SUPERFAMILY 1.75 HMM library and genome assignments server

Domain combination pairs in Desulfarculus baarsii DSM 2075

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

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Adjacent domain pairs graph

Graph of adjacent domain pairs.


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Domain combination pairs

661 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 5736
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 4230
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 4028
PYP-like sensor domain (PAS domain) PYP-like sensor domain (PAS domain) 3629
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 258
CheY-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 2518
CheY-like Homodimeric domain of signal transducing histidine kinase 2417
CheY-like PYP-like sensor domain (PAS domain) 2418
Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase C-terminal domain-like 233
CheY-like P-loop containing nucleoside triphosphate hydrolases 215
Homeodomain-like Tetracyclin repressor-like, C-terminal domain 181
CheY-like Homeodomain-like 183
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 1811
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 156
Actin-like ATPase domain Actin-like ATPase domain 132
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 114
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 105
Thiolase-like Thiolase-like 102
TPR-like TPR-like 105
GAF domain-like Homodimeric domain of signal transducing histidine kinase 109
P-loop containing nucleoside triphosphate hydrolases Translation proteins 95
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 95
GAF domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 98
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein S5 domain 2-like 96
HAMP domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 85
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 82
Homeodomain-like Ribonuclease H-like 81
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 72
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 72
HAMP domain-like Homodimeric domain of signal transducing histidine kinase 74
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 72
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB transmembrane domain 72
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB transmembrane domain 72
Sensory domain-like Methyl-accepting chemotaxis protein (MCP) signaling domain 74
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 73
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 77
Metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 64
"Winged helix" DNA-binding domain S-adenosyl-L-methionine-dependent methyltransferases 62
PYP-like sensor domain (PAS domain) GAF domain-like 66
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 63
PYP-like sensor domain (PAS domain) Nucleotide cyclase 66
GAF domain-like CheY-like 66
Formate dehydrogenase/DMSO reductase, domains 1-3 ADC-like 61
Homeodomain-like Homeodomain-like 61
alpha-helical ferredoxin alpha-helical ferredoxin 65
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 65
NagB/RpiA/CoA transferase-like NagB/RpiA/CoA transferase-like 52
PurM N-terminal domain-like PurM C-terminal domain-like 52
EF-G C-terminal domain-like EF-G C-terminal domain-like 52
Translation proteins EF-G C-terminal domain-like 52
ClpP/crotonase ClpP/crotonase 52
4Fe-4S ferredoxins Nucleotide-binding domain 54
Nucleotide cyclase EAL domain-like 55
alpha-helical ferredoxin Nucleotide-binding domain 55
HAMP domain-like PYP-like sensor domain (PAS domain) 53
2Fe-2S ferredoxin-like 4Fe-4S ferredoxins 52
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 52
NAD(P)-binding Rossmann-fold domains TrkA C-terminal domain-like 54
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 53
CheY-like TPR-like 53
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 54
PYP-like sensor domain (PAS domain) Homeodomain-like 43
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 43
PYP-like sensor domain (PAS domain) P-loop containing nucleoside triphosphate hydrolases 43
PYP-like sensor domain (PAS domain) EAL domain-like 44
Succinyl-CoA synthetase domains Succinyl-CoA synthetase domains 43
Calcium ATPase, transduction domain A HAD-like 44
FKBP-like Triger factor/SurA peptide-binding domain-like 43
Sm-like ribonucleoproteins Mechanosensitive channel protein MscS (YggB), C-terminal domain 44
lambda repressor-like DNA-binding domains RmlC-like cupins 42
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 43
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 41
FAD/NAD(P)-binding domain 4Fe-4S ferredoxins 43
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 32
MurCD N-terminal domain MurD-like peptide ligases, catalytic domain 31
Nqo1 FMN-binding domain-like 4Fe-4S ferredoxins 31
Thioredoxin-like Nqo1C-terminal domain-like 31
