SUPERFAMILY 1.75 HMM library and genome assignments server

Domain combination pairs in Desulfococcus oleovorans Hxd3

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

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Adjacent domain pairs graph

Graph of adjacent domain pairs.


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Domain combination pairs

685 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 3825
Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase C-terminal domain-like 253
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 2312
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 2017
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 1916
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 198
Homodimeric domain of signal transducing histidine kinase CheY-like 1817
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheY-like 1817
Homeodomain-like Tetracyclin repressor-like, C-terminal domain 173
PYP-like sensor domain (PAS domain) CheY-like 1514
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 144
TPR-like TPR-like 138
Thiolase-like Thiolase-like 135
PYP-like sensor domain (PAS domain) PYP-like sensor domain (PAS domain) 1312
CheY-like P-loop containing nucleoside triphosphate hydrolases 113
Actin-like ATPase domain Actin-like ATPase domain 114
Formate dehydrogenase/DMSO reductase, domains 1-3 ADC-like 111
Cobalamin (vitamin B12)-binding domain Radical SAM enzymes 102
P-loop containing nucleoside triphosphate hydrolases Translation proteins 106
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 94
CheY-like Homeodomain-like 91
Ribosomal protein S5 domain 2-like P-loop containing nucleoside triphosphate hydrolases 84
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 86
GAF domain-like P-loop containing nucleoside triphosphate hydrolases 88
DNA methylase specificity domain DNA methylase specificity domain 83
Pectin lyase-like Pectin lyase-like 77
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 76
HAMP domain-like Homodimeric domain of signal transducing histidine kinase 73
HAMP domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 73
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 64
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 62
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 63
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 64
Translation proteins EF-G C-terminal domain-like 63
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 63
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 65
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 65
EF-G C-terminal domain-like EF-G C-terminal domain-like 52
Integrin alpha N-terminal domain Integrin alpha N-terminal domain 52
ACT-like ACT-like 53
NAD(P)-binding Rossmann-fold domains TrkA C-terminal domain-like 55
EspE N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 54
Adenine nucleotide alpha hydrolases-like Adenine nucleotide alpha hydrolases-like 51
PYP-like sensor domain (PAS domain) Nucleotide cyclase 54
Succinyl-CoA synthetase domains Succinyl-CoA synthetase domains 54
4Fe-4S ferredoxins FMN-dependent nitroreductase-like 41
HAD-like Calcium ATPase, transmembrane domain M 43
PYP-like sensor domain (PAS domain) Homeodomain-like 42
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 42
Calcium ATPase, transduction domain A HAD-like 43
ClpP/crotonase ClpP/crotonase 41
CheY-like HD-domain/PDEase-like 43
GAF domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 44
FAD/NAD(P)-binding domain 4Fe-4S ferredoxins 44
PurM N-terminal domain-like PurM C-terminal domain-like 43
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 43
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 43
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 43
MoeA N-terminal region -like Molybdenum cofactor biosynthesis proteins 42
CheY-like C-terminal effector domain of the bipartite response regulators 41
P-loop containing nucleoside triphosphate hydrolases MOP-like 41
PYP-like sensor domain (PAS domain) HD-domain/PDEase-like 42
Aldehyde ferredoxin oxidoreductase, N-terminal domain Aldehyde ferredoxin oxidoreductase, C-terminal domains 41
CheY-like CheY-like 44
Composite domain of metallo-dependent hydrolases Metallo-dependent hydrolases 43
PYP-like sensor domain (PAS domain) P-loop containing nucleoside triphosphate hydrolases 42
Molybdenum cofactor biosynthesis proteins MoeA C-terminal domain-like 42
GAF domain-like Homeodomain-like 44
Thioesterase/thiol ester dehydrase-isomerase Thioesterase/thiol ester dehydrase-isomerase 44
MoeA N-terminal region -like MoeA C-terminal domain-like 42
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 43
Succinyl-CoA synthetase domains Glutathione synthetase ATP-binding domain-like 43
Nitrite and sulphite reductase 4Fe-4S domain-like 4Fe-4S ferredoxins 32
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 32
PLP-binding barrel Alanine racemase C-terminal domain-like 32
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 32
