SUPERFAMILY 1.75 HMM library and genome assignments server

Domain combination pairs in Bacillus pseudofirmus OF4

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

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Adjacent domain pairs graph

Graph of adjacent domain pairs.


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Domain combination pairs

692 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 2913
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 2611
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 184
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 172
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 158
CheY-like C-terminal effector domain of the bipartite response regulators 141
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 139
Actin-like ATPase domain Actin-like ATPase domain 133
HAMP domain-like Homodimeric domain of signal transducing histidine kinase 123
Composite domain of metallo-dependent hydrolases Metallo-dependent hydrolases 124
HAMP domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 123
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 112
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 111
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 116
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 104
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 94
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 91
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 92
Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase C-terminal domain-like 93
lambda repressor-like DNA-binding domains Periplasmic binding protein-like I 81
PYP-like sensor domain (PAS domain) Homeodomain-like 83
PYP-like sensor domain (PAS domain) P-loop containing nucleoside triphosphate hydrolases 83
Homeodomain-like Tetracyclin repressor-like, C-terminal domain 81
PYP-like sensor domain (PAS domain) PYP-like sensor domain (PAS domain) 86
GroES-like NAD(P)-binding Rossmann-fold domains 81
P-loop containing nucleoside triphosphate hydrolases Translation proteins 76
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 72
Calcium ATPase, transduction domain A HAD-like 75
Thiolase-like Thiolase-like 71
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 75
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 72
HAD-like Calcium ATPase, transmembrane domain M 75
PYP-like sensor domain (PAS domain) Nucleotide cyclase 65
Sensory domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 63
(Trans)glycosidases Glycosyl hydrolase domain 63
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 62
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 63
Lysozyme-like beta-lactamase/transpeptidase-like 64
PreATP-grasp domain Rudiment single hybrid motif 62
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 66
Sensory domain-like PYP-like sensor domain (PAS domain) 63
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 53
Metallo-dependent phosphatases 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain 55
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 53
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 53
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 54
Nucleotide cyclase EAL domain-like 54
"Winged helix" DNA-binding domain Dimeric alpha+beta barrel 51
PTS-regulatory domain, PRD PTS-regulatory domain, PRD 53
HMA, heavy metal-associated domain HAD-like 53
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 53
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 51
"Winged helix" DNA-binding domain GAF domain-like 51
PurM N-terminal domain-like PurM C-terminal domain-like 52
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 54
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 53
Formate dehydrogenase/DMSO reductase, domains 1-3 ADC-like 41
Enolase N-terminal domain-like Enolase C-terminal domain-like 41
Alpha-L RNA-binding motif Pseudouridine synthase 41
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 41
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 43
PGBD-like PGBD-like 44
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 42
ACT-like ACT-like 42
Sensory domain-like Sporulation response regulatory protein Spo0B 41
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein S5 domain 2-like 44
Translation proteins EF-G C-terminal domain-like 43
Sporulation response regulatory protein Spo0B ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 41
GAF domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 44
Phospholipase D/nuclease Phospholipase D/nuclease 43
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 42
PYP-like sensor domain (PAS domain) Sporulation response regulatory protein Spo0B 41
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 43
"Winged helix" DNA-binding domain Chorismate lyase-like 41
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 41
Rhodanese/Cell cycle control phosphatase Metallo-hydrolase/oxidoreductase 42
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 43
PYP-like sensor domain (PAS domain) EAL domain-like 43
Homeodomain-like SIS domain 41
Nucleic acid-binding proteins Nucleic acid-binding proteins 44
