SUPERFAMILY 1.75 HMM library and genome assignments server

Domain combination pairs in Hyphopichia burtonii NRRL Y-1933 v1.0

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

  • For a list of unique full length architectures for this genome click here (can be slow).
Adjacent domain pairs graph

Graph of adjacent domain pairs.


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Domain combination pairs

936 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 6632
Actin-like ATPase domain Actin-like ATPase domain 2810
GroES-like NAD(P)-binding Rossmann-fold domains 242
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 178
RNA-binding domain, RBD RNA-binding domain, RBD 1611
HAD-like Calcium ATPase, transmembrane domain M 158
TPR-like TPR-like 1411
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 147
Metal cation-transporting ATPase, ATP-binding domain N HAD-like 147
Metal cation-transporting ATPase, ATP-binding domain N Calcium ATPase, transmembrane domain M 147
P-loop containing nucleoside triphosphate hydrolases Translation proteins 1310
ARM repeat ARM repeat 1311
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 134
Calcium ATPase, transduction domain A HAD-like 126
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 126
ABC transporter transmembrane region ABC transporter transmembrane region 125
Calcium ATPase, transduction domain A Metal cation-transporting ATPase, ATP-binding domain N 115
Ypt/Rab-GAP domain of gyp1p Ypt/Rab-GAP domain of gyp1p 105
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 103
GroEL equatorial domain-like GroEL-intermediate domain like 102
GroEL-intermediate domain like GroEL apical domain-like 91
GroEL equatorial domain-like GroEL apical domain-like 91
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 94
Homeodomain-like Homeodomain-like 96
ARM repeat Protein kinase-like (PK-like) 99
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 94
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 96
WD40 repeat-like WD40 repeat-like 97
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 83
Cyclin-like Cyclin-like 84
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 85
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 83
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 85
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 88
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 73
Thioesterase/thiol ester dehydrase-isomerase Thioesterase/thiol ester dehydrase-isomerase 75
Thioredoxin-like GST C-terminal domain-like 73
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 72
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 66
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein S5 domain 2-like 66
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 64
Chaperone J-domain HSP40/DnaJ peptide-binding domain 65
Class II aaRS and biotin synthetases Class II aaRS ABD-related 66
Translation proteins EF-G C-terminal domain-like 66
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 63
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 63
L domain-like L domain-like 66
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 62
CRAL/TRIO N-terminal domain CRAL/TRIO domain 65
EF-G C-terminal domain-like EF-G C-terminal domain-like 66
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 66
Thiolase-like Thiolase-like 52
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 55
beta-beta-alpha zinc fingers beta-beta-alpha zinc fingers 54
Zn-finger domain of Sec23/24 C-terminal, gelsolin-like domain of Sec23/24 52
beta-sandwich domain of Sec23/24 C-terminal, gelsolin-like domain of Sec23/24 52
beta-sandwich domain of Sec23/24 Zn-finger domain of Sec23/24 52
beta-sandwich domain of Sec23/24 vWA-like 52
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 52
Translation proteins SH3-like domain Nucleic acid-binding proteins 53
Thioredoxin-like Thioredoxin-like 54
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 52
BAR/IMD domain-like SH3-domain 54
Zn-finger domain of Sec23/24 Helical domain of Sec23/24 52
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 53
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 53
(Trans)glycosidases Glycosyl hydrolase domain 53
Helical domain of Sec23/24 C-terminal, gelsolin-like domain of Sec23/24 52
Zn-finger domain of Sec23/24 vWA-like 52
PreATP-grasp domain Rudiment single hybrid motif 55
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 52
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 54
vWA-like C-terminal, gelsolin-like domain of Sec23/24 52
