins Ribosomal protein S5 domain 2-like 21
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 21
Single hybrid motif Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 22
FAD/NAD(P)-binding domain HI0933 insert domain-like 21
Glutathione synthetase ATP-binding domain-like MurD-like peptide ligases, catalytic domain 22
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 22
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 22
CheY-like Nucleotide cyclase 22
TGS-like ACT-like 21
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 22
CheY-like EAL domain-like 22
Nucleic acid-binding proteins Translation proteins SH3-like domain 22
PDZ domain-like PDZ domain-like 21
NagB/RpiA/CoA transferase-like NagB/RpiA/CoA transferase-like 21
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 21
L30e-like alpha/beta knot 21
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 22
Class II aaRS and biotin synthetases ThrRS/AlaRS common domain 22
Ribonuclease H-like DNA/RNA polymerases 22
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 21
Cupredoxins Cupredoxins 22
TPR-like TPR-like 22
MoeA N-terminal region -like Molybdenum cofactor biosynthesis proteins 21
PYP-like sensor domain (PAS domain) P-loop containing nucleoside triphosphate hydrolases 22
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 21
Metal cation-transporting ATPase, ATP-binding domain N Calcium ATPase, transmembrane domain M 21
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 22
FAD/NAD(P)-binding domain Thioredoxin-like 22
Adenine nucleotide alpha hydrolases-like DHS-like NAD/FAD-binding domain 21
tRNA-binding arm Class II aaRS and biotin synthetases 21
PYP-like sensor domain (PAS domain) C-terminal effector domain of the bipartite response regulators 22
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 22
Calcium ATPase, transduction domain A Metal cation-transporting ATPase, ATP-binding domain N 21
Homeodomain-like SIS domain 21
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 22
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 22
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 21
Carbon-nitrogen hydrolase Adenine nucleotide alpha hydrolases-like 21
Sensory domain-like Nucleotide cyclase 22
post-HMGL domain-like 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 21
2Fe-2S ferredoxin-like Formate dehydrogenase/DMSO reductase, domains 1-3 22
Metal cation-transporting ATPase, ATP-binding domain N HAD-like 21
Cryptochrome/photolyase, N-terminal domain Cryptochrome/photolyase FAD-binding domain 22
6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 21
EAL domain-like HD-domain/PDEase-like 21
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
Quinoprotein alcohol dehydrogenase-like Cytochrome c 22
NAD(P)-binding Rossmann-fold domains Isocitrate/Isopropylmalate dehydrogenase-like 21
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheW-like 22
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
NAD(P)-binding Rossmann-fold domains ACT-like 22
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 22
4Fe-4S ferredoxins Formate dehydrogenase/DMSO reductase, domains 1-3 22
Nucleotidyltransferase Nucleotidyltransferase substrate binding subunit/domain 22
Nqo1 middle domain-like Nqo1C-terminal domain-like 22
P-loop containing nucleoside triphosphate hydrolases Hypothetical protein YjiA, C-terminal domain 21
Rhodanese/Cell cycle control phosphatase Rhodanese/Cell cycle control phosphatase 22
PYP-like sensor domain (PAS domain) Homeodomain-like 22
Nqo1 FMN-binding domain-like Nqo1C-terminal domain-like 22
Aminoacid dehydrogenase-like, N-terminal domain Isocitrate/Isopropylmalate dehydrogenase-like 21
MoeA N-terminal region -like MoeA C-terminal domain-like 21
Sensory domain-like Sensory domain-like 22
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 22
Molybdenum cofactor-binding domain Molybdenum cofactor-binding domain 21
Diaminopimelate epimerase-like Diaminopimelate epimerase-like 21
GreA transcript cleavage protein, N-terminal domain FKBP-like 22
HD-domain/PDEase-like TGS-like 21
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 22
NAD(P)-binding Rossmann-fold domains UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 21
DsbC/DsbG N-terminal domain-like Thioredoxin-like 22
Cytochrome c oxidase subunit II-like, transmembrane region Cupredoxins 22
lambda integrase-like, N-terminal domain DNA breaking-rejoining enzymes 21
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 21
