SUPERFAMILY 1.75 HMM library and genome assignments server

Domain combination pairs in Bacillus halodurans C-125

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

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Adjacent domain pairs graph

Graph of adjacent domain pairs.


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Domain combination pairs

704 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 2511
Homeodomain-like Homeodomain-like 238
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 239
CheY-like C-terminal effector domain of the bipartite response regulators 212
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 194
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 194
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 174
Actin-like ATPase domain Actin-like ATPase domain 176
Composite domain of metallo-dependent hydrolases Metallo-dependent hydrolases 144
lambda repressor-like DNA-binding domains Periplasmic binding protein-like I 141
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 132
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 111
(Trans)glycosidases Glycosyl hydrolase domain 115
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 107
Homeodomain-like Tetracyclin repressor-like, C-terminal domain 102
HAMP domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 105
GroES-like NAD(P)-binding Rossmann-fold domains 101
CheY-like Homeodomain-like 93
Thiolase-like Thiolase-like 92
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 97
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 91
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 85
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 83
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 72
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 76
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 75
"Winged helix" DNA-binding domain Periplasmic binding protein-like II 71
Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase C-terminal domain-like 62
PTS-regulatory domain, PRD PTS-regulatory domain, PRD 63
"Winged helix" DNA-binding domain NagB/RpiA/CoA transferase-like 61
"Winged helix" DNA-binding domain Dimeric alpha+beta barrel 61
Single hybrid motif CoA-dependent acyltransferases 62
"Winged helix" DNA-binding domain Chorismate lyase-like 61
Single hybrid motif Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 62
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 62
PGBD-like PGBD-like 66
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex CoA-dependent acyltransferases 62
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 53
P-loop containing nucleoside triphosphate hydrolases Translation proteins 54
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 51
PYP-like sensor domain (PAS domain) Homeodomain-like 54
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 52
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 51
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 53
PYP-like sensor domain (PAS domain) P-loop containing nucleoside triphosphate hydrolases 54
Sensory domain-like Methyl-accepting chemotaxis protein (MCP) signaling domain 53
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 52
HAMP domain-like Homodimeric domain of signal transducing histidine kinase 53
Penicillin binding protein dimerisation domain beta-lactamase/transpeptidase-like 54
PreATP-grasp domain Rudiment single hybrid motif 52
MalF N-terminal region-like MetI-like 42
Galactose mutarotase-like (Trans)glycosidases 44
ACT-like ACT-like 42
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 43
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein S5 domain 2-like 44
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 41
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 42
Homeodomain-like SIS domain 41
HAD-like Calcium ATPase, transmembrane domain M 44
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 44
Lysozyme-like beta-lactamase/transpeptidase-like 44
P-loop containing nucleoside triphosphate hydrolases MOP-like 41
Sensory domain-like PYP-like sensor domain (PAS domain) 43
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 43
Sensory domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 43
Homeodomain-like Probable bacterial effector-binding domain 41
Calcium ATPase, transduction domain A HAD-like 44
Homeodomain-like Ribonuclease H-like 42
"Winged helix" DNA-binding domain GAF domain-like 41
"Winged helix" DNA-binding domain PLP-dependent transferases 41
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 41
NAD(P)-binding Rossmann-fold domains ACT-like 33
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 32
Phospholipase D/nuclease Phospholipase D/nuclease 33
Zn-dependent exopeptidases Sporulation related repeat 31
PTS system IIB component-like Phoshotransferase/anion transport protein 32
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 31
Formate dehydrogenase/DMSO reductase, domains 1-3 ADC-like 31
"Winged helix" DNA-binding domain GntR ligand-binding domain-like 31
NAD(P)-binding Rossmann-fold domains TrkA C-terminal domain-like 31
Arabinanase/levansucrase/invertase Concanavalin A-like lectins/glucanases 32
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 31
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 33
