SUPERFAMILY 1.75 HMM library and genome assignments server

Domain combination pairs in Thiomonas arsenitoxydans

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

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Adjacent domain pairs graph

Graph of adjacent domain pairs.


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Domain combination pairs

687 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 3116
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 218
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 174
"Winged helix" DNA-binding domain Periplasmic binding protein-like II 161
Nucleotide cyclase EAL domain-like 1512
CheY-like C-terminal effector domain of the bipartite response regulators 141
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 133
Actin-like ATPase domain Actin-like ATPase domain 123
PYP-like sensor domain (PAS domain) Nucleotide cyclase 129
Cytochrome c Cytochrome c 126
cAMP-binding domain-like "Winged helix" DNA-binding domain 113
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 105
Calcium ATPase, transduction domain A HAD-like 105
HAD-like Calcium ATPase, transmembrane domain M 105
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 93
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 94
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 95
Composite domain of metallo-dependent hydrolases Metallo-dependent hydrolases 96
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 94
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 83
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 83
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB transmembrane domain 83
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB transmembrane domain 83
P-loop containing nucleoside triphosphate hydrolases Translation proteins 86
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 84
Formate dehydrogenase/DMSO reductase, domains 1-3 ADC-like 84
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 84
Thiolase-like Thiolase-like 81
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 83
PYP-like sensor domain (PAS domain) PYP-like sensor domain (PAS domain) 75
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 74
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 75
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 76
Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase C-terminal domain-like 73
CheY-like Homeodomain-like 73
GAF domain-like Globin-like 66
GAF domain-like Nucleotide cyclase 66
HAMP domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 63
Thioredoxin-like GST C-terminal domain-like 62
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 61
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 63
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 66
PreATP-grasp domain Rudiment single hybrid motif 63
Globin-like EAL domain-like 66
PYP-like sensor domain (PAS domain) EAL domain-like 66
GAF domain-like EAL domain-like 66
P-loop containing nucleoside triphosphate hydrolases MOP-like 51
FKBP-like Triger factor/SurA peptide-binding domain-like 55
HAMP domain-like Homodimeric domain of signal transducing histidine kinase 52
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 54
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 53
Rhodanese/Cell cycle control phosphatase Rhodanese/Cell cycle control phosphatase 52
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 53
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 53
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 54
HMA, heavy metal-associated domain HAD-like 53
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 53
Nucleotide cyclase Globin-like 55
DNA methylase specificity domain DNA methylase specificity domain 51
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 52
GAF domain-like GAF domain-like 55
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 53
CheY-like P-loop containing nucleoside triphosphate hydrolases 51
Galactose mutarotase-like E set domains 42
"Winged helix" DNA-binding domain Dimeric alpha+beta barrel 41
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 42
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 42
ACT-like ACT-like 44
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 43
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 43
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein S5 domain 2-like 44
Cupredoxins Cupredoxins 43
Alpha-L RNA-binding motif Pseudouridine synthase 42
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 44
PurM N-terminal domain-like PurM C-terminal domain-like 42
Homeodomain-like Tetracyclin repressor-like, C-terminal domain 41
EspE N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 44
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 44
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 42
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 42
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 31
HD-domain/PDEase-like ACT-like 32
MurCD N-terminal domain MurD-like peptide ligases, catalytic domain 31
Phospholipase D/nuclease Phospholipase D/nuclease 33
