SUPERFAMILY 1.75 HMM library and genome assignments server

Domain combination pairs in Gallionella capsiferriformans ES-2

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

  • For a list of unique full length architectures for this genome click here (can be slow).
Adjacent domain pairs graph

Graph of adjacent domain pairs.


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Domain combination pairs

663 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
PYP-like sensor domain (PAS domain) Nucleotide cyclase 4029
PYP-like sensor domain (PAS domain) PYP-like sensor domain (PAS domain) 3733
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 3725
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 3015
Nucleotide cyclase EAL domain-like 2521
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 2422
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 2119
PYP-like sensor domain (PAS domain) EAL domain-like 2018
PYP-like sensor domain (PAS domain) CheY-like 1413
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 134
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB transmembrane domain 134
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 134
HAMP domain-like PYP-like sensor domain (PAS domain) 1310
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB transmembrane domain 134
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 134
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 134
PYP-like sensor domain (PAS domain) GAF domain-like 1212
Actin-like ATPase domain Actin-like ATPase domain 113
CheY-like C-terminal effector domain of the bipartite response regulators 112
CheY-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 1111
CheY-like Nucleotide cyclase 107
HAD-like Calcium ATPase, transmembrane domain M 104
CheY-like Homodimeric domain of signal transducing histidine kinase 1010
TPR-like TPR-like 108
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 104
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Histidine-containing phosphotransfer domain, HPT domain 108
"Winged helix" DNA-binding domain Periplasmic binding protein-like II 101
Calcium ATPase, transduction domain A HAD-like 104
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 93
Homodimeric domain of signal transducing histidine kinase Histidine-containing phosphotransfer domain, HPT domain 97
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 94
CheY-like Histidine-containing phosphotransfer domain, HPT domain 98
P-loop containing nucleoside triphosphate hydrolases Translation proteins 85
HAMP domain-like Nucleotide cyclase 75
GAF domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 77
CheY-like HD-domain/PDEase-like 72
CheY-like CheY-like 77
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 73
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 74
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 74
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein S5 domain 2-like 76
GAF domain-like Homodimeric domain of signal transducing histidine kinase 66
CheY-like Homeodomain-like 64
HAMP domain-like Homodimeric domain of signal transducing histidine kinase 64
HAMP domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 64
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 65
PYP-like sensor domain (PAS domain) Methyl-accepting chemotaxis protein (MCP) signaling domain 64
PYP-like sensor domain (PAS domain) Histidine-containing phosphotransfer domain, HPT domain 66
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 64
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 63
Alpha-L RNA-binding motif Pseudouridine synthase 61
CBS-domain pair Nucleotide cyclase 66
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 62
Sensory domain-like PYP-like sensor domain (PAS domain) 55
EspE N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 53
DNA methylase specificity domain DNA methylase specificity domain 52
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 52
HMA, heavy metal-associated domain HAD-like 52
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 53
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 52
PurM N-terminal domain-like PurM C-terminal domain-like 52
GAF domain-like Nucleotide cyclase 55
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 53
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 54
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 43
HAMP domain-like EAL domain-like 44
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheW-like 42
CBS-domain pair CBS-domain pair 44
Triger factor/SurA peptide-binding domain-like FKBP-like 44
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 42
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 42
GAF domain-like CheY-like 44
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 44
CheY-like P-loop containing nucleoside triphosphate hydrolases 42