Nucleotidyltransferase Poly A polymerase C-terminal region-like 21
Molybdenum cofactor biosynthesis proteins MoeA C-terminal domain-like 21
Nqo1 FMN-binding domain-like Nqo1 middle domain-like 22
Penicillin binding protein dimerisation domain beta-lactamase/transpeptidase-like 22
Oxidoreductase molybdopterin-binding domain E set domains 21
ParB/Sulfiredoxin KorB DNA-binding domain-like 22
HMA, heavy metal-associated domain HMA, heavy metal-associated domain 22
HAMP domain-like Nucleotide cyclase 22
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 22
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 22
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex CoA-dependent acyltransferases 22
TrkA C-terminal domain-like TrkA C-terminal domain-like 22
Chaperone J-domain HSP40/DnaJ peptide-binding domain 22
PLP-binding barrel Alanine racemase C-terminal domain-like 21
2Fe-2S ferredoxin-like 4Fe-4S ferredoxins 22
Histidine-containing phosphotransfer domain, HPT domain CheW-like 22
Nucleotidyltransferase TGS-like 21
Single hybrid motif CoA-dependent acyltransferases 22
Thioredoxin-like Thioredoxin-like 22
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
PYP-like sensor domain (PAS domain) GAF domain-like 22
Tryptophan synthase beta subunit-like PLP-dependent enzymes ACT-like 22
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 21
GAF domain-like P-loop containing nucleoside triphosphate hydrolases 22
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain "Winged helix" DNA-binding domain 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
Prokaryotic type KH domain (KH-domain type II) Rad51 N-terminal domain-like 11
PDZ domain-like ClpP/crotonase 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
Nucleotide-diphospho-sugar transferases EspE N-terminal domain-like 11
NAD(P)-binding Rossmann-fold domains Glutamyl tRNA-reductase dimerization domain 11
Homeodomain-like Ribonuclease H-like 11
Epsilon subunit of F1F0-ATP synthase N-terminal domain Epsilon subunit of F1F0-ATP synthase C-terminal domain 11
FAD/NAD(P)-binding domain Nitrite/Sulfite reductase N-terminal domain-like 11
FKBP-like FKBP-like 11
Chemotaxis receptor methyltransferase CheR, N-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 11
UROD/MetE-like UROD/MetE-like 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
Galactose-binding domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
2Fe-2S ferredoxin-like CO dehydrogenase flavoprotein C-terminal domain-like 11
FAD/NAD(P)-binding domain Nitrite and sulphite reductase 4Fe-4S domain-like 11
Class II aaRS and biotin synthetases GAD domain-like 11
Adenine nucleotide alpha hydrolases-like Adenine nucleotide alpha hydrolases-like 11
YbaK/ProRS associated domain Class II aaRS ABD-related 11
Cytochrome P450 2Fe-2S ferredoxin-like 11
Methylated DNA-protein cysteine methyltransferase domain Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
DNA ligase/mRNA capping enzyme, catalytic domain RuvA domain 2-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FMN-linked oxidoreductases 11
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 11
Methionine synthase domain Cobalamin (vitamin B12)-binding domain 11
P-loop containing nucleoside triphosphate hydrolases CarD-like 11
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 11
Translation proteins Initiation factor IF2/eIF5b, domain 3 11
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 11
Thioredoxin-like Nqo1C-terminal domain-like 11
Zinc beta-ribbon DNA primase core 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 11
Nucleotidylyl transferase tRNA-binding arm 11
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 11
Translation proteins PRC-barrel domain 11
PurM C-terminal domain-like Class I glutamine amidotransferase-like 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphohistidine domain 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 11
Homeodomain-like Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 11
Elongation factor Ts (EF-Ts), dimerisation domain Elongation factor Ts (EF-Ts), dimerisation domain 11
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 11
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 11
S-adenosylmethionine decarboxylase S-adenosyl-L-methionine-dependent methyltransferases 11
GAF domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Actin-like ATPase domain HD-domain/PDEase-like 11
