SUPERFAMILY 1.75 HMM library and genome assignments server

Domain combination pairs in Agrobacterium tumefaciens str. C58

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

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Adjacent domain pairs graph

Graph of adjacent domain pairs.


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Domain combination pairs

705 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
"Winged helix" DNA-binding domain Periplasmic binding protein-like II 731
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 6113
P-loop containing nucleoside triphosphate hydrolases MOP-like 461
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 3921
"Winged helix" DNA-binding domain GntR ligand-binding domain-like 352
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 305
GroES-like NAD(P)-binding Rossmann-fold domains 252
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 242
Homeodomain-like Tetracyclin repressor-like, C-terminal domain 242
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 235
CheY-like C-terminal effector domain of the bipartite response regulators 224
lambda repressor-like DNA-binding domains Periplasmic binding protein-like I 211
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 196
Homeodomain-like Homeodomain-like 185
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 1816
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 173
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 1614
Actin-like ATPase domain Actin-like ATPase domain 168
Metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 156
Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase C-terminal domain-like 143
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 143
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 142
PYP-like sensor domain (PAS domain) PYP-like sensor domain (PAS domain) 1411
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 131
HAMP domain-like Methyl-accepting chemotaxis protein (MCP) signaling domain 134
Thioredoxin-like GST C-terminal domain-like 131
"Winged helix" DNA-binding domain Dimeric alpha+beta barrel 131
Nucleotide cyclase EAL domain-like 127
Enolase N-terminal domain-like Enolase C-terminal domain-like 121
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 125
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 115
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheY-like 1110
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 104
Thiolase-like Thiolase-like 102
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 104
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB transmembrane domain 104
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB transmembrane domain 104
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 104
PYP-like sensor domain (PAS domain) CheY-like 99
"Winged helix" DNA-binding domain GAF domain-like 92
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 83
MetI-like MetI-like 82
P-loop containing nucleoside triphosphate hydrolases Translation proteins 86
PreATP-grasp domain Rudiment single hybrid motif 83
Homodimeric domain of signal transducing histidine kinase CheY-like 88
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 73
Class I glutamine amidotransferase-like Homeodomain-like 72
Regulatory protein AraC Homeodomain-like 73
(Trans)glycosidases Glycosyl hydrolase domain 75
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 73
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 73
"Winged helix" DNA-binding domain Actin-like ATPase domain 73
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 74
RmlC-like cupins Homeodomain-like 72
CheY-like CheY-like 76
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 62
"Winged helix" DNA-binding domain NagB/RpiA/CoA transferase-like 61
Acetyl-CoA synthetase-like ACP-like 66
PLP-binding barrel Alanine racemase C-terminal domain-like 61
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 63
Formate dehydrogenase/DMSO reductase, domains 1-3 ADC-like 63
cAMP-binding domain-like "Winged helix" DNA-binding domain 61
"Winged helix" DNA-binding domain Chorismate lyase-like 62
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 65
CheY-like P-loop containing nucleoside triphosphate hydrolases 62
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 61
Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), C-terminal domain 54
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 53
CoA-dependent acyltransferases CoA-dependent acyltransferases 55
Nucleotidyltransferase Nucleotidyltransferase substrate binding subunit/domain 53
Folate-binding domain Aminomethyltransferase beta-barrel domain 53
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 52
ParB/Sulfiredoxin KorB DNA-binding domain-like 52
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 54
Sm-like ribonucleoproteins Mechanosensitive channel protein MscS (YggB), C-terminal domain 54
Ribosomal protein S5 domain 2-like P-loop containing nucleoside triphosphate hydrolases 54
PYP-like sensor domain (PAS domain) Nucleotide cyclase 54
HAD-like Calcium ATPase, transmembrane domain M 53
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 53
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 54
Calcium ATPase, transduction domain A HAD-like 53
