SUPERFAMILY 1.75 HMM library and genome assignments server

Domain combination pairs in Aromatoleum aromaticum EbN1

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

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Adjacent domain pairs graph

Graph of adjacent domain pairs.


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Domain combination pairs

697 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 3415
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 2817
CheY-like C-terminal effector domain of the bipartite response regulators 221
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 206
PYP-like sensor domain (PAS domain) PYP-like sensor domain (PAS domain) 2015
Nucleotide cyclase EAL domain-like 1914
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 1915
Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase C-terminal domain-like 182
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 187
PYP-like sensor domain (PAS domain) Nucleotide cyclase 1713
Actin-like ATPase domain Actin-like ATPase domain 165
"Winged helix" DNA-binding domain Periplasmic binding protein-like II 161
Thiolase-like Thiolase-like 161
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 1512
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 145
PYP-like sensor domain (PAS domain) EAL domain-like 139
Formate dehydrogenase/DMSO reductase, domains 1-3 ADC-like 135
CheY-like P-loop containing nucleoside triphosphate hydrolases 125
GroES-like NAD(P)-binding Rossmann-fold domains 112
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 106
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 105
CheY-like Homeodomain-like 103
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 104
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 93
P-loop containing nucleoside triphosphate hydrolases Translation proteins 95
Thioredoxin-like GST C-terminal domain-like 91
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheY-like 99
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 94
Homeodomain-like Tetracyclin repressor-like, C-terminal domain 93
Cytochrome c Cytochrome c 84
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 84
HAMP domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 86
FMN-binding split barrel UbiD C-terminal domain-like 83
cAMP-binding domain-like "Winged helix" DNA-binding domain 71
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 73
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 72
PreATP-grasp domain Rudiment single hybrid motif 72
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 73
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 73
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 63
EspE N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 64
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 64
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 64
Homodimeric domain of signal transducing histidine kinase CheY-like 66
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 64
EAL domain-like CheY-like 65
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB transmembrane domain 64
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 64
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein S5 domain 2-like 65
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 63
HAMP domain-like PYP-like sensor domain (PAS domain) 65
Triger factor/SurA peptide-binding domain-like FKBP-like 65
"Winged helix" DNA-binding domain GAF domain-like 61
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 65
PYP-like sensor domain (PAS domain) CheY-like 66
Calcium ATPase, transduction domain A HAD-like 65
HAMP domain-like Homodimeric domain of signal transducing histidine kinase 64
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 64
GAF domain-like EAL domain-like 66
GAF domain-like Nucleotide cyclase 66
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB transmembrane domain 64
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 53
Phospholipase D/nuclease Phospholipase D/nuclease 54
Succinyl-CoA synthetase domains Glutathione synthetase ATP-binding domain-like 53
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 51
GAF domain-like PYP-like sensor domain (PAS domain) 55
"Winged helix" DNA-binding domain GntR ligand-binding domain-like 51
Calcium ATPase, transmembrane domain M HAD-like 54
Translation proteins EF-G C-terminal domain-like 53
ParB/Sulfiredoxin KorB DNA-binding domain-like 53
NAD(P)-binding Rossmann-fold domains TrkA C-terminal domain-like 54
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Adenine nucleotide alpha hydrolases-like 51
ACT-like ACT-like 54
Alpha-L RNA-binding motif Pseudouridine synthase 51
Succinyl-CoA synthetase domains Succinyl-CoA synthetase domains 53
Composite domain of metallo-dependent hydrolases Metallo-dependent hydrolases 52
Nucleotide cyclase CheY-like 54
6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 53
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 54
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 43
NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains 43
P-loop containing nucleoside triphosphate hydrolases MOP-like 41
EF-G C-terminal domain-like EF-G C-terminal domain-like 42
