SUPERFAMILY 1.75 HMM library and genome assignments server

Domain combination pairs in Desulfovibrio alaskensis G20

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

  • For a list of unique full length architectures for this genome click here (can be slow).
Adjacent domain pairs graph

Graph of adjacent domain pairs.


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Domain combination pairs

703 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 4229
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 3221
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 3120
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 2810
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 2512
Homeodomain-like Ribonuclease H-like 213
CheY-like P-loop containing nucleoside triphosphate hydrolases 185
PYP-like sensor domain (PAS domain) PYP-like sensor domain (PAS domain) 1815
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheY-like 1717
Homodimeric domain of signal transducing histidine kinase CheY-like 1616
CheY-like Homeodomain-like 163
PYP-like sensor domain (PAS domain) CheY-like 1515
PYP-like sensor domain (PAS domain) Nucleotide cyclase 1414
Actin-like ATPase domain Actin-like ATPase domain 103
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 92
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 84
Nucleotide cyclase EAL domain-like 88
Formate dehydrogenase/DMSO reductase, domains 1-3 ADC-like 81
PYP-like sensor domain (PAS domain) P-loop containing nucleoside triphosphate hydrolases 84
PYP-like sensor domain (PAS domain) Homeodomain-like 84
P-loop containing nucleoside triphosphate hydrolases Translation proteins 86
PYP-like sensor domain (PAS domain) Methyl-accepting chemotaxis protein (MCP) signaling domain 83
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 74
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 74
Composite domain of metallo-dependent hydrolases Metallo-dependent hydrolases 73
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 72
Homeodomain-like Tetracyclin repressor-like, C-terminal domain 71
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 62
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 62
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB transmembrane domain 62
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 63
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 66
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 62
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB transmembrane domain 62
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein S5 domain 2-like 63
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 64
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 62
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 62
PYP-like sensor domain (PAS domain) EAL domain-like 66
"Winged helix" DNA-binding domain Periplasmic binding protein-like II 61
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 64
Translation proteins EF-G C-terminal domain-like 53
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 51
Homodimeric domain of signal transducing histidine kinase Histidine-containing phosphotransfer domain, HPT domain 55
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 54
ACT-like ACT-like 52
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 52
HAMP domain-like PYP-like sensor domain (PAS domain) 55
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 54
CheY-like CheY-like 54
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Histidine-containing phosphotransfer domain, HPT domain 55
Calcium ATPase, transduction domain A HAD-like 54
TPR-like TPR-like 55
HAMP domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 55
EF-G C-terminal domain-like EF-G C-terminal domain-like 53
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Adenine nucleotide alpha hydrolases-like 51
PurM N-terminal domain-like PurM C-terminal domain-like 52
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 41
cAMP-binding domain-like "Winged helix" DNA-binding domain 41
DNA methylase specificity domain DNA methylase specificity domain 43
GAF domain-like PYP-like sensor domain (PAS domain) 44
Sensory domain-like Methyl-accepting chemotaxis protein (MCP) signaling domain 43
Nucleic acid-binding proteins Nucleic acid-binding proteins 44
NAD(P)-binding Rossmann-fold domains TrkA C-terminal domain-like 44
"Winged helix" DNA-binding domain GntR ligand-binding domain-like 41
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 43
4Fe-4S ferredoxins Fe-only hydrogenase 42
CheY-like HD-domain/PDEase-like 43
HAMP domain-like Homodimeric domain of signal transducing histidine kinase 44
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 43
Ribosomal protein S5 domain 2-like EF-G C-terminal domain-like 42
CheW-like CheY-like 42
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 41
PLP-binding barrel Alanine racemase C-terminal domain-like 41
4Fe-4S ferredoxins Radical SAM enzymes 31
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 31
CcmK-like CcmK-like 31
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 33
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 32
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 33