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 54
PA domain Zn-dependent exopeptidases 54
WD40 repeat-like Quinoprotein alcohol dehydrogenase-like 53
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 54
SNARE-like Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor 53
Ribonuclease H-like DNA/RNA polymerases 53
beta-sandwich domain of Sec23/24 Helical domain of Sec23/24 52
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 52
vWA-like Helical domain of Sec23/24 52
EF-G C-terminal domain-like Ribosomal protein S5 domain 2-like 44
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 41
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 44
P-loop containing nucleoside triphosphate hydrolases TGS-like 41
SH3-domain SH3-domain 44
MFS general substrate transporter MFS general substrate transporter 43
Ubiquitin-like UBA-like 44
P-loop containing nucleoside triphosphate hydrolases RING/U-box 43
Glutathione synthetase ATP-binding domain-like Single hybrid motif 44
Rudiment single hybrid motif Single hybrid motif 44
F-box domain RNI-like 44
ARM repeat P-loop containing nucleoside triphosphate hydrolases 44
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 41
Nucleic acid-binding proteins Nucleic acid-binding proteins 44
Translation proteins Ribosomal protein S5 domain 2-like 44
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 44
Cullin homology domain "Winged helix" DNA-binding domain 43
Aconitase iron-sulfur domain LeuD/IlvD-like 41
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 42
Leukotriene A4 hydrolase N-terminal domain Metalloproteases ("zincins"), catalytic domain 42
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 43
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 32
ADC-like Cdc48 domain 2-like 33
PriA/YqbF domain GINS helical bundle-like 32
Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase C-terminal domain-like 32
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 33
Galactose mutarotase-like (Trans)glycosidases 32
alpha-ketoacid dehydrogenase kinase, N-terminal domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 33
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 32
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 33
Protease propeptides/inhibitors Subtilisin-like 32
Aldolase post-HMGL domain-like 32
RNase III domain-like dsRNA-binding domain-like 33
Enolase N-terminal domain-like Enolase C-terminal domain-like 31
Sec63 N-terminal domain-like E set domains 33
Galactose-binding domain-like (Trans)glycosidases 32
"Winged helix" DNA-binding domain Sec63 N-terminal domain-like 33
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 33
Bromodomain Bromodomain 33
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 33
NAD(P)-binding Rossmann-fold domains P-loop containing nucleoside triphosphate hydrolases 32
Arabinanase/levansucrase/invertase Concanavalin A-like lectins/glucanases 31
Aminoacid dehydrogenase-like, N-terminal domain P-loop containing nucleoside triphosphate hydrolases 32
C2 domain (Calcium/lipid-binding domain, CaLB) Protein kinase-like (PK-like) 33
Phospholipase D/nuclease Phospholipase D/nuclease 33
P-loop containing nucleoside triphosphate hydrolases Sec63 N-terminal domain-like 33
P-loop containing nucleoside triphosphate hydrolases Bromodomain 33
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 32
RING/U-box Cysteine proteinases 33
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 33
ACT-like ACT-like 33
DNA-binding domain of Mlu1-box binding protein MBP1 Ankyrin repeat 32
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 31
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 32
Eukaryotic type KH-domain (KH-domain type I) Eukaryotic type KH-domain (KH-domain type I) 33
Cupredoxins Cupredoxins 33
EF-hand EF-hand 33
SMAD/FHA domain Protein kinase-like (PK-like) 32
CBS-domain pair CBS-domain pair 33
CoA-dependent acyltransferases CoA-dependent acyltransferases 33
RING/U-box RING/U-box 33
C2 domain (Calcium/lipid-binding domain, CaLB) C2 domain (Calcium/lipid-binding domain, CaLB) 33
F-box domain WD40 repeat-like 32
PreATP-grasp domain Single hybrid motif 33
beta-Galactosidase/glucuronidase domain (Trans)glycosidases 32
Galactose-binding domain-like beta-Galactosidase/glucuronidase domain 32
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 33
P-loop containing nucleoside triphosphate hydrolases Smc hinge domain 32
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 33
Clavaminate synthase-like FYVE/PHD zinc finger 33
Metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 32
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheY-like 33
Aminopeptidase/glucanase lid domain Zn-dependent exopeptidases 31
FYVE/PHD zinc finger FYVE/PHD zinc finger 32
SH3-domain PX domain 33
Cullin repeat-like "Winged helix" DNA-binding domain 32
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 33
Cdc48 domain 2-like P-loop containing nucleoside triphosphate hydrolases 33
beta-Galactosidase/glucuronidase domain beta-Galactosidase/glucuronidase domain 32
Protein kinase-like (PK-like) KA1-like 33
BAR/IMD domain-like GTPase activation domain, GAP 33
Cullin repeat-like Cullin homology domain 32
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 32
cAMP-binding domain-like cAMP-binding domain-like 33
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 32
ADC-like P-loop containing nucleoside triphosphate hydrolases 33
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 33
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 33
ARM repeat WD40 repeat-like 33
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 33
ENTH/VHS domain GAT-like domain 33
P-loop containing nucleoside triphosphate hydrolases Phosphoglycerate mutase-like 32
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 31
Homodimeric domain of signal transducing histidine kinase CheY-like 33
ARM repeat Clathrin adaptor appendage domain 33
F1F0 ATP synthase subunit C F1F0 ATP synthase subunit C 21
P-loop containing nucleoside triphosphate hydrolases Hypothetical protein YjiA, C-terminal domain 22
Cyclophilin-like TPR-like 21
Cyclophilin-like Cyclophilin-like 22
ThrRS/AlaRS common domain Class II aaRS and biotin synthetases 22
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 22
PH domain-like PH domain-like 22
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 22
EF-hand Mitochondrial carrier 22
HMA, heavy metal-associated domain HAD-like 22
N-terminal, heterodimerisation domain of RBP7 (RpoE) Nucleic acid-binding proteins 21
DAK1/DegV-like DhaL-like 21
Initiation factor IF2/eIF5b, domain 3 Translation proteins 22
Smc hinge domain Tropomyosin 21
CCCH zinc finger CCCH zinc finger 22
Single hybrid motif Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 22
DBL homology domain (DH-domain) PH domain-like 22
P-loop containing nucleoside triphosphate hydrolases Tropomyosin 21
Zinc beta-ribbon Cyclin-like 22
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 22
Thioredoxin-like Ubiquitin-like 22
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 22
PreATP-grasp domain Methylglyoxal synthase-like 22
Acyl-CoA dehydrogenase C-terminal domain-like Acyl-CoA dehydrogenase C-terminal domain-like 21
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 21
vWA-like SPOC domain-like 21
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 22
Glutathione synthetase ATP-binding domain-like Cyclophilin-like 22
SH3-domain Ras GEF 22
RING/U-box RNA-binding domain, RBD 22
HMA, heavy metal-associated domain HMA, heavy metal-associated domain 22
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 22
Hypothetical protein SAV1430 Fe-S cluster assembly (FSCA) domain-like 22
DPP6 N-terminal domain-like alpha/beta-Hydrolases 21
Clathrin adaptor appendage domain Subdomain of clathrin and coatomer appendage domain 22
dsRNA-binding domain-like dsRNA-binding domain-like 22
Flavoproteins Ferredoxin reductase-like, C-terminal NADP-linked domain 22
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 21
P-loop containing nucleoside triphosphate hydrolases E set domains 22
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 21
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 21
Sec63 N-terminal domain-like Sec63 N-terminal domain-like 22
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Adenine nucleotide alpha hydrolases-like 22
Galactose mutarotase-like Glycosyl hydrolase domain 21
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 22
Cyclophilin-like Single hybrid motif 22
Nucleotidyltransferase PAP/OAS1 substrate-binding domain 22
Flavoproteins Riboflavin synthase domain-like 22
P-loop containing nucleoside triphosphate hydrolases HAND domain of the nucleosome remodeling ATPase ISWI 21
alpha/beta-Hydrolases (Phosphotyrosine protein) phosphatases II 22
Nucleotide-binding domain FAD-linked reductases, C-terminal domain 21
Amine oxidase N-terminal region Amine oxidase catalytic domain 22
tRNA-binding arm Class II aaRS and biotin synthetases 22
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 22
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 22