GAF domain-like HD-domain/PDEase-like 43
Homodimeric domain of signal transducing histidine kinase CheW-like 42
PreATP-grasp domain Rudiment single hybrid motif 42
Chemotaxis receptor methyltransferase CheR, N-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 43
CheW-like CheY-like 41
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 41
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 42
Translation proteins EF-G C-terminal domain-like 43
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 42
Periplasmic binding protein-like II Nucleotide cyclase 33
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 32
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 32
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 32
MurCD N-terminal domain MurD-like peptide ligases, catalytic domain 31
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 32
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 31
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 32
Thiolase-like Thiolase-like 31
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 33
HD-domain/PDEase-like Nucleotide cyclase 31
GAF domain-like EAL domain-like 33
TPR-like UDP-Glycosyltransferase/glycogen phosphorylase 33
Cytochrome c Cytochrome c 32
Thioredoxin-like GST C-terminal domain-like 31
Sensory domain-like EAL domain-like 33
ACT-like ACT-like 33
Metal cation-transporting ATPase, ATP-binding domain N HAD-like 31
EF-G C-terminal domain-like EF-G C-terminal domain-like 32
Histidine-containing phosphotransfer domain, HPT domain CheW-like 31
Metal cation-transporting ATPase, ATP-binding domain N Calcium ATPase, transmembrane domain M 31
Nucleic acid-binding proteins Nucleic acid-binding proteins 33
NAD(P)-binding Rossmann-fold domains TrkA C-terminal domain-like 33
Periplasmic binding protein-like II PYP-like sensor domain (PAS domain) 33
GAF domain-like GAF domain-like 33
Homeodomain-like Tetracyclin repressor-like, C-terminal domain 31
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 33
cAMP-binding domain-like "Winged helix" DNA-binding domain 31
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 31
Class II aaRS and biotin synthetases Class II aaRS ABD-related 33
Nucleic acid-binding proteins RuvA domain 2-like 33
CBS-domain pair EAL domain-like 33
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 32
Calcium ATPase, transduction domain A Metal cation-transporting ATPase, ATP-binding domain N 31
CheY-like EAL domain-like 33
Nucleotidyltransferase HD-domain/PDEase-like 33
MurCD N-terminal domain MurD-like peptide ligases, peptide-binding domain 31
Sensory domain-like Nucleotide cyclase 33
GreA transcript cleavage protein, N-terminal domain FKBP-like 21
Putative DNA-binding domain CheY-like 21
PDZ domain-like ClpP/crotonase 21
Sensory domain-like Homodimeric domain of signal transducing histidine kinase 22
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 22
YgfB-like Sec-C motif 21
Nqo1 FMN-binding domain-like Nqo1 middle domain-like 22
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 21
PLP-binding barrel Alanine racemase C-terminal domain-like 22
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
Trypsin-like serine proteases PDZ domain-like 22
N-terminal domain of DnaB helicase P-loop containing nucleoside triphosphate hydrolases 21
Formyltransferase FMT C-terminal domain-like 21
Single hybrid motif CoA-dependent acyltransferases 21
S-adenosyl-L-methionine-dependent methyltransferases PYP-like sensor domain (PAS domain) 22
beta-Roll beta-Roll 22
Ferredoxin reductase-like, C-terminal NADP-linked domain 2Fe-2S ferredoxin-like 22
Sensory domain-like CheY-like 22
Nucleic acid-binding proteins Translation proteins SH3-like domain 22
Nucleotidyltransferase Nucleotidyltransferase substrate binding subunit/domain 22
HD-domain/PDEase-like HD-domain/PDEase-like 21
Single hybrid motif Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 21
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 22
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 22
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 21
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 22
Methylesterase CheB, C-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 22
FKBP-like FKBP-like 22
L30e-like alpha/beta knot 21
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 21
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 22
HD-domain/PDEase-like ACT-like 22
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 21
Aconitase iron-sulfur domain LeuD/IlvD-like 21
Class II aaRS and biotin synthetases ThrRS/AlaRS common domain 22
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Adenine nucleotide alpha hydrolases-like 21
Methylesterase CheB, C-terminal domain Chemotaxis receptor methyltransferase CheR, N-terminal domain 22
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 22
Nucleotidyltransferase Poly A polymerase C-terminal region-like 22