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 53
CheY-like Homeodomain-like 51
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 51
CoA-dependent acyltransferases ACP-like 55
P-loop containing nucleoside triphosphate hydrolases CBS-domain pair 51
FAD/NAD(P)-binding domain Folate-binding domain 42
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 42
PreATP-grasp domain Single hybrid motif 42
PGBD-like L,D-transpeptidase catalytic domain-like 43
HMA, heavy metal-associated domain HAD-like 42
PYP-like sensor domain (PAS domain) Methyl-accepting chemotaxis protein (MCP) signaling domain 41
Nucleic acid-binding proteins Nucleic acid-binding proteins 44
CoA-dependent acyltransferases Acetyl-CoA synthetase-like 44
PYP-like sensor domain (PAS domain) EAL domain-like 43
Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 42
Lysozyme-like beta-lactamase/transpeptidase-like 43
Rudiment single hybrid motif Single hybrid motif 42
P-loop containing nucleoside triphosphate hydrolases Hypothetical protein YjiA, C-terminal domain 41
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 44
MalF N-terminal region-like MetI-like 41
FAD/NAD(P)-binding domain Aminomethyltransferase beta-barrel domain 42
GAF domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 44
"Winged helix" DNA-binding domain PLP-dependent transferases 41
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 42
Pheromone-binding domain of LuxR-like quorum-sensing transcription factors C-terminal effector domain of the bipartite response regulators 41
Translation proteins EF-G C-terminal domain-like 43
Glutathione synthetase ATP-binding domain-like Single hybrid motif 42
ACT-like ACT-like 43
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 41
Homeodomain-like SIS domain 41
EF-G C-terminal domain-like EF-G C-terminal domain-like 43
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 43
Homeodomain-like Ribonuclease H-like 31
ACT-like Formyltransferase 31
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 32
Class II aaRS and biotin synthetases Class II aaRS ABD-related 33
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 33
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 32
Triger factor/SurA peptide-binding domain-like FKBP-like 33
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 32
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 32
Alpha-L RNA-binding motif Pseudouridine synthase 32
Trypsin-like serine proteases PDZ domain-like 33
Phospholipase D/nuclease Phospholipase D/nuclease 33
PDZ domain-like PDZ domain-like 33
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 32
HAMP domain-like Nucleotide cyclase 33
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 32
NAD(P)-binding Rossmann-fold domains ACP-like 32
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 32
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 31
HlyD-like secretion proteins HlyD-like secretion proteins 32
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 32
CBS-domain pair FAD-binding/transporter-associated domain-like 31
Aspartate/glutamate racemase Aspartate/glutamate racemase 31
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 31
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 33
lambda repressor-like DNA-binding domains RmlC-like cupins 31
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 33
Nucleic acid-binding proteins RuvA domain 2-like 33
HAMP domain-like Homodimeric domain of signal transducing histidine kinase 32
E set domains (Trans)glycosidases 33
HMA, heavy metal-associated domain HMA, heavy metal-associated domain 31
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 31
Lysozyme-like PGBD-like 31
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 31
HAMP domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 32
Methylated DNA-protein cysteine methyltransferase domain Methylated DNA-protein cysteine methyltransferase, C-terminal domain 33
Cytochrome c Cytochrome c 32
Metallo-dependent phosphatases 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain 33
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex CoA-dependent acyltransferases 32
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 33
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 32
Ribosomal protein S5 domain 2-like EF-G C-terminal domain-like 32
NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains 32
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 33
Probable ACP-binding domain of malonyl-CoA ACP transacylase ACP-like 21
2Fe-2S ferredoxin-like CO dehydrogenase ISP C-domain like 22
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 22
Galactose-binding domain-like beta-Galactosidase/glucuronidase domain 21
beta-lactamase/transpeptidase-like Sporulation related repeat 22
E set domains Glycosyl hydrolase domain 22
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 21
GAF domain-like Nucleotide cyclase 22
Thiolase-like ACP-like 21
Probable ACP-binding domain of malonyl-CoA ACP transacylase NAD(P)-binding Rossmann-fold domains 21
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 22
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 22
Macro domain-like Zn-dependent exopeptidases 21
NAD(P)-binding Rossmann-fold domains UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 21