NAD(P)-binding Rossmann-fold domains Glutathione synthetase ATP-binding domain-like 42
PurM N-terminal domain-like PurM C-terminal domain-like 42
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 42
6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 41
(Trans)glycosidases Glycosyl hydrolase domain 44
GAF domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 44
GAF domain-like CheY-like 44
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 44
ClpP/crotonase ClpP/crotonase 42
NAD(P)-binding Rossmann-fold domains UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 41
DsbC/DsbG N-terminal domain-like Thioredoxin-like 42
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 32
MurCD N-terminal domain MurD-like peptide ligases, peptide-binding domain 31
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 31
Trypsin-like serine proteases PDZ domain-like 33
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 32
P-loop containing nucleoside triphosphate hydrolases Restriction endonuclease-like 33
CBS-domain pair FAD-binding/transporter-associated domain-like 31
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 32
HAMP domain-like EAL domain-like 33
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 33
Single hybrid motif Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 32
HAMP domain-like Nucleotide cyclase 33
2Fe-2S ferredoxin-like Ferredoxin reductase-like, C-terminal NADP-linked domain 32
PDZ domain-like PDZ domain-like 33
HD-domain/PDEase-like Nucleotidyltransferase 32
TPR-like TPR-like 32
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 32
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 33
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 33
2Fe-2S ferredoxin-like 4Fe-4S ferredoxins 33
HD-domain/PDEase-like ACT-like 32
Pyruvate-ferredoxin oxidoreductase, PFOR, domain III Thiamin diphosphate-binding fold (THDP-binding) 31
6-phosphogluconate dehydrogenase C-terminal domain-like ClpP/crotonase 33
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 32
HMA, heavy metal-associated domain HAD-like 33
Enolase N-terminal domain-like Enolase C-terminal domain-like 31
MurCD N-terminal domain MurD-like peptide ligases, catalytic domain 31
Single hybrid motif CoA-dependent acyltransferases 32
HAMP domain-like CheY-like 33
NAD(P)-binding Rossmann-fold domains ClpP/crotonase 33
Aconitase iron-sulfur domain LeuD/IlvD-like 33
Nucleotidyltransferase ACT-like 32
PRC-barrel domain PRC-barrel domain 31
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 32
Pyruvate-ferredoxin oxidoreductase, PFOR, domain III TK C-terminal domain-like 31
FMN-linked oxidoreductases FAD/NAD(P)-binding domain 33
HAMP domain-like GAF domain-like 33
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex CoA-dependent acyltransferases 32
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 33
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 31
Nucleic acid-binding proteins Nucleic acid-binding proteins 33
Sm-like ribonucleoproteins Mechanosensitive channel protein MscS (YggB), C-terminal domain 33
Chaperone J-domain HSP40/DnaJ peptide-binding domain 32
PLP-binding barrel Alanine racemase C-terminal domain-like 32
Nucleic acid-binding proteins RuvA domain 2-like 33
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 33
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 31
E set domains (Trans)glycosidases 33
alpha-helical ferredoxin Nucleotide-binding domain 33
2Fe-2S ferredoxin-like Riboflavin synthase domain-like 32
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 33
Class II aaRS and biotin synthetases Class II aaRS ABD-related 33
2Fe-2S ferredoxin-like alpha-helical ferredoxin 32
Metal cation-transporting ATPase, ATP-binding domain N HAD-like 21
CheY-like Histidine-containing phosphotransfer domain, HPT domain 22
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 21
E set domains Glycosyl hydrolase domain 22
NagB/RpiA/CoA transferase-like alpha-helical ferredoxin 21
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 22
N-terminal domain of DnaB helicase P-loop containing nucleoside triphosphate hydrolases 21
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
MoeA N-terminal region -like Molybdenum cofactor biosynthesis proteins 21
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 21
Rudiment single hybrid motif Single hybrid motif 21
DNA methylase specificity domain DNA methylase specificity domain 21
Nqo1 FMN-binding domain-like Nqo1C-terminal domain-like 22
Aminoacid dehydrogenase-like, N-terminal domain Isocitrate/Isopropylmalate dehydrogenase-like 21
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 22
FAD/NAD(P)-binding domain HI0933 insert domain-like 21
Penicillin binding protein dimerisation domain beta-lactamase/transpeptidase-like 21
HD-domain/PDEase-like TGS-like 21
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 22
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Histidine-containing phosphotransfer domain, HPT domain 22
TGS-like ACT-like 21
SMAD/FHA domain SMAD/FHA domain 22
Cytochrome c E set domains 21
Methylated DNA-protein cysteine methyltransferase domain Methylated DNA-protein cysteine methyltransferase, C-terminal domain 21