Oxidoreductase molybdopterin-binding domain E set domains 31
Single hybrid motif CoA-dependent acyltransferases 33
2Fe-2S ferredoxin-like Ferredoxin reductase-like, C-terminal NADP-linked domain 32
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 33
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 31
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 33
Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), C-terminal domain 32
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 31
2Fe-2S ferredoxin-like Riboflavin synthase domain-like 32
GroES-like NAD(P)-binding Rossmann-fold domains 31
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 31
Sm-like ribonucleoproteins Mechanosensitive channel protein MscS (YggB), C-terminal domain 32
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 31
Homeodomain-like Homeodomain-like 32
"Winged helix" DNA-binding domain GAF domain-like 31
PYP-like sensor domain (PAS domain) Globin-like 33
GAF domain-like P-loop containing nucleoside triphosphate hydrolases 33
Acetyl-CoA synthetase-like ACP-like 33
PYP-like sensor domain (PAS domain) GAF domain-like 33
EF-G C-terminal domain-like EF-G C-terminal domain-like 33
Trypsin-like serine proteases PDZ domain-like 32
Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 32
MurCD N-terminal domain MurD-like peptide ligases, peptide-binding domain 31
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheW-like 32
Nucleic acid-binding proteins RuvA domain 2-like 33
Nucleotidyltransferase HD-domain/PDEase-like 32
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 32
MoeA N-terminal region -like Molybdenum cofactor biosynthesis proteins 31
HlyD-like secretion proteins HlyD-like secretion proteins 32
Molybdenum cofactor biosynthesis proteins MoeA C-terminal domain-like 31
Nucleic acid-binding proteins Nucleic acid-binding proteins 33
ACP-like ACP-like 33
Histidine-containing phosphotransfer domain, HPT domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 32
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 32
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 32
Nucleotidyltransferase ACT-like 32
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 31
Regulatory protein AraC Homeodomain-like 32
Translation proteins EF-G C-terminal domain-like 33
Enolase N-terminal domain-like Enolase C-terminal domain-like 31
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 32
6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 32
Histidine-containing phosphotransfer domain, HPT domain CheW-like 32
Class II aaRS and biotin synthetases Class II aaRS ABD-related 33
MoeA N-terminal region -like MoeA C-terminal domain-like 31
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 33
Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases 22
Single hybrid motif Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 22
RuBisCO, large subunit, small (N-terminal) domain RuBisCo, C-terminal domain 21
Methylated DNA-protein cysteine methyltransferase domain Methylated DNA-protein cysteine methyltransferase, C-terminal domain 21
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 21
6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 21
PreATP-grasp domain Single hybrid motif 22
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 22
HCP-like HCP-like 21
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 22
2Fe-2S ferredoxin-like 4Fe-4S ferredoxins 21
Folate-binding domain Aminomethyltransferase beta-barrel domain 21
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Adenine nucleotide alpha hydrolases-like 21
NAD(P)-binding Rossmann-fold domains UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 21
2Fe-2S ferredoxin-like ADC-like 21
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
L30e-like alpha/beta knot 21
E set domains (Trans)glycosidases 22
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 21
YgfB-like Sec-C motif 21
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 22
Lysozyme-like beta-lactamase/transpeptidase-like 22
Nucleotidyltransferase TGS-like 21
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 22
alpha-helical ferredoxin Nucleotide-binding domain 22
Glutathione synthetase ATP-binding domain-like Single hybrid motif 22
HMA, heavy metal-associated domain FAD/NAD(P)-binding domain 21
Translation proteins SH3-like domain Nucleic acid-binding proteins 22
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 21
Nqo1 FMN-binding domain-like Nqo1 middle domain-like 22
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
GAF domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 22
CoA-dependent acyltransferases ACP-like 22
ParB/Sulfiredoxin S-adenosyl-L-methionine-dependent methyltransferases 21
Nucleotidyltransferase Poly A polymerase C-terminal region-like 22
ParB/Sulfiredoxin KorB DNA-binding domain-like 21
CheW-like CheY-like 22
(Trans)glycosidases Glycosyl hydrolase domain 22
MetI-like MetI-like 21
P-loop containing nucleoside triphosphate hydrolases Restriction endonuclease-like 22
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 21
TGS-like ACT-like 21