Translation proteins SH3-like domain Nucleic acid-binding proteins 22
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 21
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 22
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 22
Thiolase-like NAD(P)-binding Rossmann-fold domains 21
ACP-like ACP-like 22
2Fe-2S ferredoxin-like Formate dehydrogenase/DMSO reductase, domains 1-3 22
LeuD/IlvD-like Aconitase iron-sulfur domain 22
Thiolase-like FabD/lysophospholipase-like 21
GAF domain-like Homeodomain-like 22
Class II aaRS and biotin synthetases ThrRS/AlaRS common domain 22
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 21
Galactose-binding domain-like (Trans)glycosidases 21
6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 21
Phage tail proteins Phage fibre proteins 22
Sensory domain-like HAMP domain-like 22
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Alpha subunit of glutamate synthase, C-terminal domain 22
Single hybrid motif Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 21
2Fe-2S ferredoxin-like Riboflavin synthase domain-like 22
Thiolase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 21
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
CBS-domain pair MgtE membrane domain-like 21
Aldolase post-HMGL domain-like 22
gp5 N-terminal domain-like Phage fibre proteins 22
Pectin lyase-like Autotransporter 22
NAD(P)-binding Rossmann-fold domains Siroheme synthase middle domains-like 21
HAMP domain-like EAL domain-like 22
MetI-like P-loop containing nucleoside triphosphate hydrolases 22
Sigma3 and sigma4 domains of RNA polymerase sigma factors NagB/RpiA/CoA transferase-like 21
L30e-like alpha/beta knot 21
ClpP/crotonase ClpP/crotonase 21
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 22
Nucleotide-binding domain FAD-linked reductases, C-terminal domain 21
Nucleotidyltransferase Poly A polymerase C-terminal region-like 22
Nitrite/Sulfite reductase N-terminal domain-like Nitrite/Sulfite reductase N-terminal domain-like 21
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 22
GroES-like GroES-like 21
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 22
Nqo1 middle domain-like Nqo1C-terminal domain-like 22
Single hybrid motif CoA-dependent acyltransferases 21
MurCD N-terminal domain MurD-like peptide ligases, catalytic domain 21
Phage tail proteins Phage tail proteins 22
TPR-like S-adenosyl-L-methionine-dependent methyltransferases 21
Nitrite and sulphite reductase 4Fe-4S domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 21
Glucocorticoid receptor-like (DNA-binding domain) P-loop containing nucleoside triphosphate hydrolases 22
FAD-binding/transporter-associated domain-like CO dehydrogenase flavoprotein C-terminal domain-like 22
Globin-like Methyl-accepting chemotaxis protein (MCP) signaling domain 22
Sensory domain-like Methyl-accepting chemotaxis protein (MCP) signaling domain 22
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FMN-linked oxidoreductases 22
PYP-like sensor domain (PAS domain) C-terminal effector domain of the bipartite response regulators 22
Translation proteins ThrRS/AlaRS common domain 22
NAD(P)-binding Rossmann-fold domains Isocitrate/Isopropylmalate dehydrogenase-like 21
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
DnaK suppressor protein DksA, alpha-hairpin domain Glucocorticoid receptor-like (DNA-binding domain) 21
PH0987 N-terminal domain-like Cyclophilin-like 22
Acetyl-CoA synthetase-like Acetyl-CoA synthetase-like 22
4Fe-4S ferredoxins Formate dehydrogenase/DMSO reductase, domains 1-3 22
Thioesterase/thiol ester dehydrase-isomerase Thioesterase/thiol ester dehydrase-isomerase 21
FMN-linked oxidoreductases Alpha subunit of glutamate synthase, C-terminal domain 22
2Fe-2S ferredoxin-like Ferredoxin reductase-like, C-terminal NADP-linked domain 22
CheY-like Nucleotide cyclase 21
Siroheme synthase middle domains-like Tetrapyrrole methylase 21
CO dehydrogenase molybdoprotein N-domain-like Molybdenum cofactor-binding domain 21
NAD(P)-binding Rossmann-fold domains ACT-like 22
beta-Galactosidase/glucuronidase domain (Trans)glycosidases 21
FAD/NAD(P)-binding domain HI0933 insert domain-like 21
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 22
GAF domain-like GAF domain-like 22
Rhodanese/Cell cycle control phosphatase Rhodanese/Cell cycle control phosphatase 22
Galactose mutarotase-like Six-hairpin glycosidases 22
AGR C 984p-like AGR C 984p-like 21
Cytochrome c oxidase subunit II-like, transmembrane region Cupredoxins 22
Translation proteins Ribosomal protein S5 domain 2-like 21
MgtE N-terminal domain-like MgtE membrane domain-like 21
HAMP domain-like PYP-like sensor domain (PAS domain) 22
Penicillin binding protein dimerisation domain beta-lactamase/transpeptidase-like 21
2Fe-2S ferredoxin-like 4Fe-4S ferredoxins 22
PYP-like sensor domain (PAS domain) GAF domain-like 22
Nqo1 FMN-binding domain-like Nqo1C-terminal domain-like 22
tRNA-binding arm Class II aaRS and biotin synthetases 21
Chaperone J-domain HSP40/DnaJ peptide-binding domain 22
FabD/lysophospholipase-like NAD(P)-binding Rossmann-fold domains 21
NAD(P)-binding Rossmann-fold domains Tetrapyrrole methylase 21
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