Calcium ATPase, transduction domain A Metal cation-transporting ATPase, ATP-binding domain N 21
FAD/NAD(P)-binding domain 4Fe-4S ferredoxins 21
Ribonuclease H-like GIY-YIG endonuclease 21
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 22
Molybdenum cofactor biosynthesis proteins MoeA C-terminal domain-like 21
Chemotaxis receptor methyltransferase CheR, N-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 22
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 22
Cobalamin (vitamin B12)-binding domain Cobalamin (vitamin B12)-dependent enzymes 22
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 21
EF-G C-terminal domain-like Ribosomal protein S5 domain 2-like 21
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 21
4Fe-4S ferredoxins Formate dehydrogenase/DMSO reductase, domains 1-3 22
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 21
Nucleic acid-binding proteins Translation proteins SH3-like domain 22
MoeA N-terminal region -like MoeA C-terminal domain-like 21
Thiamin diphosphate-binding fold (THDP-binding) 4Fe-4S ferredoxins 22
E set domains E set domains 21
Quinohemoprotein amine dehydrogenase A chain, domain 3 E set domains 21
Nucleotide-binding domain Nucleotide-binding domain 22
UDP-Glycosyltransferase/glycogen phosphorylase Nucleotide-diphospho-sugar transferases 21
Nqo1 FMN-binding domain-like Nqo1 middle domain-like 22
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
Folate-binding domain Aminomethyltransferase beta-barrel domain 21
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 21
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
L30e-like alpha/beta knot 21
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 22
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 21
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 21
"Winged helix" DNA-binding domain PLP-dependent transferases 21
NAD(P)-binding Rossmann-fold domains Isocitrate/Isopropylmalate dehydrogenase-like 21
2Fe-2S ferredoxin-like Formate dehydrogenase/DMSO reductase, domains 1-3 22
4Fe-4S ferredoxins Nucleotide-binding domain 22
2Fe-2S ferredoxin-like CO dehydrogenase ISP C-domain like 21
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 21
NAD(P)-binding Rossmann-fold domains ACT-like 22
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 21
Nqo1 middle domain-like Nqo1C-terminal domain-like 22
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 22
Aldolase post-HMGL domain-like 21
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 21
GAF domain-like HD-domain/PDEase-like 22
CheY-like CheY-like 22
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 22
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 21
Zinc beta-ribbon DNA primase core 22
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 22
Class II aaRS and biotin synthetases ThrRS/AlaRS common domain 22
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 21
Nucleotide cyclase SMAD/FHA domain 21
Cytochrome c C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase 22
Translation proteins Ribosomal protein S5 domain 2-like 21
GreA transcript cleavage protein, N-terminal domain FKBP-like 21
FAD-binding/transporter-associated domain-like CO dehydrogenase flavoprotein C-terminal domain-like 21
Metal cation-transporting ATPase, ATP-binding domain N Calcium ATPase, transmembrane domain M 21
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 22
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 21
Nucleotidyltransferase TGS-like 21
CO dehydrogenase molybdoprotein N-domain-like Molybdenum cofactor-binding domain 21
lambda repressor-like DNA-binding domains P-loop containing nucleoside triphosphate hydrolases 21
Nqo1 FMN-binding domain-like alpha-helical ferredoxin 22
Restriction endonuclease-like Zinc beta-ribbon 22
Nucleotidyltransferase Nucleotidyltransferase substrate binding subunit/domain 22
FAD-linked reductases, C-terminal domain 4Fe-4S ferredoxins 21
Glutathione synthetase ATP-binding domain-like Acyl-CoA N-acyltransferases (Nat) 22
Ligand-binding domain in the NO signalling and Golgi transport P-loop containing nucleoside triphosphate hydrolases 22
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 22
Lysozyme-like beta-lactamase/transpeptidase-like 22
Glutathione synthetase ATP-binding domain-like Single hybrid motif 21
PreATP-grasp domain Single hybrid motif 21
TTHA1013/TTHA0281-like Ribbon-helix-helix 21
tRNA-binding arm Class II aaRS and biotin synthetases 21
Ligand-binding domain in the NO signalling and Golgi transport Homeodomain-like 22
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 21
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 22
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 21
Cytochrome c Quinohemoprotein amine dehydrogenase A chain, domain 3 21
Aldehyde ferredoxin oxidoreductase, N-terminal domain Aldehyde ferredoxin oxidoreductase, C-terminal domains 22
Nucleotidyltransferase Poly A polymerase C-terminal region-like 22
Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), C-terminal domain 22
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 21
PYP-like sensor domain (PAS domain) Histidine-containing phosphotransfer domain, HPT domain 11