"Winged helix" DNA-binding domain Periplasmic binding protein-like II 41
lambda repressor-like DNA-binding domains TPR-like 42
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 33
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 31
NAD(P)-binding Rossmann-fold domains TrkA C-terminal domain-like 32
beta-lactamase/transpeptidase-like Penicillin-binding protein associated domain 32
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 33
Carbamate kinase-like ACT-like 31
HAMP domain-like PYP-like sensor domain (PAS domain) 32
Homeodomain-like Homeodomain-like 33
Lysozyme-like Duplicated hybrid motif 32
Single hybrid motif CoA-dependent acyltransferases 31
RuvA domain 2-like Nucleic acid-binding proteins 33
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 33
PTS system IIB component-like Phoshotransferase/anion transport protein 33
Penicillin binding protein dimerisation domain beta-lactamase/transpeptidase-like 33
Rhodanese/Cell cycle control phosphatase Rhodanese/Cell cycle control phosphatase 32
NAD(P)-binding Rossmann-fold domains ACT-like 33
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 33
SacY-like RNA-binding domain PTS-regulatory domain, PRD 31
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 32
Class II aaRS and biotin synthetases Class II aaRS ABD-related 33
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 31
NagB/RpiA/CoA transferase-like NagB/RpiA/CoA transferase-like 32
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Adenine nucleotide alpha hydrolases-like 31
Cobalamin (vitamin B12)-binding domain Cobalamin (vitamin B12)-dependent enzymes 32
CBS-domain pair FAD-binding/transporter-associated domain-like 31
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 33
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 32
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 31
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 32
ClpP/crotonase ClpP/crotonase 31
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex CoA-dependent acyltransferases 31
Single hybrid motif Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 31
EF-G C-terminal domain-like EF-G C-terminal domain-like 32
Globin-like Methyl-accepting chemotaxis protein (MCP) signaling domain 32
"Winged helix" DNA-binding domain GntR ligand-binding domain-like 31
Sensory domain-like Methyl-accepting chemotaxis protein (MCP) signaling domain 31
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 32
TPR-like TPR-like 32
DNA clamp DNA clamp 21
TPR-like C-terminal effector domain of the bipartite response regulators 22
PTS-regulatory domain, PRD PTS system IIB component-like 22
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 21
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 22
CheC-like Surface presentation of antigens (SPOA) 22
Metallo-hydrolase/oxidoreductase RuvA domain 2-like 22
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 22
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 22
Copper amine oxidase, domain N Zn-dependent exopeptidases 22
tRNA-binding arm Class II aaRS and biotin synthetases 21
P-loop containing nucleoside triphosphate hydrolases Restriction endonuclease-like 22
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 22
EF-G C-terminal domain-like Ribosomal protein S5 domain 2-like 22
Triger factor/SurA peptide-binding domain-like FKBP-like 22
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 22
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 22
6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 21
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 22
HMA, heavy metal-associated domain HMA, heavy metal-associated domain 22
LysM domain Zn-dependent exopeptidases 22
PRC-barrel domain PRC-barrel domain 21
Copper amine oxidase, domain N PR-1-like 22
NAD(P)-binding Rossmann-fold domains UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 21
Cupredoxins Cupredoxins 22
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 21
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 22
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 22
DNA methylase specificity domain DNA methylase specificity domain 21
PLP-dependent transferases Ornithine decarboxylase C-terminal domain 21
CheW-like CheY-like 22
"Winged helix" DNA-binding domain Thioesterase/thiol ester dehydrase-isomerase 22
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 22
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 21
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 22
PLP-binding barrel Alanine racemase C-terminal domain-like 22
Ribonuclease H-like Nucleic acid-binding proteins 22
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 22
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 22
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 21
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 22
Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), C-terminal domain 22
beta-lactamase/transpeptidase-like Fibronectin type III 22
beta-lactamase/transpeptidase-like Penicillin-binding protein 2x (pbp-2x), c-terminal domain 22
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 21