Translational machinery components L30e-like 22
ARM repeat Subdomain of clathrin and coatomer appendage domain 22
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 22
HMA, heavy metal-associated domain Metal cation-transporting ATPase, ATP-binding domain N 22
Zn-dependent exopeptidases Transferrin receptor-like dimerisation domain 22
Rudiment single hybrid motif Cyclophilin-like 22
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 21
BRCT domain BRCT domain 22
Transcription factor IIA (TFIIA), alpha-helical domain Transcription factor IIA (TFIIA), beta-barrel domain 22
Acyl-CoA N-acyltransferases (Nat) Acyl-CoA N-acyltransferases (Nat) 22
post-HMGL domain-like 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 21
Single hybrid motif CoA-dependent acyltransferases 22
"Winged helix" DNA-binding domain E set domains 22
t-snare proteins SNARE fusion complex 21
ARID-like FYVE/PHD zinc finger 22
Zn2/Cys6 DNA-binding domain Zn2/Cys6 DNA-binding domain 22
Class I glutamine amidotransferase-like Ribulose-phoshate binding barrel 22
(Trans)glycosidases Beta-D-glucan exohydrolase, C-terminal domain 22
PRTase-like PRTase-like 22
R1 subunit of ribonucleotide reductase, N-terminal domain PFL-like glycyl radical enzymes 21
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 22
SNARE-like SNARE fusion complex 21
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 22
Cytochrome b5-like heme/steroid binding domain FMN-linked oxidoreductases 22
Phosphofructokinase Phosphofructokinase 22
WW domain FKBP-like 21
POZ domain Skp1 dimerisation domain-like 21
SMAD/FHA domain "Winged helix" DNA-binding domain 22
Glucocorticoid receptor-like (DNA-binding domain) Glucocorticoid receptor-like (DNA-binding domain) 22
BAR/IMD domain-like PH domain-like 22
Restriction endonuclease-like RuvA domain 2-like 21
Tetrahydrobiopterin biosynthesis enzymes-like Tetrahydrobiopterin biosynthesis enzymes-like 22
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 21
ARID-like Clavaminate synthase-like 22
PH domain-like GTPase activation domain, GAP 22
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 22
Transducin (alpha subunit), insertion domain P-loop containing nucleoside triphosphate hydrolases 21
TPR-like "Winged helix" DNA-binding domain 21
Ankyrin repeat POZ domain 22
WW domain WW domain 22
PurM N-terminal domain-like PurM C-terminal domain-like 22
Voltage-gated potassium channels Voltage-gated potassium channels 22
Translation proteins ThrRS/AlaRS common domain 22
Nucleic acid-binding proteins Eukaryotic type KH-domain (KH-domain type I) 22
Metalloproteases ("zincins"), catalytic domain ARM repeat 22
E set domains AMPKBI-like 21
Translation initiation factor 2 beta, aIF2beta, N-terminal domain Zinc-binding domain of translation initiation factor 2 beta 22
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 22
ARM repeat Formin homology 2 domain (FH2 domain) 21
WD40 repeat-like Protein kinase-like (PK-like) 22
HAND domain of the nucleosome remodeling ATPase ISWI Homeodomain-like 21
RNA-binding domain, RBD CCCH zinc finger 22
Rhodanese/Cell cycle control phosphatase (Phosphotyrosine protein) phosphatases II 22
RING/U-box FYVE/PHD zinc finger 22
Clc chloride channel CBS-domain pair 21
Sec7 domain ARM repeat 22
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 22
PA domain Transferrin receptor-like dimerisation domain 22
Ribosomal protein L6 Ribosomal protein L6 22
Nucleotidylyl transferase Ribosomal protein L25-like 22
POZ domain POZ domain 22
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 22
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 22
PH domain-like Oxysterol-binding protein-like 22
Ankyrin repeat PLC-like phosphodiesterases 21
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 11
Protein kinase-like (PK-like) Protein kinase-like (PK-like) 11
Trypsin-like serine proteases Trypsin-like serine proteases 11
PH domain-like ARM repeat 11
TPR-like Protein kinase-like (PK-like) 11
RNA-binding domain, RBD DPP6 N-terminal domain-like 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
Ankyrin repeat RCC1/BLIP-II 11
PX domain SNARE fusion complex 11
GAT-like domain Clathrin adaptor appendage domain 11
Glutathione synthetase ATP-binding domain-like N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) 11
Thiamin diphosphate-binding fold (THDP-binding) Flavoproteins 11
Chaperone J-domain E set domains 11
FF domain FF domain 11
Acid proteases HMA, heavy metal-associated domain 11
Histone-fold Histone-fold 11