Sm-like ribonucleoproteins Mechanosensitive channel protein MscS (YggB), C-terminal domain 32
Class II aaRS and biotin synthetases Class II aaRS ABD-related 33
Succinyl-CoA synthetase domains NAD(P)-binding Rossmann-fold domains 33
Adenine nucleotide alpha hydrolases-like Adenine nucleotide alpha hydrolases-like 31
FAD/NAD(P)-binding domain 4Fe-4S ferredoxins 32
HAMP domain-like Methyl-accepting chemotaxis protein (MCP) signaling domain 32
lambda repressor-like DNA-binding domains LexA/Signal peptidase 31
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 32
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 32
Chemotaxis receptor methyltransferase CheR, N-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 32
NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains 33
PreATP-grasp domain Rudiment single hybrid motif 32
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 33
CheY-like Nucleotide cyclase 33
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 33
P-loop containing nucleoside triphosphate hydrolases HprK N-terminal domain-like 32
Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), C-terminal domain 32
Sensory domain-like PYP-like sensor domain (PAS domain) 32
4Fe-4S ferredoxins FMN-dependent nitroreductase-like 31
alpha-helical ferredoxin Nucleotide-binding domain 33
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 33
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 32
Homeodomain-like Homeodomain-like 32
Chaperone J-domain HSP40/DnaJ peptide-binding domain 33
Ferritin-like Rubredoxin-like 31
CheY-like Histidine-containing phosphotransfer domain, HPT domain 33
Zinc beta-ribbon DNA primase core 32
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 32
P-loop containing nucleoside triphosphate hydrolases MOP-like 31
Translation proteins Ribosomal protein S5 domain 2-like 31
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 32
Trypsin-like serine proteases PDZ domain-like 33
Succinyl-CoA synthetase domains Succinyl-CoA synthetase domains 33
Triger factor/SurA peptide-binding domain-like FKBP-like 33
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 32
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 32
Alpha-L RNA-binding motif Pseudouridine synthase 32
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 32
Pyruvate-ferredoxin oxidoreductase, PFOR, domain III Thiamin diphosphate-binding fold (THDP-binding) 33
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 32
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 33
HAD-like Calcium ATPase, transmembrane domain M 33
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 33
Nucleic acid-binding proteins RuvA domain 2-like 33
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 33
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 32
PYP-like sensor domain (PAS domain) HD-domain/PDEase-like 33
CheY-like C-terminal effector domain of the bipartite response regulators 31
HD-domain/PDEase-like HD-domain/PDEase-like 31
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 31
Thiolase-like FabD/lysophospholipase-like 22
HD-domain/PDEase-like ACT-like 22
Thiolase-like ACP-like 22
Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases 22
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 22
Homodimeric domain of signal transducing histidine kinase CheW-like 22
Nucleotide-diphospho-sugar transferases UDP-Glycosyltransferase/glycogen phosphorylase 22
Acyl-CoA N-acyltransferases (Nat) Acyl-CoA N-acyltransferases (Nat) 22
MOP-like MOP-like 22
MoeA N-terminal region -like Molybdenum cofactor biosynthesis proteins 22
CoA-dependent acyltransferases Acetyl-CoA synthetase-like 22
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
Nucleotidyltransferase Poly A polymerase C-terminal region-like 22
FabD/lysophospholipase-like Acetyl-CoA synthetase-like 22
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 22
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphohistidine domain 22
Barwin-like endoglucanases Sporulation related repeat 22
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 21
Cytochrome c Multiheme cytochromes 22
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 22
Nucleotidyltransferase ACT-like 22
4Fe-4S ferredoxins Nitrite and sulphite reductase 4Fe-4S domain-like 21
P-loop containing nucleoside triphosphate hydrolases TrpR-like 21
Histidine-containing phosphotransfer domain, HPT domain CheW-like 22
Probable ACP-binding domain of malonyl-CoA ACP transacylase ACP-like 22
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 22
FAD/NAD(P)-binding domain Rhodanese/Cell cycle control phosphatase 22
PDZ domain-like PDZ domain-like 22
Probable ACP-binding domain of malonyl-CoA ACP transacylase CoA-dependent acyltransferases 22
MetI-like MetI-like 22
Nitrite/Sulfite reductase N-terminal domain-like 4Fe-4S ferredoxins 21
CoA-dependent acyltransferases CoA-dependent acyltransferases 22
Probable ACP-binding domain of malonyl-CoA ACP transacylase Acetyl-CoA synthetase-like 22
HD-domain/PDEase-like Nucleotidyltransferase 22
FAD/NAD-linked reductases, dimerisation (C-terminal) domain Rhodanese/Cell cycle control phosphatase 22
CBS-domain pair Nucleotide cyclase 22
TrkA C-terminal domain-like TrkA C-terminal domain-like 22