P-loop containing nucleoside triphosphate hydrolases MOP-like 21
PTS-regulatory domain, PRD Phoshotransferase/anion transport protein 22
P-loop containing nucleoside triphosphate hydrolases ACT-like 21
Methionine synthase domain Cobalamin (vitamin B12)-binding domain 22
Penicillin binding protein dimerisation domain Penicillin-binding protein 2x (pbp-2x), c-terminal domain 22
Serine metabolism enzymes domain ACT-like 22
Sm-like ribonucleoproteins Mechanosensitive channel protein MscS (YggB), C-terminal domain 22
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 21
ParB/Sulfiredoxin KorB DNA-binding domain-like 21
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 22
Protease propeptides/inhibitors Subtilisin-like 21
Lysozyme-like Fibronectin type III 22
FAD/NAD(P)-binding domain Nitrite and sulphite reductase 4Fe-4S domain-like 21
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 21
Rhodanese/Cell cycle control phosphatase SirA-like 22
Sensory domain-like Homodimeric domain of signal transducing histidine kinase 22
Glucocorticoid receptor-like (DNA-binding domain) P-loop containing nucleoside triphosphate hydrolases 22
Nucleotidyltransferase Poly A polymerase C-terminal region-like 22
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 22
PGBD-like Cysteine proteinases 22
"Winged helix" DNA-binding domain NagB/RpiA/CoA transferase-like 21
Copper amine oxidase, domain N beta-lactamase/transpeptidase-like 22
PreATP-grasp domain PreATP-grasp domain 22
Tetrapyrrole methylase HemD-like 21
Cysteine proteinases Cysteine proteinases 22
Nucleic acid-binding proteins S-adenosyl-L-methionine-dependent methyltransferases 21
ThrRS/AlaRS common domain Class II aaRS and biotin synthetases 22
"Winged helix" DNA-binding domain CBS-domain pair 22
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 22
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 22
CBS-domain pair MgtE membrane domain-like 21
MurCD N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 21
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB transmembrane domain 22
Nucleic acid-binding proteins Translation proteins SH3-like domain 22
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 22
Aminopeptidase/glucanase lid domain Zn-dependent exopeptidases 21
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 22
Aldolase post-HMGL domain-like 22
MgtE N-terminal domain-like CBS-domain pair 21
alpha-helical ferredoxin Nucleotide-binding domain 21
PA domain Subtilisin-like 21
MgtE N-terminal domain-like MgtE membrane domain-like 21
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 22
CheY-like "Winged helix" DNA-binding domain 21
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 22
FAD/NAD(P)-binding domain Nitrite/Sulfite reductase N-terminal domain-like 21
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB transmembrane domain 22
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 21
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
CBS-domain pair ACT-like 21
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 22
GAF domain-like Homodimeric domain of signal transducing histidine kinase 22
MurCD N-terminal domain MurD-like peptide ligases, catalytic domain 21
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 21
Translation proteins ThrRS/AlaRS common domain 22
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 22
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 22
CheY-like Homeodomain-like 22
L30e-like alpha/beta knot 21
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 21
PDZ domain-like Trypsin-like serine proteases 22
Ribosomal protein L6 Ribosomal protein L6 11
FliG FliG 11
Putative DNA-binding domain Putative DNA-binding domain 11
TPR-like Hypothetical protein MPN330 11
P-loop containing nucleoside triphosphate hydrolases Obg GTP-binding protein C-terminal domain 11
FMN-binding split barrel UbiD C-terminal domain-like 11
GAF domain-like CheY-like 11
Translation proteins PRC-barrel domain 11
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 11
Transcription factor NusA, N-terminal domain Prokaryotic type KH domain (KH-domain type II) 11
P-loop containing nucleoside triphosphate hydrolases C-terminal effector domain of the bipartite response regulators 11
Adenine nucleotide alpha hydrolases-like DHS-like NAD/FAD-binding domain 11
Nucleotidyltransferase Nucleotidyltransferase substrate binding subunit/domain 11
Dihydropteroate synthetase-like Methionine synthase domain 11
Cytochrome c oxidase subunit II-like, transmembrane region Cupredoxins 11
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 11
Nucleotidyltransferase PHP domain-like 11
Adenine nucleotide alpha hydrolases-like PheT/TilS domain 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
Nucleotidyltransferase TGS-like 11
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 11
Rho N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
Aspartate/glutamate racemase Aspartate/glutamate racemase 11
Ribosomal protein S5 domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
Nucleic acid-binding proteins Putative DNA-binding domain 11
all-alpha NTP pyrophosphatases all-alpha NTP pyrophosphatases 11