4Fe-4S ferredoxins Formate dehydrogenase/DMSO reductase, domains 1-3 31
Glutathione synthetase ATP-binding domain-like Succinyl-CoA synthetase domains 33
Nucleotide-binding domain FAD/NAD(P)-binding domain 32
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 32
2Fe-2S ferredoxin-like Formate dehydrogenase/DMSO reductase, domains 1-3 31
Class II aaRS and biotin synthetases Class II aaRS ABD-related 33
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 32
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 32
Adenine nucleotide alpha hydrolases-like Adenine nucleotide alpha hydrolases-like 32
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 32
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 33
Nucleotide-diphospho-sugar transferases TPR-like 32
EF-G C-terminal domain-like Ribosomal protein S5 domain 2-like 31
Histidine-containing phosphotransfer domain, HPT domain Homodimeric domain of signal transducing histidine kinase 33
Nqo1 middle domain-like 4Fe-4S ferredoxins 31
Thioredoxin-like Nqo1 FMN-binding domain-like 31
Nucleic acid-binding proteins RuvA domain 2-like 33
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 32
Nucleotidyltransferase Poly A polymerase C-terminal region-like 32
ClpP/crotonase NAD(P)-binding Rossmann-fold domains 33
4Fe-4S ferredoxins Nitrite and sulphite reductase 4Fe-4S domain-like 32
Adenine nucleotide alpha hydrolases-like DHS-like NAD/FAD-binding domain 32
ACT-like ACT-like 32
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 32
MurCD N-terminal domain MurD-like peptide ligases, peptide-binding domain 31
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 32
ClpP/crotonase 6-phosphogluconate dehydrogenase C-terminal domain-like 33
Phase 1 flagellin Phase 1 flagellin 31
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 33
"Winged helix" DNA-binding domain GntR ligand-binding domain-like 31
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheW-like 33
GAF domain-like GAF domain-like 33
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 32
Nqo1 FMN-binding domain-like Nqo1C-terminal domain-like 31
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 31
Histidine-containing phosphotransfer domain, HPT domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 33
Nqo1C-terminal domain-like 4Fe-4S ferredoxins 31
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 32
Nqo1 FMN-binding domain-like Nqo1 middle domain-like 31
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 32
Nucleotide-binding domain Nucleotide-binding domain 33
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 32
Rubredoxin-like Ferritin-like 32
Thioredoxin-like 4Fe-4S ferredoxins 31
Translation proteins Ribosomal protein S5 domain 2-like 31
4Fe-4S ferredoxins alpha-helical ferredoxin 33
CheY-like HD-domain/PDEase-like 33
Histidine-containing phosphotransfer domain, HPT domain CheW-like 33
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 31
ParB/Sulfiredoxin S-adenosyl-L-methionine-dependent methyltransferases 31
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 31
HAD-like Calcium ATPase, transmembrane domain M 33
CheY-like CheY-like 33
Zinc beta-ribbon DNA primase core 33
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 31
Thioredoxin-like Nqo1 middle domain-like 31
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 32
ARM repeat ARM repeat 31
Homodimeric domain of signal transducing histidine kinase CheW-like 33
Nqo1 middle domain-like Nqo1C-terminal domain-like 31
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 33
PUA domain-like Ribosomal protein S5 domain 2-like 32
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 33
lambda repressor-like DNA-binding domains LexA/Signal peptidase 31
4Fe-4S ferredoxins FMN-dependent nitroreductase-like 21
Acyl-CoA N-acyltransferases (Nat) Acyl-CoA N-acyltransferases (Nat) 22
Lysozyme-like LysM domain 22
PLP-binding barrel Alanine racemase C-terminal domain-like 21
S-adenosyl-L-methionine-dependent methyltransferases S-adenosyl-L-methionine-dependent methyltransferases 22
PDZ domain-like ClpP/crotonase 22
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 22
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 22
CheY-like C-terminal effector domain of the bipartite response regulators 21
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 22
NAD(P)-binding Rossmann-fold domains UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 22
GroES-like NAD(P)-binding Rossmann-fold domains 21
Chemotaxis receptor methyltransferase CheR, N-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 21
Aminopeptidase/glucanase lid domain Zn-dependent exopeptidases 21
"Winged helix" DNA-binding domain LexA/Signal peptidase 21
4Fe-4S ferredoxins P-loop containing nucleoside triphosphate hydrolases 21
Periplasmic binding protein-like II Lysozyme-like 21
"Winged helix" DNA-binding domain Periplasmic binding protein-like II 21