Protein kinase-like (PK-like) P-loop containing nucleoside triphosphate hydrolases 22
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 22
Glutathione synthetase ATP-binding domain-like MurD-like peptide ligases, catalytic domain 22
CheY-like TPR-like 22
CBS-domain pair PYP-like sensor domain (PAS domain) 22
"Winged helix" DNA-binding domain Chorismate lyase-like 21
PDZ domain-like PDZ domain-like 22
Nucleotide cyclase Hemerythrin-like 22
Formate dehydrogenase/DMSO reductase, domains 1-3 ADC-like 22
HCP-like Sporulation related repeat 21
CBS-domain pair GAF domain-like 22
Nqo1 middle domain-like Nqo1C-terminal domain-like 22
tRNA-binding arm Class II aaRS and biotin synthetases 21
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 21
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 22
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 22
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 21
Composite domain of metallo-dependent hydrolases Metallo-dependent hydrolases 22
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 22
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 21
Nucleotidyltransferase TGS-like 22
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 22
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 22
Sm-like ribonucleoproteins Mechanosensitive channel protein MscS (YggB), C-terminal domain 22
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 22
alpha-helical ferredoxin Nucleotide-binding domain 22
Chemotaxis receptor methyltransferase CheR, N-terminal domain PYP-like sensor domain (PAS domain) 22
UDP-Glycosyltransferase/glycogen phosphorylase UDP-Glycosyltransferase/glycogen phosphorylase 22
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
NAD(P)-binding Rossmann-fold domains ACT-like 22
Sensory domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 22
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 21
Nucleotidyltransferase ACT-like 22
Methylesterase CheB, C-terminal domain PYP-like sensor domain (PAS domain) 22
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 21
FAD/NAD(P)-binding domain HI0933 insert domain-like 21
GAF domain-like Histidine-containing phosphotransfer domain, HPT domain 22
Folate-binding domain Aminomethyltransferase beta-barrel domain 21
CBS-domain pair FAD-binding/transporter-associated domain-like 21
Glutathione synthetase ATP-binding domain-like Succinyl-CoA synthetase domains 22
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 21
Penicillin binding protein dimerisation domain beta-lactamase/transpeptidase-like 21
Riboflavin synthase domain-like 2Fe-2S ferredoxin-like 22
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 22
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex CoA-dependent acyltransferases 21
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 21
TPR-like P-loop containing nucleoside triphosphate hydrolases 22
Phospholipase D/nuclease Phospholipase D/nuclease 22
P-loop containing nucleoside triphosphate hydrolases Restriction endonuclease-like 21
HAMP domain-like Methyl-accepting chemotaxis protein (MCP) signaling domain 22
CheY-like Methylesterase CheB, C-terminal domain 21
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 22
HD-domain/PDEase-like TGS-like 22
Nqo1 FMN-binding domain-like Nqo1C-terminal domain-like 22
E set domains (Trans)glycosidases 11
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 11
5' to 3' exonuclease, C-terminal subdomain DNA/RNA polymerases 11
FGAM synthase PurL, linker domain PurM N-terminal domain-like 11
PheT/TilS domain Putative DNA-binding domain 11
Periplasmic binding protein-like II ACT-like 11
Thioredoxin-like Nqo1 middle domain-like 11
Glutathione synthetase ATP-binding domain-like Acyl-CoA N-acyltransferases (Nat) 11
PreATP-grasp domain Methylglyoxal synthase-like 11
Zinc beta-ribbon DNA primase DnaG, C-terminal domain 11
Lysozyme-like LysM domain 11
Succinyl-CoA synthetase domains Succinyl-CoA synthetase domains 11
P-loop containing nucleoside triphosphate hydrolases CarD-like 11
MgtE N-terminal domain-like Magnesium transport protein CorA, transmembrane region 11
Glutathione synthetase ATP-binding domain-like Single hybrid motif 11
Zinc beta-ribbon DNA primase core 11
Putative DNA-binding domain P-loop containing nucleoside triphosphate hydrolases 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 11
Ribosomal protein S5 domain 2-like HSP90 C-terminal domain 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
Epsilon subunit of F1F0-ATP synthase N-terminal domain Epsilon subunit of F1F0-ATP synthase C-terminal domain 11
Periplasmic binding protein-like II Periplasmic binding protein-like II 11
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 11
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 11
NAD(P)-binding Rossmann-fold domains ClpP/crotonase 11