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
Rhodanese/Cell cycle control phosphatase Ferritin-like 21
HlyD-like secretion proteins HlyD-like secretion proteins 22
ACP-like Acetyl-CoA synthetase-like 22
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 21
Glutathione synthetase ATP-binding domain-like NAD(P)-binding Rossmann-fold domains 22
"Winged helix" DNA-binding domain LexA/Signal peptidase 21
Thiamin diphosphate-binding fold (THDP-binding) 4Fe-4S ferredoxins 22
Penicillin binding protein dimerisation domain beta-lactamase/transpeptidase-like 22
MoeA N-terminal region -like MoeA C-terminal domain-like 22
GAF domain-like P-loop containing nucleoside triphosphate hydrolases 22
Fic-like "Winged helix" DNA-binding domain 21
6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 21
Sensory domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 22
FabD/lysophospholipase-like ACP-like 22
NAD(P)-binding Rossmann-fold domains UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 21
Thiolase-like Acetyl-CoA synthetase-like 22
DnaK suppressor protein DksA, alpha-hairpin domain Glucocorticoid receptor-like (DNA-binding domain) 21
ThrRS/AlaRS common domain Class II aaRS and biotin synthetases 22
lambda repressor-like DNA-binding domains RmlC-like cupins 21
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 21
CheY-like TPR-like 22
Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 4Fe-4S ferredoxins 22
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 22
Molybdenum cofactor biosynthesis proteins MoeA C-terminal domain-like 22
EAL domain-like HD-domain/PDEase-like 21
CheY-like Methylesterase CheB, C-terminal domain 21
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 22
P-loop containing nucleoside triphosphate hydrolases Nitrogenase accessory factor-like 21
"Winged helix" DNA-binding domain PLP-dependent transferases 21
(Trans)glycosidases Glycosyl hydrolase domain 22
Periplasmic binding protein-like II Lysozyme-like 21
PUA domain-like Ribosomal protein S5 domain 2-like 21
Aldolase AFP III-like domain 21
FAD-linked oxidases, C-terminal domain alpha-helical ferredoxin 22
Pyruvate-ferredoxin oxidoreductase, PFOR, domain III TK C-terminal domain-like 22
TPR-like HCP-like 22
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 22
HAMP domain-like CheY-like 22
Glutathione synthetase ATP-binding domain-like Succinyl-CoA synthetase domains 22
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 22
E set domains (Trans)glycosidases 22
Methyl-accepting chemotaxis protein (MCP) signaling domain Hemerythrin-like 21
GAF domain-like Homeodomain-like 22
"Winged helix" DNA-binding domain NagB/RpiA/CoA transferase-like 21
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 21
4Fe-4S ferredoxins P-loop containing nucleoside triphosphate hydrolases 21
Thiolase-like CoA-dependent acyltransferases 22
GAF domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 22
FAD-binding/transporter-associated domain-like alpha-helical ferredoxin 22
Enolase N-terminal domain-like Enolase C-terminal domain-like 21
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphoenolpyruvate/pyruvate domain 22
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 22
Lysozyme-like beta-lactamase/transpeptidase-like 22
FabD/lysophospholipase-like CoA-dependent acyltransferases 22
CBS-domain pair FAD-binding/transporter-associated domain-like 21
Resolvase-like Homeodomain-like 21
Clc chloride channel CBS-domain pair 21
Periplasmic binding protein-like II PYP-like sensor domain (PAS domain) 22
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 21
tRNA-binding arm Class II aaRS and biotin synthetases 21
ACP-like CoA-dependent acyltransferases 22
Thiolase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 22
"Winged helix" DNA-binding domain GAF domain-like 22
Aldehyde ferredoxin oxidoreductase, N-terminal domain Aldehyde ferredoxin oxidoreductase, C-terminal domains 21
Thiolase-like Thiolase-like 21
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 22
Nucleic acid-binding proteins Translation proteins SH3-like domain 22
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheW-like 22
GAF domain-like Nucleotide cyclase 22
"Winged helix" DNA-binding domain C-terminal domain of transcriptional repressors 11
Periplasmic binding protein-like II Homodimeric domain of signal transducing histidine kinase 11
Translation proteins "Winged helix" DNA-binding domain 11
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 11
Zinc beta-ribbon Zinc beta-ribbon 11
Methyl-accepting chemotaxis protein (MCP) signaling domain Ligand-binding domain in the NO signalling and Golgi transport 11
Ribosomal protein L6 Ribosomal protein L6 11
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 11
Nucleotidylyl transferase Ribosomal protein L25-like 11
Nucleic acid-binding proteins GAD domain-like 11
Nucleotidyltransferase substrate binding subunit/domain ACT-like 11
ClpP/crotonase NfeD domain-like 11
YaeB-like AraD/HMP-PK domain-like 11
CBS-domain pair Nucleotidyltransferase 11
S-adenosyl-L-methionine-dependent methyltransferases CoA-dependent acyltransferases 11
Ribonuclease PH domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 11
cAMP-binding domain-like CBS-domain pair 11