HMA, heavy metal-associated domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 21
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 21
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 22
"Winged helix" DNA-binding domain PLP-dependent transferases 21
CoA-dependent acyltransferases Acetyl-CoA synthetase-like 22
2Fe-2S ferredoxin-like Formate dehydrogenase/DMSO reductase, domains 1-3 21
CoA-dependent acyltransferases CoA-dependent acyltransferases 22
ThrRS/AlaRS common domain Class II aaRS and biotin synthetases 22
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 22
PDZ domain-like PDZ domain-like 21
Cryptochrome/photolyase, N-terminal domain Cryptochrome/photolyase FAD-binding domain 21
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 22
Formyltransferase FMT C-terminal domain-like 21
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex CoA-dependent acyltransferases 22
ClpP/crotonase ClpP/crotonase 21
ISP domain Bet v1-like 21
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 22
4Fe-4S ferredoxins ADC-like 21
Nqo1 middle domain-like Nqo1C-terminal domain-like 22
"Winged helix" DNA-binding domain Chorismate lyase-like 21
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 22
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 21
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphoenolpyruvate/pyruvate domain 22
Histidine-containing phosphotransfer domain, HPT domain Homodimeric domain of signal transducing histidine kinase 21
Nqo1 FMN-binding domain-like Nqo1C-terminal domain-like 22
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 21
DnaK suppressor protein DksA, alpha-hairpin domain Glucocorticoid receptor-like (DNA-binding domain) 21
PLP-binding barrel Alanine racemase C-terminal domain-like 22
HD-domain/PDEase-like TGS-like 21
4Fe-4S ferredoxins Formate dehydrogenase/DMSO reductase, domains 1-3 21
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 21
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 22
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphohistidine domain 22
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 21
Nqo5-like HydB/Nqo4-like 21
Glutathione synthetase ATP-binding domain-like Phosphoenolpyruvate/pyruvate domain 21
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 22
TPR-like TPR-like 22
E set domains Glycosyl hydrolase domain 22
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 22
"Winged helix" DNA-binding domain GntR ligand-binding domain-like 21
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 22
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 21
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 22
Nucleotidyltransferase Nucleotidyltransferase substrate binding subunit/domain 22
tRNA-binding arm Class II aaRS and biotin synthetases 21
Chaperone J-domain HSP40/DnaJ peptide-binding domain 22
GAF domain-like Homeodomain-like 22
Homodimeric domain of signal transducing histidine kinase CheW-like 21
GreA transcript cleavage protein, N-terminal domain FKBP-like 21
Penicillin binding protein dimerisation domain beta-lactamase/transpeptidase-like 22
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 21
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 22
Rudiment single hybrid motif Single hybrid motif 22
Ribokinase-like Thiamin phosphate synthase 11
Voltage-gated potassium channels NAD(P)-binding Rossmann-fold domains 11
Protein kinase-like (PK-like) P-loop containing nucleoside triphosphate hydrolases 11
TATA-box binding protein-like DNA-glycosylase 11
Rad51 N-terminal domain-like Rad51 N-terminal domain-like 11
ADC synthase D-aminoacid aminotransferase-like PLP-dependent enzymes 11
Tex N-terminal region-like Nucleic acid-binding proteins 11
MFS general substrate transporter MFS general substrate transporter 11
PLP-dependent transferases PLP-dependent transferases 11
N-terminal domain of MutM-like DNA repair proteins Glucocorticoid receptor-like (DNA-binding domain) 11
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 11
Tryptophan synthase beta subunit-like PLP-dependent enzymes ACT-like 11
Homeodomain-like DNA-glycosylase 11
2Fe-2S ferredoxin-like FAD-binding/transporter-associated domain-like 11
PLP-dependent transferases Ornithine decarboxylase C-terminal domain 11
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 11
Cobalamin (vitamin B12)-binding domain Methionine synthase activation domain-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FMN-linked oxidoreductases 11
DNA ligase/mRNA capping enzyme, catalytic domain RuvA domain 2-like 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
Bacterial muramidases Lysozyme-like 11
Metal cation-transporting ATPase, ATP-binding domain N Calcium ATPase, transmembrane domain M 11
YbaK/ProRS associated domain Class II aaRS ABD-related 11
GroEL equatorial domain-like GroEL-intermediate domain like 11
Phoshotransferase/anion transport protein HPr-like 11
CarD-like TRCF domain-like 11
L9 N-domain-like Ribosomal protein L9 C-domain 11
Adenine nucleotide alpha hydrolases-like MesJ substrate recognition domain-like 11
Acetyl-CoA synthetase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 11