Homocysteine S-methyltransferase FAD-linked oxidoreductase 11
L9 N-domain-like Ribonuclease H-like 11
Nucleic acid-binding proteins Prokaryotic type KH domain (KH-domain type II) 11
Glycoside hydrolase/deacetylase UDP-Glycosyltransferase/glycogen phosphorylase 11
Nucleic acid-binding proteins DNA helicase RuvA subunit, C-terminal domain 11
Tex N-terminal region-like Nucleic acid-binding proteins 11
PIN domain-like DNA/RNA polymerases 11
Class II aaRS and biotin synthetases C-terminal domain of transcriptional repressors 11
CheY-like Nucleotide cyclase 11
Histidine-containing phosphotransfer domain, HPT domain CheY-binding domain of CheA 11
E set domains E set domains 11
PPK N-terminal domain-like Phospholipase D/nuclease 11
5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain 11
Nucleic acid-binding proteins PheT/TilS domain 11
Ribonuclease H-like TPR-like 11
Dihydropteroate synthetase-like Methionine synthase activation domain-like 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
FAD-binding/transporter-associated domain-like Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain 11
Nucleic acid-binding proteins ArfGap/RecO-like zinc finger 11
CarD-like TRCF domain-like 11
DNA polymerase beta, N-terminal domain-like Nucleotidyltransferase 11
P-loop containing nucleoside triphosphate hydrolases CarD-like 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 11
Glutathione synthetase ATP-binding domain-like Single hybrid motif 11
Fic-like "Winged helix" DNA-binding domain 11
GlnB-like GlnB-like 11
Glutamine synthetase/guanido kinase GatB/YqeY motif 11
Metal cation-transporting ATPase, ATP-binding domain N Calcium ATPase, transmembrane domain M 11
PDZ domain-like ClpP/crotonase 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
RuvA domain 2-like BRCT domain 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
KaiA/RbsU domain PP2C-like 11
LysM domain L,D-transpeptidase catalytic domain-like 11
CheY-like P-loop containing nucleoside triphosphate hydrolases 11
PheT/TilS domain Anticodon-binding domain of PheRS 11
N-terminal domain of DnaB helicase P-loop containing nucleoside triphosphate hydrolases 11
Homo-oligomeric flavin-containing Cys decarboxylases, HFCD CoaB-like 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
Histidine-containing phosphotransfer domain, HPT domain Nucleotide cyclase 11
HprK N-terminal domain-like PEP carboxykinase-like 11
Homocysteine S-methyltransferase Methionine synthase activation domain-like 11
RBP11-like subunits of RNA polymerase C-terminal domain of RNA polymerase alpha subunit 11
Fe-S cluster assembly (FSCA) domain-like P-loop containing nucleoside triphosphate hydrolases 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
Duplicated hybrid motif LysM domain 11
(Trans)glycosidases Cyclophilin-like 11
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 11
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 11
Nucleotidylyl transferase Nucleic acid-binding proteins 11
PUA domain-like Ribosomal protein S5 domain 2-like 11
Nucleotide cyclase DHH phosphoesterases 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheY-like 11
Rhomboid-like TPR-like 11
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 11
Folate-binding domain Aminomethyltransferase beta-barrel domain 11
5' to 3' exonuclease, C-terminal subdomain Ribonuclease H-like 11
Metal cation-transporting ATPase, ATP-binding domain N HAD-like 11
lambda repressor-like DNA-binding domains RmlC-like cupins 11
PA domain Zn-dependent exopeptidases 11
YrdC/RibB Actin-like ATPase domain 11
Thioredoxin-like FAD/NAD(P)-binding domain 11
Class II aaRS and biotin synthetases Translation proteins 11
Calcium ATPase, transduction domain A Metal cation-transporting ATPase, ATP-binding domain N 11
Tex N-terminal region-like Ribonuclease H-like 11
Homeodomain-like Probable bacterial effector-binding domain 11
RuBisCO, large subunit, small (N-terminal) domain RuBisCo, C-terminal domain 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
NAD(P)-binding Rossmann-fold domains Aldolase 11
vWA-like vWA-like 11
DNA ligase/mRNA capping enzyme, catalytic domain RuvA domain 2-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 11
Class II aaRS and biotin synthetases SufE/NifU 11
FAD/NAD-linked reductases, dimerisation (C-terminal) domain SirA-like 11
Homocysteine S-methyltransferase Dihydropteroate synthetase-like 11
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 11
Methionine synthase domain Methionine synthase activation domain-like 11
Molybdenum cofactor biosynthesis proteins CinA-like 11
Macro domain-like Zn-dependent exopeptidases 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
E set domains (Trans)glycosidases 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Nucleic acid-binding proteins 11
HMA, heavy metal-associated domain FAD/NAD(P)-binding domain 11
Tryptophan synthase beta subunit-like PLP-dependent enzymes ACT-like 11
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 11
Nucleotide-diphospho-sugar transferases Phosphoglucomutase, C-terminal domain 11
PPK N-terminal domain-like PHP14-like 11