PA domain Zn-dependent exopeptidases 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
EAL domain-like CBS-domain pair 11
L9 N-domain-like Ribosomal protein L9 C-domain 11
Radical SAM enzymes TPR-like 11
Prokaryotic type KH domain (KH-domain type II) Prokaryotic type KH domain (KH-domain type II) 11
Macro domain-like Zn-dependent exopeptidases 11
Galactose-binding domain-like Galactose-binding domain-like 11
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 11
C-terminal UvrC-binding domain of UvrB RuvA domain 2-like 11
Periplasmic binding protein-like II ACT-like 11
Ribosomal protein S5 domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
NAD(P)-binding Rossmann-fold domains MurD-like peptide ligases, catalytic domain 11
Glutathione synthetase ATP-binding domain-like Phosphoenolpyruvate/pyruvate domain 11
ClpP/crotonase ClpP/crotonase 11
RNase III domain-like dsRNA-binding domain-like 11
Nucleic acid-binding proteins Anticodon-binding domain of PheRS 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 11
S-adenosyl-L-methionine-dependent methyltransferases alpha/beta-Hydrolases 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 11
TolB, N-terminal domain Integrin alpha N-terminal domain 11
HAMP domain-like PP2C-like 11
Acyl-CoA N-acyltransferases (Nat) Activating enzymes of the ubiquitin-like proteins 11
Alpha-L RNA-binding motif P-loop containing nucleoside triphosphate hydrolases 11
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 11
Periplasmic binding protein-like II ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 11
Ribonuclease H-like mu transposase, C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 11
CheY-like PP2C-like 11
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
Methionine synthase domain Cobalamin (vitamin B12)-binding domain 11
FabD/lysophospholipase-like S-adenosyl-L-methionine-dependent methyltransferases 11
UDP-Glycosyltransferase/glycogen phosphorylase UDP-Glycosyltransferase/glycogen phosphorylase 11
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
PUA domain-like Nucleotidylyl transferase 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Eukaryotic type KH-domain (KH-domain type I) 11
RuvA domain 2-like P-loop containing nucleoside triphosphate hydrolases 11
Periplasmic binding protein-like II GlnB-like 11
GroEL equatorial domain-like GroEL-intermediate domain like 11
P-loop containing nucleoside triphosphate hydrolases CarD-like 11
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 11
UDP-Glycosyltransferase/glycogen phosphorylase S-adenosyl-L-methionine-dependent methyltransferases 11
LysM domain LysM domain 11
GroEL-intermediate domain like GroEL apical domain-like 11
"Winged helix" DNA-binding domain NAD(P)-binding Rossmann-fold domains 11
Voltage-gated potassium channels NAD(P)-binding Rossmann-fold domains 11
CO dehydrogenase molybdoprotein N-domain-like Molybdenum cofactor-binding domain 11
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 11
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain "Winged helix" DNA-binding domain 11
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 11
SufE/NifU Fe-S cluster assembly (FSCA) domain-like 11
EreA/ChaN-like PDZ domain-like 11
alpha/beta knot alpha/beta knot 11
Aldolase post-HMGL domain-like 11
PilZ domain-like PilZ domain-like 11
PDZ domain-like ClpP/crotonase 11
ACT-like PYP-like sensor domain (PAS domain) 11
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
Rho N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
PreATP-grasp domain post-HMGL domain-like 11
DNA repair protein MutS, domain III SMR domain-like 11
"Winged helix" DNA-binding domain Acyl-CoA N-acyltransferases (Nat) 11
FMN-dependent nitroreductase-like FMN-dependent nitroreductase-like 11
alpha-helical ferredoxin 4Fe-4S ferredoxins 11
Bacterial fluorinating enzyme, N-terminal domain Bacterial fluorinating enzyme, C-terminal domain 11
GreA transcript cleavage protein, N-terminal domain FKBP-like 11
Dihydropteroate synthetase-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
FKBP-like S-adenosyl-L-methionine-dependent methyltransferases 11
L30e-like alpha/beta knot 11
CbiG N-terminal domain-like Tetrapyrrole methylase 11
Homocysteine S-methyltransferase Methionine synthase domain 11
P-loop containing nucleoside triphosphate hydrolases Ribonuclease H-like 11
2Fe-2S ferredoxin-like CO dehydrogenase ISP C-domain like 11
P-loop containing nucleoside triphosphate hydrolases TGS-like 11
NTF2-like Sec-C motif 11
2Fe-2S ferredoxin-like alpha-helical ferredoxin 11
PTS system fructose IIA component-like Phosphoenolpyruvate/pyruvate domain 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
Metal cation-transporting ATPase, ATP-binding domain N HAD-like 11
NAD(P)-binding Rossmann-fold domains ACT-like 11
Rhodanese/Cell cycle control phosphatase Rhodanese/Cell cycle control phosphatase 11
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 11
L,D-transpeptidase catalytic domain-like NTF2-like 11
Aspartate/glutamate racemase Aspartate/glutamate racemase 11
CO dehydrogenase ISP C-domain like Molybdenum cofactor-binding domain 11
N-terminal domain of DnaB helicase P-loop containing nucleoside triphosphate hydrolases 11