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 21
NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains 22
PDZ domain-like PDZ domain-like 21
Putative DNA-binding domain Ribonuclease H-like 22
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 21
Periplasmic binding protein-like II PYP-like sensor domain (PAS domain) 22
Alpha-L RNA-binding motif Pseudouridine synthase 21
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 22
TPR-like Sporulation related repeat 21
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 21
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 21
TPR-like UDP-Glycosyltransferase/glycogen phosphorylase 22
GAF domain-like P-loop containing nucleoside triphosphate hydrolases 21
Prim-pol domain P-loop containing nucleoside triphosphate hydrolases 21
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 21
GAF domain-like HD-domain/PDEase-like 22
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 22
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 21
Sensory domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 22
PilZ domain-like PilZ domain-like 21
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 22
FAD/NAD(P)-binding domain Rhodanese/Cell cycle control phosphatase 21
Nucleic acid-binding proteins Translation proteins SH3-like domain 22
Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 21
GAF domain-like Homeodomain-like 21
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 21
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 22
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 22
Sensory domain-like Homodimeric domain of signal transducing histidine kinase 22
Metallo-hydrolase/oxidoreductase Flavoproteins 21
Thiamin diphosphate-binding fold (THDP-binding) 4Fe-4S ferredoxins 22
Trypsin-like serine proteases PDZ domain-like 21
ThrRS/AlaRS common domain Class II aaRS and biotin synthetases 22
Nucleic acid-binding proteins Nucleic acid-binding proteins 22
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 21
Respiratory nitrate reductase 1 gamma chain Respiratory nitrate reductase 1 gamma chain 21
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 22
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 21
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 21
6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 22
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 22
Radical SAM enzymes Nitrogenase accessory factor-like 21
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 21
GAF domain-like Nucleotide cyclase 22
Lysozyme-like beta-lactamase/transpeptidase-like 22
FAD/NAD-linked reductases, dimerisation (C-terminal) domain Rhodanese/Cell cycle control phosphatase 21
NAD(P)-binding Rossmann-fold domains Glutathione synthetase ATP-binding domain-like 22
6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 22
Nitrite/Sulfite reductase N-terminal domain-like 4Fe-4S ferredoxins 21
CheY-like Methylesterase CheB, C-terminal domain 21
"Winged helix" DNA-binding domain GAF domain-like 21
Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), C-terminal domain 22
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 22
P-loop containing nucleoside triphosphate hydrolases TrpR-like 21
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 22
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 22
Methionine synthase domain Cobalamin (vitamin B12)-binding domain 21
NagB/RpiA/CoA transferase-like Acyl-CoA N-acyltransferases (Nat) 21
P-loop containing nucleoside triphosphate hydrolases Restriction endonuclease-like 22
Respiratory nitrate reductase 1 gamma chain alpha-helical ferredoxin 21
tRNA-binding arm Class II aaRS and biotin synthetases 21
Thioesterase/thiol ester dehydrase-isomerase Thioesterase/thiol ester dehydrase-isomerase 22
Zinc beta-ribbon P-loop containing nucleoside triphosphate hydrolases 22
NAD(P)-binding Rossmann-fold domains SCP-like 22
Penicillin binding protein dimerisation domain beta-lactamase/transpeptidase-like 21
PreATP-grasp domain Rudiment single hybrid motif 22
HAMP domain-like PP2C-like 22
Sensory domain-like HAMP domain-like 22
Fic-like "Winged helix" DNA-binding domain 21
Chaperone J-domain HSP40/DnaJ peptide-binding domain 22
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 21
P-loop containing nucleoside triphosphate hydrolases vWA-like 21
Class II aaRS and biotin synthetases Radical SAM enzymes 11
P-loop containing nucleoside triphosphate hydrolases Cobalamin (vitamin B12)-dependent enzymes 11
Carbon-nitrogen hydrolase Carbon-nitrogen hydrolase 11
Translation proteins ThrRS/AlaRS common domain 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
4Fe-4S ferredoxins Adenine nucleotide alpha hydrolases-like 11
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 11
SGNH hydrolase Autotransporter 11