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 32
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 32
Sensory domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 32
Translation proteins Ribosomal protein S5 domain 2-like 31
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 32
NAD(P)-binding Rossmann-fold domains Glutathione synthetase ATP-binding domain-like 32
NAD(P)-binding Rossmann-fold domains UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 31
Ferritin-like Rubredoxin-like 31
Class II aaRS and biotin synthetases Class II aaRS ABD-related 33
6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 31
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 32
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 32
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 32
Triger factor/SurA peptide-binding domain-like FKBP-like 33
Nucleic acid-binding proteins Nucleic acid-binding proteins 33
GAF domain-like Nucleotide cyclase 32
Transposase IS200-like TrpR-like 31
Methionine synthase domain Cobalamin (vitamin B12)-binding domain 31
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 31
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 33
NAD(P)-binding Rossmann-fold domains ACT-like 32
Ankyrin repeat Caspase-like 31
Nucleic acid-binding proteins RuvA domain 2-like 33
EF-G C-terminal domain-like Ribosomal protein S5 domain 2-like 31
Sensory domain-like Homodimeric domain of signal transducing histidine kinase 32
Protein kinase-like (PK-like) TPR-like 33
NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains 33
MurCD N-terminal domain MurD-like peptide ligases, catalytic domain 31
PUA domain-like Ribosomal protein S5 domain 2-like 31
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 31
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 32
Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), C-terminal domain 32
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 33
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 32
Lysozyme-like beta-lactamase/transpeptidase-like 32
MurCD N-terminal domain MurD-like peptide ligases, peptide-binding domain 31
TPR-like GAF domain-like 33
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 32
Acyl-CoA N-acyltransferases (Nat) Acyl-CoA N-acyltransferases (Nat) 33
"Winged helix" DNA-binding domain S-adenosyl-L-methionine-dependent methyltransferases 31
Sm-like ribonucleoproteins Mechanosensitive channel protein MscS (YggB), C-terminal domain 32
P-loop containing nucleoside triphosphate hydrolases TPR-like 33
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 32
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 32
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 32
TrkA C-terminal domain-like TrkA C-terminal domain-like 33
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 33
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 33
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 21
Nucleotidyltransferase Poly A polymerase C-terminal region-like 22
Serine metabolism enzymes domain ACT-like 21
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 22
Nucleotidyltransferase HD-domain/PDEase-like 22
Nitrite/Sulfite reductase N-terminal domain-like 4Fe-4S ferredoxins 21
Formate/glycerate dehydrogenase catalytic domain-like Serine metabolism enzymes domain 21
Carbamate kinase-like ACT-like 22
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 21
Cobalamin (vitamin B12)-dependent enzymes Cobalamin (vitamin B12)-binding domain 22
Protein kinase-like (PK-like) GAF domain-like 22
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 21
Class II aaRS and biotin synthetases ThrRS/AlaRS common domain 22
Histidine-containing phosphotransfer domain, HPT domain CheW-like 22
NagB/RpiA/CoA transferase-like NagB/RpiA/CoA transferase-like 21
TK C-terminal domain-like 4Fe-4S ferredoxins 22
Periplasmic binding protein-like II PYP-like sensor domain (PAS domain) 22
Homeodomain-like Homeodomain-like 22
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 21
NagB/RpiA/CoA transferase-like Acyl-CoA N-acyltransferases (Nat) 21
MgtE N-terminal domain-like MgtE membrane domain-like 21
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 21
2Fe-2S ferredoxin-like Actin-like ATPase domain 21
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 21
Periplasmic binding protein-like II ACT-like 21
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 21
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 21
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 21
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 22
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 22
CheY-like Methylesterase CheB, C-terminal domain 22
4Fe-4S ferredoxins P-loop containing nucleoside triphosphate hydrolases 21
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
DHH phosphoesterases CBS-domain pair 22
Chorismate mutase II ACT-like 21
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 22
RuvA domain 2-like P-loop containing nucleoside triphosphate hydrolases 21
