SUPERFAMILY 1.75 HMM library and genome assignments server

Domain combination pairs in Acidovorax avenae subsp. avenae ATCC 19860

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

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Adjacent domain pairs graph

Graph of adjacent domain pairs.


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Domain combination pairs

775 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
"Winged helix" DNA-binding domain Periplasmic binding protein-like II 891
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 5629
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 3514
CheY-like C-terminal effector domain of the bipartite response regulators 284
Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase C-terminal domain-like 223
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 223
PYP-like sensor domain (PAS domain) PYP-like sensor domain (PAS domain) 2217
PYP-like sensor domain (PAS domain) Nucleotide cyclase 2113
Nucleotide cyclase EAL domain-like 2012
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 1915
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheY-like 1916
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 1915
Homodimeric domain of signal transducing histidine kinase CheY-like 1815
"Winged helix" DNA-binding domain GAF domain-like 173
Homeodomain-like Tetracyclin repressor-like, C-terminal domain 162
Actin-like ATPase domain Actin-like ATPase domain 167
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 164
Thioredoxin-like GST C-terminal domain-like 153
"Winged helix" DNA-binding domain Dimeric alpha+beta barrel 141
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 145
"Winged helix" DNA-binding domain GntR ligand-binding domain-like 133
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 135
PYP-like sensor domain (PAS domain) EAL domain-like 138
Thiolase-like Thiolase-like 131
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 124
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 127
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 123
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB transmembrane domain 124
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB transmembrane domain 124
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 124
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 124
GroES-like NAD(P)-binding Rossmann-fold domains 122
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 125
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 114
PYP-like sensor domain (PAS domain) CheY-like 119
Homeodomain-like Homeodomain-like 105
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 102
P-loop containing nucleoside triphosphate hydrolases MOP-like 101
Composite domain of metallo-dependent hydrolases Metallo-dependent hydrolases 106
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 105
Cytochrome c Cytochrome c 106
P-loop containing nucleoside triphosphate hydrolases Translation proteins 95
HAMP domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 95
Phage tail proteins gp5 N-terminal domain-like 83
PreATP-grasp domain Rudiment single hybrid motif 82
Phage tail proteins Phage tail proteins 83
gp5 N-terminal domain-like Phage fibre proteins 83
CheY-like Homeodomain-like 83
Phage tail proteins Phage fibre proteins 83
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 82
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 84
GAF domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 88
cAMP-binding domain-like "Winged helix" DNA-binding domain 81
"Winged helix" DNA-binding domain PLP-dependent transferases 71
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 72
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 74
HAMP domain-like Homodimeric domain of signal transducing histidine kinase 73
GAF domain-like Homodimeric domain of signal transducing histidine kinase 77
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 75
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 62
Phospholipase D/nuclease Phospholipase D/nuclease 64
CheY-like P-loop containing nucleoside triphosphate hydrolases 62
Enolase N-terminal domain-like Enolase C-terminal domain-like 61
Acetyl-CoA synthetase-like ACP-like 66
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 65
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Histidine-containing phosphotransfer domain, HPT domain 66
Alpha-L RNA-binding motif Pseudouridine synthase 62
lambda repressor-like DNA-binding domains Periplasmic binding protein-like I 61
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 54
Translation proteins EF-G C-terminal domain-like 53
ACT-like ACT-like 54
Chemotaxis receptor methyltransferase CheR, N-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 52
Formate dehydrogenase/DMSO reductase, domains 1-3 ADC-like 53
PYP-like sensor domain (PAS domain) GAF domain-like 55
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein S5 domain 2-like 54
CoA-dependent acyltransferases ACP-like 55
CoA-dependent acyltransferases CoA-dependent acyltransferases 55
GAF domain-like Nucleotide cyclase 54
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 53
Homodimeric domain of signal transducing histidine kinase Histidine-containing phosphotransfer domain, HPT domain 55
CoA-dependent acyltransferases Acetyl-CoA synthetase-like 55
Triger factor/SurA peptide-binding domain-like FKBP-like 55
Regulatory protein AraC Homeodomain-like 52
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 41
HAD-like Calcium ATPase, transmembrane domain M 44
Homeodomain-like SIS domain 41
PreATP-grasp domain Single hybrid motif 41
EF-G C-terminal domain-like EF-G C-terminal domain-like 42
Calcium ATPase, transduction domain A HAD-like 44
GAF domain-like CheY-like 44
ClpP/crotonase ClpP/crotonase 41
CBS-domain pair FAD-binding/transporter-associated domain-like 42