RuvA domain 2-like RuvA domain 2-like 11
post-HMGL domain-like Single hybrid motif 11
HMA, heavy metal-associated domain HMA, heavy metal-associated domain 11
S-adenosyl-L-methionine-dependent methyltransferases ACP-like 11
PheT/TilS domain Class II aaRS and biotin synthetases 11
DhaL-like DAK1/DegV-like 11
Rudiment single hybrid motif Aldolase 11
GAF domain-like CheY-like 11
P-loop containing nucleoside triphosphate hydrolases Hypothetical protein YjiA, C-terminal domain 11
FAD-binding/transporter-associated domain-like Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain 11
Rubredoxin-like Superoxide reductase-like 11
DNA ligase/mRNA capping enzyme, catalytic domain RuvA domain 2-like 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
P-loop containing nucleoside triphosphate hydrolases SMR domain-like 11
Glutathione synthetase ATP-binding domain-like Aldolase 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
Nqo1 middle domain-like alpha-helical ferredoxin 11
ACT-like P-loop containing nucleoside triphosphate hydrolases 11
Nqo1 FMN-binding domain-like alpha-helical ferredoxin 11
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
Nucleic acid-binding proteins Putative DNA-binding domain 11
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 11
TTHA1013/TTHA0281-like Ribbon-helix-helix 11
HPr-like Phosphohistidine domain 11
GroEL equatorial domain-like GroEL apical domain-like 11
Glutathione synthetase ATP-binding domain-like post-HMGL domain-like 11
Transcription factor NusA, N-terminal domain Rad51 N-terminal domain-like 11
ACP-like alpha/beta-Hydrolases 11
PurS-like PurM N-terminal domain-like 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
Acyl-CoA N-acyltransferases (Nat) FMN-dependent nitroreductase-like 11
2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain Alkaline phosphatase-like 11
Calcium ATPase, transduction domain A Metal cation-transporting ATPase, ATP-binding domain N 11
Homo-oligomeric flavin-containing Cys decarboxylases, HFCD CoaB-like 11
HIT-like HIT-like 11
Glutathione synthetase ATP-binding domain-like Acyl-CoA N-acyltransferases (Nat) 11
Class II aaRS and biotin synthetases GAD domain-like 11
Eukaryotic type KH-domain (KH-domain type I) Nucleic acid-binding proteins 11
E set domains Glycosyl hydrolase domain 11
GIY-YIG endonuclease C-terminal UvrC-binding domain of UvrB 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
"Winged helix" DNA-binding domain Chorismate lyase-like 11
Nucleotide-diphospho-sugar transferases NAD(P)-binding Rossmann-fold domains 11
Putative DNA-binding domain Ribonuclease H-like 11
Regulator of G-protein signaling, RGS CheW-like 11
all-alpha NTP pyrophosphatases all-alpha NTP pyrophosphatases 11
Nucleic acid-binding proteins Rad51 N-terminal domain-like 11
NAD(P)-binding Rossmann-fold domains Acyl-CoA N-acyltransferases (Nat) 11
Periplasmic binding protein-like II Cytidine deaminase-like 11
Folate-binding domain Aminomethyltransferase beta-barrel domain 11
NAD(P)-binding Rossmann-fold domains ACP-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase HSP90 C-terminal domain 11
Thioredoxin-like Six-hairpin glycosidases 11
Glucocorticoid receptor-like (DNA-binding domain) P-loop containing nucleoside triphosphate hydrolases 11
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 11
Aconitase iron-sulfur domain LeuD/IlvD-like 11
UDP-Glycosyltransferase/glycogen phosphorylase PLP-dependent transferases 11
Acylphosphatase/BLUF domain-like YrdC/RibB 11
DNA clamp DNA clamp 11
P-loop containing nucleoside triphosphate hydrolases Acyl-CoA N-acyltransferases (Nat) 11
Cupredoxins Cytochrome c 11
Transcription factor NusA, N-terminal domain Prokaryotic type KH domain (KH-domain type II) 11
Nucleotide cyclase TPR-like 11
S-adenosyl-L-methionine-dependent methyltransferases Acetyl-CoA synthetase-like 11
GAF domain-like GAF domain-like 11
DHH phosphoesterases Poly A polymerase C-terminal region-like 11
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 11
Putative DNA-binding domain Anticodon-binding domain of PheRS 11
beta-lactamase/transpeptidase-like Penicillin-binding protein 2x (pbp-2x), c-terminal domain 11
NagB/RpiA/CoA transferase-like 4Fe-4S ferredoxins 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 11
beta-Roll beta-Roll 11
Translation proteins Initiation factor IF2/eIF5b, domain 3 11
Regulator of G-protein signaling, RGS ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Translation proteins Translation proteins 11
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 11
PheT/TilS domain Putative DNA-binding domain 11
R1 subunit of ribonucleotide reductase, N-terminal domain PFL-like glycyl radical enzymes 11
lambda repressor-like DNA-binding domains Periplasmic binding protein-like I 11
PheT/TilS domain Anticodon-binding domain of PheRS 11
Sensory domain-like Homodimeric domain of signal transducing histidine kinase 11
CarD-like TRCF domain-like 11
YjeF N-terminal domain-like Ribokinase-like 11
Glycosyl hydrolase domain Protein kinase-like (PK-like) 11
Voltage-gated potassium channels TrkA C-terminal domain-like 11
P-loop containing nucleoside triphosphate hydrolases C-terminal UvrC-binding domain of UvrB 11
HMA, heavy metal-associated domain HAD-like 11