Urease metallochaperone UreE, N-terminal domain Urease metallochaperone UreE, C-terminal domain 11
RNase III domain-like dsRNA-binding domain-like 11
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 11
Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 11
Carbamate kinase-like PUA domain-like 11
Hsp33 domain HSP33 redox switch-like 11
2Fe-2S ferredoxin-like FAD-binding/transporter-associated domain-like 11
Cytidine deaminase-like alpha/beta-Hydrolases 11
YrdC/RibB RibA-like 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Nucleic acid-binding proteins 11
Nucleotidyltransferase substrate binding subunit/domain Nucleotidyltransferase substrate binding subunit/domain 11
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 11
Dihydropteroate synthetase-like Methionine synthase domain 11
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 11
PH0987 N-terminal domain-like Cyclophilin-like 11
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleotidylyl transferase 11
SMAD/FHA domain SMAD/FHA domain 11
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 11
Rudiment single hybrid motif ClpP/crotonase 11
Class II aaRS and biotin synthetases Translation proteins 11
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 11
Eukaryotic type KH-domain (KH-domain type I) Nucleic acid-binding proteins 11
FGAM synthase PurL, linker domain PurM N-terminal domain-like 11
Nucleotidyltransferase substrate binding subunit/domain HD-domain/PDEase-like 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
ArfGap/RecO-like zinc finger Pyridoxine 5'-phosphate synthase 11
Cytochrome c oxidase subunit II-like, transmembrane region OmpA-like 11
Globin-like Nucleotide cyclase 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
Nucleic acid-binding proteins Thioesterase/thiol ester dehydrase-isomerase 11
5' to 3' exonuclease, C-terminal subdomain DNA/RNA polymerases 11
Sm-like ribonucleoproteins Mechanosensitive channel protein MscS (YggB), C-terminal domain 11
DNA methylase specificity domain DNA methylase specificity domain 11
Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases 11
YegP-like YegP-like 11
P-loop containing nucleoside triphosphate hydrolases Homodimeric domain of signal transducing histidine kinase 11
Methionine synthase domain Methionine synthase activation domain-like 11
Glutathione synthetase ATP-binding domain-like ClpP/crotonase 11
Adenine nucleotide alpha hydrolases-like GAF domain-like 11
Thioredoxin-like Nqo1 middle domain-like 11
PreATP-grasp domain Methylglyoxal synthase-like 11
NagB/RpiA/CoA transferase-like D-ribose-5-phosphate isomerase (RpiA), lid domain 11
PrpR receptor domain-like PYP-like sensor domain (PAS domain) 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleic acid-binding proteins 11
Rad51 N-terminal domain-like Rad51 N-terminal domain-like 11
MFS general substrate transporter Glycerol-3-phosphate (1)-acyltransferase 11
Cyclophilin-like Cyclophilin-like 11
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 11
RuvA domain 2-like BRCT domain 11
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 11
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 11
PUA domain-like Ribosomal protein S5 domain 2-like 11
lambda repressor-like DNA-binding domains P-loop containing nucleoside triphosphate hydrolases 11
FMN-linked oxidoreductases Nucleotide-binding domain 11
GroEL equatorial domain-like GroEL apical domain-like 11
PA2201 N-terminal domain-like PA2201 C-terminal domain-like 11
Nitrite/Sulfite reductase N-terminal domain-like Nitrite/Sulfite reductase N-terminal domain-like 11
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 11
Putative DNA-binding domain P-loop containing nucleoside triphosphate hydrolases 11
Single hybrid motif FAD/NAD(P)-binding domain 11
PheT/TilS domain Anticodon-binding domain of PheRS 11
Lysozyme-like LysM domain 11
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 11
GroES-like GroES-like 11
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 11
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 11
2Fe-2S ferredoxin-like alpha-helical ferredoxin 11
Glutathione synthetase ATP-binding domain-like Phosphoenolpyruvate/pyruvate domain 11
Cytochrome P450 Ferredoxin reductase-like, C-terminal NADP-linked domain 11
Regulatory protein AraC Homeodomain-like 11
Cobalamin (vitamin B12)-binding domain Methionine synthase activation domain-like 11
Sigma3 and sigma4 domains of RNA polymerase sigma factors NTF2-like 11