Rudiment single hybrid motif Single hybrid motif 41
EspE N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 42
Glutathione synthetase ATP-binding domain-like Single hybrid motif 41
Sensory domain-like Methyl-accepting chemotaxis protein (MCP) signaling domain 41
2Fe-2S ferredoxin-like CO dehydrogenase ISP C-domain like 42
Molybdenum cofactor-binding domain CO dehydrogenase molybdoprotein N-domain-like 42
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 43
Phage fibre proteins Phage fibre proteins 42
RmlC-like cupins Homeodomain-like 43
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 44
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 44
CheY-like Histidine-containing phosphotransfer domain, HPT domain 44
GAF domain-like EAL domain-like 43
6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 43
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 42
MurCD N-terminal domain MurD-like peptide ligases, catalytic domain 32
6-phosphogluconate dehydrogenase C-terminal domain-like ClpP/crotonase 32
FAD-binding/transporter-associated domain-like CO dehydrogenase flavoprotein C-terminal domain-like 32
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 32
"Winged helix" DNA-binding domain Chorismate lyase-like 31
beta-Roll beta-Roll 33
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 32
(Trans)glycosidases Glycosyl hydrolase domain 33
Trypsin-like serine proteases PDZ domain-like 32
Sm-like ribonucleoproteins Mechanosensitive channel protein MscS (YggB), C-terminal domain 31
Methylesterase CheB, C-terminal domain CheY-like 32
Ribosomal protein S5 domain 2-like EF-G C-terminal domain-like 32
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 33
Nucleic acid-binding proteins RuvA domain 2-like 33
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 31
Nucleotidyltransferase HD-domain/PDEase-like 32
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 33
ISP domain Bet v1-like 31
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 33
CheY-like CheY-like 33
Sensory domain-like Homodimeric domain of signal transducing histidine kinase 32
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 33
Histidine-containing phosphotransfer domain, HPT domain CheW-like 33
TPR-like TPR-like 32
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 32
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 32
Nucleotide-diphospho-sugar transferases UDP-Glycosyltransferase/glycogen phosphorylase 33
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 33
Nucleotidyltransferase ACT-like 32
Succinyl-CoA synthetase domains Glutathione synthetase ATP-binding domain-like 33
NAD(P)-binding Rossmann-fold domains ClpP/crotonase 32
MurCD N-terminal domain MurD-like peptide ligases, peptide-binding domain 32
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheW-like 33
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 31
Aspartate/glutamate racemase Aspartate/glutamate racemase 31
HAMP domain-like Nucleotide cyclase 32
Sensory domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 32
Aconitase iron-sulfur domain LeuD/IlvD-like 33
Nucleic acid-binding proteins Nucleic acid-binding proteins 33
Lysozyme-like beta-lactamase/transpeptidase-like 33
Homodimeric domain of signal transducing histidine kinase CheW-like 33
Class II aaRS and biotin synthetases Class II aaRS ABD-related 33
Rhodanese/Cell cycle control phosphatase Rhodanese/Cell cycle control phosphatase 33
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 32
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 33
PurM N-terminal domain-like PurM C-terminal domain-like 32
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 31
FMN-linked oxidoreductases FAD/NAD(P)-binding domain 32
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 31
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Adenine nucleotide alpha hydrolases-like 31
HD-domain/PDEase-like ACT-like 32
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 31
Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), C-terminal domain 31
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 31
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 31
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 33
HAMP domain-like PYP-like sensor domain (PAS domain) 33
Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 32
GAF domain-like GAF domain-like 33
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 33
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 32
HAMP domain-like EAL domain-like 32
PYP-like sensor domain (PAS domain) Methyl-accepting chemotaxis protein (MCP) signaling domain 33
Nucleic acid-binding proteins Translation proteins SH3-like domain 22
lambda repressor-like DNA-binding domains RmlC-like cupins 21
Nucleotidyltransferase Poly A polymerase C-terminal region-like 21
NAD(P)-binding Rossmann-fold domains Isocitrate/Isopropylmalate dehydrogenase-like 21
Adenine nucleotide alpha hydrolases-like DHS-like NAD/FAD-binding domain 21
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 22
Acetyl-CoA synthetase-like Acetyl-CoA synthetase-like 22
S-adenosyl-L-methionine-dependent methyltransferases UDP-Glycosyltransferase/glycogen phosphorylase 22
NAD(P)-binding Rossmann-fold domains TrkA C-terminal domain-like 22
NAD(P)-binding Rossmann-fold domains Glutathione synthetase ATP-binding domain-like 22
DNA methylase specificity domain DNA methylase specificity domain 21
Calcium ATPase, transduction domain A Metal cation-transporting ATPase, ATP-binding domain N 22
CheW-like CheW-like 21
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 21
NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains 22
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 22
Single hybrid motif CoA-dependent acyltransferases 22
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