CheY-binding domain of CheA Homodimeric domain of signal transducing histidine kinase 11
Nucleotidylyl transferase Ribosomal protein L25-like 11
Sensory domain-like Nucleotide cyclase 11
Chaperone J-domain HSP40/DnaJ peptide-binding domain 11
Acyl-CoA N-acyltransferases (Nat) Acyl-CoA N-acyltransferases (Nat) 11
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 11
Homodimeric domain of signal transducing histidine kinase CheW-like 11
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 11
Zinc beta-ribbon DNA primase core 11
Cystatin/monellin Cystatin/monellin 11
Nitrite and sulphite reductase 4Fe-4S domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Eukaryotic type KH-domain (KH-domain type I) 11
P-loop containing nucleoside triphosphate hydrolases Hypothetical protein YjiA, C-terminal domain 11
Nucleotidylyl transferase tRNA-binding arm 11
GreA transcript cleavage protein, N-terminal domain FKBP-like 11
GroEL equatorial domain-like GroEL equatorial domain-like 11
PreATP-grasp domain post-HMGL domain-like 11
Flavoproteins Riboflavin synthase domain-like 11
Zinc beta-ribbon Prokaryotic SH3-related domain 11
CBS-domain pair Nucleotidyltransferase 11
"Winged helix" DNA-binding domain PLP-dependent transferases 11
PUA domain-like Nucleotidylyl transferase 11
Flavoproteins Ferredoxin reductase-like, C-terminal NADP-linked domain 11
NAD(P)-binding Rossmann-fold domains Homeodomain-like 11
GIY-YIG endonuclease RuvA domain 2-like 11
Oxidoreductase molybdopterin-binding domain E set domains 11
Homocysteine S-methyltransferase Methionine synthase domain 11
FMN-linked oxidoreductases Alpha subunit of glutamate synthase, C-terminal domain 11
TPR-like (Trans)glycosidases 11
Elongation factor Ts (EF-Ts), dimerisation domain Elongation factor Ts (EF-Ts), dimerisation domain 11
Class II aaRS and biotin synthetases YbaK/ProRS associated domain 11
HprK N-terminal domain-like CBS-domain pair 11
THUMP domain-like Adenine nucleotide alpha hydrolases-like 11
GIY-YIG endonuclease C-terminal UvrC-binding domain of UvrB 11
PK beta-barrel domain-like Phosphohistidine domain 11
Formate/glycerate dehydrogenase catalytic domain-like ACT-like 11
Glutathione synthetase ATP-binding domain-like Succinyl-CoA synthetase domains 11
DPP6 N-terminal domain-like alpha/beta-Hydrolases 11
TGS-like Class II aaRS ABD-related 11
Cobalamin (vitamin B12)-binding domain P-loop containing nucleoside triphosphate hydrolases 11
a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Cytochrome c 11
Protein kinase-like (PK-like) Penicillin-binding protein 2x (pbp-2x), c-terminal domain 11
Concanavalin A-like lectins/glucanases Galactose-binding domain-like 11
HAMP domain-like HD-domain/PDEase-like 11
P-loop containing nucleoside triphosphate hydrolases SMR domain-like 11
R1 subunit of ribonucleotide reductase, N-terminal domain PFL-like glycyl radical enzymes 11
Heme-dependent peroxidases Heme-dependent peroxidases 11
PUA domain-like S-adenosyl-L-methionine-dependent methyltransferases 11
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 11
Globin-like Riboflavin synthase domain-like 11
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 11
2Fe-2S ferredoxin-like alpha-helical ferredoxin 11
"Winged helix" DNA-binding domain Iron-dependent repressor protein, dimerization domain 11
Prokaryotic type KH domain (KH-domain type II) Prokaryotic type KH domain (KH-domain type II) 11
Eukaryotic type KH-domain (KH-domain type I) HD-domain/PDEase-like 11
HD-domain/PDEase-like Nucleotidyltransferase 11
Putative DNA-binding domain Anticodon-binding domain of PheRS 11
DeoB insert domain-like Alkaline phosphatase-like 11
Periplasmic binding protein-like II PYP-like sensor domain (PAS domain) 11
Rudiment single hybrid motif Aldolase 11
6-phosphogluconate dehydrogenase C-terminal domain-like ACT-like 11
P-loop containing nucleoside triphosphate hydrolases C-terminal UvrC-binding domain of UvrB 11
Formyltransferase FMT C-terminal domain-like 11
LysM domain LysM domain 11
Formate/glycerate dehydrogenase catalytic domain-like Serine metabolism enzymes domain 11
Arabinanase/levansucrase/invertase Concanavalin A-like lectins/glucanases 11
ABC transporter involved in vitamin B12 uptake, BtuC ABC transporter involved in vitamin B12 uptake, BtuC 11
CheY-binding domain of CheA ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Cytochrome c oxidase subunit II-like, transmembrane region Cytochrome c 11
Translation proteins Initiation factor IF2/eIF5b, domain 3 11
PreATP-grasp domain Single hybrid motif 11
Voltage-gated potassium channels NAD(P)-binding Rossmann-fold domains 11
NAD(P)-binding Rossmann-fold domains Serine metabolism enzymes domain 11
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
MoeA N-terminal region -like MoeA C-terminal domain-like 11
PK beta-barrel domain-like PK C-terminal domain-like 11
"Winged helix" DNA-binding domain Putative transcriptional regulator TM1602, C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases Rad50 coiled-coil Zn hook 11
Tex N-terminal region-like RuvA domain 2-like 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