Sensory domain-like Sensory domain-like 11
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 11
Nucleotide-diphospho-sugar transferases RmlC-like cupins 11
GroEL-intermediate domain like GroEL apical domain-like 11
Class II aaRS and biotin synthetases GAD domain-like 11
L9 N-domain-like Ribosomal protein L9 C-domain 11
Thioredoxin-like Nqo1 FMN-binding domain-like 11
Glutathione synthetase ATP-binding domain-like Phosphoenolpyruvate/pyruvate domain 11
Voltage-gated potassium channels NAD(P)-binding Rossmann-fold domains 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
Rhodanese/Cell cycle control phosphatase DsrEFH-like 11
Nqo1 FMN-binding domain-like alpha-helical ferredoxin 11
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 11
2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain Alkaline phosphatase-like 11
Toll/Interleukin receptor TIR domain TPR-like 11
Single hybrid motif FAD/NAD-linked reductases, dimerisation (C-terminal) domain 11
Integrin alpha N-terminal domain beta-Roll 11
Nucleotidylyl transferase Nucleic acid-binding proteins 11
cAMP-binding domain-like 4Fe-4S ferredoxins 11
TerB-like Chaperone J-domain 11
Homocysteine S-methyltransferase Dihydropteroate synthetase-like 11
2Fe-2S ferredoxin-like Formate dehydrogenase/DMSO reductase, domains 1-3 11
Tryptophan synthase beta subunit-like PLP-dependent enzymes ACT-like 11
NagB/RpiA/CoA transferase-like D-ribose-5-phosphate isomerase (RpiA), lid domain 11
Transcription factor NusA, N-terminal domain Nucleic acid-binding proteins 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleic acid-binding proteins 11
Aminopeptidase/glucanase lid domain Zn-dependent exopeptidases 11
Tex N-terminal region-like Nucleic acid-binding proteins 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
2Fe-2S ferredoxin-like ADC-like 11
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 11
NAD(P)-binding Rossmann-fold domains UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 11
Carbamate kinase-like ACT-like 11
Dihydropteroate synthetase-like Methionine synthase activation domain-like 11
HprK N-terminal domain-like PEP carboxykinase-like 11
cAMP-binding domain-like cAMP-binding domain-like 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Nucleic acid-binding proteins 11
PurS-like FGAM synthase PurL, linker domain 11
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 11
Ribonuclease H-like RuvA domain 2-like 11
FAD-linked oxidases, C-terminal domain alpha-helical ferredoxin 11
GIY-YIG endonuclease C-terminal UvrC-binding domain of UvrB 11
Nucleic acid-binding proteins S-adenosyl-L-methionine-dependent methyltransferases 11
Chemotaxis receptor methyltransferase CheR, N-terminal domain Nucleotide cyclase 11
Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha) Thioredoxin-like 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
4Fe-4S ferredoxins ADC-like 11
Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase C-terminal domain-like 11
Hemerythrin-like C-terminal effector domain of the bipartite response regulators 11
P-loop containing nucleoside triphosphate hydrolases TrpR-like 11
Translation proteins Translation proteins 11
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 11
FAD/NAD(P)-binding domain DsrEFH-like 11
TPR-like S-adenosyl-L-methionine-dependent methyltransferases 11
Eukaryotic type KH-domain (KH-domain type I) Nucleic acid-binding proteins 11
Diaminopimelate epimerase-like Diaminopimelate epimerase-like 11
Periplasmic binding protein-like II EAL domain-like 11
Toll/Interleukin receptor TIR domain P-loop containing nucleoside triphosphate hydrolases 11
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 11
PreATP-grasp domain Cyclophilin-like 11
Nucleic acid-binding proteins Rad51 N-terminal domain-like 11
PRTase-like PRTase-like 11
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 11
FAD/NAD-linked reductases, dimerisation (C-terminal) domain DsrEFH-like 11
YajQ-like YajQ-like 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
TGS-like ThrRS/AlaRS common domain 11
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 11
Nucleotidylyl transferase tRNA-binding arm 11
Bacterial muramidases Lysozyme-like 11
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
Homocysteine S-methyltransferase Methionine synthase activation domain-like 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
GroEL equatorial domain-like GroEL-intermediate domain like 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
Globin-like PYP-like sensor domain (PAS domain) 11
Nucleic acid-binding proteins GAD domain-like 11
FAD/NAD(P)-binding domain cAMP-binding domain-like 11
RNase III domain-like dsRNA-binding domain-like 11
Nucleotide cyclase SMAD/FHA domain 11
FAD-binding/transporter-associated domain-like Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain 11
Chorismate mutase II ACT-like 11