Prokaryotic type KH domain (KH-domain type II) Prokaryotic type KH domain (KH-domain type II) 11
3-carboxy-cis,cis-mucoante lactonizing enzyme Alkaline phosphatase-like 11
Periplasmic binding protein-like II Cytochrome c 11
Nucleotidyltransferase Nucleotidyltransferase 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
N-terminal domain of bifunctional PutA protein FAD-linked oxidoreductase 11
P-loop containing nucleoside triphosphate hydrolases TGS-like 11
Class II aaRS and biotin synthetases Translation proteins 11
Aldehyde ferredoxin oxidoreductase, N-terminal domain Aldehyde ferredoxin oxidoreductase, C-terminal domains 11
4Fe-4S ferredoxins Ferredoxin reductase-like, C-terminal NADP-linked domain 11
YVTN repeat-like/Quinoprotein amine dehydrogenase 3-carboxy-cis,cis-mucoante lactonizing enzyme 11
HAMP domain-like PYP-like sensor domain (PAS domain) 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 11
Leukotriene A4 hydrolase N-terminal domain Metalloproteases ("zincins"), catalytic domain 11
5' to 3' exonuclease, C-terminal subdomain Ribonuclease H-like 11
Aldolase post-HMGL domain-like 11
Single hybrid motif FAD/NAD-linked reductases, dimerisation (C-terminal) domain 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
HAMP domain-like GAF domain-like 11
Ribosomal protein L6 Ribosomal protein L6 11
Nucleic acid-binding proteins GAD domain-like 11
YbjQ-like YbjQ-like 11
Ribbon-helix-helix FAD-linked oxidoreductase 11
Thioesterase/thiol ester dehydrase-isomerase Isocitrate/Isopropylmalate dehydrogenase-like 11
Aminoacid dehydrogenase-like, N-terminal domain Isocitrate/Isopropylmalate dehydrogenase-like 11
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Putative DNA-binding domain Anticodon-binding domain of PheRS 11
Cytochrome c oxidase subunit II-like, transmembrane region Cupredoxins 11
HAMP domain-like EAL domain-like 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
"Winged helix" DNA-binding domain Rhodanese/Cell cycle control phosphatase 11
Chorismate mutase II ACT-like 11
Ribonuclease H-like GIY-YIG endonuclease 11
RuvA domain 2-like JAB1/MPN domain 11
P-loop containing nucleoside triphosphate hydrolases CarD-like 11
TPR-like NTF2-like 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
Glucocorticoid receptor-like (DNA-binding domain) P-loop containing nucleoside triphosphate hydrolases 11
Aconitase iron-sulfur domain LeuD/IlvD-like 11
FAD-linked reductases, C-terminal domain 4Fe-4S ferredoxins 11
PUA domain-like S-adenosyl-L-methionine-dependent methyltransferases 11
2Fe-2S ferredoxin-like alpha-helical ferredoxin 11
DsbC/DsbG N-terminal domain-like Thioredoxin-like 11
DNA-glycosylase Nudix 11
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Alpha subunit of glutamate synthase, C-terminal domain 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
Thiolase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 11
P-loop containing nucleoside triphosphate hydrolases TrpR-like 11
YajQ-like YajQ-like 11
HAMP domain-like Nucleotide cyclase 11
RBP11-like subunits of RNA polymerase C-terminal domain of RNA polymerase alpha subunit 11
Ribbon-helix-helix ALDH-like 11
Acetyl-CoA synthetase-like FabD/lysophospholipase-like 11
Actin-like ATPase domain HD-domain/PDEase-like 11
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 11
Nucleic acid-binding proteins S-adenosyl-L-methionine-dependent methyltransferases 11
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 11
CheY-like Nucleotide cyclase 11
Rho N-terminal domain-like Nucleic acid-binding proteins 11
Nucleotide cyclase Nucleotide cyclase 11
CheC-like Surface presentation of antigens (SPOA) 11
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 11
N-terminal domain of DnaB helicase P-loop containing nucleoside triphosphate hydrolases 11
Nucleotidylyl transferase Nucleic acid-binding proteins 11
Putative DNA-binding domain Initiation factor IF2/eIF5b, domain 3 11
Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha) Thioredoxin-like 11
Class II aaRS and biotin synthetases GAD domain-like 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain ACT-like 11
GspK insert domain-like RuvA domain 2-like 11
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 11
Adenine nucleotide alpha hydrolases-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
GroEL-intermediate domain like GroEL apical domain-like 11
NAD(P)-binding Rossmann-fold domains ClpP/crotonase 11
HD-domain/PDEase-like HD-domain/PDEase-like 11
PurM C-terminal domain-like Class I glutamine amidotransferase-like 11
PYP-like sensor domain (PAS domain) Methyl-accepting chemotaxis protein (MCP) signaling domain 11
RuvA domain 2-like DNA helicase RuvA subunit, C-terminal domain 11
Ribonuclease H-like RuvA domain 2-like 11
TTHA1013/TTHA0281-like Ribbon-helix-helix 11
PIN domain-like DNA/RNA polymerases 11
Adenine nucleotide alpha hydrolases-like Adenine nucleotide alpha hydrolases-like 11
FAD/NAD(P)-binding domain 4Fe-4S ferredoxins 11
TGS-like Class II aaRS and biotin synthetases 11
PurS-like PurM C-terminal domain-like 11