Nucleic acid-binding proteins BRCT domain 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
Hsp33 domain HSP33 redox switch-like 11
Tropomyosin Duplicated hybrid motif 11
Globin-like EAL domain-like 11
Homocysteine S-methyltransferase Methionine synthase domain 11
DNA clamp DNA clamp 11
Putative DNA-binding domain Anticodon-binding domain of PheRS 11
NE0471 N-terminal domain-like lambda repressor-like DNA-binding domains 11
Formate/glycerate dehydrogenase catalytic domain-like ACT-like 11
Aconitase B, N-terminal domain Aconitase iron-sulfur domain 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
cAMP-binding domain-like cAMP-binding domain-like 11
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 11
PurS-like Class I glutamine amidotransferase-like 11
FGAM synthase PurL, linker domain PurM C-terminal domain-like 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Nucleic acid-binding proteins 11
CarD-like TRCF domain-like 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
Rho N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
Single hybrid motif FAD/NAD(P)-binding domain 11
Nucleic acid-binding proteins DNA helicase RuvA subunit, C-terminal domain 11
Homeodomain-like Homeodomain-like 11
PHP14-like Phospholipase D/nuclease 11
Carbon-nitrogen hydrolase Adenine nucleotide alpha hydrolases-like 11
NAD(P)-binding Rossmann-fold domains Acyl-CoA N-acyltransferases (Nat) 11
Transcription factor NusA, N-terminal domain Prokaryotic type KH domain (KH-domain type II) 11
TolB, N-terminal domain Tricorn protease N-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases TGS-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
Nucleic acid-binding proteins Prokaryotic type KH domain (KH-domain type II) 11
NAD(P)-binding Rossmann-fold domains Glutamyl tRNA-reductase dimerization domain 11
Molybdenum cofactor biosynthesis proteins Nucleotide-diphospho-sugar transferases 11
5' to 3' exonuclease, C-terminal subdomain DNA/RNA polymerases 11
Nucleotidylyl transferase Riboflavin kinase-like 11
Bacterial muramidases Lysozyme-like 11
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
Aldehyde ferredoxin oxidoreductase, C-terminal domains MoaD/ThiS 11
Homocysteine S-methyltransferase Methionine synthase activation domain-like 11
Glutamyl tRNA-reductase catalytic, N-terminal domain NAD(P)-binding Rossmann-fold domains 11
Adenine nucleotide alpha hydrolases-like Adenine nucleotide alpha hydrolases-like 11
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 11
Homocysteine S-methyltransferase Cobalamin (vitamin B12)-binding domain 11
PheT/TilS domain Class II aaRS and biotin synthetases 11
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 11
Cytochrome c Quinoprotein alcohol dehydrogenase-like 11
Nucleotide-binding domain FAD/NAD(P)-binding domain 11
PLP-dependent transferases Ornithine decarboxylase C-terminal domain 11
Acetyl-CoA synthetase-like Glycerol-3-phosphate (1)-acyltransferase 11
RelE-like P-loop containing nucleoside triphosphate hydrolases 11
Nucleic acid-binding proteins PheT/TilS domain 11
Cadherin-like Cadherin-like 11
Adenine nucleotide alpha hydrolases-like DHS-like NAD/FAD-binding domain 11
Periplasmic binding protein-like II Nucleotide cyclase 11
ISP domain Bet v1-like 11
Carbamate kinase-like Acyl-CoA N-acyltransferases (Nat) 11
FMN-linked oxidoreductases Alpha subunit of glutamate synthase, C-terminal domain 11
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 11
cAMP-binding domain-like Actin-like ATPase domain 11
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 11
Rho N-terminal domain-like Nucleic acid-binding proteins 11
4Fe-4S ferredoxins Radical SAM enzymes 11
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Cytochrome c oxidase subunit I-like Cytochrome c oxidase subunit III-like 11
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
Periplasmic binding protein-like II Homodimeric domain of signal transducing histidine kinase 11
4Fe-4S ferredoxins Ferredoxin reductase-like, C-terminal NADP-linked domain 11
PUA domain-like alpha/beta knot 11
lambda integrase-like, N-terminal domain DNA breaking-rejoining enzymes 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
PurS-like FGAM synthase PurL, linker domain 11
Methionine synthase domain Methionine synthase activation domain-like 11
P-loop containing nucleoside triphosphate hydrolases Hypothetical protein YjiA, C-terminal domain 11
Elongation factor Ts (EF-Ts), dimerisation domain Elongation factor Ts (EF-Ts), dimerisation domain 11
Nucleic acid-binding proteins ArfGap/RecO-like zinc finger 11
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 11
Dihydropteroate synthetase-like Methionine synthase domain 11
Succinyl-CoA synthetase domains Acyl-CoA N-acyltransferases (Nat) 11
RuvA domain 2-like DNA helicase RuvA subunit, C-terminal domain 11
Periplasmic binding protein-like II PYP-like sensor domain (PAS domain) 11
Epsilon subunit of F1F0-ATP synthase N-terminal domain Epsilon subunit of F1F0-ATP synthase C-terminal domain 11
Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha) Thioredoxin-like 11
Lysozyme-like LysM domain 11
Carbamate kinase-like PUA domain-like 11
PheT/TilS domain Putative DNA-binding domain 11
FMN-linked oxidoreductases Nucleotide-binding domain 11