Nucleic acid-binding proteins Nucleic acid-binding proteins 33
LysM domain LysM domain 33
PurM N-terminal domain-like PurM C-terminal domain-like 32
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 32
PLP-binding barrel Alanine racemase C-terminal domain-like 32
Nucleic acid-binding proteins RuvA domain 2-like 33
Glycoside hydrolase/deacetylase Families 57/38 glycoside transferase middle domain 33
Galactose mutarotase-like Glycosyl hydrolase domain 33
CBS-domain pair MgtE membrane domain-like 32
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 33
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 33
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 33
RmlC-like cupins Homeodomain-like 31
PTS-regulatory domain, PRD Phoshotransferase/anion transport protein 32
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 31
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 31
Carbamate kinase-like ACT-like 31
SacY-like RNA-binding domain PTS-regulatory domain, PRD 31
Alpha-L RNA-binding motif Pseudouridine synthase 31
Metallo-dependent phosphatases 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain 33
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 33
HAMP domain-like PYP-like sensor domain (PAS domain) 32
Translation proteins EF-G C-terminal domain-like 32
"Winged helix" DNA-binding domain Actin-like ATPase domain 31
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 32
EF-G C-terminal domain-like EF-G C-terminal domain-like 32
PGBD-like Zn-dependent exopeptidases 33
Regulatory protein AraC Homeodomain-like 31
Class II aaRS and biotin synthetases Class II aaRS ABD-related 33
Glutathione synthetase ATP-binding domain-like Acylphosphatase/BLUF domain-like 31
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 32
Glucose permease domain IIB Duplicated hybrid motif 32
Cobalamin (vitamin B12)-dependent enzymes Cobalamin (vitamin B12)-binding domain 32
(Trans)glycosidases E set domains 33
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 22
Nucleotide-diphospho-sugar transferases UDP-Glycosyltransferase/glycogen phosphorylase 21
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 22
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 21
beta-lactamase/transpeptidase-like Penicillin-binding protein associated domain 22
MgtE N-terminal domain-like CBS-domain pair 21
TPR-like TPR-like 22
PYP-like sensor domain (PAS domain) Sporulation response regulatory protein Spo0B 21
PLP-dependent transferases Ornithine decarboxylase C-terminal domain 21
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 21
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 22
PTS-regulatory domain, PRD PTS system IIB component-like 21
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheY-like 21
PUA domain-like Nucleotidylyl transferase 21
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 21
CO dehydrogenase molybdoprotein N-domain-like Molybdenum cofactor-binding domain 22
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
Cna protein B-type domain Cna protein B-type domain 22
PreATP-grasp domain PreATP-grasp domain 22
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 22
Serine metabolism enzymes domain ACT-like 22
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 22
Sigma3 and sigma4 domains of RNA polymerase sigma factors NTF2-like 21
Galactose-binding domain-like SGNH hydrolase 22
"Winged helix" DNA-binding domain PTS system IIB component-like 21
Aminopeptidase/glucanase lid domain Zn-dependent exopeptidases 21
P-loop containing nucleoside triphosphate hydrolases Restriction endonuclease-like 22
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 22
"Winged helix" DNA-binding domain PTS-regulatory domain, PRD 21
Sm-like ribonucleoproteins Mechanosensitive channel protein MscS (YggB), C-terminal domain 22
Sensory domain-like Sporulation response regulatory protein Spo0B 21
Homodimeric domain of signal transducing histidine kinase CheY-like 21
Enolase N-terminal domain-like Enolase C-terminal domain-like 21
"Winged helix" DNA-binding domain Phoshotransferase/anion transport protein 21
Penicillin binding protein dimerisation domain Penicillin-binding protein 2x (pbp-2x), c-terminal domain 22
Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), C-terminal domain 22
PA domain Subtilisin-like 21
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 22
CheW-like CheY-like 21
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 22
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 22
MgtE N-terminal domain-like MgtE membrane domain-like 21
MurCD N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 21
CheY-like P-loop containing nucleoside triphosphate hydrolases 21
GAF domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 22
Nucleotidyltransferase Poly A polymerase C-terminal region-like 21
Nucleic acid-binding proteins Ribonuclease H-like 22
tRNA-binding arm Class II aaRS and biotin synthetases 21
"Winged helix" DNA-binding domain CBS-domain pair 22
Nucleic acid-binding proteins S-adenosyl-L-methionine-dependent methyltransferases 21
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 21
Cytochrome c oxidase subunit II-like, transmembrane region Cupredoxins 22
ClpP/crotonase ClpP/crotonase 21
CheY-like "Winged helix" DNA-binding domain 21