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 11
Thioredoxin-like Dimeric alpha+beta barrel 11
PIN domain-like Ribonuclease H-like 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 11
TolB, N-terminal domain Tricorn protease N-terminal domain 11
PurS-like PurM N-terminal domain-like 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
Nucleic acid-binding proteins Putative DNA-binding domain 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
Epsilon subunit of F1F0-ATP synthase N-terminal domain Epsilon subunit of F1F0-ATP synthase C-terminal domain 11
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
6-phosphogluconate dehydrogenase C-terminal domain-like ClpP/crotonase 11
Metalloproteases ("zincins"), catalytic domain PDZ domain-like 11
FGAM synthase PurL, linker domain Class I glutamine amidotransferase-like 11
Tex N-terminal region-like Ribonuclease H-like 11
Barwin-like endoglucanases Sporulation related repeat 11
"Winged helix" DNA-binding domain LexA/Signal peptidase 11
NAD(P)-binding Rossmann-fold domains Glutamyl tRNA-reductase dimerization domain 11
lambda repressor-like DNA-binding domains Cyanase C-terminal domain 11
Cyclophilin-like PH0987 N-terminal domain-like 11
FMN-linked oxidoreductases 4Fe-4S ferredoxins 11
P-loop containing nucleoside triphosphate hydrolases HRDC-like 11
Histidine-containing phosphotransfer domain, HPT domain Histidine-containing phosphotransfer domain, HPT domain 11
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 11
Restriction endonuclease-like Class II aaRS and biotin synthetases 11
Thioredoxin-like Six-hairpin glycosidases 11
PheT/TilS domain Anticodon-binding domain of PheRS 11
Nitrite/Sulfite reductase N-terminal domain-like Nitrite/Sulfite reductase N-terminal domain-like 11
lambda repressor-like DNA-binding domains Periplasmic binding protein-like I 11
Nucleic acid-binding proteins DNA helicase RuvA subunit, C-terminal domain 11
Heme-dependent peroxidases Heme-dependent peroxidases 11
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 11
Putative DNA-binding domain P-loop containing nucleoside triphosphate hydrolases 11
Fe-S cluster assembly (FSCA) domain-like P-loop containing nucleoside triphosphate hydrolases 11
Aldolase AFP III-like domain 11
EPT/RTPC-like P-loop containing nucleoside triphosphate hydrolases 11
RmlC-like cupins Homeodomain-like 11
FAD-binding/transporter-associated domain-like Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain 11
Translation proteins Translation proteins 11
Methylglyoxal synthase-like Cytidine deaminase-like 11
PTS system IIB component-like PTS system IIB component-like 11
RuvA domain 2-like BRCT domain 11
EAL domain-like CBS-domain pair 11
Chorismate mutase II Periplasmic binding protein-like II 11
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 11
Carbon-nitrogen hydrolase Adenine nucleotide alpha hydrolases-like 11
HemD-like HemD-like 11
FGAM synthase PurL, linker domain PurM N-terminal domain-like 11
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 11
HPr-like Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 11
Nucleotidyltransferase substrate binding subunit/domain ACT-like 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 11
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 11
FabD/lysophospholipase-like PLP-dependent transferases 11
Homo-oligomeric flavin-containing Cys decarboxylases, HFCD CoaB-like 11
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 11
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 11
CBS-domain pair Nucleotide cyclase 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) DNA-glycosylase 11
lambda repressor-like DNA-binding domains P-loop containing nucleoside triphosphate hydrolases 11
Ribonuclease H-like DNA/RNA polymerases 11
CBS-domain pair PLP-dependent transferases 11
FAD/NAD(P)-binding domain Nitrite/Sulfite reductase N-terminal domain-like 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
HisI-like all-alpha NTP pyrophosphatases 11
PreATP-grasp domain PH0987 N-terminal domain-like 11
Thioredoxin-like Nqo1 middle domain-like 11
YjeF N-terminal domain-like Ribokinase-like 11
N-terminal domain of bifunctional PutA protein ALDH-like 11
P-loop containing nucleoside triphosphate hydrolases ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 11
FGAM synthase PurL, linker domain PurM C-terminal domain-like 11
GIY-YIG endonuclease RuvA domain 2-like 11
Single hybrid motif alpha/beta-Hydrolases 11
Nucleotidyltransferase substrate binding subunit/domain HD-domain/PDEase-like 11
PreATP-grasp domain Methylglyoxal synthase-like 11
Aspartate/glutamate racemase Aspartate/glutamate racemase 11
Cobalamin (vitamin B12)-binding domain P-loop containing nucleoside triphosphate hydrolases 11
Cyclophilin-like Cyclophilin-like 11
Phase 1 flagellin Phase 1 flagellin 11
Cytidine deaminase-like Dihydrofolate reductase-like 11
Translation proteins PRC-barrel domain 11
PurS-like Class I glutamine amidotransferase-like 11
NAD(P)-binding Rossmann-fold domains ACT-like 11
Rudiment single hybrid motif Cyclophilin-like 11
Adhesin YadA, collagen-binding domain Pili subunits 11