MurCD N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
Nqo1 FMN-binding domain-like Nqo1 middle domain-like 22
Nucleotidyltransferase ACT-like 22
Phage tail proteins gp5 N-terminal domain-like 22
PurM N-terminal domain-like PurM C-terminal domain-like 22
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 21
Fic-like "Winged helix" DNA-binding domain 21
FabD/lysophospholipase-like ACP-like 21
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 21
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 21
beta-Galactosidase/glucuronidase domain beta-Galactosidase/glucuronidase domain 21
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 21
TrkA C-terminal domain-like TrkA C-terminal domain-like 22
MgtE N-terminal domain-like CBS-domain pair 21
Aminoacid dehydrogenase-like, N-terminal domain Isocitrate/Isopropylmalate dehydrogenase-like 21
Diaminopimelate epimerase-like Diaminopimelate epimerase-like 21
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 21
GAF domain-like Homodimeric domain of signal transducing histidine kinase 22
Cupredoxins Cupredoxins 22
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 22
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
Homocysteine S-methyltransferase Cobalamin (vitamin B12)-binding domain 11
Metal cation-transporting ATPase, ATP-binding domain N Calcium ATPase, transmembrane domain M 11
DeoB insert domain-like Alkaline phosphatase-like 11
Metal cation-transporting ATPase, ATP-binding domain N HAD-like 11
Clc chloride channel CBS-domain pair 11
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 11
P-loop containing nucleoside triphosphate hydrolases C-terminal UvrC-binding domain of UvrB 11
Glutathione synthetase ATP-binding domain-like Aldolase 11
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Nucleic acid-binding proteins S-adenosyl-L-methionine-dependent methyltransferases 11
TGS-like ThrRS/AlaRS common domain 11
Sm-like ribonucleoproteins cAMP-binding domain-like 11
Peptidase/esterase 'gauge' domain alpha/beta-Hydrolases 11
PHP domain-like AF1531-like 11
Molybdenum cofactor biosynthesis proteins MoeA C-terminal domain-like 11
Mechanosensitive channel protein MscS (YggB), transmembrane region cAMP-binding domain-like 11
GroEL equatorial domain-like GroEL-intermediate domain like 11
RuvA domain 2-like JAB1/MPN domain 11
"Winged helix" DNA-binding domain S-adenosyl-L-methionine-dependent methyltransferases 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
Methylglyoxal synthase-like Cytidine deaminase-like 11
S13-like H2TH domain Glucocorticoid receptor-like (DNA-binding domain) 11
Tex N-terminal region-like RuvA domain 2-like 11
P-loop containing nucleoside triphosphate hydrolases ARM repeat 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 11
2Fe-2S ferredoxin-like ADC-like 11
Serine metabolism enzymes domain ACT-like 11
Transmembrane di-heme cytochromes a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 11
Tex N-terminal region-like Nucleic acid-binding proteins 11
ABC transporter involved in vitamin B12 uptake, BtuC ABC transporter involved in vitamin B12 uptake, BtuC 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphoenolpyruvate/pyruvate domain 11
Aconitase B, N-terminal domain LeuD/IlvD-like 11
FliG FliG 11
Nucleic acid-binding proteins GAD domain-like 11
LmbE-like Class I glutamine amidotransferase-like 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Nucleic acid-binding proteins 11
Tryptophan synthase beta subunit-like PLP-dependent enzymes ACT-like 11
Nucleic acid-binding proteins PheT/TilS domain 11
N-terminal domain of bifunctional PutA protein ALDH-like 11
Translation proteins Translation proteins 11
dUTPase-like dUTPase-like 11
Nudix "Winged helix" DNA-binding domain 11
Rho N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
Cytidine deaminase-like Dihydrofolate reductase-like 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 11
FAD-binding/transporter-associated domain-like Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain 11
TGS-like ACT-like 11
Pseudouridine synthase PUA domain-like 11
N-terminal domain of bifunctional PutA protein FAD-linked oxidoreductase 11
beta-Roll Concanavalin A-like lectins/glucanases 11
Prokaryotic type KH domain (KH-domain type II) Prokaryotic type KH domain (KH-domain type II) 11
Metallo-dependent phosphatases LysM domain 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
Poly A polymerase C-terminal region-like ACT-like 11
PreATP-grasp domain post-HMGL domain-like 11
RuvA domain 2-like RuvA domain 2-like 11
PDZ domain-like ClpP/crotonase 11
6-phosphogluconate dehydrogenase C-terminal domain-like Thioesterase/thiol ester dehydrase-isomerase 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
ClpP/crotonase NAD(P)-binding Rossmann-fold domains 11
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 11
HCP-like PGBD-like 11
PGBD-like PGBD-like 11
Homocysteine S-methyltransferase Methionine synthase domain 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
Ribonuclease PH domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
PreATP-grasp domain Methylglyoxal synthase-like 11
Class II aaRS and biotin synthetases GAD domain-like 11
Elongation factor Ts (EF-Ts), dimerisation domain Elongation factor Ts (EF-Ts), dimerisation domain 11