Methylated DNA-protein cysteine methyltransferase domain Methylated DNA-protein cysteine methyltransferase, C-terminal domain 21
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 22
FAD-binding/transporter-associated domain-like CO dehydrogenase flavoprotein C-terminal domain-like 22
Glycoside hydrolase/deacetylase Galactose mutarotase-like 22
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 22
(Trans)glycosidases Galactose-binding domain-like 22
FKBP-like Triger factor/SurA peptide-binding domain-like 22
beta-lactamase/transpeptidase-like Penicillin-binding protein 2x (pbp-2x), c-terminal domain 22
2Fe-2S ferredoxin-like CO dehydrogenase ISP C-domain like 21
CheC-like Surface presentation of antigens (SPOA) 22
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 21
beta-lactamase/transpeptidase-like Fibronectin type III 22
PDZ domain-like Trypsin-like serine proteases 22
Bacterial adhesins Cna protein B-type domain 22
Protease propeptides/inhibitors Subtilisin-like 21
Sigma2 domain of RNA polymerase sigma factors NTF2-like 21
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 22
(Trans)glycosidases Class I glutamine amidotransferase-like 21
HMA, heavy metal-associated domain HAD-like 22
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 22
EF-G C-terminal domain-like Ribosomal protein S5 domain 2-like 22
Phosphoenolpyruvate/pyruvate domain Phosphohistidine domain 22
Families 57/38 glycoside transferase middle domain Galactose mutarotase-like 22
Bacterial adhesins Bacterial adhesins 22
Galactose-binding domain-like Fibronectin type III 22
Glucocorticoid receptor-like (DNA-binding domain) P-loop containing nucleoside triphosphate hydrolases 22
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 21
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 22
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 22
Nucleic acid-binding proteins Translation proteins SH3-like domain 22
ThrRS/AlaRS common domain Class II aaRS and biotin synthetases 22
L30e-like alpha/beta knot 21
MurCD N-terminal domain MurD-like peptide ligases, catalytic domain 21
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 21
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 21
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 22
Translation proteins ThrRS/AlaRS common domain 22
(Trans)glycosidases Beta-D-glucan exohydrolase, C-terminal domain 22
CheY-like Nucleotide cyclase 22
PYP-like sensor domain (PAS domain) PYP-like sensor domain (PAS domain) 22
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 21
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 21
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 21
P-loop containing nucleoside triphosphate hydrolases Hypothetical protein YjiA, C-terminal domain 21
Sporulation response regulatory protein Spo0B ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 21
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 21
Lysozyme-like Fibronectin type III 22
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 21
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 21
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 21
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 22
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 21
MesJ substrate recognition domain-like PheT/TilS domain 11
Voltage-gated potassium channels NAD(P)-binding Rossmann-fold domains 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
Nucleic acid-binding proteins PheT/TilS domain 11
NAD(P)-binding Rossmann-fold domains UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 11
RNase III domain-like dsRNA-binding domain-like 11
Molybdenum cofactor-binding domain CO dehydrogenase flavoprotein C-terminal domain-like 11
PIN domain-like Ribonuclease H-like 11
MoeA N-terminal region -like MoeA C-terminal domain-like 11
Tetrapyrrole methylase HemD-like 11
Sensory domain-like HAMP domain-like 11
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 11
Metal cation-transporting ATPase, ATP-binding domain N Calcium ATPase, transmembrane domain M 11
Cytidine deaminase-like Dihydrofolate reductase-like 11
KaiA/RbsU domain PP2C-like 11
Tetrapyrrole methylase all-alpha NTP pyrophosphatases 11
Periplasmic binding protein-like II ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
(Trans)glycosidases Cyclophilin-like 11
P-loop containing nucleoside triphosphate hydrolases Smc hinge domain 11
Trigger factor ribosome-binding domain FKBP-like 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
Methionine synthase domain Methionine synthase activation domain-like 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
PH0987 N-terminal domain-like Cyclophilin-like 11
Histidine-containing phosphotransfer domain, HPT domain CheW-like 11
PPK N-terminal domain-like Phospholipase D/nuclease 11
DNA primase core N-terminal domain of DnaB helicase 11
Globin-like Riboflavin synthase domain-like 11
Glutathione synthetase ATP-binding domain-like Succinyl-CoA synthetase domains 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
GIY-YIG endonuclease RuvA domain 2-like 11
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 11
PK beta-barrel domain-like PK C-terminal domain-like 11
RBP11-like subunits of RNA polymerase C-terminal domain of RNA polymerase alpha subunit 11
Formate/glycerate dehydrogenase catalytic domain-like ACT-like 11