Methylated DNA-protein cysteine methyltransferase domain Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
EAL domain-like CBS-domain pair 11
Nucleic acid-binding proteins Anticodon-binding domain of PheRS 11
P-loop containing nucleoside triphosphate hydrolases Dehydroquinate synthase-like 11
PHP domain-like AF1531-like 11
RuvA domain 2-like DNA helicase RuvA subunit, C-terminal domain 11
Molybdenum cofactor biosynthesis proteins CinA-like 11
Periplasmic binding protein-like II CheW-like 11
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 11
NAD(P)-binding Rossmann-fold domains Bet v1-like 11
RuvA domain 2-like MCP/YpsA-like 11
HAMP domain-like Nucleotide cyclase 11
HMA, heavy metal-associated domain HMA, heavy metal-associated domain 11
EAL domain-like Sensory domain-like 11
S13-like H2TH domain Glucocorticoid receptor-like (DNA-binding domain) 11
PK beta-barrel domain-like PK C-terminal domain-like 11
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 11
Rubredoxin-like Rubredoxin-like 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
FliG FliG 11
ADC synthase D-aminoacid aminotransferase-like PLP-dependent enzymes 11
ClpP/crotonase NfeD domain-like 11
Nucleic acid-binding proteins GAD domain-like 11
Tex N-terminal region-like RuvA domain 2-like 11
HD-domain/PDEase-like Nucleotidyltransferase 11
"Winged helix" DNA-binding domain C-terminal domain of transcriptional repressors 11
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 11
HAMP domain-like CheY-like 11
Cobalamin (vitamin B12)-binding domain Cobalamin (vitamin B12)-dependent enzymes 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
Ribonuclease H-like Nucleic acid-binding proteins 11
PH0987 N-terminal domain-like Metallo-hydrolase/oxidoreductase 11
AraD/HMP-PK domain-like RmlC-like cupins 11
"Winged helix" DNA-binding domain Chorismate lyase-like 11
Nudix Nudix 11
Acylphosphatase/BLUF domain-like YrdC/RibB 11
Sensory domain-like GAF domain-like 11
NAD(P)-binding Rossmann-fold domains ACT-like 11
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 11
Thioesterase/thiol ester dehydrase-isomerase NAD(P)-binding Rossmann-fold domains 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphoenolpyruvate/pyruvate domain 11
Chorismate mutase II Periplasmic binding protein-like II 11
PYP-like sensor domain (PAS domain) Histidine-containing phosphotransfer domain, HPT domain 11
YbaK/ProRS associated domain Class II aaRS ABD-related 11
CBS-domain pair Poly A polymerase C-terminal region-like 11
alpha-helical ferredoxin FAD/NAD(P)-binding domain 11
Nucleic acid-binding proteins DNA helicase RuvA subunit, C-terminal domain 11
Translation proteins Initiation factor IF2/eIF5b, domain 3 11
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 11
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Adenine nucleotide alpha hydrolases-like 11
CheY-like Periplasmic binding protein-like II 11
Voltage-gated potassium channels NAD(P)-binding Rossmann-fold domains 11
FMN-linked oxidoreductases FAD/NAD(P)-binding domain 11
Eukaryotic type KH-domain (KH-domain type I) Nucleic acid-binding proteins 11
Adenine nucleotide alpha hydrolases-like PheT/TilS domain 11
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 11
Nucleotidylyl transferase tRNA-binding arm 11
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 11
Thiolase-like NAD(P)-binding Rossmann-fold domains 11
Clc chloride channel CBS-domain pair 11
4Fe-4S ferredoxins DHS-like NAD/FAD-binding domain 11
YhbC-like, N-terminal domain YhbC-like, C-terminal domain 11
HD-domain/PDEase-like Homodimeric domain of signal transducing histidine kinase 11
PIN domain-like DNA/RNA polymerases 11
TrkA C-terminal domain-like TrkA C-terminal domain-like 11
(Trans)glycosidases Glycosyl hydrolase domain 11
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 11
UDP-Glycosyltransferase/glycogen phosphorylase Nucleotide-diphospho-sugar transferases 11
Class II aaRS and biotin synthetases SufE/NifU 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
RuvA domain 2-like P-loop containing nucleoside triphosphate hydrolases 11
MesJ substrate recognition domain-like PheT/TilS domain 11
Ribonuclease H-like RuvA domain 2-like 11
HMA, heavy metal-associated domain HAD-like 11
PH0987 N-terminal domain-like Cyclophilin-like 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
Thiolase-like SCP-like 11
HD-domain/PDEase-like HD-domain/PDEase-like 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain ACT-like 11
Aconitase iron-sulfur domain LeuD/IlvD-like 11
Ligand-binding domain in the NO signalling and Golgi transport P-loop containing nucleoside triphosphate hydrolases 11
cAMP-binding domain-like "Winged helix" DNA-binding domain 11
HD-domain/PDEase-like ACT-like 11
Cyclophilin-like Metallo-hydrolase/oxidoreductase 11
RBP11-like subunits of RNA polymerase C-terminal domain of RNA polymerase alpha subunit 11