Homocysteine S-methyltransferase Methionine synthase activation domain-like 11
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 11
2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain Alkaline phosphatase-like 11
Single hybrid motif TK C-terminal domain-like 11
PHP14-like Phospholipase D/nuclease 11
Carbamate kinase-like ACT-like 11
CheY-like Methylesterase CheB, C-terminal domain 11
all-alpha NTP pyrophosphatases all-alpha NTP pyrophosphatases 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 11
"Winged helix" DNA-binding domain Acyl-CoA N-acyltransferases (Nat) 11
YebC-like PFL-like glycyl radical enzymes 11
HD-domain/PDEase-like Nucleotidyltransferase 11
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 11
HD-domain/PDEase-like ACT-like 11
Formate/glycerate dehydrogenase catalytic domain-like Serine metabolism enzymes domain 11
HAMP domain-like GAF domain-like 11
2Fe-2S ferredoxin-like FAD-binding/transporter-associated domain-like 11
Galactose mutarotase-like Galactose mutarotase-like 11
Nucleotidyltransferase substrate binding subunit/domain ACT-like 11
Nucleic acid-binding proteins BRCT domain 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
Hypothetical protein SAV1430 Fe-S cluster assembly (FSCA) domain-like 11
Nucleic acid-binding proteins Putative DNA-binding domain 11
GroEL-intermediate domain like GroEL apical domain-like 11
2Fe-2S ferredoxin-like Nucleotide cyclase 11
Calcium ATPase, transduction domain A Metal cation-transporting ATPase, ATP-binding domain N 11
Nucleotide-diphospho-sugar transferases RmlC-like cupins 11
P-loop containing nucleoside triphosphate hydrolases Protein kinase-like (PK-like) 11
N-terminal domain of MutM-like DNA repair proteins Glucocorticoid receptor-like (DNA-binding domain) 11
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 11
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 11
Mechanosensitive channel protein MscS (YggB), C-terminal domain cAMP-binding domain-like 11
Radical SAM enzymes RuvA domain 2-like 11
CO dehydrogenase ISP C-domain like FAD-binding/transporter-associated domain-like 11
Ribonuclease H-like Nucleic acid-binding proteins 11
Methionine synthase domain Cobalamin (vitamin B12)-binding domain 11
Nucleotidyltransferase Nucleotidyltransferase 11
GIY-YIG endonuclease C-terminal UvrC-binding domain of UvrB 11
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 11
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 11
YrdC/RibB RibA-like 11
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Pyrimidine nucleoside phosphorylase C-terminal domain 11
Transcription factor NusA, N-terminal domain Rad51 N-terminal domain-like 11
Nucleotide-diphospho-sugar transferases UDP-Glycosyltransferase/glycogen phosphorylase 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
Fe-S cluster assembly (FSCA) domain-like P-loop containing nucleoside triphosphate hydrolases 11
Carbon-nitrogen hydrolase Adenine nucleotide alpha hydrolases-like 11
Nucleotidylyl transferase tRNA-binding arm 11
DAK1/DegV-like DhaL-like 11
Phosphoglycerate mutase-like NAD(P)-binding Rossmann-fold domains 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
Dihydropteroate synthetase-like Methionine synthase domain 11
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 11
FAD/NAD(P)-binding domain Nitrite and sulphite reductase 4Fe-4S domain-like 11
Sensory domain-like Homodimeric domain of signal transducing histidine kinase 11
Rho N-terminal domain-like Nucleic acid-binding proteins 11
Nucleotidyltransferase substrate binding subunit/domain Poly A polymerase C-terminal region-like 11
Transcription factor NusA, N-terminal domain Nucleic acid-binding proteins 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 11
Methionine synthase domain Methionine synthase activation domain-like 11
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 11
PheT/TilS domain Class II aaRS and biotin synthetases 11
Tex N-terminal region-like Ribonuclease H-like 11
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 11
TPR-like HCP-like 11
NAD(P)-binding Rossmann-fold domains Serine metabolism enzymes domain 11
YhbC-like, N-terminal domain YhbC-like, C-terminal domain 11
Fumarate reductase respiratory complex transmembrane subunits 2Fe-2S ferredoxin-like 11
MoeA N-terminal region -like MoeA C-terminal domain-like 11
Glutathione synthetase ATP-binding domain-like Phosphoenolpyruvate/pyruvate domain 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) Methylated DNA-protein cysteine methyltransferase domain 11
Formyltransferase FMT C-terminal domain-like 11
GAF domain-like Calcium-dependent phosphotriesterase 11
Hsp33 domain HSP33 redox switch-like 11
Actin-like ATPase domain HD-domain/PDEase-like 11
"Winged helix" DNA-binding domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 11
YjeF N-terminal domain-like Ribokinase-like 11
FAD/NAD(P)-binding domain 4Fe-4S ferredoxins 11
Sigma3 and sigma4 domains of RNA polymerase sigma factors CheY-like 11
CBS-domain pair Nucleotide cyclase 11
Tetrapyrrole methylase S-adenosyl-L-methionine-dependent methyltransferases 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheW-like 11
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 11
GAF domain-like P-loop containing nucleoside triphosphate hydrolases 11