Molybdenum cofactor biosynthesis proteins MoeA C-terminal domain-like 21
P-loop containing nucleoside triphosphate hydrolases Tropomyosin 22
NAD(P)-binding Rossmann-fold domains ACT-like 22
Single hybrid motif Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 22
HMA, heavy metal-associated domain HAD-like 22
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 22
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphohistidine domain 22
2Fe-2S ferredoxin-like Riboflavin synthase domain-like 21
Epsilon subunit of F1F0-ATP synthase N-terminal domain Epsilon subunit of F1F0-ATP synthase C-terminal domain 21
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex CoA-dependent acyltransferases 22
Metallo-dependent phosphatases 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain 22
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 22
FAD/NAD(P)-binding domain HI0933 insert domain-like 21
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 22
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 21
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 21
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 22
PYP-like sensor domain (PAS domain) Histidine-containing phosphotransfer domain, HPT domain 22
alpha-helical ferredoxin Nucleotide-binding domain 21
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 21
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 22
2Fe-2S ferredoxin-like Ferredoxin reductase-like, C-terminal NADP-linked domain 21
Class II aaRS and biotin synthetases ThrRS/AlaRS common domain 22
HD-domain/PDEase-like TGS-like 21
Nucleotidyltransferase TGS-like 21
Cytochrome c oxidase subunit II-like, transmembrane region Cupredoxins 22
P-loop containing nucleoside triphosphate hydrolases ACT-like 21
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 22
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 22
Nucleotidyltransferase Nucleotidyltransferase substrate binding subunit/domain 22
Tryptophan synthase beta subunit-like PLP-dependent enzymes ACT-like 22
tRNA-binding arm Class II aaRS and biotin synthetases 21
Metal cation-transporting ATPase, ATP-binding domain N Calcium ATPase, transmembrane domain M 22
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 21
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 22
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 21
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 22
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 21
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 22
Cupredoxins Cupredoxins 22
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
MetI-like MetI-like 21
PDZ domain-like PDZ domain-like 21
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 22
Class I glutamine amidotransferase-like Homeodomain-like 22
MoeA N-terminal region -like Molybdenum cofactor biosynthesis proteins 21
4'-phosphopantetheinyl transferase 4'-phosphopantetheinyl transferase 21
GreA transcript cleavage protein, N-terminal domain FKBP-like 21
E set domains (Trans)glycosidases 22
Translation proteins Ribosomal protein S5 domain 2-like 21
Glutathione synthetase ATP-binding domain-like MurD-like peptide ligases, catalytic domain 22
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 22
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 21
HD-domain/PDEase-like P-loop containing nucleoside triphosphate hydrolases 22
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphoenolpyruvate/pyruvate domain 22
P-loop containing nucleoside triphosphate hydrolases Hypothetical protein YjiA, C-terminal domain 21
lambda integrase-like, N-terminal domain DNA breaking-rejoining enzymes 21
L30e-like alpha/beta knot 21
EAL domain-like HD-domain/PDEase-like 21
Carbon-nitrogen hydrolase Adenine nucleotide alpha hydrolases-like 21
MoeA N-terminal region -like MoeA C-terminal domain-like 21
GAF domain-like P-loop containing nucleoside triphosphate hydrolases 21
GAF domain-like Homeodomain-like 21
S-adenosyl-L-methionine-dependent methyltransferases Nucleotide-diphospho-sugar transferases 22
Macro domain-like Zn-dependent exopeptidases 21
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 22
HAMP domain-like Histidine-containing phosphotransfer domain, HPT domain 22
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 21
Translation proteins ThrRS/AlaRS common domain 22
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 22
NAD(P)-binding Rossmann-fold domains ACP-like 22
Aminoacid dehydrogenase-like, N-terminal domain Isocitrate/Isopropylmalate dehydrogenase-like 21
PLP-binding barrel Alanine racemase C-terminal domain-like 22
Succinyl-CoA synthetase domains Succinyl-CoA synthetase domains 22
Metal cation-transporting ATPase, ATP-binding domain N HAD-like 22
ACP-like ACP-like 22
Penicillin binding protein dimerisation domain beta-lactamase/transpeptidase-like 22
TGS-like ACT-like 21
PDZ domain-like ClpP/crotonase 22
PEP carboxykinase N-terminal domain PEP carboxykinase-like 11
PLP-dependent transferases PLP-dependent transferases 11
MOSC N-terminal domain-like PK beta-barrel domain-like 11
Putative DNA-binding domain Anticodon-binding domain of PheRS 11
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 11
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 11
Carbamate kinase-like ACT-like 11
Nucleic acid-binding proteins Prokaryotic type KH domain (KH-domain type II) 11
Sensory domain-like Histidine-containing phosphotransfer domain, HPT domain 11
Molybdenum cofactor-binding domain Cytochrome c 11
YjeF N-terminal domain-like Ribokinase-like 11
FAD/NAD(P)-binding domain Nitrite and sulphite reductase 4Fe-4S domain-like 11
Periplasmic binding protein-like II ACT-like 11
RBP11-like subunits of RNA polymerase C-terminal domain of RNA polymerase alpha subunit 11
Glutathione synthetase ATP-binding domain-like Acyl-CoA N-acyltransferases (Nat) 11