P-loop containing nucleoside triphosphate hydrolases CarD-like 11
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
Thioredoxin-like Nqo1C-terminal domain-like 11
Globin-like PYP-like sensor domain (PAS domain) 11
Flavoproteins Rubredoxin-like 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
4Fe-4S ferredoxins ADC-like 11
Rhodanese/Cell cycle control phosphatase Rhodanese/Cell cycle control phosphatase 11
Herpes virus serine proteinase, assemblin Major capsid protein gp5 11
Macro domain-like Zn-dependent exopeptidases 11
Single hybrid motif Single hybrid motif 11
Chorismate mutase II ACT-like 11
Methylglyoxal synthase-like Cytidine deaminase-like 11
HprK N-terminal domain-like PEP carboxykinase-like 11
FAD-linked oxidases, C-terminal domain alpha-helical ferredoxin 11
Aminopeptidase/glucanase lid domain Zn-dependent exopeptidases 11
SMAD/FHA domain GAF domain-like 11
DNA-glycosylase Nudix 11
Metallo-hydrolase/oxidoreductase Rubredoxin-like 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
Homocysteine S-methyltransferase Dihydropteroate synthetase-like 11
RuvA domain 2-like JAB1/MPN domain 11
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 11
Globin-like Nucleotide cyclase 11
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 11
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
Protein kinase-like (PK-like) cAMP-binding domain-like 11
ADC synthase D-aminoacid aminotransferase-like PLP-dependent enzymes 11
Nqo5-like HydB/Nqo4-like 11
PIN domain-like P-loop containing nucleoside triphosphate hydrolases 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase HSP90 C-terminal domain 11
PUA domain-like S-adenosyl-L-methionine-dependent methyltransferases 11
Flavoproteins FAD/NAD(P)-binding domain 11
FAD-binding/transporter-associated domain-like alpha-helical ferredoxin 11
Adenine nucleotide alpha hydrolases-like MesJ substrate recognition domain-like 11
P-loop containing nucleoside triphosphate hydrolases C-terminal effector domain of the bipartite response regulators 11
Tex N-terminal region-like Nucleic acid-binding proteins 11
Zinc beta-ribbon DNA primase DnaG, C-terminal domain 11
Methylesterase CheB, C-terminal domain Chemotaxis receptor methyltransferase CheR, N-terminal domain 11
Chorismate mutase II Periplasmic binding protein-like II 11
CBS-domain pair Nucleotide cyclase 11
Carbamate kinase-like ACT-like 11
Metallo-hydrolase/oxidoreductase Flavoproteins 11
Ferritin-like Calcium ATPase, transduction domain A 11
FKBP-like FKBP-like 11
RuvA domain 2-like BRCT domain 11
ACT-like Formyltransferase 11
Methylesterase CheB, C-terminal domain Tropomyosin 11
Zinc beta-ribbon Prokaryotic SH3-related domain 11
Nucleotidyltransferase substrate binding subunit/domain ACT-like 11
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
(Trans)glycosidases (Trans)glycosidases 11
Actin-like ATPase domain HD-domain/PDEase-like 11
Eukaryotic type KH-domain (KH-domain type I) Nucleic acid-binding proteins 11
TrkA C-terminal domain-like TrkA C-terminal domain-like 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
Pili subunits GspK insert domain-like 11
Dihydropteroate synthetase-like Methionine synthase activation domain-like 11
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 11
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 11
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 11
Nucleotidyltransferase substrate binding subunit/domain Nucleotidyltransferase substrate binding subunit/domain 11
(Trans)glycosidases Protein kinase-like (PK-like) 11
Lysozyme-like PGBD-like 11
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 11
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 11
Chaperone J-domain HSC20 (HSCB), C-terminal oligomerisation domain 11
PYP-like sensor domain (PAS domain) P-loop containing nucleoside triphosphate hydrolases 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain ACT-like 11
YgfB-like Sec-C motif 11
HAD-like UDP-Glycosyltransferase/glycogen phosphorylase 11
PK beta-barrel domain-like PK C-terminal domain-like 11
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 11
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 11
Pseudouridine synthase PUA domain-like 11
Sensory domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
S-adenosyl-L-methionine-dependent methyltransferases PYP-like sensor domain (PAS domain) 11
Staphylococcal nuclease Ada DNA repair protein, N-terminal domain (N-Ada 10) 11
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheW-like 11
TGS-like ThrRS/AlaRS common domain 11
Prokaryotic type KH domain (KH-domain type II) Prokaryotic type KH domain (KH-domain type II) 11
Glycosyl hydrolase domain Protein kinase-like (PK-like) 11
Cobalamin (vitamin B12)-binding domain P-loop containing nucleoside triphosphate hydrolases 11
Ribonuclease H-like RuvA domain 2-like 11
Transcription factor NusA, N-terminal domain Rad51 N-terminal domain-like 11
MesJ substrate recognition domain-like PheT/TilS domain 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 11
CBS-domain pair MgtE membrane domain-like 11
Glutamyl tRNA-reductase catalytic, N-terminal domain Glutamyl tRNA-reductase dimerization domain 11