Epsilon subunit of F1F0-ATP synthase N-terminal domain Epsilon subunit of F1F0-ATP synthase C-terminal domain 11
Molybdenum cofactor biosynthesis proteins Periplasmic binding protein-like II 11
Chorismate mutase II Periplasmic binding protein-like II 11
CheY-like EAL domain-like 11
GAF domain-like Histidine-containing phosphotransfer domain, HPT domain 11
PHP domain-like UDP-Glycosyltransferase/glycogen phosphorylase 11
PurS-like PurM C-terminal domain-like 11
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 11
S13-like H2TH domain Glucocorticoid receptor-like (DNA-binding domain) 11
HD-domain/PDEase-like Nucleotide cyclase 11
ACT-like Homeodomain-like 11
Adenine nucleotide alpha hydrolases-like MesJ substrate recognition domain-like 11
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 11
vWA-like OmpA-like 11
YhbC-like, N-terminal domain YhbC-like, C-terminal domain 11
alpha-helical ferredoxin alpha-helical ferredoxin 11
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 11
Pseudouridine synthase P-loop containing nucleoside triphosphate hydrolases 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
CBS-domain pair MgtE membrane domain-like 11
4Fe-4S ferredoxins FMN-linked oxidoreductases 11
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 11
DNA-glycosylase Nudix 11
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 11
S-adenosyl-L-methionine-dependent methyltransferases S-adenosyl-L-methionine-dependent methyltransferases 11
HPr-like Phosphoenolpyruvate/pyruvate domain 11
NAD(P)-binding Rossmann-fold domains Bet v1-like 11
Nucleotide-binding domain Nucleotide-binding domain 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
Translation proteins PRC-barrel domain 11
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 11
HD-domain/PDEase-like TGS-like 11
MgtE N-terminal domain-like MgtE membrane domain-like 11
Nucleotidylyl transferase Riboflavin kinase-like 11
5' to 3' exonuclease, C-terminal subdomain DNA/RNA polymerases 11
FAD/NAD(P)-binding domain HI0933 insert domain-like 11
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 11
Cytidine deaminase-like Dihydrofolate reductase-like 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 11
NagB/RpiA/CoA transferase-like alpha-helical ferredoxin 11
Nucleotidylyl transferase tRNA-binding arm 11
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 11
ACP-like ACP-like 11
DHH phosphoesterases CBS-domain pair 11
CBS-domain pair Poly A polymerase C-terminal region-like 11
NAD(P)-binding Rossmann-fold domains alpha/beta-Hydrolases 11
PreATP-grasp domain Methylglyoxal synthase-like 11
NAD(P)-binding Rossmann-fold domains CoA-dependent acyltransferases 11
Dihydropteroate synthetase-like Methionine synthase domain 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Nucleic acid-binding proteins 11
PIN domain-like DNA/RNA polymerases 11
FabD/lysophospholipase-like alpha/beta-Hydrolases 11
Succinyl-CoA synthetase domains Acyl-CoA N-acyltransferases (Nat) 11
Rudiment single hybrid motif post-HMGL domain-like 11
MurCD N-terminal domain MurD-like peptide ligases, peptide-binding domain 11
Probable ACP-binding domain of malonyl-CoA ACP transacylase S-adenosyl-L-methionine-dependent methyltransferases 11
vWA-like beta-Roll 11
GAF domain-like Homodimeric domain of signal transducing histidine kinase 11
alpha-helical ferredoxin Respiratory nitrate reductase 1 gamma chain 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
Homocysteine S-methyltransferase Cobalamin (vitamin B12)-binding domain 11
Nucleic acid-binding proteins PheT/TilS domain 11
Thiolase-like alpha/beta-Hydrolases 11
Thioredoxin-like FAD/NAD(P)-binding domain 11
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Nucleic acid-binding proteins 11
ARM repeat ARM repeat 11
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Dihydropteroate synthetase-like Cobalamin (vitamin B12)-binding domain 11
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 11
Probable ACP-binding domain of malonyl-CoA ACP transacylase NAD(P)-binding Rossmann-fold domains 11
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 11
Rudiment single hybrid motif Single hybrid motif 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
TolB, N-terminal domain Tricorn protease N-terminal domain 11
Nucleotide-diphospho-sugar transferases RmlC-like cupins 11
Nucleotidyltransferase Nucleotidyltransferase substrate binding subunit/domain 11
Chorismate mutase II ACT-like 11
PreATP-grasp domain Aldolase 11
Periplasmic binding protein-like II Nucleotide cyclase 11
NAD(P)-binding Rossmann-fold domains Acetyl-CoA synthetase-like 11
Riboflavin synthase domain-like Riboflavin synthase domain-like 11
Glutathione synthetase ATP-binding domain-like Single hybrid motif 11
CheY-like SpoIIaa-like 11
Nucleotide-diphospho-sugar transferases IpsF-like 11
DNA breaking-rejoining enzymes MOP-like 11
P-loop containing nucleoside triphosphate hydrolases Isocitrate/Isopropylmalate dehydrogenase-like 11
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 11
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 11
PreATP-grasp domain Single hybrid motif 11
PTS system fructose IIA component-like Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 11