TTHA1013/TTHA0281-like Ribbon-helix-helix 21
MgtE N-terminal domain-like CBS-domain pair 21
Formate/glycerate dehydrogenase catalytic domain-like ACT-like 21
Thiolase-like NAD(P)-binding Rossmann-fold domains 22
Chemotaxis receptor methyltransferase CheR, N-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 21
Putative DNA-binding domain Tetracyclin repressor-like, C-terminal domain 21
HMA, heavy metal-associated domain HAD-like 21
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 21
Periplasmic binding protein-like II ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 22
NAD(P)-binding Rossmann-fold domains Serine metabolism enzymes domain 21
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 22
Protein kinase-like (PK-like) P-loop containing nucleoside triphosphate hydrolases 22
"Winged helix" DNA-binding domain GntR ligand-binding domain-like 22
PYP-like sensor domain (PAS domain) GAF domain-like 22
Phospholipase D/nuclease Phospholipase D/nuclease 22
Nucleotidyltransferase ACT-like 22
Adenine nucleotide alpha hydrolases-like DHS-like NAD/FAD-binding domain 21
CBS-domain pair MgtE membrane domain-like 21
Cadherin-like Carboxypeptidase regulatory domain-like 22
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Adenine nucleotide alpha hydrolases-like 21
PreATP-grasp domain PreATP-grasp domain 21
Thiolase-like FabD/lysophospholipase-like 22
Voltage-gated potassium channels NAD(P)-binding Rossmann-fold domains 22
Thiamin diphosphate-binding fold (THDP-binding) Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 22
P-loop containing nucleoside triphosphate hydrolases Restriction endonuclease-like 22
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 22
Clc chloride channel CBS-domain pair 22
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB transmembrane domain 22
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 22
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 22
Histidine-containing phosphotransfer domain, HPT domain Homodimeric domain of signal transducing histidine kinase 22
GAF domain-like Homodimeric domain of signal transducing histidine kinase 22
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB transmembrane domain 22
Penicillin binding protein dimerisation domain beta-lactamase/transpeptidase-like 21
Trm112p-like S-adenosyl-L-methionine-dependent methyltransferases 22
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 21
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 21
Voltage-gated potassium channels TrkA C-terminal domain-like 22
tRNA-binding arm Class II aaRS and biotin synthetases 21
NAD(P)-binding Rossmann-fold domains SCP-like 22
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheW-like 22
TK C-terminal domain-like Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 22
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 22
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 21
Periplasmic binding protein-like II Homodimeric domain of signal transducing histidine kinase 22
FMN-dependent nitroreductase-like FMN-dependent nitroreductase-like 22
alpha-helical ferredoxin Respiratory nitrate reductase 1 gamma chain 22
Putative DNA-binding domain Homeodomain-like 21
ParB/Sulfiredoxin KorB DNA-binding domain-like 21
HAMP domain-like PYP-like sensor domain (PAS domain) 21
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 21
Cadherin-like NHL repeat 22
S-adenosyl-L-methionine-dependent methyltransferases S-adenosyl-L-methionine-dependent methyltransferases 22
Sensory domain-like PYP-like sensor domain (PAS domain) 21
L30e-like alpha/beta knot 22
Chaperone J-domain HSP40/DnaJ peptide-binding domain 22
alpha-helical ferredoxin Nucleotide-binding domain 22
Nucleic acid-binding proteins Translation proteins SH3-like domain 22
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 21
Thiamin diphosphate-binding fold (THDP-binding) 4Fe-4S ferredoxins 22
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 22
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 21
Alpha-L RNA-binding motif Pseudouridine synthase 21
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 21
PUA domain-like Nucleotidylyl transferase 22
Histidine-containing phosphotransfer domain, HPT domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 22
Homodimeric domain of signal transducing histidine kinase CheW-like 22
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 21
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 21
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 22
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 21
HD-domain/PDEase-like ACT-like 22
(Trans)glycosidases Glycosyl hydrolase domain 22
Carboxypeptidase regulatory domain-like NHL repeat 22
PreATP-grasp domain Methylglyoxal synthase-like 21
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 22
Chorismate mutase II Periplasmic binding protein-like II 21
6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 22
PreATP-grasp domain Rudiment single hybrid motif 22
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 22