Acetyl-CoA synthetase-like NAD(P)-binding Rossmann-fold domains 11
P-loop containing nucleoside triphosphate hydrolases HRDC-like 11
Homodimeric domain of signal transducing histidine kinase CheW-like 11
HD-domain/PDEase-like TGS-like 11
Glutathione synthetase ATP-binding domain-like Glycoside hydrolase/deacetylase 11
(Phosphotyrosine protein) phosphatases II Metallo-hydrolase/oxidoreductase 11
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 11
Dihydropteroate synthetase-like Methionine synthase activation domain-like 11
RBP11-like subunits of RNA polymerase C-terminal domain of RNA polymerase alpha subunit 11
DNA ligase/mRNA capping enzyme, catalytic domain RuvA domain 2-like 11
NAD(P)-binding Rossmann-fold domains Thioesterase/thiol ester dehydrase-isomerase 11
ACP-like Trimeric LpxA-like enzymes 11
DNA topoisomerase I domain DNA breaking-rejoining enzymes 11
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
GAF domain-like CheY-like 11
CoA-dependent acyltransferases NAD(P)-binding Rossmann-fold domains 11
Acetyl-CoA synthetase-like Trimeric LpxA-like enzymes 11
PPK N-terminal domain-like Phospholipase D/nuclease 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
N-terminal domain of DnaB helicase P-loop containing nucleoside triphosphate hydrolases 11
TPR-like Terpenoid cyclases/Protein prenyltransferases 11
FAD-linked oxidoreductase ALDH-like 11
Glutathione synthetase ATP-binding domain-like Succinyl-CoA synthetase domains 11
Hairpin loop containing domain-like Terpenoid cyclases/Protein prenyltransferases 11
Putative DNA-binding domain Citrate synthase 11
Fumarate reductase respiratory complex transmembrane subunits Nucleotide cyclase 11
Homeodomain-like Methylated DNA-protein cysteine methyltransferase domain 11
LysM domain LysM domain 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
Rudiment single hybrid motif Aldolase 11
AF0104/ALDC/Ptd012-like AF0104/ALDC/Ptd012-like 11
P-loop containing nucleoside triphosphate hydrolases Smc hinge domain 11
post-HMGL domain-like 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 11
PLP-dependent transferases PLP-dependent transferases 11
CarD-like TRCF domain-like 11
Nucleotide-diphospho-sugar transferases Six-hairpin glycosidases 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain NAD(P)-linked oxidoreductase 11
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 11
RuvA domain 2-like DNA helicase RuvA subunit, C-terminal domain 11
PUA domain-like alpha/beta knot 11
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 11
PUA domain-like Ribosomal protein S5 domain 2-like 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
P-loop containing nucleoside triphosphate hydrolases CarD-like 11
HRDC-like HRDC-like 11
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 11
beta-N-acetylhexosaminidase-like domain (Trans)glycosidases 11
Ribosomal protein S5 domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
FAD-linked reductases, C-terminal domain 4Fe-4S ferredoxins 11
NAD(P)-binding Rossmann-fold domains TrkA C-terminal domain-like 11
Aldolase Single hybrid motif 11
RuvA domain 2-like BRCT domain 11
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 11
Rudiment single hybrid motif post-HMGL domain-like 11
Urease metallochaperone UreE, N-terminal domain Urease metallochaperone UreE, C-terminal domain 11
lambda repressor-like DNA-binding domains LexA/Signal peptidase 11
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 11
Nucleic acid-binding proteins Anticodon-binding domain of PheRS 11
Nucleotide-diphospho-sugar transferases IpsF-like 11
TolB, N-terminal domain Tricorn protease N-terminal domain 11
Galactose mutarotase-like (Trans)glycosidases 11
Cryptochrome/photolyase, N-terminal domain Cryptochrome/photolyase FAD-binding domain 11
FAD-linked reductases, C-terminal domain Aminomethyltransferase beta-barrel domain 11
MFS general substrate transporter MFS general substrate transporter 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
P-loop containing nucleoside triphosphate hydrolases TGS-like 11
Hairpin loop containing domain-like TPR-like 11
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
MoeA N-terminal region -like Molybdenum cofactor biosynthesis proteins 11
L9 N-domain-like Ribosomal protein L9 C-domain 11
5' to 3' exonuclease, C-terminal subdomain DNA/RNA polymerases 11
Trimeric LpxA-like enzymes Trimeric LpxA-like enzymes 11
Homeodomain-like Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
MOSC N-terminal domain-like PK beta-barrel domain-like 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 11
ACP-like FMN-dependent nitroreductase-like 11
Nucleic acid-binding proteins ArfGap/RecO-like zinc finger 11
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 11
FAD-linked reductases, C-terminal domain Folate-binding domain 11
C-terminal UvrC-binding domain of UvrB RuvA domain 2-like 11
ADC synthase Class I glutamine amidotransferase-like 11
Folate-binding domain TrmE connector domain 11
FMN-binding split barrel UbiD C-terminal domain-like 11
DNA clamp DNA clamp 11
Nucleotidyltransferase substrate binding subunit/domain Nucleotidyltransferase substrate binding subunit/domain 11
TerB-like Chaperone J-domain 11
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 11