PIN domain-like P-loop containing nucleoside triphosphate hydrolases 11
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 11
FAD/NAD(P)-binding domain Rhodanese/Cell cycle control phosphatase 11
Trigger factor ribosome-binding domain FKBP-like 11
(Trans)glycosidases Beta-D-glucan exohydrolase, C-terminal domain 11
PEP carboxykinase N-terminal domain PEP carboxykinase-like 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 11
TGS-like Class II aaRS and biotin synthetases 11
Nucleic acid-binding proteins Anticodon-binding domain of PheRS 11
DNA repair protein MutS, domain III SMR domain-like 11
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 11
"Winged helix" DNA-binding domain HprK N-terminal domain-like 11
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 11
TGS-like ThrRS/AlaRS common domain 11
Riboflavin synthase domain-like Riboflavin synthase domain-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Nucleotide-diphospho-sugar transferases 11
Trimeric LpxA-like enzymes Phosphoglucomutase, C-terminal domain 11
DHH phosphoesterases CBS-domain pair 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
NAD(P)-binding Rossmann-fold domains Glutamyl tRNA-reductase dimerization domain 11
5' to 3' exonuclease, C-terminal subdomain DNA/RNA polymerases 11
Histidine-containing phosphotransfer domain, HPT domain Homodimeric domain of signal transducing histidine kinase 11
Ferritin-like RmlC-like cupins 11
Ribonuclease H-like DNA/RNA polymerases 11
Nitrite/Sulfite reductase N-terminal domain-like Nitrite/Sulfite reductase N-terminal domain-like 11
GAF domain-like PYP-like sensor domain (PAS domain) 11
PreATP-grasp domain Aldolase 11
2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain Alkaline phosphatase-like 11
PGBD-like Barwin-like endoglucanases 11
Phospholipase D/nuclease P-loop containing nucleoside triphosphate hydrolases 11
Penicillin-binding protein 2x (pbp-2x), c-terminal domain Penicillin-binding protein 2x (pbp-2x), c-terminal domain 11
PHP14-like Phospholipase D/nuclease 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FMN-linked oxidoreductases 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
YhbC-like, N-terminal domain YhbC-like, C-terminal domain 11
Hypothetical protein SAV1430 ARM repeat 11
FAD/NAD-linked reductases, dimerisation (C-terminal) domain Rhodanese/Cell cycle control phosphatase 11
GroEL equatorial domain-like GroEL apical domain-like 11
MetI-like Periplasmic binding protein-like II 11
NAD(P)-binding Rossmann-fold domains P-loop containing nucleoside triphosphate hydrolases 11
PIN domain-like Ribonuclease H-like 11
Methylglyoxal synthase-like Cytidine deaminase-like 11
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 11
Trimeric LpxA-like enzymes Phosphoglucomutase, first 3 domains 11
Acylphosphatase/BLUF domain-like Actin-like ATPase domain 11
Epsilon subunit of F1F0-ATP synthase N-terminal domain Epsilon subunit of F1F0-ATP synthase C-terminal domain 11
Sensory domain-like HAMP domain-like 11
Resolvase-like Homeodomain-like 11
Nucleic acid-binding proteins GAD domain-like 11
PheT/TilS domain Putative DNA-binding domain 11
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Alpha subunit of glutamate synthase, C-terminal domain 11
Voltage-gated potassium channels TrkA C-terminal domain-like 11
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
UbiD C-terminal domain-like UbiD C-terminal domain-like 11
PYP-like sensor domain (PAS domain) CheY-like 11
DHH phosphoesterases Poly A polymerase C-terminal region-like 11
GAF domain-like GAF domain-like 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphohistidine domain 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
PDZ domain-like Ribosomal protein S5 domain 2-like 11
Aconitase iron-sulfur domain LeuD/IlvD-like 11
NAD(P)-binding Rossmann-fold domains Siroheme synthase middle domains-like 11
alpha/beta-Hydrolases alpha/beta-Hydrolases 11
Homodimeric domain of signal transducing histidine kinase CheY-like 11
P-loop containing nucleoside triphosphate hydrolases TPR-like 11
PreATP-grasp domain Methylglyoxal synthase-like 11
NAD(P)-binding Rossmann-fold domains ClpP/crotonase 11
Cupredoxins Cytochrome c 11
AbrB/MazE/MraZ-like AbrB/MazE/MraZ-like 11
Histidine-containing phosphotransfer domain, HPT domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Dihydropteroate synthetase-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
YojJ-like RuvA domain 2-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
Pyruvate-ferredoxin oxidoreductase, PFOR, domain III TK C-terminal domain-like 11
"Winged helix" DNA-binding domain HRDC-like 11
HD-domain/PDEase-like TGS-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain ACT-like 11
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 11
PheT/TilS domain Class II aaRS and biotin synthetases 11
(Trans)glycosidases Copper amine oxidase, domain N 11
RuvA domain 2-like JAB1/MPN domain 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 11
Eukaryotic type KH-domain (KH-domain type I) Nucleic acid-binding proteins 11
S13-like H2TH domain Glucocorticoid receptor-like (DNA-binding domain) 11