TGS-like Class II aaRS ABD-related 11
Prokaryotic type I DNA topoisomerase Zinc beta-ribbon 11
Peptide methionine sulfoxide reductase Mss4-like 11
Nucleic acid-binding proteins Rad51 N-terminal domain-like 11
DNA ligase/mRNA capping enzyme, catalytic domain RuvA domain 2-like 11
Translation proteins PRC-barrel domain 11
Prokaryotic type KH domain (KH-domain type II) Rad51 N-terminal domain-like 11
Thiolase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 11
S-adenosyl-L-methionine-dependent methyltransferases alpha/beta knot 11
Alpha-L RNA-binding motif S-adenosyl-L-methionine-dependent methyltransferases 11
TerB-like Chaperone J-domain 11
Nucleic acid-binding proteins ArfGap/RecO-like zinc finger 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases Smc hinge domain 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
P-loop containing nucleoside triphosphate hydrolases RmlC-like cupins 11
C-terminal UvrC-binding domain of UvrB RuvA domain 2-like 11
FMN-binding split barrel UbiD C-terminal domain-like 11
ADC synthase D-aminoacid aminotransferase-like PLP-dependent enzymes 11
Bet v1-like NAD(P)-binding Rossmann-fold domains 11
Rubredoxin-like Superoxide reductase-like 11
AraD/HMP-PK domain-like NAD(P)-binding Rossmann-fold domains 11
HD-domain/PDEase-like TGS-like 11
PUA domain-like alpha/beta knot 11
Putative DNA-binding domain Anticodon-binding domain of PheRS 11
UDP-Glycosyltransferase/glycogen phosphorylase P-loop containing nucleoside triphosphate hydrolases 11
UDP-Glycosyltransferase/glycogen phosphorylase HAD-like 11
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 11
Alpha subunit of glutamate synthase, C-terminal domain FAD/NAD(P)-binding domain 11
Translation proteins "Winged helix" DNA-binding domain 11
Putative isomerase YbhE 3-carboxy-cis,cis-mucoante lactonizing enzyme 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 11
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
Ribonuclease H-like HRDC-like 11
Calcium ATPase, transduction domain A Metal cation-transporting ATPase, ATP-binding domain N 11
TrmE connector domain P-loop containing nucleoside triphosphate hydrolases 11
GroEL equatorial domain-like GroEL apical domain-like 11
CheC-like CheY-like 11
Nucleotide-diphospho-sugar transferases RmlC-like cupins 11
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases CarD-like 11
Sensory domain-like HAMP domain-like 11
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 11
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 11
Histidine-containing phosphotransfer domain, HPT domain CheY-like 11
MoeA N-terminal region -like Periplasmic binding protein-like II 11
PK beta-barrel domain-like PK C-terminal domain-like 11
HAMP domain-like Nucleotide cyclase 11
Nucleotidyltransferase substrate binding subunit/domain HD-domain/PDEase-like 11
Radical SAM enzymes "Winged helix" DNA-binding domain 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
RBP11-like subunits of RNA polymerase C-terminal domain of RNA polymerase alpha subunit 11
Ribosomal protein L6 Ribosomal protein L6 11
all-alpha NTP pyrophosphatases all-alpha NTP pyrophosphatases 11
DHH phosphoesterases Nucleotidyltransferase 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 11
Thiamin phosphate synthase PurM N-terminal domain-like 11
Class II aaRS ABD-related C-terminal domain of ProRS 11
P-loop containing nucleoside triphosphate hydrolases C-terminal UvrC-binding domain of UvrB 11
Thiolase-like Nucleic acid-binding proteins 11
TPR-like Periplasmic binding protein-like I 11
PDZ domain-like PDZ domain-like 11
YhbC-like, N-terminal domain YhbC-like, C-terminal domain 11
GAF domain-like HlyD-like secretion proteins 11
4Fe-4S ferredoxins FMN-linked oxidoreductases 11
TGS-like ThrRS/AlaRS common domain 11
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 11
Cupredoxins Cupredoxins 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 11
Actin-like ATPase domain TPR-like 11
LysM domain LysM domain 11
Hypothetical protein PA1324 OmpA-like 11
LeuD/IlvD-like Aconitase iron-sulfur domain 11
FabD/lysophospholipase-like NAD(P)-binding Rossmann-fold domains 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Nucleic acid-binding proteins 11
Metallo-hydrolase/oxidoreductase Flavoproteins 11
TSP type-3 repeat OmpA-like 11
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 11
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 11
Thioredoxin-like ARM repeat 11
Ribosomal protein S5 domain 2-like HSP90 C-terminal domain 11
Integrin alpha N-terminal domain Fucose-specific lectin 11
2Fe-2S ferredoxin-like alpha-helical ferredoxin 11
2Fe-2S ferredoxin-like Riboflavin synthase domain-like 11
Adenine nucleotide alpha hydrolases-like MesJ substrate recognition domain-like 11
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
S-adenosyl-L-methionine-dependent methyltransferases L30e-like 11
P-loop containing nucleoside triphosphate hydrolases Ribonuclease H-like 11
MFS general substrate transporter Glycerol-3-phosphate (1)-acyltransferase 11