BRCT domain P-loop containing nucleoside triphosphate hydrolases 11
Methylglyoxal synthase-like Metallo-dependent hydrolases 11
Ankyrin repeat Oxysterol-binding protein-like 11
FAS1 domain FAS1 domain 11
HR1 repeat Protein kinase-like (PK-like) 11
Chaperone J-domain CSL zinc finger 11
Galactose mutarotase-like Six-hairpin glycosidases 11
C2 domain (Calcium/lipid-binding domain, CaLB) ARM repeat 11
Cyclophilin-like PH0987 N-terminal domain-like 11
Dom34/Pelota N-terminal domain-like L30e-like 11
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 11
TPR-like PIN domain-like 11
PX domain CAD & PB1 domains 11
RING/U-box R3H domain 11
TGS-like ThrRS/AlaRS common domain 11
HMG-box HMG-box 11
PH domain-like Protein kinase-like (PK-like) 11
Zn2/Cys6 DNA-binding domain Formin homology 2 domain (FH2 domain) 11
HMA, heavy metal-associated domain Cu,Zn superoxide dismutase-like 11
Ribosomal L27 protein-like ENTH/VHS domain 11
beta-sandwich domain of Sec23/24 ARM repeat 11
UBC-like Class II aaRS and biotin synthetases 11
Rudiment single hybrid motif Aldolase 11
Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 Zinc beta-ribbon 11
Homing endonucleases Homing endonucleases 11
(Phosphotyrosine protein) phosphatases II (Phosphotyrosine protein) phosphatases II 11
Class I glutamine amidotransferase-like ADC synthase 11
NSFL1 (p97 ATPase) cofactor p47, SEP domain Ubiquitin-like 11
ATP-dependent DNA ligase DNA-binding domain Nucleic acid-binding proteins 11
Dehydroquinate synthase-like NAD(P)-binding Rossmann-fold domains 11
P-loop containing nucleoside triphosphate hydrolases CheY-like 11
FabD/lysophospholipase-like Inosine monophosphate dehydrogenase (IMPDH) 11
Tricorn protease domain 2 WD40 repeat-like 11
BAR/IMD domain-like BAR/IMD domain-like 11
2Fe-2S ferredoxin-like 4Fe-4S ferredoxins 11
Rap30/74 interaction domains "Winged helix" DNA-binding domain 11
Nucleotide-diphospho-sugar transferases ARM repeat 11
SET domain Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 11
Amidase signature (AS) enzymes PreATP-grasp domain 11
Rudiment single hybrid motif N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) 11
PUA domain-like Ribosomal protein S5 domain 2-like 11
PEP carboxykinase N-terminal domain PEP carboxykinase-like 11
Flavoproteins Nitrite/Sulfite reductase N-terminal domain-like 11
BAR/IMD domain-like ArfGap/RecO-like zinc finger 11
Glutathione synthetase ATP-binding domain-like PH0987 N-terminal domain-like 11
Carbamoyl phosphate synthetase, large subunit connection domain Metallo-dependent hydrolases 11
DUSP-like Cysteine proteinases 11
PreATP-grasp domain post-HMGL domain-like 11
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 11
RNA-binding domain, RBD P-loop containing nucleoside triphosphate hydrolases 11
PH domain-like BSD domain-like 11
FabD/lysophospholipase-like Thioesterase/thiol ester dehydrase-isomerase 11
Glycolipid transfer protein, GLTP Nucleotide-diphospho-sugar transferases 11
Rudiment single hybrid motif PH0987 N-terminal domain-like 11
Cysteine-rich domain Protein kinase-like (PK-like) 11
UBA-like Chaperone J-domain 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
PreATP-grasp domain Metallo-dependent hydrolases 11
EF-hand Tropomyosin 11
L9 N-domain-like Ribonuclease H-like 11
Clathrin heavy-chain terminal domain ARM repeat 11
FAD/NAD(P)-binding domain 4Fe-4S ferredoxins 11
NAD(P)-binding Rossmann-fold domains 4'-phosphopantetheinyl transferase 11
UBC-like Ribosomal protein S5 domain 2-like 11
Metallo-hydrolase/oxidoreductase Metallo-hydrolase/oxidoreductase 11
Ubiquitin-like Zn-binding ribosomal proteins 11
N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 L30e-like 11
P-loop containing nucleoside triphosphate hydrolases Metallo-dependent phosphatases 11
L domain-like DNase I-like 11
Ribosomal L27 protein-like Nucleic acid-binding proteins 11
Zinc beta-ribbon Zinc beta-ribbon 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
DNA clamp DNA clamp 11
Chaperone J-domain beta-beta-alpha zinc fingers 11
GroEL apical domain-like SAICAR synthase-like 11
FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) Protein kinase-like (PK-like) 11
PH domain-like CAD & PB1 domains 11
Homeodomain-like GINS helical bundle-like 11
Dehydroquinate synthase-like Aldolase 11
PH domain-like WD40 repeat-like 11
Dom34/Pelota N-terminal domain-like Translational machinery components 11
P-loop containing nucleoside triphosphate hydrolases Microbial and mitochondrial ADK, insert "zinc finger" domain 11
GST C-terminal domain-like Ribosomal protein L25-like 11