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 11
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 11
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 11
FKBP-like FKBP-like 11
Single hybrid motif FAD/NAD(P)-binding domain 11
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 11
Probable ACP-binding domain of malonyl-CoA ACP transacylase PLP-dependent transferases 11
PHP domain-like AF1531-like 11
Phoshotransferase/anion transport protein Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 11
FAD-binding/transporter-associated domain-like CO dehydrogenase flavoprotein C-terminal domain-like 11
PUA domain-like Ribosomal protein S5 domain 2-like 11
Nitrite and sulphite reductase 4Fe-4S domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 11
Ribonuclease PH domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 11
Acetyl-CoA synthetase-like Acetyl-CoA synthetase-like 11
P-loop containing nucleoside triphosphate hydrolases Nucleotide-diphospho-sugar transferases 11
Transcription factor NusA, N-terminal domain Prokaryotic type KH domain (KH-domain type II) 11
Thiolase-like FabD/lysophospholipase-like 11
Cyclophilin-like Single hybrid motif 11
PurS-like FGAM synthase PurL, linker domain 11
CO dehydrogenase ISP C-domain like CO dehydrogenase flavoprotein C-terminal domain-like 11
Rho N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
Restriction endonuclease-like C-terminal domain of transcriptional repressors 11
Nucleotidylyl transferase Ribosomal protein L25-like 11
Galactose mutarotase-like Six-hairpin glycosidases 11
HD-domain/PDEase-like Nucleotide cyclase 11
HD-domain/PDEase-like CheY-like 11
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 11
GAF domain-like Homodimeric domain of signal transducing histidine kinase 11
GIY-YIG endonuclease C-terminal UvrC-binding domain of UvrB 11
MurE/MurF N-terminal domain MurE/MurF N-terminal domain 11
Cobalamin (vitamin B12)-binding domain Cobalamin (vitamin B12)-dependent enzymes 11
Putative DNA-binding domain Translation proteins 11
Adenine nucleotide alpha hydrolases-like GAF domain-like 11
Eukaryotic type KH-domain (KH-domain type I) Nucleic acid-binding proteins 11
Dihydropteroate synthetase-like Cobalamin (vitamin B12)-binding domain 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 11
ACT-like Formyltransferase 11
FAD-linked oxidases, C-terminal domain alpha-helical ferredoxin 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
PheT/TilS domain Putative DNA-binding domain 11
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 11
Adenine nucleotide alpha hydrolases-like Homodimeric domain of signal transducing histidine kinase 11
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 11
P-loop containing nucleoside triphosphate hydrolases Adenine nucleotide alpha hydrolases-like 11
Dihydropteroate synthetase-like Methionine synthase domain 11
FAD/NAD(P)-binding domain HI0933 insert domain-like 11
YhbC-like, N-terminal domain YhbC-like, C-terminal domain 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Eukaryotic type KH-domain (KH-domain type I) 11
GroEL equatorial domain-like GroEL apical domain-like 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Nucleic acid-binding proteins 11
Trigger factor ribosome-binding domain FKBP-like 11
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleotidylyl transferase 11
PurM N-terminal domain-like Class I glutamine amidotransferase-like 11
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
PheT/TilS domain Class II aaRS and biotin synthetases 11
Carbamate kinase-like Acyl-CoA N-acyltransferases (Nat) 11
Homeodomain-like TATA-box binding protein-like 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) TATA-box binding protein-like 11
2Fe-2S ferredoxin-like CO dehydrogenase flavoprotein C-terminal domain-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 11
Thioredoxin-like Thioredoxin-like 11
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
Glutamine synthetase/guanido kinase GatB/YqeY motif 11
Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases 11
P-loop containing nucleoside triphosphate hydrolases CBS-domain pair 11
Chaperone J-domain HSC20 (HSCB), C-terminal oligomerisation domain 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase HSP90 C-terminal domain 11
FliG FliG 11
CBS-domain pair FAD-binding/transporter-associated domain-like 11
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 11
FAD-linked oxidoreductase ALDH-like 11
Class II aaRS and biotin synthetases YbaK/ProRS associated domain 11
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
Zinc beta-ribbon DNA primase DnaG, C-terminal domain 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
ACP-like PLP-dependent transferases 11
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 11
Rudiment single hybrid motif PH0987 N-terminal domain-like 11
Galactose mutarotase-like Galactose mutarotase-like 11
Translation proteins Initiation factor IF2/eIF5b, domain 3 11
EAL domain-like HD-domain/PDEase-like 11
Riboflavin synthase domain-like Riboflavin synthase domain-like 11