Sec-C motif MM3350-like 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
P-loop containing nucleoside triphosphate hydrolases TrpR-like 11
4Fe-4S ferredoxins 4Fe-4S ferredoxins 11
alpha/beta-Hydrolases alpha/beta-Hydrolases 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
(Trans)glycosidases Nucleotide-diphospho-sugar transferases 11
Thioredoxin-like Nqo1 middle domain-like 11
CBS-domain pair Nucleotidyltransferase 11
PUA domain-like Ribosomal protein S5 domain 2-like 11
Ligand-binding domain in the NO signalling and Golgi transport PYP-like sensor domain (PAS domain) 11
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 11
MetI-like MetI-like 11
RNase III domain-like dsRNA-binding domain-like 11
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 11
Nitrous oxide reductase, N-terminal domain Cupredoxins 11
beta-lactamase/transpeptidase-like Penicillin-binding protein associated domain 11
FGAM synthase PurL, linker domain Class I glutamine amidotransferase-like 11
HD-domain/PDEase-like HD-domain/PDEase-like 11
Translation proteins PRC-barrel domain 11
PP2C-like Protein kinase-like (PK-like) 11
GroEL-intermediate domain like GroEL apical domain-like 11
Nucleic acid-binding proteins Rad51 N-terminal domain-like 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleotidylyl transferase 11
Riboflavin synthase domain-like Riboflavin synthase domain-like 11
Single hybrid motif FAD/NAD-linked reductases, dimerisation (C-terminal) domain 11
S-adenosylmethionine decarboxylase S-adenosyl-L-methionine-dependent methyltransferases 11
TGS-like Class II aaRS ABD-related 11
DNA topoisomerase I domain DNA breaking-rejoining enzymes 11
MgtE N-terminal domain-like MgtE membrane domain-like 11
Trigger factor ribosome-binding domain FKBP-like 11
Tropomyosin PYP-like sensor domain (PAS domain) 11
Ligand-binding domain in the NO signalling and Golgi transport ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
YajQ-like YajQ-like 11
RuvA domain 2-like RuvA domain 2-like 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphoenolpyruvate/pyruvate domain 11
N-terminal domain of bifunctional PutA protein ALDH-like 11
"Winged helix" DNA-binding domain LexA/Signal peptidase 11
Sensory domain-like Homodimeric domain of signal transducing histidine kinase 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
Transmembrane di-heme cytochromes a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 11
HlyD-like secretion proteins HlyD-like secretion proteins 11
Nucleic acid-binding proteins S-adenosyl-L-methionine-dependent methyltransferases 11
"Winged helix" DNA-binding domain Nucleotidyltransferase 11
GAF domain-like EspE N-terminal domain-like 11
TrmE connector domain P-loop containing nucleoside triphosphate hydrolases 11
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 11
FAD-binding/transporter-associated domain-like Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain 11
N-terminal domain of MutM-like DNA repair proteins Glucocorticoid receptor-like (DNA-binding domain) 11
Chemotaxis receptor methyltransferase CheR, N-terminal domain PYP-like sensor domain (PAS domain) 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FMN-linked oxidoreductases 11
Class II aaRS and biotin synthetases YbaK/ProRS associated domain 11
Homo-oligomeric flavin-containing Cys decarboxylases, HFCD CoaB-like 11
ClpP/crotonase NfeD domain-like 11
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 11
Glutathione synthetase ATP-binding domain-like Phosphoenolpyruvate/pyruvate domain 11
Transcription factor NusA, N-terminal domain Nucleic acid-binding proteins 11
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 11
Prokaryotic type I DNA topoisomerase Zinc beta-ribbon 11
Cytidine deaminase-like Dihydrofolate reductase-like 11
Ferritin-like Calcium ATPase, transmembrane domain M 11
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 11
Histidine-containing phosphotransfer domain, HPT domain Histidine-containing phosphotransfer domain, HPT domain 11
S-adenosyl-L-methionine-dependent methyltransferases P-loop containing nucleoside triphosphate hydrolases 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
Methionine synthase domain Cobalamin (vitamin B12)-binding domain 11
MgtE N-terminal domain-like CBS-domain pair 11
YrdC/RibB RibA-like 11
Dihydropteroate synthetase-like Cobalamin (vitamin B12)-binding domain 11
Aconitase B, N-terminal domain LeuD/IlvD-like 11
Ribosomal protein L6 Ribosomal protein L6 11
C-terminal UvrC-binding domain of UvrB RuvA domain 2-like 11
PR-1-like beta-Roll 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 11
GroEL equatorial domain-like GroEL-intermediate domain like 11
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 11
HD-domain/PDEase-like P-loop containing nucleoside triphosphate hydrolases 11
P-loop containing nucleoside triphosphate hydrolases C-terminal UvrC-binding domain of UvrB 11
HCP-like Lysozyme-like 11
Cobalamin (vitamin B12)-binding domain Methionine synthase activation domain-like 11
ABC transporter transmembrane region ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Glucocorticoid receptor-like (DNA-binding domain) P-loop containing nucleoside triphosphate hydrolases 11