GroEL equatorial domain-like GroEL-intermediate domain like 11
DnaJ/Hsp40 cysteine-rich domain DnaJ/Hsp40 cysteine-rich domain 11
Tetrapyrrole methylase HemD-like 11
Nucleic acid-binding proteins Putative DNA-binding domain 11
post-AAA+ oligomerization domain-like post-AAA+ oligomerization domain-like 11
Tex N-terminal region-like Ribonuclease H-like 11
Tex N-terminal region-like Nucleic acid-binding proteins 11
Metal cation-transporting ATPase, ATP-binding domain N Calcium ATPase, transmembrane domain M 11
GlnB-like CBS-domain pair 11
Glutamine synthetase/guanido kinase GatB/YqeY motif 11
S-adenosyl-L-methionine-dependent methyltransferases DNA methylase specificity domain 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 11
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 11
Pili subunits GspK insert domain-like 11
HRDC-like HRDC-like 11
Cadherin-like Calcium-dependent phosphotriesterase 11
Carboxypeptidase regulatory domain-like Calcium-dependent phosphotriesterase 11
Nucleotidylyl transferase tRNA-binding arm 11
Thiamin phosphate synthase PurM C-terminal domain-like 11
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 11
Hypothetical protein PA1324 Carboxypeptidase regulatory domain-like 11
Nucleic acid-binding proteins NAD(P)-binding Rossmann-fold domains 11
OMPA-like OmpA-like 11
DPP6 N-terminal domain-like TSP type-3 repeat 11
Nucleotidylyl transferase Riboflavin kinase-like 11
Rhodanese/Cell cycle control phosphatase Ferritin-like 11
DNA clamp DNA clamp 11
"Winged helix" DNA-binding domain LexA/Signal peptidase 11
RNase III domain-like dsRNA-binding domain-like 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
Fibronectin type III Fibronectin type III 11
PHP domain-like P-loop containing nucleoside triphosphate hydrolases 11
FabD/lysophospholipase-like ACP-like 11
Aldolase post-HMGL domain-like 11
post-HMGL domain-like Single hybrid motif 11
DNA-glycosylase Nudix 11
E set domains (Trans)glycosidases 11
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 11
Flavoproteins Phosphotyrosine protein phosphatases I 11
Hypothetical protein PA1324 Hypothetical protein PA1324 11
PurS-like PurM N-terminal domain-like 11
CheW-like CheY-like 11
Formyltransferase FMT C-terminal domain-like 11
Eukaryotic type KH-domain (KH-domain type I) Nucleic acid-binding proteins 11
Rhodanese/Cell cycle control phosphatase Rhodanese/Cell cycle control phosphatase 11
Prokaryotic type KH domain (KH-domain type II) Prokaryotic type KH domain (KH-domain type II) 11
OMPA-like TSP type-3 repeat 11
Hypothetical protein PA1324 Porins 11
ACP-like NAD(P)-binding Rossmann-fold domains 11
Phosphotyrosine protein phosphatases I Homeodomain-like 11
Tex N-terminal region-like RuvA domain 2-like 11
Aminopeptidase/glucanase lid domain Zn-dependent exopeptidases 11
Class II aaRS and biotin synthetases C-terminal domain of transcriptional repressors 11
FabD/lysophospholipase-like Thioesterase/thiol ester dehydrase-isomerase 11
NHL repeat Fibronectin type III 11
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 11
Probable ACP-binding domain of malonyl-CoA ACP transacylase ACP-like 11
Rudiment single hybrid motif N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) 11
Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 4Fe-4S ferredoxins 11
Transcription factor NusA, N-terminal domain Rad51 N-terminal domain-like 11
DnaK suppressor protein DksA, alpha-hairpin domain Glucocorticoid receptor-like (DNA-binding domain) 11
Lysozyme-like LysM domain 11
Dihydropteroate synthetase-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
Nucleic acid-binding proteins GAD domain-like 11
Galactose-binding domain-like Homeodomain-like 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
Thiolase-like Thioesterase/thiol ester dehydrase-isomerase 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
Acyl-CoA N-acyltransferases (Nat) Carbon-nitrogen hydrolase 11
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 11
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 11
Rho N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
NAD(P)-binding Rossmann-fold domains ClpP/crotonase 11
Protein kinase-like (PK-like) C-type lectin-like 11
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
TPR-like Homeodomain-like 11
C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase Caspase-like 11
Flavoproteins 4Fe-4S ferredoxins 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
FKBP-like beta and beta-prime subunits of DNA dependent RNA-polymerase 11
FAD/NAD(P)-binding domain Rhodanese/Cell cycle control phosphatase 11
THUMP domain-like S-adenosyl-L-methionine-dependent methyltransferases 11
SMAD/FHA domain EAL domain-like 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
4Fe-4S ferredoxins 4Fe-4S ferredoxins 11
GroES-like NAD(P)-binding Rossmann-fold domains 11
PYP-like sensor domain (PAS domain) EAL domain-like 11
CBS-domain pair TrkA C-terminal domain-like 11
Nucleotidylyl transferase Nucleic acid-binding proteins 11