"Winged helix" DNA-binding domain HprK N-terminal domain-like 11
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 11
Ribosomal protein L6 Ribosomal protein L6 11
HD-domain/PDEase-like TGS-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 11
Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 11
"Winged helix" DNA-binding domain Class II aaRS and biotin synthetases 11
CO dehydrogenase molybdoprotein N-domain-like FAD-binding/transporter-associated domain-like 11
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 11
Cupredoxins Cytochrome c 11
Nucleotidylyl transferase Nucleic acid-binding proteins 11
alpha-helical ferredoxin Nucleotide-binding domain 11
MetI-like MetI-like 11
L9 N-domain-like Ribonuclease H-like 11
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 11
CheY-like Methylesterase CheB, C-terminal domain 11
FAD/NAD(P)-binding domain HI0933 insert domain-like 11
Bacillus cereus metalloprotein-like Bacillus cereus metalloprotein-like 11
Glutamyl tRNA-reductase catalytic, N-terminal domain NAD(P)-binding Rossmann-fold domains 11
YojJ-like RuvA domain 2-like 11
CheY-like TPR-like 11
"Winged helix" DNA-binding domain LexA/Signal peptidase 11
Eukaryotic type KH-domain (KH-domain type I) Nucleic acid-binding proteins 11
C-terminal UvrC-binding domain of UvrB RuvA domain 2-like 11
TrkA C-terminal domain-like TrkA C-terminal domain-like 11
NAD(P)-binding Rossmann-fold domains Serine metabolism enzymes domain 11
TGS-like Class II aaRS and biotin synthetases 11
C-terminal effector domain of the bipartite response regulators TPR-like 11
Translation proteins Ribosomal protein S5 domain 2-like 11
GreA transcript cleavage protein, N-terminal domain FKBP-like 11
"Winged helix" DNA-binding domain Iron-dependent repressor protein, dimerization domain 11
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 11
PEP carboxykinase N-terminal domain PEP carboxykinase-like 11
PreATP-grasp domain post-HMGL domain-like 11
CBS-domain pair Nucleotidyltransferase 11
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 11
Prokaryotic type I DNA topoisomerase Zinc beta-ribbon 11
4'-phosphopantetheinyl transferase 4'-phosphopantetheinyl transferase 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
2Fe-2S ferredoxin-like alpha-helical ferredoxin 11
cAMP-binding domain-like CBS-domain pair 11
Folate-binding domain Aminomethyltransferase beta-barrel domain 11
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 11
(Trans)glycosidases Fibronectin type III 11
Fibronectin type III Integrin alpha N-terminal domain 11
DNA clamp DNA clamp 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
CheY-binding domain of CheA CheW-like 11
Macro domain-like Zn-dependent exopeptidases 11
Cobalamin (vitamin B12)-binding domain Methionine synthase activation domain-like 11
Galactose-binding domain-like Integrin alpha N-terminal domain 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 11
YbaK/ProRS associated domain Class II aaRS ABD-related 11
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 11
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 11
Homocysteine S-methyltransferase FAD-linked oxidoreductase 11
FAD/NAD(P)-binding domain Nitrite and sulphite reductase 4Fe-4S domain-like 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
LysM domain PR-1-like 11
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB transmembrane domain 11
Rudiment single hybrid motif Single hybrid motif 11
NEAT domain-like NEAT domain-like 11
Dihydropteroate synthetase-like Methionine synthase domain 11
GAF domain-like P-loop containing nucleoside triphosphate hydrolases 11
SMAD/FHA domain P-loop containing nucleoside triphosphate hydrolases 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
Nucleotidyltransferase TGS-like 11
Riboflavin synthase domain-like Riboflavin synthase domain-like 11
Eukaryotic type KH-domain (KH-domain type I) HD-domain/PDEase-like 11
Aldolase post-HMGL domain-like 11
6-phosphogluconate dehydrogenase C-terminal domain-like ClpP/crotonase 11
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 11
Methylglyoxal synthase-like Cytidine deaminase-like 11
Chitinase insertion domain Fibronectin type III 11
MoeA N-terminal region -like Molybdenum cofactor biosynthesis proteins 11
Epsilon subunit of F1F0-ATP synthase N-terminal domain Epsilon subunit of F1F0-ATP synthase C-terminal domain 11
"Winged helix" DNA-binding domain C-terminal domain of arginine repressor 11
Homocysteine S-methyltransferase Dihydropteroate synthetase-like 11
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 11
E set domains Carbohydrate binding domain 11
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 11
P-loop containing nucleoside triphosphate hydrolases Cobalamin (vitamin B12)-dependent enzymes 11
vWA-like vWA-like 11
PUA domain-like alpha/beta knot 11
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Pyrimidine nucleoside phosphorylase C-terminal domain 11
ABC transporter involved in vitamin B12 uptake, BtuC ABC transporter involved in vitamin B12 uptake, BtuC 11
Nucleic acid-binding proteins BRCT domain 11
PGBD-like Cysteine proteinases 11
Globin-like Methyl-accepting chemotaxis protein (MCP) signaling domain 11