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 11
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 11
Cupredoxins Cytochrome c 11
Nucleic acid-binding proteins NAD(P)-binding Rossmann-fold domains 11
PreATP-grasp domain ClpP/crotonase 11
Translation proteins "Winged helix" DNA-binding domain 11
PIN domain-like P-loop containing nucleoside triphosphate hydrolases 11
Nucleotide-binding domain Nucleotide-binding domain 11
Putative DNA-binding domain Anticodon-binding domain of PheRS 11
Glutathione synthetase ATP-binding domain-like MurD-like peptide ligases, peptide-binding domain 11
EPT/RTPC-like P-loop containing nucleoside triphosphate hydrolases 11
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 11
TolB, N-terminal domain Tricorn protease N-terminal domain 11
Periplasmic binding protein-like II ACT-like 11
"Winged helix" DNA-binding domain FMN-dependent nitroreductase-like 11
Nucleotidylyl transferase YegP-like 11
"Winged helix" DNA-binding domain LexA/Signal peptidase 11
Nucleotidylyl transferase Nudix 11
Nucleotidylyl transferase Riboflavin kinase-like 11
4Fe-4S ferredoxins Respiratory nitrate reductase 1 gamma chain 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Alpha subunit of glutamate synthase, C-terminal domain 11
Histidine-containing phosphotransfer domain, HPT domain Histidine-containing phosphotransfer domain, HPT domain 11
R1 subunit of ribonucleotide reductase, N-terminal domain PFL-like glycyl radical enzymes 11
PrpR receptor domain-like P-loop containing nucleoside triphosphate hydrolases 11
Ribosomal protein S5 domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
Class I glutamine amidotransferase-like LD-carboxypeptidase A C-terminal domain-like 11
HprK N-terminal domain-like PEP carboxykinase-like 11
Cytochrome P450 Riboflavin synthase domain-like 11
Putative DNA-binding domain Translation proteins 11
S13-like H2TH domain Glucocorticoid receptor-like (DNA-binding domain) 11
(Trans)glycosidases Glycoside hydrolase/deacetylase 11
PurS-like Class I glutamine amidotransferase-like 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
Lysozyme-like PGBD-like 11
Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase NM domain-like 11
Globin-like PYP-like sensor domain (PAS domain) 11
Macro domain-like Zn-dependent exopeptidases 11
N-terminal domain of MutM-like DNA repair proteins Glucocorticoid receptor-like (DNA-binding domain) 11
FMN-linked oxidoreductases Alpha subunit of glutamate synthase, C-terminal domain 11
"Winged helix" DNA-binding domain MOP-like 11
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 11
Aconitase B, N-terminal domain Aconitase iron-sulfur domain 11
FGAM synthase PurL, linker domain PurM C-terminal domain-like 11
PurS-like PurM N-terminal domain-like 11
Ribonuclease H-like RuvA domain 2-like 11
"Winged helix" DNA-binding domain Acyl-CoA N-acyltransferases (Nat) 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain ACT-like 11
PUA domain-like alpha/beta knot 11
Globin-like EAL domain-like 11
UraD-Like Zn-dependent exopeptidases 11
ParB/Sulfiredoxin C-terminal domain of transcriptional repressors 11
Sensory domain-like CheY-like 11
Ribosomal protein S5 domain 2-like HSP90 C-terminal domain 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 11
FGAM synthase PurL, linker domain Class I glutamine amidotransferase-like 11
P-loop containing nucleoside triphosphate hydrolases C-terminal UvrC-binding domain of UvrB 11
Glutathione synthetase ATP-binding domain-like Succinyl-CoA synthetase domains 11
ACT-like Formyltransferase 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11
CO dehydrogenase ISP C-domain like FAD-binding/transporter-associated domain-like 11
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 11
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 11
Glucocorticoid receptor-like (DNA-binding domain) P-loop containing nucleoside triphosphate hydrolases 11
DinB/YfiT-like putative metalloenzymes C-type lectin-like 11
Acyl-CoA N-acyltransferases (Nat) FKBP-like 11
Dihydropteroate synthetase-like Methionine synthase activation domain-like 11
Nucleic acid-binding proteins DNA helicase RuvA subunit, C-terminal domain 11
Homeodomain-like Methylated DNA-protein cysteine methyltransferase domain 11
HCP-like Lysozyme-like 11
PrpR receptor domain-like Homeodomain-like 11
Nudix Metallo-hydrolase/oxidoreductase 11
GIY-YIG endonuclease RuvA domain 2-like 11
PPK N-terminal domain-like Phospholipase D/nuclease 11