"Winged helix" DNA-binding domain Fic-like 11
NAD(P)-binding Rossmann-fold domains RmlC-like cupins 11
Ribosomal protein S5 domain 2-like HSP90 C-terminal domain 11
S13-like H2TH domain Glucocorticoid receptor-like (DNA-binding domain) 11
PEP carboxykinase N-terminal domain PEP carboxykinase-like 11
PYP-like sensor domain (PAS domain) Homeodomain-like 11
TGS-like Class II aaRS and biotin synthetases 11
cAMP-binding domain-like CBS-domain pair 11
Leukotriene A4 hydrolase N-terminal domain Metalloproteases ("zincins"), catalytic domain 11
cAMP-binding domain-like ABC transporter transmembrane region 11
PurS-like PurM N-terminal domain-like 11
CheW-like CheY-like 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 11
Prokaryotic type KH domain (KH-domain type II) Rad51 N-terminal domain-like 11
FGAM synthase PurL, linker domain PurM N-terminal domain-like 11
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 11
Ligand-binding domain in the NO signalling and Golgi transport Homodimeric domain of signal transducing histidine kinase 11
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 11
5' to 3' exonuclease, C-terminal subdomain Ribonuclease H-like 11
Ferritin-like Ferritin-like 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
Nucleotidyltransferase Nucleotidyltransferase 11
Voltage-gated potassium channels NAD(P)-binding Rossmann-fold domains 11
HMA, heavy metal-associated domain HMA, heavy metal-associated domain 11
PIN domain-like Ribonuclease H-like 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
Nudix Thiamin phosphate synthase 11
Thioesterase/thiol ester dehydrase-isomerase Thioesterase/thiol ester dehydrase-isomerase 11
Tryptophan synthase beta subunit-like PLP-dependent enzymes ACT-like 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 11
Rubredoxin-like FAD/NAD(P)-binding domain 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
RBP11-like subunits of RNA polymerase C-terminal domain of RNA polymerase alpha subunit 11
Rad51 N-terminal domain-like Rad51 N-terminal domain-like 11
Aspartate/glutamate racemase Aspartate/glutamate racemase 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
Voltage-gated potassium channels TrkA C-terminal domain-like 11
Putative DNA-binding domain Initiation factor IF2/eIF5b, domain 3 11
GIY-YIG endonuclease RuvA domain 2-like 11
2Fe-2S ferredoxin-like Nucleotide-binding domain 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
Carboxypeptidase regulatory domain-like beta-Roll 11
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 11
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 11
Nucleotidylyl transferase Ribosomal protein L25-like 11
GAF domain-like GAF domain-like 11
Homodimeric domain of signal transducing histidine kinase Histidine-containing phosphotransfer domain, HPT domain 11
L9 N-domain-like Ribosomal protein L9 C-domain 11
Translation proteins ThrRS/AlaRS common domain 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleic acid-binding proteins 11
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 11
PPK N-terminal domain-like PHP14-like 11
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 11
PurM C-terminal domain-like Class I glutamine amidotransferase-like 11
"Winged helix" DNA-binding domain Dimeric alpha+beta barrel 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
Putative DNA-binding domain Translation proteins 11
PreATP-grasp domain Methylglyoxal synthase-like 11
PIN domain-like DNA/RNA polymerases 11
Nitrite/Sulfite reductase N-terminal domain-like Nitrite/Sulfite reductase N-terminal domain-like 11
Methylesterase CheB, C-terminal domain PYP-like sensor domain (PAS domain) 11
P-loop containing nucleoside triphosphate hydrolases TPR-like 11
GroES-like GroES-like 11
Formyltransferase FMT C-terminal domain-like 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases HRDC-like 11
DNA primase core DNA primase DnaG, C-terminal domain 11
YbaK/ProRS associated domain Class II aaRS ABD-related 11
FAD-linked oxidoreductase ALDH-like 11
Chemotaxis receptor methyltransferase CheR, N-terminal domain Tropomyosin 11
Pheromone-binding domain of LuxR-like quorum-sensing transcription factors C-terminal effector domain of the bipartite response regulators 11
Periplasmic binding protein-like II ACT-like 11
Nucleotide-diphospho-sugar transferases RmlC-like cupins 11
Nucleic acid-binding proteins GAD domain-like 11
cAMP-binding domain-like Nucleotidyltransferase 11
NagB/RpiA/CoA transferase-like D-ribose-5-phosphate isomerase (RpiA), lid domain 11
Class II aaRS and biotin synthetases C-terminal domain of transcriptional repressors 11
DNA/RNA polymerases Trypsin-like serine proteases 11
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 11
PurM N-terminal domain-like Class I glutamine amidotransferase-like 11
Radical SAM enzymes Radical SAM enzymes 11
FAD/NAD(P)-binding domain Nitrite and sulphite reductase 4Fe-4S domain-like 11
beta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphohistidine domain 11
Arginase/deacetylase PLP-dependent transferases 11
Nucleic acid-binding proteins Anticodon-binding domain of PheRS 11
FMN-dependent nitroreductase-like FMN-dependent nitroreductase-like 11
Metalloproteases ("zincins"), catalytic domain PDZ domain-like 11