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 11
Methylated DNA-protein cysteine methyltransferase domain Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
AhpD-like AhpD-like 11
Cryptochrome/photolyase, N-terminal domain Cryptochrome/photolyase FAD-binding domain 11
Prokaryotic type KH domain (KH-domain type II) Prokaryotic type KH domain (KH-domain type II) 11
Nucleic acid-binding proteins Anticodon-binding domain of PheRS 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
Cupredoxins Cytochrome c 11
Tex N-terminal region-like Ribonuclease H-like 11
PIN domain-like Ribonuclease H-like 11
Nucleotidyltransferase substrate binding subunit/domain HD-domain/PDEase-like 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
EspE N-terminal domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 11
Transmembrane di-heme cytochromes a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 11
5' to 3' exonuclease, C-terminal subdomain DNA/RNA polymerases 11
Translation proteins Initiation factor IF2/eIF5b, domain 3 11
Adenine nucleotide alpha hydrolases-like MesJ substrate recognition domain-like 11
HlyD-like secretion proteins HlyD-like secretion proteins 11
alpha/beta-Hydrolases Galactose-binding domain-like 11
Starch-binding domain-like NHL repeat 11
HlyD-like secretion proteins OmpH-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 11
C-terminal effector domain of the bipartite response regulators HCP-like 11
PreATP-grasp domain Methylglyoxal synthase-like 11
Zinc beta-ribbon DNA primase core 11
HPr-like Phosphoenolpyruvate/pyruvate domain 11
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 11
S13-like H2TH domain Glucocorticoid receptor-like (DNA-binding domain) 11
CarD-like TRCF domain-like 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) DNA-glycosylase 11
Ribosomal protein S5 domain 2-like HSP90 C-terminal domain 11
Protein kinase-like (PK-like) Nucleotide cyclase 11
Nucleotidylyl transferase Riboflavin kinase-like 11
L9 N-domain-like Ribosomal protein L9 C-domain 11
ParB/Sulfiredoxin KorB DNA-binding domain-like 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
Carbamate kinase-like PUA domain-like 11
Metalloproteases ("zincins"), catalytic domain PDZ domain-like 11
Thioredoxin-like TPR-like 11
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 11
Flavoproteins Riboflavin synthase domain-like 11
MFS general substrate transporter CBS-domain pair 11
Cytidine deaminase-like alpha/beta-Hydrolases 11
Class II aaRS and biotin synthetases GAD domain-like 11
Single hybrid motif FAD/NAD-linked reductases, dimerisation (C-terminal) domain 11
RNase III domain-like dsRNA-binding domain-like 11
Tex N-terminal region-like RuvA domain 2-like 11
Methylesterase CheB, C-terminal domain Homodimeric domain of signal transducing histidine kinase 11
Histidine-containing phosphotransfer domain, HPT domain EspE N-terminal domain-like 11
Nqo1 FMN-binding domain-like Nqo1C-terminal domain-like 11
Smc hinge domain Tropomyosin 11
Leukotriene A4 hydrolase N-terminal domain Metalloproteases ("zincins"), catalytic domain 11
S-adenosyl-L-methionine-dependent methyltransferases PYP-like sensor domain (PAS domain) 11
DPP6 N-terminal domain-like Cytidine deaminase-like 11
Glycerol-3-phosphate (1)-acyltransferase Glycerol-3-phosphate (1)-acyltransferase 11
Chorismate mutase II Periplasmic binding protein-like II 11
Prokaryotic type I DNA topoisomerase SWIB/MDM2 domain 11
PheT/TilS domain Class II aaRS and biotin synthetases 11
Thioredoxin-like Thioredoxin-like 11
Cytidine deaminase-like Dihydrofolate reductase-like 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
S-adenosyl-L-methionine-dependent methyltransferases Homodimeric domain of signal transducing histidine kinase 11
Nucleotidylyl transferase Ribosomal protein L25-like 11
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 11
TPR-like Homeodomain-like 11
HMA, heavy metal-associated domain Metal cation-transporting ATPase, ATP-binding domain N 11
Class II aaRS and biotin synthetases Translation proteins 11
YajQ-like YajQ-like 11
Single hybrid motif FAD/NAD(P)-binding domain 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 11
TGS-like ThrRS/AlaRS common domain 11
Nucleotide cyclase P-loop containing nucleoside triphosphate hydrolases 11
Putative DNA-binding domain Translation proteins 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Nucleic acid-binding proteins 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FMN-linked oxidoreductases 11
PurS-like Class I glutamine amidotransferase-like 11
Terpenoid cyclases/Protein prenyltransferases Carboxypeptidase regulatory domain-like 11
Cu,Zn superoxide dismutase-like Calcium-dependent phosphotriesterase 11
TolB, N-terminal domain Tricorn protease N-terminal domain 11
DNA ligase/mRNA capping enzyme, catalytic domain RuvA domain 2-like 11
GIY-YIG endonuclease RuvA domain 2-like 11
PTS system IIB component-like PTS system IIB component-like 11
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 11
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
Nucleic acid-binding proteins PheT/TilS domain 11
Cadherin-like Cadherin-like 11
PUA domain-like alpha/beta knot 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
EspE N-terminal domain-like CheW-like 11
Homeodomain-like DNA-glycosylase 11
YbaK/ProRS associated domain Class II aaRS ABD-related 11
Translation proteins PRC-barrel domain 11
N-terminal domain of MutM-like DNA repair proteins Glucocorticoid receptor-like (DNA-binding domain) 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
Riboflavin synthase domain-like Riboflavin synthase domain-like 11
UraD-Like Zn-dependent exopeptidases 11
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Methylesterase CheB, C-terminal domain PYP-like sensor domain (PAS domain) 11
Nucleotidylyl transferase Nucleic acid-binding proteins 11