S-adenosyl-L-methionine-dependent methyltransferases PRTase-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 11
Nucleic acid-binding proteins PheT/TilS domain 11
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 11
P-loop containing nucleoside triphosphate hydrolases Adenine nucleotide alpha hydrolases-like 11
FAD-linked oxidases, C-terminal domain alpha-helical ferredoxin 11
Aconitase B, N-terminal domain LeuD/IlvD-like 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
Nucleotide-binding domain FAD/NAD(P)-binding domain 11
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Transcription factor NusA, N-terminal domain Nucleic acid-binding proteins 11
GroEL-intermediate domain like GroEL apical domain-like 11
PapD-like Periplasmic chaperone C-domain 11
RuvA domain 2-like RuvA domain 2-like 11
4Fe-4S ferredoxins ADC-like 11
FliG FliG 11
Ribosomal protein L6 Ribosomal protein L6 11
Nucleic acid-binding proteins Putative DNA-binding domain 11
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
alpha-helical ferredoxin Nucleotide-binding domain 11
DnaK suppressor protein DksA, alpha-hairpin domain Glucocorticoid receptor-like (DNA-binding domain) 11
YajQ-like YajQ-like 11
P-loop containing nucleoside triphosphate hydrolases TGS-like 11
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 11
Cytochrome c oxidase subunit II-like, transmembrane region Cytochrome c 11
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 11
2Fe-2S ferredoxin-like ADC-like 11
FAD-linked reductases, C-terminal domain 4Fe-4S ferredoxins 11
Adenine nucleotide alpha hydrolases-like Homodimeric domain of signal transducing histidine kinase 11
PEP carboxykinase N-terminal domain PEP carboxykinase-like 11
Metalloproteases ("zincins"), catalytic domain PDZ domain-like 11
Globin-like Riboflavin synthase domain-like 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 11
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 11
Dihydropteroate synthetase-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
Translation proteins ThrRS/AlaRS common domain 11
Leukotriene A4 hydrolase N-terminal domain Metalloproteases ("zincins"), catalytic domain 11
PheT/TilS domain Class II aaRS and biotin synthetases 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
PHP14-like Phospholipase D/nuclease 11
Rho N-terminal domain-like Nucleic acid-binding proteins 11
Tetrapyrrole methylase S-adenosyl-L-methionine-dependent methyltransferases 11
4Fe-4S ferredoxins Riboflavin synthase domain-like 11
FAD-binding/transporter-associated domain-like Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain 11
CheC-like Surface presentation of antigens (SPOA) 11
CheY-like CheY-like 11
lambda repressor-like DNA-binding domains Periplasmic binding protein-like I 11
Domain of the SRP/SRP receptor G-proteins Signal peptide-binding domain 11
Nucleic acid-binding proteins Pyridoxine 5'-phosphate synthase 11
Nucleic acid-binding proteins Rad51 N-terminal domain-like 11
AhpD-like AhpD-like 11
PYP-like sensor domain (PAS domain) Histidine-containing phosphotransfer domain, HPT domain 11
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
Putative DNA-binding domain Initiation factor IF2/eIF5b, domain 3 11
Ligand-binding domain in the NO signalling and Golgi transport P-loop containing nucleoside triphosphate hydrolases 11
Nucleotide-binding domain FAD-linked reductases, C-terminal domain 11
Single hybrid motif ClpP/crotonase 11
lambda repressor-like DNA-binding domains RmlC-like cupins 11
Prokaryotic type KH domain (KH-domain type II) Prokaryotic type KH domain (KH-domain type II) 11
Nucleic acid-binding proteins GAD domain-like 11
NAD(P)-binding Rossmann-fold domains TrkA C-terminal domain-like 11
PurS-like FGAM synthase PurL, linker domain 11
Nucleic acid-binding proteins S-adenosyl-L-methionine-dependent methyltransferases 11
Nitrite and sulphite reductase 4Fe-4S domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
CO dehydrogenase ISP C-domain like CO dehydrogenase flavoprotein C-terminal domain-like 11
Homodimeric domain of signal transducing histidine kinase CheW-like 11
N-terminal domain of DnaB helicase P-loop containing nucleoside triphosphate hydrolases 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
Methylglyoxal synthase-like Methylglyoxal synthase-like 11
Nucleic acid-binding proteins ArfGap/RecO-like zinc finger 11
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 11
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