S-adenosyl-L-methionine-dependent methyltransferases Acyl-CoA N-acyltransferases (Nat) 11
4Fe-4S ferredoxins 4Fe-4S ferredoxins 11
DnaK suppressor protein DksA, alpha-hairpin domain Glucocorticoid receptor-like (DNA-binding domain) 11
Periplasmic binding protein-like II Cytidine deaminase-like 11
PheT/TilS domain Anticodon-binding domain of PheRS 11
GIY-YIG endonuclease RuvA domain 2-like 11
Zinc beta-ribbon Zinc beta-ribbon 11
Thioredoxin-like Six-hairpin glycosidases 11
TK C-terminal domain-like 4Fe-4S ferredoxins 11
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 11
TGS-like ACT-like 11
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 11
Folate-binding domain P-loop containing nucleoside triphosphate hydrolases 11
Periplasmic binding protein-like I Periplasmic binding protein-like I 11
Periplasmic binding protein-like II EAL domain-like 11
Ribonuclease PH domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 11
CBS-domain pair MgtE membrane domain-like 11
ALDH-like Dehydroquinate synthase-like 11
Thioesterase/thiol ester dehydrase-isomerase SCP-like 11
Enolase N-terminal domain-like Enolase C-terminal domain-like 11
Glutamine synthetase/guanido kinase GatB/YqeY motif 11
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 11
EspE N-terminal domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 11
Multiheme cytochromes Respiratory nitrate reductase 1 gamma chain 11
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 11
Nucleotide cyclase Nucleotide cyclase 11
Nucleotidylyl transferase Ribosomal protein L25-like 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 11
Nucleotidylyl transferase Riboflavin kinase-like 11
Ligand-binding domain in the NO signalling and Golgi transport Homeodomain-like 11
PYP-like sensor domain (PAS domain) PP2C-like 11
Flagellar hook protein flgE Flagellar hook protein flgE 11
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 11
Chemotaxis phosphatase CheZ Chemotaxis phosphatase CheZ 11
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 11
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 11
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 11
FKBP-like TPR-like 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
PIN domain-like P-loop containing nucleoside triphosphate hydrolases 11
Pyruvate-ferredoxin oxidoreductase, PFOR, domain III Thiamin diphosphate-binding fold (THDP-binding) 11
GroEL equatorial domain-like GroEL-intermediate domain like 11
Cytidine deaminase-like Dihydrofolate reductase-like 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
Nucleic acid-binding proteins BRCT domain 11
Transcription factor NusA, N-terminal domain Nucleic acid-binding proteins 11
DNA methylase specificity domain DNA methylase specificity domain 11
P-loop containing nucleoside triphosphate hydrolases C-terminal UvrC-binding domain of UvrB 11
Epsilon subunit of F1F0-ATP synthase N-terminal domain Epsilon subunit of F1F0-ATP synthase C-terminal domain 11
Periplasmic binding protein-like II GlnB-like 11
Nucleic acid-binding proteins SCP-like 11
"Winged helix" DNA-binding domain Class II aaRS and biotin synthetases 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
"Winged helix" DNA-binding domain NAD(P)-binding Rossmann-fold domains 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
PYP-like sensor domain (PAS domain) C-terminal effector domain of the bipartite response regulators 11
Nqo1 FMN-binding domain-like alpha-helical ferredoxin 11
TrmE connector domain P-loop containing nucleoside triphosphate hydrolases 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain Trimeric LpxA-like enzymes 11
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
Protein kinase-like (PK-like) TPR-like 11
PreATP-grasp domain Methylglyoxal synthase-like 11
N-terminal domain of DnaB helicase P-loop containing nucleoside triphosphate hydrolases 11
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 11
P-loop containing nucleoside triphosphate hydrolases lambda repressor-like DNA-binding domains 11
Chorismate mutase II ACT-like 11
DHH phosphoesterases Nucleotidyltransferase 11
Putative DNA-binding domain Anticodon-binding domain of PheRS 11
all-alpha NTP pyrophosphatases all-alpha NTP pyrophosphatases 11
Translation proteins PRC-barrel domain 11
Ribosomal protein L6 Ribosomal protein L6 11
CheY-like PP2C-like 11
PreATP-grasp domain PreATP-grasp domain 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11
Nucleotide-diphospho-sugar transferases Guanosine diphospho-D-mannose pyrophosphorylase/mannose-6-phosphate isomerase linker domain 11
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 11
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 11
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 11
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 11
Ribonuclease H-like DNA/RNA polymerases 11
P-loop containing nucleoside triphosphate hydrolases CarD-like 11
ACT-like 4Fe-4S ferredoxins 11