Nucleotidyltransferase Nucleotidyltransferase 11
Kelch motif Galactose oxidase, central domain 11
Restriction endonuclease-like Zinc beta-ribbon 11
Rho N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
Tex N-terminal region-like Nucleic acid-binding proteins 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Nucleic acid-binding proteins 11
RuvA domain 2-like MCP/YpsA-like 11
(Trans)glycosidases Carbohydrate-binding domain 11
PurS-like FGAM synthase PurL, linker domain 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
RuvA domain 2-like RuvA domain 2-like 11
Outer arm dynein light chain 1 Protein kinase-like (PK-like) 11
TPR-like NTF2-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 11
Nucleotide-diphospho-sugar transferases RmlC-like cupins 11
HPr-like Phosphohistidine domain 11
2Fe-2S ferredoxin-like FAD-binding/transporter-associated domain-like 11
CheY-like Nucleotide cyclase 11
Protein kinase-like (PK-like) P-loop containing nucleoside triphosphate hydrolases 11
PUA domain-like Ribosomal protein S5 domain 2-like 11
P-loop containing nucleoside triphosphate hydrolases Pentapeptide repeat-like 11
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 11
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 11
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 11
RmlC-like cupins Rhodanese/Cell cycle control phosphatase 11
TGS-like Class II aaRS and biotin synthetases 11
Terpenoid cyclases/Protein prenyltransferases Terpenoid cyclases/Protein prenyltransferases 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase HSP90 C-terminal domain 11
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 11
Aconitase B, N-terminal domain Aconitase iron-sulfur domain 11
FKBP-like FKBP-like 11
FAD-binding/transporter-associated domain-like alpha-helical ferredoxin 11
PurS-like PurM C-terminal domain-like 11
S-adenosyl-L-methionine-dependent methyltransferases CheY-like 11
Eukaryotic type KH-domain (KH-domain type I) Nucleic acid-binding proteins 11
Glutamyl tRNA-reductase catalytic, N-terminal domain NAD(P)-binding Rossmann-fold domains 11
FAD-binding/transporter-associated domain-like Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain 11
5' to 3' exonuclease, C-terminal subdomain Ribonuclease H-like 11
GroEL equatorial domain-like GroEL apical domain-like 11
Creatinase/prolidase N-terminal domain Creatinase/prolidase N-terminal domain 11
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 11
Glutathione synthetase ATP-binding domain-like Phosphoenolpyruvate/pyruvate domain 11
HAMP domain-like GAF domain-like 11
MFS general substrate transporter Glycerol-3-phosphate (1)-acyltransferase 11
Chemotaxis receptor methyltransferase CheR, N-terminal domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Glycosyl hydrolase domain Protein kinase-like (PK-like) 11
Molybdenum cofactor-binding domain Molybdenum cofactor-binding domain 11
Carboxypeptidase regulatory domain-like NHL repeat 11
alpha/beta-Hydrolases Cadherin-like 11
P-loop containing nucleoside triphosphate hydrolases CBS-domain pair 11
Nucleotidyltransferase substrate binding subunit/domain Nucleotidyltransferase substrate binding subunit/domain 11
HPr-like Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 11
TolA/TonB C-terminal domain TolA/TonB C-terminal domain 11
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 11
CheY-like TPR-like 11
Ribosomal protein S5 domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
Glutathione synthetase ATP-binding domain-like MurD-like peptide ligases, peptide-binding domain 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain ACT-like 11
Nucleotide cyclase SMAD/FHA domain 11
(Trans)glycosidases Chitinase insertion domain 11
Chemotaxis receptor methyltransferase CheR, N-terminal domain CheY-like 11
PPK N-terminal domain-like PHP14-like 11
HprK N-terminal domain-like PEP carboxykinase-like 11
GroEL-intermediate domain like GroEL apical domain-like 11
Cobalamin (vitamin B12)-binding domain Methionine synthase activation domain-like 11
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 11
YgfB-like Sec-C motif 11
DsbC/DsbG N-terminal domain-like Thioredoxin-like 11
Bacterial muramidases Lysozyme-like 11
Ribbon-helix-helix ACT-like 11
DinB/YfiT-like putative metalloenzymes C-type lectin-like 11
PK beta-barrel domain-like PK C-terminal domain-like 11
N-terminal domain of bifunctional PutA protein ALDH-like 11
Formyltransferase FMT C-terminal domain-like 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleotidylyl transferase 11
Cytochrome c oxidase subunit II-like, transmembrane region Cytochrome c 11
MFS general substrate transporter FAD-binding/transporter-associated domain-like 11
Ribonuclease H-like DNA/RNA polymerases 11
"Winged helix" DNA-binding domain LexA/Signal peptidase 11
Thioredoxin-like FAD/NAD(P)-binding domain 11
HAMP domain-like CheY-like 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) Homeodomain-like 11
Starch-binding domain-like Carboxypeptidase regulatory domain-like 11
Chorismate mutase II ACT-like 11
2Fe-2S ferredoxin-like 4Fe-4S ferredoxins 11
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 11
RuvA domain 2-like BRCT domain 11
Translation proteins Translation proteins 11
Nucleic acid-binding proteins Putative DNA-binding domain 11
Nucleotide cyclase TPR-like 11
Dihydropteroate synthetase-like Methionine synthase activation domain-like 11
Chondroitin AC/alginate lyase Fibronectin type III 11
TPR-like HCP-like 11
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11
Sensory domain-like CheY-like 11
Nqo1 FMN-binding domain-like Nqo1 middle domain-like 11
Homo-oligomeric flavin-containing Cys decarboxylases, HFCD CoaB-like 11
Class I glutamine amidotransferase-like LD-carboxypeptidase A C-terminal domain-like 11
Diaminopimelate epimerase-like Diaminopimelate epimerase-like 11