TGS-like Class II aaRS ABD-related 11
PIN domain-like Ribonuclease H-like 11
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 11
Adenine nucleotide alpha hydrolases-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
HD-domain/PDEase-like P-loop containing nucleoside triphosphate hydrolases 11
NAD-binding domain of HMG-CoA reductase Substrate-binding domain of HMG-CoA reductase 11
Thioesterase/thiol ester dehydrase-isomerase Thioesterase/thiol ester dehydrase-isomerase 11
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 11
Glutamyl tRNA-reductase catalytic, N-terminal domain Glutamyl tRNA-reductase dimerization domain 11
Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), C-terminal domain 11
Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha) Thioredoxin-like 11
C-terminal UvrC-binding domain of UvrB RuvA domain 2-like 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphoenolpyruvate/pyruvate domain 11
Sensory domain-like PYP-like sensor domain (PAS domain) 11
PLP-dependent transferases PLP-dependent transferases 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase HSP90 C-terminal domain 11
PheT/TilS domain Putative DNA-binding domain 11
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 11
Transcription factor NusA, N-terminal domain Rad51 N-terminal domain-like 11
a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 11
Homo-oligomeric flavin-containing Cys decarboxylases, HFCD CoaB-like 11
Nucleic acid-binding proteins Anticodon-binding domain of PheRS 11
Nucleotidyltransferase Nucleotidyltransferase 11
Chorismate mutase II ACT-like 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
P-loop containing nucleoside triphosphate hydrolases HRDC-like 11
Zinc beta-ribbon Prokaryotic SH3-related domain 11
CheW-like CheY-like 11
Riboflavin synthase domain-like Riboflavin synthase domain-like 11
Flavoproteins Riboflavin synthase domain-like 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
Thioesterase/thiol ester dehydrase-isomerase Acyl-CoA N-acyltransferases (Nat) 11
Transmembrane di-heme cytochromes a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 11
Pheromone-binding domain of LuxR-like quorum-sensing transcription factors C-terminal effector domain of the bipartite response regulators 11
"Winged helix" DNA-binding domain NagB/RpiA/CoA transferase-like 11
PreATP-grasp domain PreATP-grasp domain 11
DNA clamp DNA clamp 11
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 11
Translation proteins Translation proteins 11
RuvA domain 2-like DNA helicase RuvA subunit, C-terminal domain 11
Nucleic acid-binding proteins Prokaryotic type KH domain (KH-domain type II) 11
PLP-dependent transferases Ornithine decarboxylase C-terminal domain 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
Nucleotidylyl transferase Nucleic acid-binding proteins 11
Transcription factor NusA, N-terminal domain Prokaryotic type KH domain (KH-domain type II) 11
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 11
Single hybrid motif FAD/NAD-linked reductases, dimerisation (C-terminal) domain 11
Ligand-binding domain in the NO signalling and Golgi transport Homeodomain-like 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 11
Cupredoxins OmpA-like 11
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 11
GIY-YIG endonuclease C-terminal UvrC-binding domain of UvrB 11
FAD/NAD(P)-binding domain 4Fe-4S ferredoxins 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 11
L9 N-domain-like Ribosomal protein L9 C-domain 11
UDP-Glycosyltransferase/glycogen phosphorylase Nucleotide-diphospho-sugar transferases 11
P-loop containing nucleoside triphosphate hydrolases ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
FAD-binding/transporter-associated domain-like alpha-helical ferredoxin 11
DNA-glycosylase Nudix 11
Methylglyoxal synthase-like Cytidine deaminase-like 11
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 11
Thiamin diphosphate-binding fold (THDP-binding) Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 11
Folate-binding domain Aminomethyltransferase beta-barrel domain 11
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 11
Class II aaRS and biotin synthetases YbaK/ProRS associated domain 11
Chelatase Thioredoxin-like 11
Adenine nucleotide alpha hydrolases-like MesJ substrate recognition domain-like 11
GAF domain-like Homodimeric domain of signal transducing histidine kinase 11
Pili subunits GspK insert domain-like 11