"Winged helix" DNA-binding domain Chorismate lyase-like 11
Thioesterase/thiol ester dehydrase-isomerase Isocitrate/Isopropylmalate dehydrogenase-like 11
TPR-like C-terminal effector domain of the bipartite response regulators 11
Glutamine synthetase/guanido kinase GatB/YqeY motif 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 11
Nucleotidylyl transferase Nucleic acid-binding proteins 11
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 11
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 11
Flavoproteins Riboflavin synthase domain-like 11
ABC transporter transmembrane region CheY-like 11
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 11
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 11
Class II aaRS and biotin synthetases GAD domain-like 11
GAF domain-like P-loop containing nucleoside triphosphate hydrolases 11
cAMP-binding domain-like P-loop containing nucleoside triphosphate hydrolases 11
Translation proteins Initiation factor IF2/eIF5b, domain 3 11
YjeF N-terminal domain-like Ribokinase-like 11
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 11
DnaK suppressor protein DksA, alpha-hairpin domain Glucocorticoid receptor-like (DNA-binding domain) 11
2Fe-2S ferredoxin-like ADC-like 11
Class II aaRS and biotin synthetases Translation proteins 11
Histidine-containing phosphotransfer domain, HPT domain CheW-like 11
Acyl-CoA N-acyltransferases (Nat) Acyl-CoA N-acyltransferases (Nat) 11
PheT/TilS domain Anticodon-binding domain of PheRS 11
Nudix Nudix 11
Adenine nucleotide alpha hydrolases-like PheT/TilS domain 11
PDZ domain-like ClpP/crotonase 11
PGBD-like L,D-transpeptidase catalytic domain-like 11
N-terminal domain of bifunctional PutA protein FAD-linked oxidoreductase 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
PreATP-grasp domain PreATP-grasp domain 11
Fe-S cluster assembly (FSCA) domain-like P-loop containing nucleoside triphosphate hydrolases 11
Translation proteins Translation proteins 11
Tex N-terminal region-like RuvA domain 2-like 11
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 11
Ribonuclease H-like DNA/RNA polymerases 11
Metallo-hydrolase/oxidoreductase FAD/NAD(P)-binding domain 11
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 11
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 11
Barwin-like endoglucanases Sporulation related repeat 11
Ferritin-like HAD-like 11
PLP-dependent transferases PLP-dependent transferases 11
S-adenosyl-L-methionine-dependent methyltransferases DNA methylase specificity domain 11
Thioredoxin-like Nqo1 FMN-binding domain-like 11
EAL domain-like CBS-domain pair 11
Flavoproteins Ferredoxin reductase-like, C-terminal NADP-linked domain 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 11
4Fe-4S ferredoxins Riboflavin synthase domain-like 11
PR-1-like Carboxypeptidase regulatory domain-like 11
SMAD/FHA domain HD-domain/PDEase-like 11
EPT/RTPC-like P-loop containing nucleoside triphosphate hydrolases 11
Putative DNA-binding domain P-loop containing nucleoside triphosphate hydrolases 11
Chaperone J-domain NTF2-like 11
Ribonuclease H-like Nucleic acid-binding proteins 11
Periplasmic binding protein-like II ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Cytochrome c oxidase subunit II-like, transmembrane region Cupredoxins 11
Protein kinase-like (PK-like) Protein kinase-like (PK-like) 11
P-loop containing nucleoside triphosphate hydrolases ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
DNA ligase/mRNA capping enzyme, catalytic domain RuvA domain 2-like 11
Tex N-terminal region-like Ribonuclease H-like 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 11
GIY-YIG endonuclease C-terminal UvrC-binding domain of UvrB 11
Nucleotidylyl transferase tRNA-binding arm 11
Methylesterase CheB, C-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 11
S-adenosyl-L-methionine-dependent methyltransferases Tropomyosin 11
RmlC-like cupins Homeodomain-like 11
P-loop containing nucleoside triphosphate hydrolases Cobalamin (vitamin B12)-dependent enzymes 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Alpha subunit of glutamate synthase, C-terminal domain 11
Nucleotidyltransferase substrate binding subunit/domain HD-domain/PDEase-like 11
Nitrite and sulphite reductase 4Fe-4S domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
Aldehyde ferredoxin oxidoreductase, N-terminal domain MoaD/ThiS 11
4Fe-4S ferredoxins alpha-helical ferredoxin 11
GAF domain-like Homodimeric domain of signal transducing histidine kinase 11
Nucleic acid-binding proteins Putative DNA-binding domain 11
KorB DNA-binding domain-like C-terminal domain of transcriptional repressors 11
PurS-like PurM C-terminal domain-like 11
ParB/Sulfiredoxin C-terminal domain of transcriptional repressors 11
FAD/NAD(P)-binding domain Nitrite/Sulfite reductase N-terminal domain-like 11
alpha-helical ferredoxin alpha-helical ferredoxin 11
Cupredoxins Cytochrome c 11
PYP-like sensor domain (PAS domain) Ribonuclease H-like 11
PPK N-terminal domain-like Phospholipase D/nuclease 11
GroEL equatorial domain-like GroEL apical domain-like 11
YhbC-like, N-terminal domain YhbC-like, C-terminal domain 11

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