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 11
TROVE domain-like vWA-like 11
Barwin-like endoglucanases Carbohydrate-binding domain 11
alpha/beta-Hydrolases beta-Roll 11
P-loop containing nucleoside triphosphate hydrolases TPR-like 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
Thiolase-like FabD/lysophospholipase-like 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
Nucleotidylyl transferase YegP-like 11
PYP-like sensor domain (PAS domain) C-terminal effector domain of the bipartite response regulators 11
Fe-S cluster assembly (FSCA) domain-like P-loop containing nucleoside triphosphate hydrolases 11
Cysteine proteinases TPR-like 11
Nucleotidylyl transferase Nudix 11
GIY-YIG endonuclease C-terminal UvrC-binding domain of UvrB 11
NagB/RpiA/CoA transferase-like NagB/RpiA/CoA transferase-like 11
Protein kinase-like (PK-like) Adenine nucleotide alpha hydrolases-like 11
Dihydropteroate synthetase-like Methionine synthase domain 11
P-loop containing nucleoside triphosphate hydrolases TrpR-like 11
FAD/NAD(P)-binding domain Nitrite/Sulfite reductase N-terminal domain-like 11
ACP-like alpha/beta-Hydrolases 11
Probable ACP-binding domain of malonyl-CoA ACP transacylase ACP-like 11
EPT/RTPC-like P-loop containing nucleoside triphosphate hydrolases 11
(Trans)glycosidases Protein kinase-like (PK-like) 11
Flavoproteins Ferredoxin reductase-like, C-terminal NADP-linked domain 11
2Fe-2S ferredoxin-like alpha-helical ferredoxin 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
Heme-dependent peroxidases Heme-dependent peroxidases 11
Nucleic acid-binding proteins Rad51 N-terminal domain-like 11
Rhodanese/Cell cycle control phosphatase GST C-terminal domain-like 11
FGAM synthase PurL, linker domain PurM N-terminal domain-like 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
Glutamyl tRNA-reductase catalytic, N-terminal domain Glutamyl tRNA-reductase dimerization domain 11
Cupredoxins Starch-binding domain-like 11
CBS-domain pair PP2C-like 11
Methylesterase CheB, C-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 11
Sensory domain-like PYP-like sensor domain (PAS domain) 11
CheW-like CheY-like 11
FAD-linked reductases, C-terminal domain 4Fe-4S ferredoxins 11
CoA-dependent acyltransferases alpha/beta-Hydrolases 11
ACT-like Formyltransferase 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases PGBD-like 11
CoA-dependent acyltransferases NAD(P)-binding Rossmann-fold domains 11
Phoshotransferase/anion transport protein Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 11
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 11
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 11
Aconitase B, N-terminal domain LeuD/IlvD-like 11
S-adenosyl-L-methionine-dependent methyltransferases ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
PLP-dependent transferases Ornithine decarboxylase C-terminal domain 11
Heme-dependent catalase-like Class I glutamine amidotransferase-like 11
Nucleotide-diphospho-sugar transferases EspE N-terminal domain-like 11
Phoshotransferase/anion transport protein Phosphoenolpyruvate/pyruvate domain 11
GAF domain-like Calcium-dependent phosphotriesterase 11
Invasin/intimin cell-adhesion fragments Invasin/intimin cell-adhesion fragments 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
TATA-box binding protein-like DNA-glycosylase 11
Nucleotide-binding domain FAD/NAD(P)-binding domain 11
TPR-like S-adenosyl-L-methionine-dependent methyltransferases 11
E set domains Glycosyl hydrolase domain 11
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 11
Homeodomain-like Probable bacterial effector-binding domain 11
alpha-helical ferredoxin 4Fe-4S ferredoxins 11
Chemotaxis receptor methyltransferase CheR, N-terminal domain Homodimeric domain of signal transducing histidine kinase 11
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 11
Methylglyoxal synthase-like Cytidine deaminase-like 11
PurM N-terminal domain-like Class I glutamine amidotransferase-like 11
FMN-linked oxidoreductases 4Fe-4S ferredoxins 11
Transcription factor NusA, N-terminal domain Rad51 N-terminal domain-like 11
Rhodanese/Cell cycle control phosphatase Thioredoxin-like 11
GroES-like GroES-like 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
FMN-linked oxidoreductases Alpha subunit of glutamate synthase, C-terminal domain 11
CoA-transferase family III (CaiB/BaiF) CoA-transferase family III (CaiB/BaiF) 11
Fumarate reductase respiratory complex transmembrane subunits Nucleotide cyclase 11
L,D-transpeptidase catalytic domain-like NTF2-like 11
R1 subunit of ribonucleotide reductase, N-terminal domain PFL-like glycyl radical enzymes 11
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 11
Elongation factor Ts (EF-Ts), dimerisation domain Elongation factor Ts (EF-Ts), dimerisation domain 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 11
FGAM synthase PurL, linker domain PurM C-terminal domain-like 11
CheY-like HD-domain/PDEase-like 11
Nitrite/Sulfite reductase N-terminal domain-like Nitrite/Sulfite reductase N-terminal domain-like 11
FAD/NAD(P)-binding domain 4Fe-4S ferredoxins 11
Carbamate kinase-like Acyl-CoA N-acyltransferases (Nat) 11
Acyl-CoA N-acyltransferases (Nat) FKBP-like 11
Thiamin diphosphate-binding fold (THDP-binding) Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 11
"Winged helix" DNA-binding domain NagB/RpiA/CoA transferase-like 11
Ribonuclease PH domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
Tetrapyrrole methylase S-adenosyl-L-methionine-dependent methyltransferases 11
FAD-linked oxidases, C-terminal domain alpha-helical ferredoxin 11
Chondroitin AC/alginate lyase Galactose-binding domain-like 11
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 11
P-loop containing nucleoside triphosphate hydrolases TGS-like 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 11