Homeodomain-like Probable bacterial effector-binding domain 11
Carbamate kinase-like PUA domain-like 11
Metallo-dependent phosphatases UDP-Glycosyltransferase/glycogen phosphorylase 11
Histidine-containing phosphotransfer domain, HPT domain SpoIIaa-like 11
Rho N-terminal domain-like Nucleic acid-binding proteins 11
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 11
Activating enzymes of the ubiquitin-like proteins FMN-dependent nitroreductase-like 11
PHP domain-like P-loop containing nucleoside triphosphate hydrolases 11
N-terminal domain of MutM-like DNA repair proteins Glucocorticoid receptor-like (DNA-binding domain) 11
CRISPR-associated protein CRISPR-associated protein 11
Tex N-terminal region-like Ribonuclease H-like 11
Chorismate mutase II EPT/RTPC-like 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
Aldolase Single hybrid motif 11
(Trans)glycosidases Protein kinase-like (PK-like) 11
PUA domain-like S-adenosyl-L-methionine-dependent methyltransferases 11
MgtE N-terminal domain-like CBS-domain pair 11
DHH phosphoesterases Nucleotidyltransferase 11
PrpR receptor domain-like Homeodomain-like 11
Nucleic acid-binding proteins S-adenosyl-L-methionine-dependent methyltransferases 11
FAD-linked oxidoreductase ALDH-like 11
MoeA C-terminal domain-like Periplasmic binding protein-like II 11
Thioredoxin-like Thioredoxin-like 11
S-adenosyl-L-methionine-dependent methyltransferases NAD(P)-binding Rossmann-fold domains 11
Class II aaRS and biotin synthetases Translation proteins 11
PTS system fructose IIA component-like Phosphohistidine domain 11
YbaK/ProRS associated domain Class II aaRS ABD-related 11
Metal cation-transporting ATPase, ATP-binding domain N Calcium ATPase, transmembrane domain M 11
PYP-like sensor domain (PAS domain) C-terminal effector domain of the bipartite response regulators 11
CBS-domain pair ACT-like 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
Tetrapyrrole methylase HemD-like 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
Nucleotide-diphospho-sugar transferases HD-domain/PDEase-like 11
Class II aaRS and biotin synthetases C-terminal domain of transcriptional repressors 11
Glycerol-3-phosphate (1)-acyltransferase Acyl-CoA N-acyltransferases (Nat) 11
Cryptochrome/photolyase, N-terminal domain Cryptochrome/photolyase FAD-binding domain 11
Rhodanese/Cell cycle control phosphatase Thioredoxin-like 11
Thiolase-like NAD(P)-binding Rossmann-fold domains 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
NAD(P)-binding Rossmann-fold domains Glutamyl tRNA-reductase dimerization domain 11
Ribosomal protein S5 domain 2-like HSP90 C-terminal domain 11
Multiheme cytochromes Multiheme cytochromes 11
Thioesterase/thiol ester dehydrase-isomerase Thioesterase/thiol ester dehydrase-isomerase 11
Acetyl-CoA synthetase-like alpha/beta-Hydrolases 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
YajQ-like YajQ-like 11
Trigger factor ribosome-binding domain FKBP-like 11
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 11
Thiolase-like S-adenosyl-L-methionine-dependent methyltransferases 11
CbiG N-terminal domain-like CobE/GbiG C-terminal domain-like 11
FwdE-like Molybdenum cofactor biosynthesis proteins 11
Cytochrome c oxidase subunit II-like, transmembrane region Cytochrome c 11
Nucleic acid-binding proteins ArfGap/RecO-like zinc finger 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
Nucleic acid-binding proteins Prokaryotic type KH domain (KH-domain type II) 11
TGS-like ACT-like 11
YrdC/RibB RibA-like 11
CheC-like Surface presentation of antigens (SPOA) 11
Nucleotidyltransferase TGS-like 11
P-loop containing nucleoside triphosphate hydrolases Phosphoglycerate mutase-like 11
TK C-terminal domain-like 4Fe-4S ferredoxins 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 11
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 11
Carbamate kinase-like ACT-like 11
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 11
Sensory domain-like HAMP domain-like 11
2Fe-2S ferredoxin-like CO dehydrogenase molybdoprotein N-domain-like 11
Tex N-terminal region-like Nucleic acid-binding proteins 11
Ribonuclease H-like RuvA domain 2-like 11
Phospholipase D/nuclease Phospholipase D/nuclease 11
Homocysteine S-methyltransferase Dihydropteroate synthetase-like 11
Alpha-L RNA-binding motif S-adenosyl-L-methionine-dependent methyltransferases 11
Lysozyme-like LysM domain 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
RuvA domain 2-like BRCT domain 11
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 11
MoeA N-terminal region -like Periplasmic binding protein-like II 11
4Fe-4S ferredoxins 4Fe-4S ferredoxins 11
Eukaryotic type KH-domain (KH-domain type I) HD-domain/PDEase-like 11
SirA-like DsrEFH-like 11
Nqo1 FMN-binding domain-like Nqo1 middle domain-like 11
Diaminopimelate epimerase-like Diaminopimelate epimerase-like 11
Regulator of G-protein signaling, RGS Homodimeric domain of signal transducing histidine kinase 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
Histidine-containing phosphotransfer domain, HPT domain Histidine-containing phosphotransfer domain, HPT domain 11
Nucleic acid-binding proteins DNA helicase RuvA subunit, C-terminal domain 11