Rad51 N-terminal domain-like Rad51 N-terminal domain-like 11
UROD/MetE-like UROD/MetE-like 11
Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), C-terminal domain 11
NAD(P)-binding Rossmann-fold domains Siroheme synthase middle domains-like 11
Homo-oligomeric flavin-containing Cys decarboxylases, HFCD CoaB-like 11
ACT-like Formyltransferase 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Alpha subunit of glutamate synthase, C-terminal domain 11
CheC-like Surface presentation of antigens (SPOA) 11
GIY-YIG endonuclease RuvA domain 2-like 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 11
Barwin-like endoglucanases Sporulation related repeat 11
Elongation factor Ts (EF-Ts), dimerisation domain Elongation factor Ts (EF-Ts), dimerisation domain 11
Methylated DNA-protein cysteine methyltransferase domain Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
Prokaryotic type KH domain (KH-domain type II) Prokaryotic type KH domain (KH-domain type II) 11
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 11
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 11
Prokaryotic type I DNA topoisomerase Zinc beta-ribbon 11
RuBisCO, large subunit, small (N-terminal) domain RuBisCo, C-terminal domain 11
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 11
Actin-like ATPase domain HD-domain/PDEase-like 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
Homocysteine S-methyltransferase Methionine synthase domain 11
Glutathione synthetase ATP-binding domain-like PH0987 N-terminal domain-like 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain ACT-like 11
NAD(P)-binding Rossmann-fold domains Tetrapyrrole methylase 11
Cobalamin (vitamin B12)-binding domain Methionine synthase activation domain-like 11
PreATP-grasp domain PH0987 N-terminal domain-like 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Enolase N-terminal domain-like Enolase C-terminal domain-like 11
PheT/TilS domain Anticodon-binding domain of PheRS 11
Rudiment single hybrid motif PH0987 N-terminal domain-like 11
Nitrite and sulphite reductase 4Fe-4S domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 11
beta-lactamase/transpeptidase-like Penicillin-binding protein associated domain 11
Single hybrid motif FAD/NAD(P)-binding domain 11
Carbamate kinase-like Acyl-CoA N-acyltransferases (Nat) 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
R1 subunit of ribonucleotide reductase, N-terminal domain PFL-like glycyl radical enzymes 11
Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain PreATP-grasp domain 11
NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains 11
NAD(P)-binding Rossmann-fold domains Glutamyl tRNA-reductase dimerization domain 11
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 11
Porins Porins 11
Rho N-terminal domain-like Nucleic acid-binding proteins 11
P-loop containing nucleoside triphosphate hydrolases HRDC-like 11
ISP domain Bet v1-like 11
PreATP-grasp domain Single hybrid motif 11
Acylphosphatase/BLUF domain-like YrdC/RibB 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleotidylyl transferase 11
Restriction endonuclease-like Zinc beta-ribbon 11
GAF domain-like EspE N-terminal domain-like 11
beta-Roll Cadherin-like 11
PUA domain-like S-adenosyl-L-methionine-dependent methyltransferases 11
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 11
Ribonuclease H-like DNA/RNA polymerases 11
Aminoacid dehydrogenase-like, N-terminal domain Isocitrate/Isopropylmalate dehydrogenase-like 11
YdfO-like YdfO-like 11
Voltage-gated potassium channels TrkA C-terminal domain-like 11
PurS-like PurM N-terminal domain-like 11
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 11
Translation proteins Ribosomal protein S5 domain 2-like 11
PPK N-terminal domain-like Phospholipase D/nuclease 11
PIN domain-like Ribonuclease H-like 11
TGS-like Class II aaRS and biotin synthetases 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 11
Translation proteins Initiation factor IF2/eIF5b, domain 3 11
Globin-like Nucleotide cyclase 11
Hemerythrin-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 11
SpoIIaa-like cAMP-binding domain-like 11
MesJ substrate recognition domain-like PheT/TilS domain 11
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 11
DsbC/DsbG N-terminal domain-like Thioredoxin-like 11
Thioredoxin-like Nqo1C-terminal domain-like 11
Chaperone J-domain HSC20 (HSCB), C-terminal oligomerisation domain 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphoenolpyruvate/pyruvate domain 11
PLP-dependent transferases Ornithine decarboxylase C-terminal domain 11
Nucleotide-binding domain 4Fe-4S ferredoxins 11
Nucleic acid-binding proteins Anticodon-binding domain of PheRS 11
TPR-like HCP-like 11
Cyclophilin-like Single hybrid motif 11
Cyclophilin-like Cyclophilin-like 11
PUA domain-like Ribosomal protein S5 domain 2-like 11
PurM N-terminal domain-like Class I glutamine amidotransferase-like 11