Penicillin-binding protein 2x (pbp-2x), c-terminal domain Penicillin-binding protein 2x (pbp-2x), c-terminal domain 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 11
a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Cytochrome c 11
TGS-like ThrRS/AlaRS common domain 11
Sensory domain-like Homodimeric domain of signal transducing histidine kinase 11
FucI/AraA N-terminal and middle domains FucI/AraA C-terminal domain-like 11
AraD/HMP-PK domain-like NAD(P)-binding Rossmann-fold domains 11
Nucleic acid-binding proteins Putative DNA-binding domain 11
NAD(P)-binding Rossmann-fold domains Homeodomain-like 11
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB transmembrane domain 11
PreATP-grasp domain Methylglyoxal synthase-like 11
Homocysteine S-methyltransferase Cobalamin (vitamin B12)-binding domain 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
Homeodomain-like NagB/RpiA/CoA transferase-like 11
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 11
CheY-binding domain of CheA ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
SGNH hydrolase Fibronectin type III 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 11
Galactose-binding domain-like beta-Galactosidase/glucuronidase domain 11
DnaK suppressor protein DksA, alpha-hairpin domain Glucocorticoid receptor-like (DNA-binding domain) 11
Dihydropteroate synthetase-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 11
PreATP-grasp domain Aldolase 11
DNA polymerase beta, N-terminal domain-like Nucleotidyltransferase 11
Homocysteine S-methyltransferase Methionine synthase domain 11
Dihydropteroate synthetase-like Cobalamin (vitamin B12)-binding domain 11
Nucleic acid-binding proteins Anticodon-binding domain of PheRS 11
DNA-glycosylase Acyl-CoA N-acyltransferases (Nat) 11
Zinc beta-ribbon DNA primase core 11
DinB/YfiT-like putative metalloenzymes Acyl-CoA N-acyltransferases (Nat) 11
Class II aaRS and biotin synthetases YbaK/ProRS associated domain 11
ParB/Sulfiredoxin KorB DNA-binding domain-like 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
beta-Galactosidase/glucuronidase domain beta-Galactosidase/glucuronidase domain 11
Pyruvate-ferredoxin oxidoreductase, PFOR, domain III Thiamin diphosphate-binding fold (THDP-binding) 11
Periplasmic binding protein-like II ACT-like 11
Class II aaRS and biotin synthetases SufE/NifU 11
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 11
Adenine nucleotide alpha hydrolases-like PheT/TilS domain 11
Acyl-CoA N-acyltransferases (Nat) SCP-like 11
5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain 11
TGS-like Class II aaRS ABD-related 11
beta-Galactosidase/glucuronidase domain (Trans)glycosidases 11
cAMP-binding domain-like "Winged helix" DNA-binding domain 11
Adenine nucleotide alpha hydrolases-like DHS-like NAD/FAD-binding domain 11
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 11
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 11
PDZ domain-like PGBD-like 11
Aspartate/glutamate racemase Aspartate/glutamate racemase 11
CBS-domain pair ACT-like 11
Hypothetical protein SAV1430 ARM repeat 11
EAL domain-like Sensory domain-like 11
YhbC-like, N-terminal domain YhbC-like, C-terminal domain 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
Dihydropteroate synthetase-like Methionine synthase activation domain-like 11
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 11
PheT/TilS domain Class II aaRS and biotin synthetases 11
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 11
cAMP-binding domain-like Nucleotidyltransferase 11
Chitinase insertion domain Carbohydrate binding domain 11
S-adenosyl-L-methionine-dependent methyltransferases NAD(P)-binding Rossmann-fold domains 11
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
P-loop containing nucleoside triphosphate hydrolases SMR domain-like 11
Histidine-containing phosphotransfer domain, HPT domain CheY-binding domain of CheA 11
Tex N-terminal region-like RuvA domain 2-like 11
R1 subunit of ribonucleotide reductase, N-terminal domain PFL-like glycyl radical enzymes 11
PheT/TilS domain Anticodon-binding domain of PheRS 11
DNA-glycosylase Nudix 11
HprK N-terminal domain-like PEP carboxykinase-like 11
Actin-like ATPase domain HD-domain/PDEase-like 11
YajQ-like YajQ-like 11
Formate/glycerate dehydrogenase catalytic domain-like Serine metabolism enzymes domain 11
NTF2-like Penicillin binding protein dimerisation domain 11
Fibronectin type III Fibronectin type III 11
Cobalamin (vitamin B12)-binding domain Radical SAM enzymes 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheW-like 11
PHP domain-like RuvA domain 2-like 11
Class II aaRS and biotin synthetases Translation proteins 11
GAF domain-like Homeodomain-like 11
Tetracyclin repressor-like, C-terminal domain FAD/NAD(P)-binding domain 11
Nitrite/Sulfite reductase N-terminal domain-like Nitrite/Sulfite reductase N-terminal domain-like 11
L9 N-domain-like Ribosomal protein L9 C-domain 11
HAD-like Acyl-CoA N-acyltransferases (Nat) 11
P-loop containing nucleoside triphosphate hydrolases TrpR-like 11
Tex N-terminal region-like Ribonuclease H-like 11
NagB/RpiA/CoA transferase-like alpha-helical ferredoxin 11
all-alpha NTP pyrophosphatases all-alpha NTP pyrophosphatases 11
Transcription factor NusA, N-terminal domain Nucleic acid-binding proteins 11
Starch-binding domain-like Starch-binding domain-like 11