Thioesterase/thiol ester dehydrase-isomerase Thioesterase/thiol ester dehydrase-isomerase 11
Thioesterase/thiol ester dehydrase-isomerase Acyl-CoA N-acyltransferases (Nat) 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
Nucleic acid-binding proteins DNA helicase RuvA subunit, C-terminal domain 11
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 11
PreATP-grasp domain PreATP-grasp domain 11
(Trans)glycosidases (Trans)glycosidases 11
Fibronectin type III Galactose-binding domain-like 11
CO dehydrogenase ISP C-domain like FAD-binding/transporter-associated domain-like 11
Nitrite and sulphite reductase 4Fe-4S domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
NAD(P)-binding Rossmann-fold domains Acyl-CoA N-acyltransferases (Nat) 11
Prokaryotic type KH domain (KH-domain type II) Rad51 N-terminal domain-like 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 11
CheY-like EAL domain-like 11
"Winged helix" DNA-binding domain Calcium-dependent phosphotriesterase 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
"Winged helix" DNA-binding domain MOP-like 11
DNA clamp DNA clamp 11
Class II aaRS and biotin synthetases YbaK/ProRS associated domain 11
Starch-binding domain-like Starch-binding domain-like 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Eukaryotic type KH-domain (KH-domain type I) 11
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 11
FGAM synthase PurL, linker domain Class I glutamine amidotransferase-like 11
Terpenoid cyclases/Protein prenyltransferases NHL repeat 11
PheT/TilS domain Putative DNA-binding domain 11
FabD/lysophospholipase-like NAD(P)-binding Rossmann-fold domains 11
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 11
PH0987 N-terminal domain-like Cyclophilin-like 11
Urease metallochaperone UreE, N-terminal domain Urease metallochaperone UreE, C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases Smc hinge domain 11
Protein kinase-like (PK-like) TPR-like 11
Phoshotransferase/anion transport protein Phosphohistidine domain 11
Trigger factor ribosome-binding domain FKBP-like 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
N-terminal domain of bifunctional PutA protein FAD-linked oxidoreductase 11
Pheromone-binding domain of LuxR-like quorum-sensing transcription factors C-terminal effector domain of the bipartite response regulators 11
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
Cobalamin (vitamin B12)-dependent enzymes Cobalamin (vitamin B12)-binding domain 11
ADC synthase D-aminoacid aminotransferase-like PLP-dependent enzymes 11
Ankyrin repeat Sigma2 domain of RNA polymerase sigma factors 11
Dihydropteroate synthetase-like Cobalamin (vitamin B12)-binding domain 11
Putative DNA-binding domain P-loop containing nucleoside triphosphate hydrolases 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
(Trans)glycosidases Glycoside hydrolase/deacetylase 11
Kelch motif Kelch motif 11
Galactose oxidase, central domain Fibronectin type III 11
Nucleotidyltransferase substrate binding subunit/domain ACT-like 11
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 11
Nucleic acid-binding proteins ArfGap/RecO-like zinc finger 11
Kelch motif Fibronectin type III 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
EspE N-terminal domain-like Homodimeric domain of signal transducing histidine kinase 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
EPT/RTPC-like RNA 3'-terminal phosphate cyclase, RPTC, insert domain 11
Fumarate reductase respiratory complex transmembrane subunits 2Fe-2S ferredoxin-like 11
Methionine synthase domain Cobalamin (vitamin B12)-binding domain 11
2Fe-2S ferredoxin-like Nucleotide cyclase 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleic acid-binding proteins 11
PHL pollen allergen Carbohydrate-binding domain 11
Folate-binding domain Aminomethyltransferase beta-barrel domain 11
FAD/NAD(P)-binding domain alpha/beta-Hydrolases 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 11
Methionine synthase domain Methionine synthase activation domain-like 11
Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases 11
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 11
DNA-glycosylase Nudix 11
P-loop containing nucleoside triphosphate hydrolases CarD-like 11
Carbon-nitrogen hydrolase Carbon-nitrogen hydrolase 11
a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 11
SMAD/FHA domain SMAD/FHA domain 11
Fumarylacetoacetate hydrolase, FAH, N-terminal domain FAH 11
UraD-Like Bacterial exopeptidase dimerisation domain 11
Ribonuclease H-like Nucleic acid-binding proteins 11
Ankyrin repeat Sigma3 and sigma4 domains of RNA polymerase sigma factors 11
Rho N-terminal domain-like Nucleic acid-binding proteins 11
Methylesterase CheB, C-terminal domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Hedgehog/intein (Hint) domain Homing endonucleases 11
RuvA domain 2-like DNA helicase RuvA subunit, C-terminal domain 11
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 11
YhbC-like, N-terminal domain YhbC-like, C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases HRDC-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Alpha subunit of glutamate synthase, C-terminal domain 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) TATA-box binding protein-like 11
Homing endonucleases PFL-like glycyl radical enzymes 11
Thiolase-like NAD(P)-binding Rossmann-fold domains 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
Thiolase-like ACP-like 11
Actin-like ATPase domain HD-domain/PDEase-like 11
FAD-linked oxidoreductase ALDH-like 11
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 11
DNA topoisomerase I domain DNA breaking-rejoining enzymes 11
Nucleotide cyclase Nucleotide cyclase 11
Thiolase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 11
Putative DNA-binding domain CheY-like 11