"Winged helix" DNA-binding domain LexA/Signal peptidase 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 11
PPK N-terminal domain-like PHP14-like 11
Nucleotidyltransferase TGS-like 11
Adenine nucleotide alpha hydrolases-like Adenine nucleotide alpha hydrolases-like 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 11
Chemotaxis receptor methyltransferase CheR, N-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 11
Heme-dependent peroxidases Heme-dependent peroxidases 11
GIY-YIG endonuclease RuvA domain 2-like 11
Bet v1-like Bet v1-like 11
R1 subunit of ribonucleotide reductase, N-terminal domain PFL-like glycyl radical enzymes 11
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase alpha/beta-Hydrolases 11
lambda integrase-like, N-terminal domain DNA breaking-rejoining enzymes 11
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 11
Ribosomal protein L6 Ribosomal protein L6 11
Xylose isomerase-like Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 11
Acetyl-CoA synthetase-like FMN-dependent nitroreductase-like 11
"Winged helix" DNA-binding domain Calcium-dependent phosphotriesterase 11
Rhodanese/Cell cycle control phosphatase Acyl-CoA N-acyltransferases (Nat) 11
Nucleic acid-binding proteins Prokaryotic type KH domain (KH-domain type II) 11
P-loop containing nucleoside triphosphate hydrolases TrpR-like 11
Apolipoprotein A-I Apolipoprotein A-I 11
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
P-loop containing nucleoside triphosphate hydrolases Restriction endonuclease-like 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Eukaryotic type KH-domain (KH-domain type I) 11
"Winged helix" DNA-binding domain Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain 11
Heme-dependent catalase-like Class I glutamine amidotransferase-like 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
PIN domain-like Ribonuclease H-like 11
Nucleotide-diphospho-sugar transferases Galactose mutarotase-like 11
Glutathione synthetase ATP-binding domain-like post-HMGL domain-like 11
FMN-linked oxidoreductases FAD/NAD(P)-binding domain 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 11
NagB/RpiA/CoA transferase-like D-ribose-5-phosphate isomerase (RpiA), lid domain 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
Class II aaRS and biotin synthetases Translation proteins 11
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 11
PK beta-barrel domain-like PK C-terminal domain-like 11
Trigger factor ribosome-binding domain FKBP-like 11
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 11
ALDH-like ALDH-like 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
post-HMGL domain-like Single hybrid motif 11
Adenine nucleotide alpha hydrolases-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Histidine-containing phosphotransfer domain, HPT domain Homodimeric domain of signal transducing histidine kinase 11
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 11
E set domains E set domains 11
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 11
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 11
YlxR-like L30e-like 11
Nucleotide-binding domain Nucleotide-binding domain 11
Acyl-CoA N-acyltransferases (Nat) TPR-like 11
GAF domain-like Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 11
Homocysteine S-methyltransferase Dihydropteroate synthetase-like 11
Creatinase/prolidase N-terminal domain Creatinase/prolidase N-terminal domain 11
Homeodomain-like Probable bacterial effector-binding domain 11
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 11
Putative DNA-binding domain Anticodon-binding domain of PheRS 11
NagB/RpiA/CoA transferase-like NagB/RpiA/CoA transferase-like 11
GAF domain-like Phosphoenolpyruvate/pyruvate domain 11
Transcription factor NusA, N-terminal domain Prokaryotic type KH domain (KH-domain type II) 11
beta-Roll Cadherin-like 11
Nucleic acid-binding proteins DNA helicase RuvA subunit, C-terminal domain 11
Ribonuclease H-like HRDC-like 11
Carbon-nitrogen hydrolase Carbon-nitrogen hydrolase 11
Glutamine synthetase/guanido kinase GatB/YqeY motif 11
Riboflavin synthase domain-like Riboflavin synthase domain-like 11
PheT/TilS domain Anticodon-binding domain of PheRS 11
Metallo-dependent phosphatases beta-Roll 11
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 11
Sensory domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Folate-binding domain P-loop containing nucleoside triphosphate hydrolases 11
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 11
Cobalamin (vitamin B12)-dependent enzymes Cobalamin (vitamin B12)-binding domain 11
PEP carboxykinase N-terminal domain PEP carboxykinase-like 11
RNase III domain-like dsRNA-binding domain-like 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
TPR-like TPR-like 11
ISP domain Bet v1-like 11
Cobalamin (vitamin B12)-binding domain Methionine synthase activation domain-like 11
Prokaryotic type KH domain (KH-domain type II) Rad51 N-terminal domain-like 11
"Winged helix" DNA-binding domain HRDC-like 11
alpha/beta-Hydrolases alpha/beta-Hydrolases 11
Class II aaRS and biotin synthetases C-terminal domain of transcriptional repressors 11
S-adenosyl-L-methionine-dependent methyltransferases Nucleotide-diphospho-sugar transferases 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase C-terminal effector domain of the bipartite response regulators 11