Phoshotransferase/anion transport protein Phosphoenolpyruvate/pyruvate domain 11
Transmembrane di-heme cytochromes a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 11
UraD-Like Zn-dependent exopeptidases 11
RuvA domain 2-like MCP/YpsA-like 11
Nucleic acid-binding proteins ArfGap/RecO-like zinc finger 11
Macro domain-like Zn-dependent exopeptidases 11
Ribosomal protein S5 domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
CO dehydrogenase molybdoprotein N-domain-like Molybdenum cofactor-binding domain 11
Transcription factor NusA, N-terminal domain Nucleic acid-binding proteins 11
PPK N-terminal domain-like PHP14-like 11
DinB/YfiT-like putative metalloenzymes C-type lectin-like 11
2Fe-2S ferredoxin-like CO dehydrogenase ISP C-domain like 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
FMN-binding split barrel UbiD C-terminal domain-like 11
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 11
4Fe-4S ferredoxins HydA/Nqo6-like 11
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 11
Nucleotide-binding domain Nucleotide-binding domain 11
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 11
HD-domain/PDEase-like GAF domain-like 11
Thiamin diphosphate-binding fold (THDP-binding) Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 11
PreATP-grasp domain Cyclophilin-like 11
GST C-terminal domain-like Dimeric alpha+beta barrel 11
Elongation factor Ts (EF-Ts), dimerisation domain Elongation factor Ts (EF-Ts), dimerisation domain 11
UraD-Like Bacterial exopeptidase dimerisation domain 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 11
ALDH-like Thioesterase/thiol ester dehydrase-isomerase 11
Nucleotidyltransferase substrate binding subunit/domain Nucleotidyltransferase substrate binding subunit/domain 11
MFS general substrate transporter Cytochrome c 11
Thioredoxin-like Nqo1 FMN-binding domain-like 11
HPr-like Phosphohistidine domain 11
P-loop containing nucleoside triphosphate hydrolases Cobalamin (vitamin B12)-dependent enzymes 11
C-terminal UvrC-binding domain of UvrB RuvA domain 2-like 11
HPr-like Phosphoenolpyruvate/pyruvate domain 11
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 11
Carbamate kinase-like PUA domain-like 11
RNase III domain-like dsRNA-binding domain-like 11
Nucleotidylyl transferase Riboflavin kinase-like 11
P-loop containing nucleoside triphosphate hydrolases Homodimeric domain of signal transducing histidine kinase 11
Class I glutamine amidotransferase-like LD-carboxypeptidase A C-terminal domain-like 11
4'-phosphopantetheinyl transferase 4'-phosphopantetheinyl transferase 11
ACP-like Thiolase-like 11
Fibronectin type III Fibronectin type III 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
Nucleotide cyclase SMAD/FHA domain 11
NAD(P)-binding Rossmann-fold domains Isocitrate/Isopropylmalate dehydrogenase-like 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11
beta-lactamase/transpeptidase-like Penicillin-binding protein associated domain 11
Ribosomal protein S5 domain 2-like HSP90 C-terminal domain 11
Nucleic acid-binding proteins Rad51 N-terminal domain-like 11
NagB/RpiA/CoA transferase-like D-ribose-5-phosphate isomerase (RpiA), lid domain 11
TGS-like Class II aaRS ABD-related 11
Zinc beta-ribbon P-loop containing nucleoside triphosphate hydrolases 11
Resolvase-like Homeodomain-like 11
PreATP-grasp domain PreATP-grasp domain 11
Ribbon-helix-helix N-terminal domain of bifunctional PutA protein 11
Histidine-containing phosphotransfer domain, HPT domain CheY-like 11
4Fe-4S ferredoxins Riboflavin synthase domain-like 11
Pheromone-binding domain of LuxR-like quorum-sensing transcription factors C-terminal effector domain of the bipartite response regulators 11
R1 subunit of ribonucleotide reductase, N-terminal domain PFL-like glycyl radical enzymes 11
ACP-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 11
Glutathione synthetase ATP-binding domain-like Cyclophilin-like 11
YegP-like YegP-like 11
ACP-like FabD/lysophospholipase-like 11
Metal cation-transporting ATPase, ATP-binding domain N HAD-like 11
Methionine synthase domain Cobalamin (vitamin B12)-binding domain 11
Dihydropteroate synthetase-like Methionine synthase activation domain-like 11
Nucleic acid-binding proteins Anticodon-binding domain of PheRS 11
Tex N-terminal region-like RuvA domain 2-like 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
Acetyl-CoA synthetase-like PLP-dependent transferases 11
PUA domain-like alpha/beta knot 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Nucleic acid-binding proteins 11
Domain of the SRP/SRP receptor G-proteins Signal peptide-binding domain 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) Homeodomain-like 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 11
Putative DNA-binding domain Cobalamin (vitamin B12)-binding domain 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
Calcium ATPase, transduction domain A Metal cation-transporting ATPase, ATP-binding domain N 11
RmlC-like cupins RmlC-like cupins 11
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 11
Adhesin YadA, collagen-binding domain Adhesin YadA, collagen-binding domain 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