Cytidine deaminase-like Dihydrofolate reductase-like 11
Trypsin-like serine proteases PDZ domain-like 11
Band 7/SPFH domain Band 7/SPFH domain 11
Cobalamin (vitamin B12)-binding domain P-loop containing nucleoside triphosphate hydrolases 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
Nqo1 FMN-binding domain-like alpha-helical ferredoxin 11
S-adenosyl-L-methionine-dependent methyltransferases NAD(P)-binding Rossmann-fold domains 11
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 11
4Fe-4S ferredoxins Formate dehydrogenase/DMSO reductase, domains 1-3 11
PheT/TilS domain Putative DNA-binding domain 11
ACP-like ACP-like 11
Periplasmic binding protein-like II GlnB-like 11
YWTD domain Acyl-CoA N-acyltransferases (Nat) 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
Periplasmic binding protein-like II Periplasmic binding protein-like II 11
CBS-domain pair Poly A polymerase C-terminal region-like 11
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
Eukaryotic type KH-domain (KH-domain type I) HD-domain/PDEase-like 11
NHL repeat NHL repeat 11
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 11
Nucleotidylyl transferase P-loop containing nucleoside triphosphate hydrolases 11
Aspartate/glutamate racemase Aspartate/glutamate racemase 11
Rhomboid-like HSP40/DnaJ peptide-binding domain 11
Zinc beta-ribbon DNA primase core 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 11
YjeF N-terminal domain-like Ribokinase-like 11
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 11
Ribonuclease H-like Nucleic acid-binding proteins 11
Glutathione synthetase ATP-binding domain-like N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) 11
RuvA domain 2-like RuvA domain 2-like 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain ACT-like 11
Aconitase B, N-terminal domain Aconitase iron-sulfur domain 11
Staphylococcal nuclease Ada DNA repair protein, N-terminal domain (N-Ada 10) 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
CBS-domain pair Nucleotidyltransferase 11
TGS-like ACT-like 11
Epsilon subunit of F1F0-ATP synthase N-terminal domain Epsilon subunit of F1F0-ATP synthase C-terminal domain 11
Phosphofructokinase Phosphofructokinase 11
Nucleotidyltransferase Nucleotidyltransferase substrate binding subunit/domain 11
Periplasmic binding protein-like II CheY-like 11
Enolase N-terminal domain-like Enolase C-terminal domain-like 11
Tryptophan synthase beta subunit-like PLP-dependent enzymes Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
Cytochrome c Multiheme cytochromes 11
Glutathione synthetase ATP-binding domain-like Phosphoenolpyruvate/pyruvate domain 11
Ribonuclease H-like RuvA domain 2-like 11
Thiolase-like ACP-like 11
lambda repressor-like DNA-binding domains RmlC-like cupins 11
Alpha subunit of glutamate synthase, C-terminal domain 4Fe-4S ferredoxins 11
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain "Winged helix" DNA-binding domain 11
Nucleic acid-binding proteins SCP-like 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
4Fe-4S ferredoxins Nucleotide-binding domain 11
Ankyrin repeat Ankyrin repeat 11
Galactose mutarotase-like (Trans)glycosidases 11
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 11
Aldolase Single hybrid motif 11
Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases 11
FAD-binding/transporter-associated domain-like Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain 11
Phosphotyrosine protein phosphatases I P-loop containing nucleoside triphosphate hydrolases 11
Zinc beta-ribbon Zinc beta-ribbon 11
Protein kinase-like (PK-like) Protein kinase-like (PK-like) 11
ADP-ribosylglycohydrolase (Phosphotyrosine protein) phosphatases II 11
Calcium-dependent phosphotriesterase NHL repeat 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase HSP90 C-terminal domain 11
Nucleic acid-binding proteins PheT/TilS domain 11
Lysozyme-like Nucleic acid-binding proteins 11
Homo-oligomeric flavin-containing Cys decarboxylases, HFCD CoaB-like 11
P-loop containing nucleoside triphosphate hydrolases CBS-domain pair 11
Nucleic acid-binding proteins Prokaryotic type KH domain (KH-domain type II) 11
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
NAD(P)-binding Rossmann-fold domains Phoshotransferase/anion transport protein 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 11
P-loop containing nucleoside triphosphate hydrolases Nucleotide cyclase 11
Glycerol-3-phosphate (1)-acyltransferase alpha/beta-Hydrolases 11
NAD(P)-binding Rossmann-fold domains PLP-dependent transferases 11
Thiolase-like SCP-like 11
Rho N-terminal domain-like Nucleic acid-binding proteins 11
Transcription factor NusA, N-terminal domain Prokaryotic type KH domain (KH-domain type II) 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Nucleic acid-binding proteins 11
6-phosphogluconate dehydrogenase C-terminal domain-like ClpP/crotonase 11
TolB, N-terminal domain Tricorn protease N-terminal domain 11
E set domains Glycosyl hydrolase domain 11
Riboflavin synthase domain-like Riboflavin synthase domain-like 11