Homo-oligomeric flavin-containing Cys decarboxylases, HFCD CoaB-like 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
PK beta-barrel domain-like Phosphohistidine domain 11
Nucleotidyltransferase PHP domain-like 11
post-HMGL domain-like Single hybrid motif 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FMN-linked oxidoreductases 11
Zinc beta-ribbon N-terminal domain of DnaB helicase 11
"Winged helix" DNA-binding domain C-terminal domain of transcriptional repressors 11
GAF domain-like C-terminal effector domain of the bipartite response regulators 11
Ribonuclease H-like TPR-like 11
THUMP domain-like Adenine nucleotide alpha hydrolases-like 11
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 11
HD-domain/PDEase-like ACT-like 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 11
Translation proteins Initiation factor IF2/eIF5b, domain 3 11
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 11
NAD(P)-binding Rossmann-fold domains Siroheme synthase middle domains-like 11
GroEL-intermediate domain like GroEL apical domain-like 11
UbiD C-terminal domain-like UbiD C-terminal domain-like 11
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 11
Nucleic acid-binding proteins HD-domain/PDEase-like 11
CO dehydrogenase molybdoprotein N-domain-like CO dehydrogenase flavoprotein C-terminal domain-like 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) Homeodomain-like 11
PK C-terminal domain-like Phosphohistidine domain 11
lambda repressor-like DNA-binding domains SinR repressor dimerisation domain-like 11
Concanavalin A-like lectins/glucanases Concanavalin A-like lectins/glucanases 11
Nitrite and sulphite reductase 4Fe-4S domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
Duplicated hybrid motif LysM domain 11
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 11
FAD-binding/transporter-associated domain-like Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain 11
ParB/Sulfiredoxin S-adenosyl-L-methionine-dependent methyltransferases 11
Molybdenum cofactor biosynthesis proteins CinA-like 11
Nucleic acid-binding proteins GAD domain-like 11
Calcium ATPase, transduction domain A Metal cation-transporting ATPase, ATP-binding domain N 11
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 11
RuvA domain 2-like RuvA domain 2-like 11
Nucleotidyltransferase PAP/OAS1 substrate-binding domain 11
Glutathione synthetase ATP-binding domain-like post-HMGL domain-like 11
Rhomboid-like TPR-like 11
TGS-like ACT-like 11
Aldolase Single hybrid motif 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
Concanavalin A-like lectins/glucanases Galactose-binding domain-like 11
6-phosphogluconate dehydrogenase C-terminal domain-like ACT-like 11
"Winged helix" DNA-binding domain NAD(P)-binding Rossmann-fold domains 11
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 11
PreATP-grasp domain Single hybrid motif 11
TrmE connector domain P-loop containing nucleoside triphosphate hydrolases 11
Nucleic acid-binding proteins "Winged helix" DNA-binding domain 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 11
beta-N-acetylhexosaminidase-like domain (Trans)glycosidases 11
Homeodomain-like FAD/NAD(P)-binding domain 11
5' to 3' exonuclease, C-terminal subdomain DNA/RNA polymerases 11
Histidine-containing phosphotransfer domain, HPT domain Homodimeric domain of signal transducing histidine kinase 11
DeoB insert domain-like Alkaline phosphatase-like 11
GAF domain-like Nucleotide cyclase 11
P-loop containing nucleoside triphosphate hydrolases C-terminal UvrC-binding domain of UvrB 11
Galactose mutarotase-like Putative glucosidase YicI, C-terminal domain 11
Obg GTP-binding protein N-terminal domain Obg GTP-binding protein C-terminal domain 11
Nucleic acid-binding proteins ArfGap/RecO-like zinc finger 11
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 11
Class I glutamine amidotransferase-like LD-carboxypeptidase A C-terminal domain-like 11
Fe-S cluster assembly (FSCA) domain-like P-loop containing nucleoside triphosphate hydrolases 11
FliG FliG 11
Molybdenum cofactor biosynthesis proteins MoeA C-terminal domain-like 11
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 11
6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 11
TPR-like Hypothetical protein MPN330 11
Transcription factor NusA, N-terminal domain Prokaryotic type KH domain (KH-domain type II) 11
FAD/NAD(P)-binding domain ISP domain 11
Periplasmic binding protein-like II Homodimeric domain of signal transducing histidine kinase 11
Heme-dependent peroxidases Heme-dependent peroxidases 11
FAD/NAD(P)-binding domain Nitrite/Sulfite reductase N-terminal domain-like 11
RuvA domain 2-like BRCT domain 11
Nucleic acid-binding proteins Prokaryotic type KH domain (KH-domain type II) 11
LysM domain L,D-transpeptidase catalytic domain-like 11
PRC-barrel domain PRC-barrel domain 11
PheT/TilS domain Putative DNA-binding domain 11
Fibronectin type III Carbohydrate binding domain 11
Pyruvate-ferredoxin oxidoreductase, PFOR, domain III TK C-terminal domain-like 11
(Trans)glycosidases Carbohydrate binding domain 11
P-loop containing nucleoside triphosphate hydrolases CarD-like 11
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 11
Putative DNA-binding domain Anticodon-binding domain of PheRS 11
Cupredoxins Cupredoxins 11
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 11