EspE N-terminal domain-like EspE N-terminal domain-like 11
"Winged helix" DNA-binding domain PLP-dependent transferases 11
Nucleic acid-binding proteins BRCT domain 11
HAMP domain-like Histidine-containing phosphotransfer domain, HPT domain 11
FGAM synthase PurL, linker domain PurM C-terminal domain-like 11
Adenine nucleotide alpha hydrolases-like PheT/TilS domain 11
6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 11
Trigger factor ribosome-binding domain FKBP-like 11
E set domains Glycosyl hydrolase domain 11
2Fe-2S ferredoxin-like 4Fe-4S ferredoxins 11
C-terminal UvrC-binding domain of UvrB RuvA domain 2-like 11
FAD/NAD(P)-binding domain Rhodanese/Cell cycle control phosphatase 11
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 11
TolB, N-terminal domain Tricorn protease N-terminal domain 11
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
L domain-like Protein kinase-like (PK-like) 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
DNA clamp DNA clamp 11
Sm-like ribonucleoproteins cAMP-binding domain-like 11
S-adenosyl-L-methionine-dependent methyltransferases EAL domain-like 11
NAD(P)-binding Rossmann-fold domains Glutathione synthetase ATP-binding domain-like 11
PLP-dependent transferases PLP-dependent transferases 11
Sec-C motif TPR-like 11
Hemerythrin-like PYP-like sensor domain (PAS domain) 11
Periplasmic binding protein-like II Lysozyme-like 11
RuvA domain 2-like RuvA domain 2-like 11
CBS-domain pair CheY-like 11
cAMP-binding domain-like CBS-domain pair 11
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 11
Ribonuclease H-like Nucleic acid-binding proteins 11
DinB/YfiT-like putative metalloenzymes C-type lectin-like 11
6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 11
CarD-like TRCF domain-like 11
GroES-like NAD(P)-binding Rossmann-fold domains 11
TGS-like Class II aaRS ABD-related 11
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 11
Methylglyoxal synthase-like Cytidine deaminase-like 11
Pheromone-binding domain of LuxR-like quorum-sensing transcription factors C-terminal effector domain of the bipartite response regulators 11
Transcription factor NusA, N-terminal domain Prokaryotic type KH domain (KH-domain type II) 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
Transcription factor NusA, N-terminal domain Rad51 N-terminal domain-like 11
NTF2-like Sec-C motif 11
HAMP domain-like CheY-like 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 11
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 11
PurS-like Class I glutamine amidotransferase-like 11
SMAD/FHA domain SMAD/FHA domain 11
Rho N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
Carbon-nitrogen hydrolase Adenine nucleotide alpha hydrolases-like 11
Nucleotidylyl transferase Riboflavin kinase-like 11
Heme-dependent peroxidases Heme-dependent peroxidases 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
SirA-like DsrEFH-like 11
Succinyl-CoA synthetase domains Acyl-CoA N-acyltransferases (Nat) 11
PHP14-like Phospholipase D/nuclease 11
Nucleotidyltransferase Nucleotidyltransferase 11
"Winged helix" DNA-binding domain C-terminal domain of transcriptional repressors 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FMN-linked oxidoreductases 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
YhbC-like, N-terminal domain YhbC-like, C-terminal domain 11
FAD/NAD-linked reductases, dimerisation (C-terminal) domain SirA-like 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
Riboflavin synthase domain-like Riboflavin synthase domain-like 11
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 11
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 11
Tex N-terminal region-like RuvA domain 2-like 11
Homocysteine S-methyltransferase Cobalamin (vitamin B12)-binding domain 11
Aspartate/glutamate racemase Aspartate/glutamate racemase 11
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 11
Zinc beta-ribbon Prokaryotic SH3-related domain 11
FAD/NAD-linked reductases, dimerisation (C-terminal) domain Rhodanese/Cell cycle control phosphatase 11
5' to 3' exonuclease, C-terminal subdomain Ribonuclease H-like 11
Cyclophilin-like PH0987 N-terminal domain-like 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 11
Rhodanese/Cell cycle control phosphatase SirA-like 11
PK beta-barrel domain-like PK C-terminal domain-like 11
Glutamyl tRNA-reductase catalytic, N-terminal domain NAD(P)-binding Rossmann-fold domains 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
Nucleic acid-binding proteins Putative DNA-binding domain 11
Nudix Thiamin phosphate synthase 11
SMAD/FHA domain Multiheme cytochromes 11
Rudiment single hybrid motif Single hybrid motif 11
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 11
Phase 1 flagellin Phase 1 flagellin 11
Translation proteins PRC-barrel domain 11
"Winged helix" DNA-binding domain Class II aaRS and biotin synthetases 11