Pyruvate-ferredoxin oxidoreductase, PFOR, domain III Thiamin diphosphate-binding fold (THDP-binding) 11
CBS-domain pair Thioesterase/thiol ester dehydrase-isomerase 11
cAMP-binding domain-like "Winged helix" DNA-binding domain 11
Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 11
Transcription factor NusA, N-terminal domain Nucleic acid-binding proteins 11
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 11
NAD(P)-binding Rossmann-fold domains PYP-like sensor domain (PAS domain) 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphoenolpyruvate/pyruvate domain 11
Cobalamin (vitamin B12)-binding domain Methionine synthase activation domain-like 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
"Winged helix" DNA-binding domain PTS-regulatory domain, PRD 11
DNA-glycosylase Nudix 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
Glutathione synthetase ATP-binding domain-like post-HMGL domain-like 11
Glutathione synthetase ATP-binding domain-like Aldolase 11
P-loop containing nucleoside triphosphate hydrolases CBS-domain pair 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 11
L9 N-domain-like Ribosomal protein L9 C-domain 11
Histidine-containing phosphotransfer domain, HPT domain CheW-like 11
Invasin/intimin cell-adhesion fragments Beta-D-glucan exohydrolase, C-terminal domain 11
CBS-domain pair Poly A polymerase C-terminal region-like 11
Rudiment single hybrid motif Single hybrid motif 11
Glutamyl tRNA-reductase catalytic, N-terminal domain Glutamyl tRNA-reductase dimerization domain 11
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Pyrimidine nucleoside phosphorylase C-terminal domain 11
Acyl-CoA N-acyltransferases (Nat) SCP-like 11
PK C-terminal domain-like Phosphohistidine domain 11
PDZ domain-like PGBD-like 11
DNA polymerase beta, N-terminal domain-like PHP domain-like 11
Chemotaxis receptor methyltransferase CheR, N-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
YajQ-like YajQ-like 11
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 11
Putative DNA-binding domain Cobalamin (vitamin B12)-binding domain 11
MFS general substrate transporter MFS general substrate transporter 11
LysM domain PR-1-like 11
N-terminal domain of MutM-like DNA repair proteins Glucocorticoid receptor-like (DNA-binding domain) 11
Dihydropteroate synthetase-like Cobalamin (vitamin B12)-binding domain 11
GAF domain-like Nucleotide cyclase 11
EspE N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain "Winged helix" DNA-binding domain 11
Acyl-CoA N-acyltransferases (Nat) Carbon-nitrogen hydrolase 11
Molybdenum cofactor biosynthesis proteins MoeA C-terminal domain-like 11
Rudiment single hybrid motif post-HMGL domain-like 11
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 11
cAMP-binding domain-like CBS-domain pair 11
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 11
Ribonuclease PH domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
UROD/MetE-like UROD/MetE-like 11
DnaK suppressor protein DksA, alpha-hairpin domain Glucocorticoid receptor-like (DNA-binding domain) 11
Histidine-containing phosphotransfer domain, HPT domain CheY-like 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
Ribonuclease H-like P-loop containing nucleoside triphosphate hydrolases 11
MetI-like MetI-like 11
CheY-like CheY-like 11
Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Pyrimidine nucleoside phosphorylase C-terminal domain 11
RuvA domain 2-like DNA helicase RuvA subunit, C-terminal domain 11
Cytidine deaminase-like Dihydrofolate reductase-like 11
Carboxypeptidase regulatory domain-like Carboxypeptidase regulatory domain-like 11
Translation proteins "Winged helix" DNA-binding domain 11
Carbamate kinase-like PUA domain-like 11
P-loop containing nucleoside triphosphate hydrolases Smc hinge domain 11
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 11
PYP-like sensor domain (PAS domain) SpoIIaa-like 11
6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheW-like 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
EAL domain-like Sensory domain-like 11
MoeA N-terminal region -like Molybdenum cofactor biosynthesis proteins 11
Aldolase Single hybrid motif 11
Glutamyl tRNA-reductase catalytic, N-terminal domain NAD(P)-binding Rossmann-fold domains 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
Periplasmic binding protein-like II Homodimeric domain of signal transducing histidine kinase 11
HprK N-terminal domain-like Thioesterase/thiol ester dehydrase-isomerase 11
DHH phosphoesterases Nucleotidyltransferase 11
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 11
FMN-linked oxidoreductases 4Fe-4S ferredoxins 11
Cobalamin (vitamin B12)-binding domain Radical SAM enzymes 11
Hsp33 domain HSP33 redox switch-like 11
"Winged helix" DNA-binding domain C-terminal domain of arginine repressor 11
YrdC/RibB RibA-like 11
Homocysteine S-methyltransferase Cobalamin (vitamin B12)-binding domain 11
Actin-like ATPase domain HD-domain/PDEase-like 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
Adenine nucleotide alpha hydrolases-like MesJ substrate recognition domain-like 11
C-terminal UvrC-binding domain of UvrB RuvA domain 2-like 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