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 11
Histidine-containing phosphotransfer domain, HPT domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
GreA transcript cleavage protein, N-terminal domain FKBP-like 11
DPP6 N-terminal domain-like alpha/beta-Hydrolases 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
beta-Roll beta-Roll 11
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 11
Arabinanase/levansucrase/invertase Concanavalin A-like lectins/glucanases 11
Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Pyrimidine nucleoside phosphorylase C-terminal domain 11
Zinc beta-ribbon DNA primase core 11
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 11
Dihydropteroate synthetase-like Cobalamin (vitamin B12)-binding domain 11
CoA-dependent acyltransferases FMN-dependent nitroreductase-like 11
NAD(P)-binding Rossmann-fold domains NAD(P)-linked oxidoreductase 11
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 11
Cyclophilin-like Cyclophilin-like 11
GAF domain-like Phosphohistidine domain 11
GroEL equatorial domain-like GroEL apical domain-like 11
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 11
Prokaryotic type I DNA topoisomerase Zinc beta-ribbon 11
AraD/HMP-PK domain-like NAD(P)-binding Rossmann-fold domains 11
P-loop containing nucleoside triphosphate hydrolases ACT-like 11
TGS-like Class II aaRS and biotin synthetases 11
Translation proteins PRC-barrel domain 11
FAD/NAD(P)-binding domain Nitrite/Sulfite reductase N-terminal domain-like 11
4Fe-4S ferredoxins ADC-like 11
Thioredoxin-like TPR-like 11
Galactose mutarotase-like Glycosyl hydrolase domain 11
DNA-glycosylase Nudix 11
NTF2-like FAD/NAD(P)-binding domain 11
Alpha-L RNA-binding motif S-adenosyl-L-methionine-dependent methyltransferases 11
LysM domain Duplicated hybrid motif 11
Metallo-dependent phosphatases Cadherin-like 11
Periplasmic binding protein-like II ACT-like 11
Leukotriene A4 hydrolase N-terminal domain Metalloproteases ("zincins"), catalytic domain 11
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 11
Translation proteins Initiation factor IF2/eIF5b, domain 3 11
ClpP/crotonase 6-phosphogluconate dehydrogenase C-terminal domain-like 11
Adenine nucleotide alpha hydrolases-like GAF domain-like 11
EAL domain-like CBS-domain pair 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphohistidine domain 11
Ribonuclease H-like DNA/RNA polymerases 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain ACT-like 11
Nucleic acid-binding proteins Rad51 N-terminal domain-like 11
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 11
Phage fibre proteins Phage fibre proteins 11
TGS-like Class II aaRS ABD-related 11
5' to 3' exonuclease, C-terminal subdomain Ribonuclease H-like 11
Homo-oligomeric flavin-containing Cys decarboxylases, HFCD CoaB-like 11
PreATP-grasp domain PreATP-grasp domain 11
2Fe-2S ferredoxin-like CO dehydrogenase flavoprotein C-terminal domain-like 11
Adenine nucleotide alpha hydrolases-like DHS-like NAD/FAD-binding domain 11
Formate/glycerate dehydrogenase catalytic domain-like ACT-like 11
beta-lactamase/transpeptidase-like Penicillin-binding protein associated domain 11
Acid phosphatase/Vanadium-dependent haloperoxidase Pectin lyase-like 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
Bacterial muramidases Lysozyme-like 11
Adenine nucleotide alpha hydrolases-like Homodimeric domain of signal transducing histidine kinase 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 11
PreATP-grasp domain Aldolase 11
N-acetylmuramoyl-L-alanine amidase-like PGBD-like 11
Flavoproteins Riboflavin synthase domain-like 11
Flavoproteins Ferredoxin reductase-like, C-terminal NADP-linked domain 11
Aconitase B, N-terminal domain Aconitase iron-sulfur domain 11
Eukaryotic type KH-domain (KH-domain type I) Nucleic acid-binding proteins 11
Tricorn protease N-terminal domain Autotransporter 11
PIN domain-like DNA/RNA polymerases 11
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 11
PheT/TilS domain Putative DNA-binding domain 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
Putative DNA-binding domain C-terminal effector domain of the bipartite response regulators 11
5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain LysM domain 11
Histidine-containing phosphotransfer domain, HPT domain CheW-like 11
CO dehydrogenase ISP C-domain like CO dehydrogenase flavoprotein C-terminal domain-like 11
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 11
2Fe-2S ferredoxin-like alpha-helical ferredoxin 11
Homodimeric domain of signal transducing histidine kinase C-terminal effector domain of the bipartite response regulators 11
TrmE connector domain P-loop containing nucleoside triphosphate hydrolases 11
Carbamate kinase-like PUA domain-like 11
Nucleotidylyl transferase Riboflavin kinase-like 11
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
Single hybrid motif Thiamin diphosphate-binding fold (THDP-binding) 11
Ribonuclease H-like RuvA domain 2-like 11
alpha-helical ferredoxin Nucleotide-binding domain 11
S-adenosyl-L-methionine-dependent methyltransferases P-loop containing nucleoside triphosphate hydrolases 11

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