Putative DNA-binding domain Probable bacterial effector-binding domain 11
HPr-like Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 11
Formyltransferase FMT C-terminal domain-like 11
Prokaryotic type I DNA topoisomerase Zinc beta-ribbon 11
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 11
HCP-like HCP-like 11
PrpR receptor domain-like P-loop containing nucleoside triphosphate hydrolases 11
P-loop containing nucleoside triphosphate hydrolases HRDC-like 11
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 11
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11
Acetyl-CoA synthetase-like Acetyl-CoA synthetase-like 11
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
UROD/MetE-like UROD/MetE-like 11
Glutamyl tRNA-reductase catalytic, N-terminal domain NAD(P)-binding Rossmann-fold domains 11
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 11
Aminopeptidase/glucanase lid domain Zn-dependent exopeptidases 11
Probable ACP-binding domain of malonyl-CoA ACP transacylase alpha/beta-Hydrolases 11
FliG FliG 11
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 11
Ribonuclease H-like Nucleic acid-binding proteins 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain ACT-like 11
CobE/GbiG C-terminal domain-like Tetrapyrrole methylase 11
FabD/lysophospholipase-like NAD(P)-binding Rossmann-fold domains 11
Nucleotidyltransferase substrate binding subunit/domain HD-domain/PDEase-like 11
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 11
RBP11-like subunits of RNA polymerase C-terminal domain of RNA polymerase alpha subunit 11
CO dehydrogenase ISP C-domain like CO dehydrogenase molybdoprotein N-domain-like 11
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 11
Transcription factor NusA, N-terminal domain Nucleic acid-binding proteins 11
PUA domain-like alpha/beta knot 11
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 11
NAD(P)-binding Rossmann-fold domains Siroheme synthase middle domains-like 11
Cytochrome c oxidase subunit II-like, transmembrane region Cupredoxins 11
Putative DNA-binding domain mu transposase, C-terminal domain 11
Carbon-nitrogen hydrolase Adenine nucleotide alpha hydrolases-like 11
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 11
Metallo-hydrolase/oxidoreductase Flavoproteins 11
Class II aaRS and biotin synthetases YbaK/ProRS associated domain 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 11
PreATP-grasp domain PreATP-grasp domain 11
Translation proteins ThrRS/AlaRS common domain 11
Aldolase Sensory domain-like 11
P-loop containing nucleoside triphosphate hydrolases CBS-domain pair 11
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 11
2Fe-2S ferredoxin-like Molybdenum cofactor-binding domain 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
Glutamine synthetase/guanido kinase GatB/YqeY motif 11
GAF domain-like EAL domain-like 11
Penicillin binding protein dimerisation domain Penicillin-binding protein 2x (pbp-2x), c-terminal domain 11
PTS system fructose IIA component-like HPr-like 11
Nucleic acid-binding proteins BRCT domain 11
"Winged helix" DNA-binding domain Class II aaRS and biotin synthetases 11
"Winged helix" DNA-binding domain S-adenosyl-L-methionine-dependent methyltransferases 11
Histidine-containing phosphotransfer domain, HPT domain Regulator of G-protein signaling, RGS 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
Flavoproteins 4Fe-4S ferredoxins 11
Glutamyl tRNA-reductase catalytic, N-terminal domain Glutamyl tRNA-reductase dimerization domain 11
GIY-YIG endonuclease RuvA domain 2-like 11
NAD(P)-binding Rossmann-fold domains MurD-like peptide ligases, peptide-binding domain 11
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 11
MurCD N-terminal domain MurD-like peptide ligases, catalytic domain 11
TPR-like Sporulation related repeat 11
HprK N-terminal domain-like Isocitrate/Isopropylmalate dehydrogenase-like 11
UbiD C-terminal domain-like UbiD C-terminal domain-like 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
Tetrapyrrole methylase S-adenosyl-L-methionine-dependent methyltransferases 11
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 11
FMN-binding split barrel UbiD C-terminal domain-like 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
PYP-like sensor domain (PAS domain) Histidine-containing phosphotransfer domain, HPT domain 11
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 11
Nucleotidylyl transferase Nucleic acid-binding proteins 11
Ribbon-helix-helix ACT-like 11
RuvA domain 2-like DNA helicase RuvA subunit, C-terminal domain 11
4'-phosphopantetheinyl transferase 4'-phosphopantetheinyl transferase 11
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 11
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 11
Tex N-terminal region-like RuvA domain 2-like 11
Prokaryotic type KH domain (KH-domain type II) Rad51 N-terminal domain-like 11
PK beta-barrel domain-like PK C-terminal domain-like 11
Nucleotide-diphospho-sugar transferases S-adenosyl-L-methionine-dependent methyltransferases 11
CoA-dependent acyltransferases alpha/beta-Hydrolases 11
Methyl-accepting chemotaxis protein (MCP) signaling domain Methyl-accepting chemotaxis protein (MCP) signaling domain 11

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