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 11
Transcription factor NusA, N-terminal domain Prokaryotic type KH domain (KH-domain type II) 11
Phoshotransferase/anion transport protein HPr-like 11
Pectin lyase-like Pectin lyase-like 11
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 11
Acetyl-CoA synthetase-like NAD(P)-binding Rossmann-fold domains 11
"Winged helix" DNA-binding domain Acyl-CoA N-acyltransferases (Nat) 11
N-terminal domain of DnaB helicase P-loop containing nucleoside triphosphate hydrolases 11
Terpenoid cyclases/Protein prenyltransferases Starch-binding domain-like 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
Nucleic acid-binding proteins GAD domain-like 11
Acid phosphatase/Vanadium-dependent haloperoxidase Pectin lyase-like 11
Nudix Metallo-hydrolase/oxidoreductase 11
Transcription factor NusA, N-terminal domain Nucleic acid-binding proteins 11
Nucleic acid-binding proteins BRCT domain 11
Single hybrid motif Single hybrid motif 11
Adenine nucleotide alpha hydrolases-like Homodimeric domain of signal transducing histidine kinase 11
Chaperone J-domain HSP40/DnaJ peptide-binding domain 11
Glucocorticoid receptor-like (DNA-binding domain) P-loop containing nucleoside triphosphate hydrolases 11
FliG FliG 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase PP2C-like 11
Adenine nucleotide alpha hydrolases-like GAF domain-like 11
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 11
Nudix "Winged helix" DNA-binding domain 11
Nucleotide cyclase PilZ domain-like 11
FabD/lysophospholipase-like ACP-like 11
Hedgehog/intein (Hint) domain PFL-like glycyl radical enzymes 11
PHP14-like Phospholipase D/nuclease 11
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 11
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 11
4Fe-4S ferredoxins Formate dehydrogenase/DMSO reductase, domains 1-3 11
Chaperone J-domain HSC20 (HSCB), C-terminal oligomerisation domain 11
NagB/RpiA/CoA transferase-like D-ribose-5-phosphate isomerase (RpiA), lid domain 11
beta-Roll Cadherin-like 11
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 11
Ribonuclease H-like RuvA domain 2-like 11
PPK N-terminal domain-like Phospholipase D/nuclease 11
Hsp33 domain HSP33 redox switch-like 11
Lysozyme-like PGBD-like 11
Nucleic acid-binding proteins S-adenosyl-L-methionine-dependent methyltransferases 11
Barwin-like endoglucanases PHL pollen allergen 11
Rad51 N-terminal domain-like Rad51 N-terminal domain-like 11
Ferritin-like Ferritin-like 11
Nqo1 middle domain-like Nqo1C-terminal domain-like 11
Aldolase post-HMGL domain-like 11
PIN domain-like P-loop containing nucleoside triphosphate hydrolases 11
C-terminal UvrC-binding domain of UvrB RuvA domain 2-like 11
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
Ligand-binding domain in the NO signalling and Golgi transport P-loop containing nucleoside triphosphate hydrolases 11
NTF2-like FAD/NAD(P)-binding domain 11
post-HMGL domain-like 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 11
Succinyl-CoA synthetase domains Acyl-CoA N-acyltransferases (Nat) 11
P-loop containing nucleoside triphosphate hydrolases C-terminal UvrC-binding domain of UvrB 11
Chemotaxis receptor methyltransferase CheR, N-terminal domain PYP-like sensor domain (PAS domain) 11
Galactose mutarotase-like E set domains 11
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 11
Radical SAM enzymes RuvA domain 2-like 11
PurS-like PurM N-terminal domain-like 11
CO dehydrogenase ISP C-domain like CO dehydrogenase flavoprotein C-terminal domain-like 11
GroEL equatorial domain-like GroEL-intermediate domain like 11
"Winged helix" DNA-binding domain Cytidine deaminase-like 11
Adenine nucleotide alpha hydrolases-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
PheT/TilS domain Anticodon-binding domain of PheRS 11
CheC-like Surface presentation of antigens (SPOA) 11
Probable ACP-binding domain of malonyl-CoA ACP transacylase NAD(P)-binding Rossmann-fold domains 11
Putative DNA-binding domain Initiation factor IF2/eIF5b, domain 3 11
Nucleotidylyl transferase tRNA-binding arm 11
YrdC/RibB RibA-like 11
Methylesterase CheB, C-terminal domain Chemotaxis receptor methyltransferase CheR, N-terminal domain 11
Glutathione synthetase ATP-binding domain-like L-aspartase-like 11
2Fe-2S ferredoxin-like CO dehydrogenase flavoprotein C-terminal domain-like 11
PurM C-terminal domain-like Class I glutamine amidotransferase-like 11
TrmE connector domain P-loop containing nucleoside triphosphate hydrolases 11
Cyclophilin-like Cyclophilin-like 11
Histidine-containing phosphotransfer domain, HPT domain Histidine-containing phosphotransfer domain, HPT domain 11
Acetyl-CoA synthetase-like alpha/beta-Hydrolases 11
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 11
Homeodomain-like TATA-box binding protein-like 11
PIN domain-like DNA/RNA polymerases 11
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 11
PRTase-like PRTase-like 11
Ligand-binding domain in the NO signalling and Golgi transport Homeodomain-like 11
DnaK suppressor protein DksA, alpha-hairpin domain Glucocorticoid receptor-like (DNA-binding domain) 11
beta-lactamase/transpeptidase-like Penicillin-binding protein associated domain 11
TGS-like Class II aaRS ABD-related 11
NAD(P)-binding Rossmann-fold domains Glutamyl tRNA-reductase dimerization domain 11
FMN-linked oxidoreductases Nucleotide-binding domain 11
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 11
DPP6 N-terminal domain-like alpha/beta-Hydrolases 11
Glutamine synthetase/guanido kinase GatB/YqeY motif 11
PUA domain-like S-adenosyl-L-methionine-dependent methyltransferases 11
Formate/glycerate dehydrogenase catalytic domain-like ACT-like 11
2Fe-2S ferredoxin-like Formate dehydrogenase/DMSO reductase, domains 1-3 11
Ribosomal protein L6 Ribosomal protein L6 11

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