TPR-like Nucleotide cyclase 11
RuvA domain 2-like MCP/YpsA-like 11
L,D-transpeptidase catalytic domain-like NTF2-like 11
GAF domain-like HD-domain/PDEase-like 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
CBS-domain pair FAD-binding/transporter-associated domain-like 11
4Fe-4S ferredoxins Acetyl-CoA synthetase-like 11
FKBP-like S-adenosyl-L-methionine-dependent methyltransferases 11
GIY-YIG endonuclease RuvA domain 2-like 11
PheT/TilS domain Class II aaRS and biotin synthetases 11
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 11
MoeA C-terminal domain-like Periplasmic binding protein-like II 11
Thioesterase/thiol ester dehydrase-isomerase NAD(P)-binding Rossmann-fold domains 11
Glutamyl tRNA-reductase catalytic, N-terminal domain Glutamyl tRNA-reductase dimerization domain 11
PurS-like PurS-like 11
"Winged helix" DNA-binding domain C-terminal domain of transcriptional repressors 11
Carbamate kinase-like PUA domain-like 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 11
SirA-like DsrEFH-like 11
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 11
Transcription factor NusA, N-terminal domain Nucleic acid-binding proteins 11
PDZ domain-like ClpP/crotonase 11
F1F0 ATP synthase subunit C F1F0 ATP synthase subunit C 11
2Fe-2S ferredoxin-like Formate dehydrogenase/DMSO reductase, domains 1-3 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
Aconitase B, N-terminal domain LeuD/IlvD-like 11
Methyl-accepting chemotaxis protein (MCP) signaling domain Methyl-accepting chemotaxis protein (MCP) signaling domain 11
Protein kinase-like (PK-like) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Nucleotide-binding domain Nucleotide-binding domain 11
RuvA domain 2-like BRCT domain 11
(Trans)glycosidases Six-hairpin glycosidases 11
Multiheme cytochromes Multiheme cytochromes 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 11
TPR-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 11
Adenine nucleotide alpha hydrolases-like PheT/TilS domain 11
"Winged helix" DNA-binding domain Periplasmic binding protein-like II 11
PIN domain-like DNA/RNA polymerases 11
S-adenosyl-L-methionine-dependent methyltransferases P-loop containing nucleoside triphosphate hydrolases 11
Acyl-CoA N-acyltransferases (Nat) Arginase/deacetylase 11
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
CheY-like CBS-domain pair 11
Nucleic acid-binding proteins S-adenosyl-L-methionine-dependent methyltransferases 11
PEP carboxykinase N-terminal domain PEP carboxykinase-like 11
NAD(P)-binding Rossmann-fold domains Siroheme synthase middle domains-like 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 11
SIS domain CBS-domain pair 11
Metallo-hydrolase/oxidoreductase SCP-like 11
2Fe-2S ferredoxin-like Ferredoxin reductase-like, C-terminal NADP-linked domain 11
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 11
cAMP-binding domain-like "Winged helix" DNA-binding domain 11
Nucleotide cyclase EAL domain-like 11
CBS-domain pair CBS-domain pair 11
4Fe-4S ferredoxins ARM repeat 11
PIN domain-like Ribonuclease H-like 11
Probable ACP-binding domain of malonyl-CoA ACP transacylase NAD(P)-binding Rossmann-fold domains 11
Nucleic acid-binding proteins Anticodon-binding domain of PheRS 11
CheY-like EspE N-terminal domain-like 11
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 11
P-loop containing nucleoside triphosphate hydrolases lambda repressor-like DNA-binding domains 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Eukaryotic type KH-domain (KH-domain type I) 11
Invasin/intimin cell-adhesion fragments Invasin/intimin cell-adhesion fragments 11
GroEL-intermediate domain like GroEL apical domain-like 11
Phosphotyrosine protein phosphatases I PYP-like sensor domain (PAS domain) 11
NAD(P)-binding Rossmann-fold domains Glutamyl tRNA-reductase dimerization domain 11
Ribonuclease H-like DNA/RNA polymerases 11
Translation proteins Translation proteins 11
Fibronectin type III TPR-like 11
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 11
Heme-dependent peroxidases Heme-dependent peroxidases 11
CarD-like TRCF domain-like 11
GIY-YIG endonuclease C-terminal UvrC-binding domain of UvrB 11
Glucocorticoid receptor-like (DNA-binding domain) P-loop containing nucleoside triphosphate hydrolases 11
TrkA C-terminal domain-like Phoshotransferase/anion transport protein 11
PYP-like sensor domain (PAS domain) C-terminal effector domain of the bipartite response regulators 11
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 11
Thioesterase/thiol ester dehydrase-isomerase SCP-like 11
P-loop containing nucleoside triphosphate hydrolases TrpR-like 11
5' to 3' exonuclease, C-terminal subdomain Ribonuclease H-like 11
Diaminopimelate epimerase-like Diaminopimelate epimerase-like 11
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 11
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 11
MesJ substrate recognition domain-like PheT/TilS domain 11
Nucleotidyltransferase TGS-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