"Winged helix" DNA-binding domain Iron-dependent repressor protein, dimerization domain 11
RuvA domain 2-like JAB1/MPN domain 11
Trigger factor ribosome-binding domain FKBP-like 11
EPT/RTPC-like RNA 3'-terminal phosphate cyclase, RPTC, insert domain 11
Nucleotide cyclase TPR-like 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 11
GAF domain-like Histidine-containing phosphotransfer domain, HPT domain 11
Rho N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
NAD(P)-binding Rossmann-fold domains Isocitrate/Isopropylmalate dehydrogenase-like 11
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 11
RuvA domain 2-like BRCT domain 11
Galactose-binding domain-like Galactose-binding domain-like 11
Glycerol-3-phosphate (1)-acyltransferase NAD(P)-binding Rossmann-fold domains 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
CO dehydrogenase molybdoprotein N-domain-like Molybdenum cofactor-binding domain 11
DNA clamp DNA clamp 11
5' to 3' exonuclease, C-terminal subdomain Ribonuclease H-like 11
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 11
CBS-domain pair Nucleotide cyclase 11
Carbamate kinase-like ACT-like 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Nucleic acid-binding proteins 11
Nucleic acid-binding proteins Putative DNA-binding domain 11
Globin-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
F1F0 ATP synthase subunit C F1F0 ATP synthase subunit C 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Nucleic acid-binding proteins 11
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 11
Glycoside hydrolase/deacetylase Families 57/38 glycoside transferase middle domain 11
PHP domain-like P-loop containing nucleoside triphosphate hydrolases 11
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 11
Cobalamin (vitamin B12)-binding domain Radical SAM enzymes 11
Glucocorticoid receptor-like (DNA-binding domain) P-loop containing nucleoside triphosphate hydrolases 11
Sm-like ribonucleoproteins cAMP-binding domain-like 11
Adenine nucleotide alpha hydrolases-like MesJ substrate recognition domain-like 11
HD-domain/PDEase-like P-loop containing nucleoside triphosphate hydrolases 11
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 11
EspE N-terminal domain-like Homodimeric domain of signal transducing histidine kinase 11
Cobalamin (vitamin B12)-binding domain P-loop containing nucleoside triphosphate hydrolases 11
Glutamyl tRNA-reductase catalytic, N-terminal domain NAD(P)-binding Rossmann-fold domains 11
FAD-binding/transporter-associated domain-like Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain 11
Bacterial fluorinating enzyme, N-terminal domain Bacterial fluorinating enzyme, C-terminal domain 11
Prokaryotic type KH domain (KH-domain type II) Rad51 N-terminal domain-like 11
N-terminal domain of MutM-like DNA repair proteins Glucocorticoid receptor-like (DNA-binding domain) 11
5' to 3' exonuclease, C-terminal subdomain DNA/RNA polymerases 11
Homo-oligomeric flavin-containing Cys decarboxylases, HFCD CoaB-like 11
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 11
Cna protein B-type domain Metalloproteases ("zincins"), catalytic domain 11
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 11
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex CoA-dependent acyltransferases 11
PhoU-like Protein kinase-like (PK-like) 11
Glycoside hydrolase/deacetylase Galactose mutarotase-like 11
Families 57/38 glycoside transferase middle domain Galactose mutarotase-like 11
EreA/ChaN-like PDZ domain-like 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
CheY-like CBS-domain pair 11
Folate-binding domain TrmE connector domain 11
TPR-like HCP-like 11
GIY-YIG endonuclease C-terminal UvrC-binding domain of UvrB 11
Nucleotidylyl transferase Nucleic acid-binding proteins 11
DNA primase core P-loop containing nucleoside triphosphate hydrolases 11
Carbamate kinase-like PUA domain-like 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
Glutathione synthetase ATP-binding domain-like Phosphoenolpyruvate/pyruvate domain 11
Carboxypeptidase regulatory domain-like Cna protein B-type domain 11
Alpha-L RNA-binding motif S-adenosyl-L-methionine-dependent methyltransferases 11
Tetrapyrrole methylase S-adenosyl-L-methionine-dependent methyltransferases 11
HD-domain/PDEase-like TGS-like 11
Tryptophan synthase beta subunit-like PLP-dependent enzymes Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
Prokaryotic type KH domain (KH-domain type II) Prokaryotic type KH domain (KH-domain type II) 11
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Alpha subunit of glutamate synthase, C-terminal domain 11
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 11
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 11
Sensory domain-like CheY-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 11
SirA-like DsrEFH-like 11
4Fe-4S ferredoxins HprK N-terminal domain-like 11