HMA, heavy metal-associated domain HMA, heavy metal-associated domain 11
PDZ domain-like ClpP/crotonase 11
P-loop containing nucleoside triphosphate hydrolases UDP-Glycosyltransferase/glycogen phosphorylase 11
Nucleic acid-binding proteins BRCT domain 11
Class II aaRS and biotin synthetases C-terminal domain of transcriptional repressors 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
Acetyl-CoA synthetase-like Thiolase-like 11
FMN-linked oxidoreductases Alpha subunit of glutamate synthase, C-terminal domain 11
Glutathione synthetase ATP-binding domain-like PH0987 N-terminal domain-like 11
a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 11
Origin of replication-binding domain, RBD-like P-loop containing nucleoside triphosphate hydrolases 11
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
Transcription factor NusA, N-terminal domain Rad51 N-terminal domain-like 11
YVTN repeat-like/Quinoprotein amine dehydrogenase Alkaline phosphatase-like 11
E set domains E set domains 11
"Winged helix" DNA-binding domain S-adenosyl-L-methionine-dependent methyltransferases 11
Translation proteins ThrRS/AlaRS common domain 11
DNA primase core DNA primase DnaG, C-terminal domain 11
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 11
EF-G C-terminal domain-like Ribosomal protein S5 domain 2-like 11
TGS-like ThrRS/AlaRS common domain 11
Thioredoxin-like FAD/NAD(P)-binding domain 11
P-loop containing nucleoside triphosphate hydrolases Hypothetical protein YjiA, C-terminal domain 11
Metallo-dependent phosphatases 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheY-like 11
Nucleic acid-binding proteins Prokaryotic type KH domain (KH-domain type II) 11
PHP14-like Phospholipase D/nuclease 11
RuvA domain 2-like RuvA domain 2-like 11
NAD(P)-binding Rossmann-fold domains TrkA C-terminal domain-like 11
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 11
DNA clamp DNA clamp 11
Translation proteins Ribosomal protein S5 domain 2-like 11
Glutamyl tRNA-reductase catalytic, N-terminal domain Glutamyl tRNA-reductase dimerization domain 11
Hsp33 domain HSP33 redox switch-like 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
Nucleic acid-binding proteins PheT/TilS domain 11
FAD-binding/transporter-associated domain-like alpha-helical ferredoxin 11
Thioredoxin-like Nqo1C-terminal domain-like 11
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, catalytic domain 11
Glutamyl tRNA-reductase catalytic, N-terminal domain NAD(P)-binding Rossmann-fold domains 11
P-loop containing nucleoside triphosphate hydrolases C-terminal UvrC-binding domain of UvrB 11
Carbamate kinase-like ACT-like 11
Homeodomain-like Ribonuclease H-like 11
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 11
Zinc beta-ribbon DNA primase core 11
MurD-like peptide ligases, peptide-binding domain MurD-like peptide ligases, peptide-binding domain 11
Nucleotidylyl transferase tRNA-binding arm 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
YrdC/RibB RibA-like 11
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 11
5' to 3' exonuclease, C-terminal subdomain DNA/RNA polymerases 11
Prokaryotic type KH domain (KH-domain type II) Rad51 N-terminal domain-like 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 11
Periplasmic binding protein-like II ACT-like 11
S13-like H2TH domain Glucocorticoid receptor-like (DNA-binding domain) 11
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 11
post-HMGL domain-like 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 11
Methionine synthase domain Methionine synthase activation domain-like 11
PK beta-barrel domain-like PK C-terminal domain-like 11
NagB/RpiA/CoA transferase-like 4Fe-4S ferredoxins 11
PH0987 N-terminal domain-like Single hybrid motif 11
Adenine nucleotide alpha hydrolases-like DHS-like NAD/FAD-binding domain 11
FAD/NAD(P)-binding domain Nitrite and sulphite reductase 4Fe-4S domain-like 11
P-loop containing nucleoside triphosphate hydrolases Smc hinge domain 11
CO dehydrogenase ISP C-domain like FAD-binding/transporter-associated domain-like 11
PIN domain-like P-loop containing nucleoside triphosphate hydrolases 11
FAD-linked oxidases, C-terminal domain FAD-linked oxidases, C-terminal domain 11
Thiolase-like PLP-dependent transferases 11
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 11
Phoshotransferase/anion transport protein Phosphohistidine domain 11
JAB1/MPN domain Cysteine proteinases 11
Glutathione synthetase ATP-binding domain-like Succinyl-CoA synthetase domains 11
MOP-like MOP-like 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
PPK N-terminal domain-like Phospholipase D/nuclease 11
Ribonuclease H-like Nucleic acid-binding proteins 11
UROD/MetE-like UROD/MetE-like 11
Urease metallochaperone UreE, N-terminal domain Urease metallochaperone UreE, C-terminal domain 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleic acid-binding proteins 11
HprK N-terminal domain-like PEP carboxykinase-like 11
lambda integrase-like, N-terminal domain DNA breaking-rejoining enzymes 11

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