P-loop containing nucleoside triphosphate hydrolases ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
LigB-like AMMECR1-like 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphohistidine domain 11
Class II aaRS and biotin synthetases C-terminal domain of ProRS 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphoenolpyruvate/pyruvate domain 11
NHL repeat TPR-like 11
YrdC/RibB RibA-like 11
Calcium-dependent phosphotriesterase Calcium-dependent phosphotriesterase 11
P-loop containing nucleoside triphosphate hydrolases TGS-like 11
2Fe-2S ferredoxin-like 4Fe-4S ferredoxins 11
Nucleic acid-binding proteins BRCT domain 11
Ribonuclease PH domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
L9 N-domain-like Ribosomal protein L9 C-domain 11
DHH phosphoesterases Poly A polymerase C-terminal region-like 11
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 11
DNA methylase specificity domain P-loop containing nucleoside triphosphate hydrolases 11
Chaperone J-domain EspE N-terminal domain-like 11
Tryptophan synthase beta subunit-like PLP-dependent enzymes Nucleotidylyl transferase 11
5' to 3' exonuclease, C-terminal subdomain DNA/RNA polymerases 11
GAF domain-like CheY-like 11
Molybdenum cofactor biosynthesis proteins Periplasmic binding protein-like II 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
lambda integrase-like, N-terminal domain DNA breaking-rejoining enzymes 11
Type II DNA topoisomerase Type II DNA topoisomerase 11
Clc chloride channel TrkA C-terminal domain-like 11
Molybdenum cofactor biosynthesis proteins CinA-like 11
Class II aaRS and biotin synthetases Translation proteins 11
Nucleotide-diphospho-sugar transferases Protein kinase-like (PK-like) 11
Nucleic acid-binding proteins HD-domain/PDEase-like 11
P-loop containing nucleoside triphosphate hydrolases Cobalamin (vitamin B12)-dependent enzymes 11
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 11
Eukaryotic type KH-domain (KH-domain type I) P-loop containing nucleoside triphosphate hydrolases 11
Barwin-like endoglucanases Sporulation related repeat 11
Cytochrome c Cytochrome c 11
TGS-like Class II aaRS and biotin synthetases 11
Nucleotidyltransferase substrate binding subunit/domain ACT-like 11
beta-Roll beta-Roll 11
Periplasmic binding protein-like II Lysozyme-like 11
N-terminal domain of DnaB helicase P-loop containing nucleoside triphosphate hydrolases 11
PheT/TilS domain Anticodon-binding domain of PheRS 11
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 11
Metal cation-transporting ATPase, ATP-binding domain N HAD-like 11
GAF domain-like EspE N-terminal domain-like 11
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
PreATP-grasp domain N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) 11
FMN-linked oxidoreductases FAD/NAD(P)-binding domain 11
Glutathione synthetase ATP-binding domain-like Acyl-CoA N-acyltransferases (Nat) 11
2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain Alkaline phosphatase-like 11
FAD/NAD-linked reductases, dimerisation (C-terminal) domain Rhodanese/Cell cycle control phosphatase 11
MgtE N-terminal domain-like MgtE N-terminal domain-like 11
Nucleic acid-binding proteins beta-lactamase/transpeptidase-like 11
Ribosomal protein S5 domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
Translation proteins Initiation factor IF2/eIF5b, domain 3 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
Thioredoxin-like Six-hairpin glycosidases 11
Class I glutamine amidotransferase-like LD-carboxypeptidase A C-terminal domain-like 11
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 11
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 11
Trigger factor ribosome-binding domain FKBP-like 11
CheW-like CheW-like 11
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 11
PKD domain Fibronectin type III 11
Glutamyl tRNA-reductase catalytic, N-terminal domain NAD(P)-binding Rossmann-fold domains 11
vWA-like Quinoprotein alcohol dehydrogenase-like 11
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 11
OmpA-like Porins 11
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 11
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 11
NAD(P)-binding Rossmann-fold domains 4Fe-4S ferredoxins 11
Translation proteins ThrRS/AlaRS common domain 11
4Fe-4S ferredoxins Radical SAM enzymes 11
4Fe-4S ferredoxins alpha-helical ferredoxin 11
PurS-like PurM C-terminal domain-like 11
GreA transcript cleavage protein, N-terminal domain FKBP-like 11
RuvA domain 2-like JAB1/MPN domain 11
Galactose mutarotase-like Glycosyl hydrolase domain 11
Class II aaRS and biotin synthetases GAD domain-like 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
UbiD C-terminal domain-like UbiD C-terminal domain-like 11
Fic-like "Winged helix" DNA-binding domain 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 11
Protein kinase-like (PK-like) Nucleotide cyclase 11
Sec-C motif Creatinase/aminopeptidase 11
Nucleotidylyl transferase Ribosomal protein L25-like 11

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