TrkA C-terminal domain-like TrkA C-terminal domain-like 11
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 11
FAD-binding/transporter-associated domain-like PreATP-grasp domain 11
DnaK suppressor protein DksA, alpha-hairpin domain Glucocorticoid receptor-like (DNA-binding domain) 11
Mechanosensitive channel protein MscS (YggB), C-terminal domain cAMP-binding domain-like 11
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 11
Rudiment single hybrid motif Cyclophilin-like 11
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 11
Hsp33 domain HSP33 redox switch-like 11
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 11
Glucocorticoid receptor-like (DNA-binding domain) P-loop containing nucleoside triphosphate hydrolases 11
"Winged helix" DNA-binding domain LexA/Signal peptidase 11
DNA primase core DNA primase DnaG, C-terminal domain 11
Macro domain-like Zn-dependent exopeptidases 11
GAF domain-like P-loop containing nucleoside triphosphate hydrolases 11
PurS-like PurM C-terminal domain-like 11
FAD/NAD(P)-binding domain SirA-like 11
Chemotaxis receptor methyltransferase CheR, N-terminal domain EAL domain-like 11
DNA ligase/mRNA capping enzyme, catalytic domain RuvA domain 2-like 11
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase HSP90 C-terminal domain 11
Methionine synthase domain Methionine synthase activation domain-like 11
Nucleotidyltransferase ARM repeat 11
Methylesterase CheB, C-terminal domain EAL domain-like 11
Pseudouridine synthase PUA domain-like 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
P-loop containing nucleoside triphosphate hydrolases MOP-like 11
OMPA-like OmpA-like 11
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 11
Siroheme synthase middle domains-like Tetrapyrrole methylase 11
TPR-like Nucleotide cyclase 11
DNA-glycosylase Nudix 11
RBP11-like subunits of RNA polymerase C-terminal domain of RNA polymerase alpha subunit 11
Glutathione synthetase ATP-binding domain-like MurD-like peptide ligases, peptide-binding domain 11
PheT/TilS domain Class II aaRS and biotin synthetases 11
EPT/RTPC-like P-loop containing nucleoside triphosphate hydrolases 11
ParB/Sulfiredoxin KorB DNA-binding domain-like 11
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 11
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 11
PIN domain-like P-loop containing nucleoside triphosphate hydrolases 11
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 11
HCP-like HCP-like 11
PIN domain-like DNA/RNA polymerases 11
Nucleotidyltransferase substrate binding subunit/domain Nucleotidyltransferase substrate binding subunit/domain 11
YbaK/ProRS associated domain Class II aaRS ABD-related 11
Thioesterase/thiol ester dehydrase-isomerase Thioesterase/thiol ester dehydrase-isomerase 11
FGAM synthase PurL, linker domain Class I glutamine amidotransferase-like 11
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 11
Glutathione synthetase ATP-binding domain-like Cyclophilin-like 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphohistidine domain 11
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 11
S-adenosyl-L-methionine-dependent methyltransferases Nucleotide cyclase 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 11
Rhodanese/Cell cycle control phosphatase PEP carboxykinase-like 11
PYP-like sensor domain (PAS domain) C-terminal effector domain of the bipartite response regulators 11
"Winged helix" DNA-binding domain GntR ligand-binding domain-like 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 11
EF-G C-terminal domain-like Ribosomal protein S5 domain 2-like 11
RuvA domain 2-like DNA helicase RuvA subunit, C-terminal domain 11
PH0987 N-terminal domain-like Single hybrid motif 11
Methylesterase CheB, C-terminal domain Nucleotide cyclase 11
Ribosomal protein L6 Ribosomal protein L6 11
Flagellar hook protein flgE Flagellar hook protein flgE 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
Tex N-terminal region-like Ribonuclease H-like 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11
Fe-S cluster assembly (FSCA) domain-like P-loop containing nucleoside triphosphate hydrolases 11
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 11
Chaperone J-domain HSP40/DnaJ peptide-binding domain 11
S13-like H2TH domain Glucocorticoid receptor-like (DNA-binding domain) 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 11
Nucleotidylyl transferase Ribosomal protein L25-like 11
Nucleic acid-binding proteins Prokaryotic type KH domain (KH-domain type II) 11
N-terminal domain of MutM-like DNA repair proteins Glucocorticoid receptor-like (DNA-binding domain) 11
Glutamyl tRNA-reductase catalytic, N-terminal domain Glutamyl tRNA-reductase dimerization domain 11
S-adenosyl-L-methionine-dependent methyltransferases NAD(P)-binding Rossmann-fold domains 11
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 11