GroEL equatorial domain-like GroEL apical domain-like 11
DNA polymerase beta, N-terminal domain-like PHP domain-like 11
RuvA domain 2-like DNA helicase RuvA subunit, C-terminal domain 11
HD-domain/PDEase-like P-loop containing nucleoside triphosphate hydrolases 11
AbrB/MazE/MraZ-like GAF domain-like 11
Nucleotidylyl transferase Riboflavin kinase-like 11
PPK N-terminal domain-like PHP14-like 11
Periplasmic binding protein-like II PYP-like sensor domain (PAS domain) 11
Adhesin YadA, collagen-binding domain Adhesin YadA, collagen-binding domain 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
Nucleic acid-binding proteins DNA helicase RuvA subunit, C-terminal domain 11
NagB/RpiA/CoA transferase-like NagB/RpiA/CoA transferase-like 11
Galactose-binding domain-like Galactose mutarotase-like 11
S13-like H2TH domain Glucocorticoid receptor-like (DNA-binding domain) 11
ClpP/crotonase PGBD-like 11
DNA repair protein MutS, domain III SMR domain-like 11
Chaperone J-domain HSP40/DnaJ peptide-binding domain 11
Nucleotidyltransferase ACT-like 11
Glutamyl tRNA-reductase catalytic, N-terminal domain Glutamyl tRNA-reductase dimerization domain 11
DNA ligase/mRNA capping enzyme, catalytic domain RuvA domain 2-like 11
Nucleotide cyclase EAL domain-like 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
Tetrahydrobiopterin biosynthesis enzymes-like Tetrahydrobiopterin biosynthesis enzymes-like 11
LysM domain (Trans)glycosidases 11
LysM domain Zn-dependent exopeptidases 11
Invasin/intimin cell-adhesion fragments (Trans)glycosidases 11
lambda repressor-like DNA-binding domains TPR-like 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
(Trans)glycosidases Chitinase insertion domain 11
CBS-domain pair Thioesterase/thiol ester dehydrase-isomerase 11
NAD(P)-binding Rossmann-fold domains Glutamyl tRNA-reductase dimerization domain 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
4Fe-4S ferredoxins ARM repeat 11
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 11
UROD/MetE-like UROD/MetE-like 11
Molybdenum cofactor-binding domain FAD-binding/transporter-associated domain-like 11
P-loop containing nucleoside triphosphate hydrolases TGS-like 11
Beta-D-glucan exohydrolase, C-terminal domain Galactose-binding domain-like 11
Protein kinase-like (PK-like) Protein kinase-like (PK-like) 11
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 11
GAF domain-like GAF domain-like 11
Acyl-CoA N-acyltransferases (Nat) Carbon-nitrogen hydrolase 11
PKD domain Galactose-binding domain-like 11
Metal cation-transporting ATPase, ATP-binding domain N HAD-like 11
NAD(P)-binding Rossmann-fold domains P-loop containing nucleoside triphosphate hydrolases 11
Urease metallochaperone UreE, N-terminal domain Urease metallochaperone UreE, C-terminal domain 11
PA domain Zn-dependent exopeptidases 11
NAD(P)-binding Rossmann-fold domains PYP-like sensor domain (PAS domain) 11
Ribosomal protein S5 domain 2-like HSP90 C-terminal domain 11
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
NAD(P)-binding Rossmann-fold domains ClpP/crotonase 11
Translation proteins PRC-barrel domain 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphohistidine domain 11
"Winged helix" DNA-binding domain Thioesterase/thiol ester dehydrase-isomerase 11
Glycosyl hydrolase domain Putative glucosidase YicI, C-terminal domain 11
Hsp33 domain HSP33 redox switch-like 11
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 11
YrdC/RibB RibA-like 11
(Trans)glycosidases Putative glucosidase YicI, C-terminal domain 11
Heme-dependent catalase-like Class I glutamine amidotransferase-like 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphoenolpyruvate/pyruvate domain 11
PIN domain-like DNA/RNA polymerases 11
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Homodimeric domain of signal transducing histidine kinase CheW-like 11
Starch-binding domain-like E set domains 11
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Alpha subunit of glutamate synthase, C-terminal domain 11
PDZ domain-like Ribosomal protein S5 domain 2-like 11
Flavoproteins Ferredoxin reductase-like, C-terminal NADP-linked domain 11
2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain Alkaline phosphatase-like 11
Rhodanese/Cell cycle control phosphatase Rhodanese/Cell cycle control phosphatase 11
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 11
PDZ domain-like ClpP/crotonase 11
lambda repressor-like DNA-binding domains RmlC-like cupins 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
Class II aaRS and biotin synthetases C-terminal domain of transcriptional repressors 11
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 11
Ferritin-like RmlC-like cupins 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase HSP90 C-terminal domain 11
5' to 3' exonuclease, C-terminal subdomain Ribonuclease H-like 11
Rho N-terminal domain-like Nucleic acid-binding proteins 11
Cobalamin (vitamin B12)-binding domain P-loop containing nucleoside triphosphate hydrolases 11
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 11
P-loop containing nucleoside triphosphate hydrolases Obg GTP-binding protein C-terminal domain 11
Tryptophan synthase beta subunit-like PLP-dependent enzymes ACT-like 11
Chemotaxis receptor methyltransferase CheR, N-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 11