Bacterial muramidases Lysozyme-like 11
Nucleotidyltransferase substrate binding subunit/domain ACT-like 11
TrmE connector domain P-loop containing nucleoside triphosphate hydrolases 11
Acyl-CoA dehydrogenase C-terminal domain-like Acyl-CoA dehydrogenase C-terminal domain-like 11
P-loop containing nucleoside triphosphate hydrolases ACT-like 11
KorB DNA-binding domain-like C-terminal domain of transcriptional repressors 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Eukaryotic type KH-domain (KH-domain type I) 11
Sensory domain-like HAMP domain-like 11
GroEL equatorial domain-like GroEL-intermediate domain like 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Nucleic acid-binding proteins 11
P-loop containing nucleoside triphosphate hydrolases TrpR-like 11
MOSC N-terminal domain-like PK beta-barrel domain-like 11
NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains 11
5' to 3' exonuclease, C-terminal subdomain Ribonuclease H-like 11
Carbamate kinase-like ACT-like 11
Thiolase-like Heme oxygenase-like 11
Ribonuclease H-like Nucleic acid-binding proteins 11
Globin-like Ferredoxin reductase-like, C-terminal NADP-linked domain 11
E set domains alpha/beta-Hydrolases 11
PurM N-terminal domain-like Class I glutamine amidotransferase-like 11
Nucleic acid-binding proteins BRCT domain 11
HAMP domain-like PYP-like sensor domain (PAS domain) 11
Cadherin-like Cadherin-like 11
Thioredoxin-like Nqo1 FMN-binding domain-like 11
Ribonuclease PH domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
PPK N-terminal domain-like PHP14-like 11
UraD-Like Bacterial exopeptidase dimerisation domain 11
TGS-like Class II aaRS and biotin synthetases 11
Single hybrid motif Single hybrid motif 11
Fe-S cluster assembly (FSCA) domain-like P-loop containing nucleoside triphosphate hydrolases 11
Sigma2 domain of RNA polymerase sigma factors NTF2-like 11
Chaperone J-domain HSC20 (HSCB), C-terminal oligomerisation domain 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
Dihydropteroate synthetase-like Cobalamin (vitamin B12)-binding domain 11
Glutamyl tRNA-reductase catalytic, N-terminal domain NAD(P)-binding Rossmann-fold domains 11
Thioredoxin-like TPR-like 11
FAD-linked reductases, C-terminal domain Thioredoxin-like 11
Flavoproteins Ferredoxin reductase-like, C-terminal NADP-linked domain 11
TGS-like ThrRS/AlaRS common domain 11
Nucleotidylyl transferase Ribosomal protein L25-like 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
PIN domain-like DNA/RNA polymerases 11
CarD-like TRCF domain-like 11
RBP11-like subunits of RNA polymerase C-terminal domain of RNA polymerase alpha subunit 11
Fumarylacetoacetate hydrolase, FAH, N-terminal domain FAH 11
RuvA domain 2-like JAB1/MPN domain 11
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 11
Prokaryotic type I DNA topoisomerase SWIB/MDM2 domain 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
Chorismate mutase II Periplasmic binding protein-like II 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
PurS-like PurM C-terminal domain-like 11
Formyltransferase FMT C-terminal domain-like 11
N-terminal domain of bifunctional PutA protein FAD-linked oxidoreductase 11
Formate/glycerate dehydrogenase catalytic domain-like ACT-like 11
FMN-binding split barrel "Winged helix" DNA-binding domain 11
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 11
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 11
Trigger factor ribosome-binding domain FKBP-like 11
4Fe-4S ferredoxins Ferredoxin reductase-like, C-terminal NADP-linked domain 11
P-loop containing nucleoside triphosphate hydrolases (Phosphotyrosine protein) phosphatases II 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 11
L domain-like Protein kinase-like (PK-like) 11
Glutamine synthetase/guanido kinase GatB/YqeY motif 11
PK beta-barrel domain-like PK C-terminal domain-like 11
Carbamate kinase-like Acyl-CoA N-acyltransferases (Nat) 11
P-loop containing nucleoside triphosphate hydrolases CBS-domain pair 11
CheY-like Methylesterase CheB, C-terminal domain 11
vWA-like beta-Roll 11
Cytidine deaminase-like Dihydrofolate reductase-like 11
Rho N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
Cobalamin (vitamin B12)-dependent enzymes Cobalamin (vitamin B12)-binding domain 11
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Cytochrome c OmpA-like 11
Heme-dependent peroxidases Heme-dependent peroxidases 11

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