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 11
Nucleotidyltransferase ACT-like 11
Metallo-hydrolase/oxidoreductase SCP-like 11
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 11
Glutathione synthetase ATP-binding domain-like N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) 11
PreATP-grasp domain N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) 11
Pyruvate-ferredoxin oxidoreductase, PFOR, domain III TK C-terminal domain-like 11
Nucleic acid-binding proteins ArfGap/RecO-like zinc finger 11
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 11
Sensory domain-like PYP-like sensor domain (PAS domain) 11
RuvA domain 2-like RuvA domain 2-like 11
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 11
Class II aaRS and biotin synthetases YbaK/ProRS associated domain 11
Rubredoxin-like Superoxide reductase-like 11
PIN domain-like Ribonuclease H-like 11
P-loop containing nucleoside triphosphate hydrolases HprK N-terminal domain-like 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
"Winged helix" DNA-binding domain Putative transcriptional regulator TM1602, C-terminal domain 11
Nqo1C-terminal domain-like alpha-helical ferredoxin 11
2Fe-2S ferredoxin-like Actin-like ATPase domain 11
Class I glutamine amidotransferase-like LD-carboxypeptidase A C-terminal domain-like 11
L,D-transpeptidase catalytic domain-like NTF2-like 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 11
Enolase C-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
Nucleic acid-binding proteins S-adenosyl-L-methionine-dependent methyltransferases 11
CheY-like CheW-like 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
Fe-S cluster assembly (FSCA) domain-like P-loop containing nucleoside triphosphate hydrolases 11
RNase III domain-like dsRNA-binding domain-like 11
Aminoacid dehydrogenase-like, N-terminal domain Isocitrate/Isopropylmalate dehydrogenase-like 11
Aldolase AFP III-like domain 11
Eukaryotic type KH-domain (KH-domain type I) HD-domain/PDEase-like 11
UDP-Glycosyltransferase/glycogen phosphorylase UDP-Glycosyltransferase/glycogen phosphorylase 11
FMN-binding split barrel UbiD C-terminal domain-like 11
Transcription factor NusA, N-terminal domain Prokaryotic type KH domain (KH-domain type II) 11
Single hybrid motif CoA-dependent acyltransferases 11
Single hybrid motif Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 11
P-loop containing nucleoside triphosphate hydrolases Ribonuclease H-like 11
EspE N-terminal domain-like CheW-like 11
cAMP-binding domain-like CBS-domain pair 11
Diaminopimelate epimerase-like Diaminopimelate epimerase-like 11
Carboxypeptidase regulatory domain-like Metalloproteases ("zincins"), catalytic domain 11
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain "Winged helix" DNA-binding domain 11
ParB/Sulfiredoxin KorB DNA-binding domain-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 11
Class II aaRS and biotin synthetases Translation proteins 11
Voltage-gated potassium channels TrkA C-terminal domain-like 11
Leukotriene A4 hydrolase N-terminal domain Metalloproteases ("zincins"), catalytic domain 11
CarD-like TRCF domain-like 11
Multiheme cytochromes Multiheme cytochromes 11
Rho N-terminal domain-like Nucleic acid-binding proteins 11
P-loop containing nucleoside triphosphate hydrolases Isocitrate/Isopropylmalate dehydrogenase-like 11
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 11
Nqo1C-terminal domain-like Nucleotide-binding domain 11
Aldolase post-HMGL domain-like 11
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FMN-linked oxidoreductases 11
HprK N-terminal domain-like Isocitrate/Isopropylmalate dehydrogenase-like 11
Nucleic acid-binding proteins Rad51 N-terminal domain-like 11
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 11
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 11
Periplasmic binding protein-like II Nucleotide cyclase 11
Periplasmic binding protein-like II Homodimeric domain of signal transducing histidine kinase 11
Nucleic acid-binding proteins Prokaryotic type KH domain (KH-domain type II) 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
4Fe-4S ferredoxins Fe-only hydrogenase 11
FMN-linked oxidoreductases Alpha subunit of glutamate synthase, C-terminal domain 11
Nucleic acid-binding proteins NAD(P)-binding Rossmann-fold domains 11
Carboxypeptidase regulatory domain-like Carboxypeptidase regulatory domain-like 11
CBS-domain pair Nucleotidyltransferase 11
Histidine-containing phosphotransfer domain, HPT domain EspE N-terminal domain-like 11
DNA ligase/mRNA capping enzyme, catalytic domain RuvA domain 2-like 11
Periplasmic binding protein-like II ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
PheT/TilS domain Class II aaRS and biotin synthetases 11
DHH phosphoesterases CBS-domain pair 11
CheC-like Surface presentation of antigens (SPOA) 11
Barwin-like endoglucanases Sporulation related repeat 11