Putative DNA-binding domain Antibiotic binding domain of TipA-like multidrug resistance regulators 11
MalF N-terminal region-like MetI-like 11
AbrB/MazE/MraZ-like GAF domain-like 11
"Winged helix" DNA-binding domain NAD(P)-binding Rossmann-fold domains 11
Glycoside hydrolase/deacetylase Families 57/38 glycoside transferase middle domain 11
P-loop containing nucleoside triphosphate hydrolases TGS-like 11
FAD/NAD(P)-binding domain HI0933 insert domain-like 11
Alpha-L RNA-binding motif S-adenosyl-L-methionine-dependent methyltransferases 11
post-HMGL domain-like Single hybrid motif 11
HMA, heavy metal-associated domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 11
Nucleotide-binding domain ISP domain 11
CheY-like Methylesterase CheB, C-terminal domain 11
TPR-like Copper amine oxidase, domain N 11
PH0987 N-terminal domain-like Cyclophilin-like 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 11
Thioredoxin-like Thioredoxin-like 11
HisI-like all-alpha NTP pyrophosphatases 11
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
Invasin/intimin cell-adhesion fragments (Trans)glycosidases 11
FAD/NAD(P)-binding domain SirA-like 11
Heme-dependent catalase-like Class I glutamine amidotransferase-like 11
Class II aaRS and biotin synthetases GAD domain-like 11
"Winged helix" DNA-binding domain PRTase-like 11
"Winged helix" DNA-binding domain Phoshotransferase/anion transport protein 11
Nucleotide-diphospho-sugar transferases Phosphoglucomutase, first 3 domains 11
ACT-like Formyltransferase 11
Homing endonucleases Homing endonucleases 11
6-phosphogluconate dehydrogenase C-terminal domain-like ClpP/crotonase 11
Translation proteins Ribosomal protein S5 domain 2-like 11
Tetrapyrrole methylase all-alpha NTP pyrophosphatases 11
"Winged helix" DNA-binding domain C-terminal domain of transcriptional repressors 11
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 11
PUA domain-like alpha/beta knot 11
"Winged helix" DNA-binding domain PTS system IIB component-like 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
4Fe-4S ferredoxins ARM repeat 11
Nucleic acid-binding proteins HD-domain/PDEase-like 11
"Winged helix" DNA-binding domain LexA/Signal peptidase 11
Respiratory nitrate reductase 1 gamma chain alpha-helical ferredoxin 11
Zinc beta-ribbon N-terminal domain of DnaB helicase 11
Nucleotidyltransferase ACT-like 11
ISP domain Bet v1-like 11
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 11
Cryptochrome/photolyase, N-terminal domain Cryptochrome/photolyase FAD-binding domain 11
P-loop containing nucleoside triphosphate hydrolases Cobalamin (vitamin B12)-dependent enzymes 11
Globin-like Ferredoxin reductase-like, C-terminal NADP-linked domain 11
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 11
Translation proteins Translation proteins 11
HAMP domain-like Methyl-accepting chemotaxis protein (MCP) signaling domain 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Nucleic acid-binding proteins 11
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 11
Class I glutamine amidotransferase-like LD-carboxypeptidase A C-terminal domain-like 11
Nucleic acid-binding proteins BRCT domain 11
NagB/RpiA/CoA transferase-like alpha-helical ferredoxin 11
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 11
RNase III domain-like dsRNA-binding domain-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Caspase-like 11
Nucleotidylyl transferase Riboflavin kinase-like 11
"Winged helix" DNA-binding domain Class II aaRS and biotin synthetases 11
TGS-like ACT-like 11
Periplasmic binding protein-like II ACT-like 11
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 11
YbaK/ProRS associated domain Class II aaRS ABD-related 11
Galactose-binding domain-like Galactose-binding domain-like 11
Obg GTP-binding protein N-terminal domain Obg GTP-binding protein C-terminal domain 11
Acylphosphatase/BLUF domain-like YrdC/RibB 11
P-loop containing nucleoside triphosphate hydrolases HRDC-like 11
MesJ substrate recognition domain-like PheT/TilS domain 11
Families 57/38 glycoside transferase middle domain UDP-Glycosyltransferase/glycogen phosphorylase 11
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 11
NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains 11
Ribonuclease H-like RuvA domain 2-like 11
Rho N-terminal domain-like Nucleic acid-binding proteins 11
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 11
HD-domain/PDEase-like ACT-like 11
Methylated DNA-protein cysteine methyltransferase domain Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
DNA primase core N-terminal domain of DnaB helicase 11
ClpP/crotonase PGBD-like 11
CheY-binding domain of CheA CheW-like 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
Glucose permease domain IIB Duplicated hybrid motif 11
Prokaryotic type I DNA topoisomerase Zinc beta-ribbon 11
RuvA domain 2-like RuvA domain 2-like 11
LysM domain (Trans)glycosidases 11
Periplasmic binding protein-like II ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
P-loop containing nucleoside triphosphate hydrolases TrpR-like 11

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