HisI-like all-alpha NTP pyrophosphatases 11
N-terminal domain of DnaB helicase P-loop containing nucleoside triphosphate hydrolases 11
ACT-like Formyltransferase 11
"Winged helix" DNA-binding domain Periplasmic binding protein-like I 11
Cytochrome c oxidase subunit II-like, transmembrane region Cytochrome c 11
Cystatin/monellin Cystatin/monellin 11
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 11
Starch-binding domain-like (Trans)glycosidases 11
Rudiment single hybrid motif Aldolase 11
Carbamate kinase-like PUA domain-like 11
Ribonuclease H-like DNA/RNA polymerases 11
SMAD/FHA domain C-terminal effector domain of the bipartite response regulators 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
PUA domain-like Ribosomal protein S5 domain 2-like 11
CarD-like TRCF domain-like 11
HprK N-terminal domain-like Thioesterase/thiol ester dehydrase-isomerase 11
beta-Galactosidase/glucuronidase domain Galactose mutarotase-like 11
P-loop containing nucleoside triphosphate hydrolases ACT-like 11
Rudiment single hybrid motif post-HMGL domain-like 11
Invasin/intimin cell-adhesion fragments Beta-D-glucan exohydrolase, C-terminal domain 11
"Winged helix" DNA-binding domain PRTase-like 11
Respiratory nitrate reductase 1 gamma chain alpha-helical ferredoxin 11
Putative DNA-binding domain Probable bacterial effector-binding domain 11
PHP14-like Phospholipase D/nuclease 11
Methionine synthase domain Cobalamin (vitamin B12)-binding domain 11
"Winged helix" DNA-binding domain Putative transcriptional regulator TM1602, C-terminal domain 11
Flavoproteins Riboflavin synthase domain-like 11
Aconitase iron-sulfur domain LeuD/IlvD-like 11
FMN-binding split barrel UbiD C-terminal domain-like 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain ACT-like 11
Formyltransferase FMT C-terminal domain-like 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
Class II aaRS and biotin synthetases GAD domain-like 11
Nucleotide-binding domain Nucleotide-binding domain 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Nucleic acid-binding proteins 11
Families 57/38 glycoside transferase middle domain UDP-Glycosyltransferase/glycogen phosphorylase 11
Glutamine synthetase/guanido kinase GatB/YqeY motif 11
Sec2 N-terminal region Duplicated hybrid motif 11
Putative DNA-binding domain Antibiotic binding domain of TipA-like multidrug resistance regulators 11
PGBD-like Barwin-like endoglucanases 11
GAF domain-like PYP-like sensor domain (PAS domain) 11
lambda integrase-like, N-terminal domain DNA breaking-rejoining enzymes 11
Glutathione synthetase ATP-binding domain-like Single hybrid motif 11
Histidine-containing phosphotransfer domain, HPT domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Galactose-binding domain-like Galactose-binding domain-like 11
Ribonuclease H-like RuvA domain 2-like 11
Metallo-dependent hydrolases PLP-dependent transferases 11
Translation proteins Translation proteins 11
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 11
Tex N-terminal region-like Nucleic acid-binding proteins 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Adenine nucleotide alpha hydrolases-like 11
Nucleotide cyclase DHH phosphoesterases 11
6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 11
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 11
Alpha-L RNA-binding motif S-adenosyl-L-methionine-dependent methyltransferases 11
Adenine nucleotide alpha hydrolases-like MesJ substrate recognition domain-like 11
Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Pyrimidine nucleoside phosphorylase C-terminal domain 11
CheY-binding domain of CheA Homodimeric domain of signal transducing histidine kinase 11
Glutathione synthetase ATP-binding domain-like Aldolase 11
Globin-like Ferredoxin reductase-like, C-terminal NADP-linked domain 11
Ribonuclease H-like P-loop containing nucleoside triphosphate hydrolases 11
Homocysteine S-methyltransferase Methionine synthase activation domain-like 11
RuvA domain 2-like JAB1/MPN domain 11
Rho N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
GAF domain-like Homodimeric domain of signal transducing histidine kinase 11
Nucleotidylyl transferase tRNA-binding arm 11
FMN-linked oxidoreductases Alpha subunit of glutamate synthase, C-terminal domain 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
Prokaryotic type KH domain (KH-domain type II) Prokaryotic type KH domain (KH-domain type II) 11
HMA, heavy metal-associated domain HMA, heavy metal-associated domain 11
GIY-YIG endonuclease C-terminal UvrC-binding domain of UvrB 11
HD-domain/PDEase-like Nucleotidyltransferase 11
NTF2-like beta-lactamase/transpeptidase-like 11
HprK N-terminal domain-like CBS-domain pair 11
N-terminal domain of MutM-like DNA repair proteins Glucocorticoid receptor-like (DNA-binding domain) 11
GroEL equatorial domain-like GroEL-intermediate domain like 11
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 11
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 11
Elongation factor Ts (EF-Ts), dimerisation domain Elongation factor Ts (EF-Ts), dimerisation domain 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 11
Glycoside hydrolase/deacetylase UDP-Glycosyltransferase/glycogen phosphorylase 11

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