TPR-like NTF2-like 11
Cytidine deaminase-like Dihydrofolate reductase-like 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 11
Nucleic acid-binding proteins ArfGap/RecO-like zinc finger 11
Lysozyme-like beta-lactamase/transpeptidase-like 11
Putative DNA-binding domain Translation proteins 11
Dihydropteroate synthetase-like Cobalamin (vitamin B12)-binding domain 11
PreATP-grasp domain PreATP-grasp domain 11
Chorismate mutase II Periplasmic binding protein-like II 11
Pentapeptide repeat-like Pentapeptide repeat-like 11
GAF domain-like Hemerythrin-like 11
Translation proteins ThrRS/AlaRS common domain 11
Cobalamin (vitamin B12)-binding domain UROD/MetE-like 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
Hemerythrin-like Homodimeric domain of signal transducing histidine kinase 11
Nqo5-like HydB/Nqo4-like 11
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 11
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 11
NAD(P)-binding Rossmann-fold domains Isocitrate/Isopropylmalate dehydrogenase-like 11
YrdC/RibB RibA-like 11
P-loop containing nucleoside triphosphate hydrolases Smc hinge domain 11
6-phosphogluconate dehydrogenase C-terminal domain-like ClpP/crotonase 11
Class II aaRS and biotin synthetases YbaK/ProRS associated domain 11
HAMP domain-like GAF domain-like 11
L,D-transpeptidase catalytic domain-like NTF2-like 11
Globin-like EAL domain-like 11
2Fe-2S ferredoxin-like alpha-helical ferredoxin 11
Dihydropteroate synthetase-like Methionine synthase domain 11
LysM domain Duplicated hybrid motif 11
Nucleotide-binding domain Nucleotide-binding domain 11
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 11
Nucleotidyltransferase substrate binding subunit/domain ACT-like 11
P-loop containing nucleoside triphosphate hydrolases C-terminal UvrC-binding domain of UvrB 11
Carbamate kinase-like PUA domain-like 11
Nucleotidyltransferase substrate binding subunit/domain HD-domain/PDEase-like 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
PUA domain-like alpha/beta knot 11
RuvA domain 2-like MCP/YpsA-like 11
Adenine nucleotide alpha hydrolases-like MesJ substrate recognition domain-like 11
Class II aaRS and biotin synthetases Translation proteins 11
RuvA domain 2-like BRCT domain 11
PurM C-terminal domain-like Class I glutamine amidotransferase-like 11
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 11
Nucleic acid-binding proteins DNA helicase RuvA subunit, C-terminal domain 11
FAD/NAD(P)-binding domain 4Fe-4S ferredoxins 11
FAD-binding/transporter-associated domain-like Glutathione synthetase ATP-binding domain-like 11
HD-domain/PDEase-like Hemerythrin-like 11
TGS-like ACT-like 11
Glutamine synthetase/guanido kinase GatB/YqeY motif 11
Putative DNA-binding domain Anticodon-binding domain of PheRS 11
Sec-C motif P-loop containing nucleoside triphosphate hydrolases 11
Nitrite/Sulfite reductase N-terminal domain-like Nitrite/Sulfite reductase N-terminal domain-like 11
FMN-linked oxidoreductases Alpha subunit of glutamate synthase, C-terminal domain 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 11
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 11
Protein kinase-like (PK-like) Protein kinase-like (PK-like) 11
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 11
Class II aaRS and biotin synthetases C-terminal domain of transcriptional repressors 11
alpha-helical ferredoxin 4Fe-4S ferredoxins 11
P-loop containing nucleoside triphosphate hydrolases TGS-like 11
Cryptochrome/photolyase, N-terminal domain Cryptochrome/photolyase FAD-binding domain 11
(Trans)glycosidases Glycosyl hydrolase domain 11
4Fe-4S ferredoxins Formate dehydrogenase/DMSO reductase, domains 1-3 11
NAD(P)-binding Rossmann-fold domains Acyl-CoA N-acyltransferases (Nat) 11
PPK N-terminal domain-like PHP14-like 11
Formate/glycerate dehydrogenase catalytic domain-like ACT-like 11
FliG FliG 11
MgtE N-terminal domain-like CorA soluble domain-like 11
GroEL equatorial domain-like GroEL apical domain-like 11
Nucleic acid-binding proteins PheT/TilS domain 11
Leukotriene A4 hydrolase N-terminal domain Metalloproteases ("zincins"), catalytic domain 11
Ribonuclease H-like P-loop containing nucleoside triphosphate hydrolases 11
Cadherin-like Cadherin-like 11
FAD-binding/transporter-associated domain-like alpha-helical ferredoxin 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 11
Putative DNA-binding domain Initiation factor IF2/eIF5b, domain 3 11
FMN-binding split barrel UbiD C-terminal domain-like 11
Prokaryotic type KH domain (KH-domain type II) Rad51 N-terminal domain-like 11
Sensory domain-like Histidine-containing phosphotransfer domain, HPT domain 11
Methionine synthase domain Cobalamin (vitamin B12)-binding domain 11
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain Glutathione synthetase ATP-binding domain-like 11

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