YrdC/RibB RibA-like 11
L30e-like alpha/beta knot 11
Radical SAM enzymes "Helical backbone" metal receptor 11
FMN-dependent nitroreductase-like FMN-dependent nitroreductase-like 11
Riboflavin synthase domain-like Riboflavin synthase domain-like 11
L9 N-domain-like Ribosomal protein L9 C-domain 11
P-loop containing nucleoside triphosphate hydrolases SMR domain-like 11
LysM domain LysM domain 11
PUA domain-like Nucleotidylyl transferase 11
PheT/TilS domain Putative DNA-binding domain 11
Prokaryotic type I DNA topoisomerase Zinc beta-ribbon 11
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
Sensory domain-like Sensory domain-like 11
Formyltransferase FMT C-terminal domain-like 11
Tex N-terminal region-like Ribonuclease H-like 11
DHH phosphoesterases Poly A polymerase C-terminal region-like 11
EspE N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
Nucleotidyltransferase TGS-like 11
Ribosomal protein S5 domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
P-loop containing nucleoside triphosphate hydrolases Smc hinge domain 11
P-loop containing nucleoside triphosphate hydrolases RmlC-like cupins 11
CheY-like Nucleotide cyclase 11
CBS-domain pair FAD-binding/transporter-associated domain-like 11
Rudiment single hybrid motif N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) 11
S-adenosyl-L-methionine-dependent methyltransferases DNA methylase specificity domain 11
Sensory domain-like PP2C-like 11
UDP-Glycosyltransferase/glycogen phosphorylase S-adenosyl-L-methionine-dependent methyltransferases 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
NAD(P)-binding Rossmann-fold domains Trimeric LpxA-like enzymes 11
YjeF N-terminal domain-like Ribokinase-like 11
R1 subunit of ribonucleotide reductase, N-terminal domain PFL-like glycyl radical enzymes 11
Thiolase-like Nucleic acid-binding proteins 11
Tryptophan synthase beta subunit-like PLP-dependent enzymes Nucleotidylyl transferase 11
Translation proteins "Winged helix" DNA-binding domain 11
2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain Alkaline phosphatase-like 11
Nucleotide-diphospho-sugar transferases IpsF-like 11
NAD(P)-binding Rossmann-fold domains Glutamyl tRNA-reductase dimerization domain 11
GroEL-intermediate domain like GroEL apical domain-like 11
MgtE N-terminal domain-like CBS-domain pair 11
P-loop containing nucleoside triphosphate hydrolases TGS-like 11
Tetrapyrrole methylase HemD-like 11
PUA domain-like alpha/beta knot 11
Tetrapyrrole methylase Tetrapyrrole methylase 11
NAD(P)-binding Rossmann-fold domains Siroheme synthase middle domains-like 11
Nucleic acid-binding proteins PheT/TilS domain 11
CbiG N-terminal domain-like CobE/GbiG C-terminal domain-like 11
MgtE N-terminal domain-like MgtE membrane domain-like 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
MetI-like P-loop containing nucleoside triphosphate hydrolases 11
Class II aaRS and biotin synthetases GAD domain-like 11
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Eukaryotic type KH-domain (KH-domain type I) 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Trimeric LpxA-like enzymes RmlC-like cupins 11
Periplasmic binding protein-like II ACT-like 11
"Winged helix" DNA-binding domain Dimeric alpha+beta barrel 11
Translation proteins Translation proteins 11
Tetrapyrrole methylase HPr-like 11
Transcription factor NusA, N-terminal domain Rad51 N-terminal domain-like 11
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 11
Fe-only hydrogenase HprK N-terminal domain-like 11
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 11
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 11
Cryptochrome/photolyase, N-terminal domain Cryptochrome/photolyase FAD-binding domain 11
Tex N-terminal region-like Nucleic acid-binding proteins 11
HD-domain/PDEase-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Carbon-nitrogen hydrolase Adenine nucleotide alpha hydrolases-like 11
C-terminal UvrC-binding domain of UvrB RuvA domain 2-like 11
CheY-like Histidine-containing phosphotransfer domain, HPT domain 11
DNA repair protein MutS, domain III SMR domain-like 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphohistidine domain 11
2Fe-2S ferredoxin-like alpha-helical ferredoxin 11
GroEL equatorial domain-like GroEL apical domain-like 11
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
SufE/NifU Fe-S cluster assembly (FSCA) domain-like 11
FAD-binding/transporter-associated domain-like CO dehydrogenase flavoprotein C-terminal domain-like 11
GreA transcript cleavage protein, N-terminal domain FKBP-like 11
Glutamyl tRNA-reductase catalytic, N-terminal domain Glutamyl tRNA-reductase dimerization domain 11
Mechanosensitive channel protein MscS (YggB), C-terminal domain cAMP-binding domain-like 11
Globin-like Homodimeric domain of signal transducing histidine kinase 11

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