Trimeric LpxA-like enzymes ARM repeat 11
PLP-dependent transferases P-loop containing nucleoside triphosphate hydrolases 11
TPR-like RING/U-box 11
Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 Elongation factor TFIIS domain 2 11
EF-hand Calponin-homology domain, CH-domain 11
PreATP-grasp domain ClpP/crotonase 11
Metallo-dependent phosphatases 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain 11
Nqo1 middle domain-like Nqo1C-terminal domain-like 11
2Fe-2S ferredoxin-like alpha-helical ferredoxin 11
PH domain-like Ypt/Rab-GAP domain of gyp1p 11
alpha-helical ferredoxin Nucleotide-binding domain 11
Globin-like Riboflavin synthase domain-like 11
VPS9 domain UBA-like 11
WD40 repeat-like Cyclophilin-like 11
6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 11
UBA-like Thioredoxin-like 11
ACP-like NAD(P)-binding Rossmann-fold domains 11
Carbamoyl phosphate synthetase, large subunit connection domain Aspartate/ornithine carbamoyltransferase 11
PreATP-grasp domain Aldolase 11
PYP-like sensor domain (PAS domain) CheY-like 11
Tex N-terminal region-like SH2 domain 11
E set domains Glycosyl hydrolase domain 11
C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase Quinoprotein alcohol dehydrogenase-like 11
WD40 repeat-like Calcium-dependent phosphotriesterase 11
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 11
UBC-like P-loop containing nucleoside triphosphate hydrolases 11
Nucleotide-diphospho-sugar transferases Calcium ATPase, transmembrane domain M 11
Activator of Hsp90 ATPase, Aha1 Bet v1-like 11
Creatinase/aminopeptidase "Winged helix" DNA-binding domain 11
P-loop containing nucleoside triphosphate hydrolases ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
RuvA domain 2-like SH2 domain 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
Histone-fold ARM repeat 11
Amidase signature (AS) enzymes Cyclophilin-like 11
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 11
L domain-like NTF2-like 11
C2 domain (Calcium/lipid-binding domain, CaLB) Translation proteins SH3-like domain 11
TGS-like Class II aaRS ABD-related 11
PurM N-terminal domain-like Class I glutamine amidotransferase-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
GroES-like GroES-like 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 11
Ribosomal proteins L15p and L18e "Winged helix" DNA-binding domain 11
Methyl-accepting chemotaxis protein (MCP) signaling domain CheY-like 11
Tex N-terminal region-like Ribonuclease H-like 11
Trypsin-like serine proteases PDZ domain-like 11
Ribonuclease H-like Ran binding protein zinc finger-like 11
UDP-Glycosyltransferase/glycogen phosphorylase UDP-Glycosyltransferase/glycogen phosphorylase 11
NAD(P)-binding Rossmann-fold domains ACT-like 11
WD40 repeat-like C2 domain (Calcium/lipid-binding domain, CaLB) 11
Cysteine proteinases Ribonuclease H-like 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
Nucleic acid-binding proteins TPR-like 11
PH0987 N-terminal domain-like Single hybrid motif 11
Carbamate kinase-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 11
(Trans)glycosidases Anthrax protective antigen 11
YjgF-like YjgF-like 11
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 11
cAMP-binding domain-like RNI-like 11
Subtilisin-like Galactose-binding domain-like 11
Flavoproteins Radical SAM enzymes 11
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 11
FYSH domain Hypothetical protein AF0491, middle domain 11
PUA domain-like PUA domain-like 11
Rhodanese/Cell cycle control phosphatase Cysteine proteinases 11
NAD(P)-binding Rossmann-fold domains Thiolase-like 11
2Fe-2S ferredoxin-like Formate dehydrogenase/DMSO reductase, domains 1-3 11
Aldolase Aminoacid dehydrogenase-like, N-terminal domain 11
NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains 11
Nitrite/Sulfite reductase N-terminal domain-like Nitrite/Sulfite reductase N-terminal domain-like 11
Nucleic acid-binding proteins Metallo-dependent phosphatases 11
Glycerol-3-phosphate (1)-acyltransferase Glycerol-3-phosphate (1)-acyltransferase 11
C2 domain (Calcium/lipid-binding domain, CaLB) WW domain 11
Putative isomerase YbhE WD40 repeat-like 11
YbaK/ProRS associated domain C-terminal domain of ProRS 11
SH3-domain CAD & PB1 domains 11
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Cytochrome b5-like heme/steroid binding domain 11
BEACH domain WD40 repeat-like 11
mRNA decapping enzyme DcpS N-terminal domain HIT-like 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
Zinc-binding domain of translation initiation factor 2 beta ARM repeat 11
UBC-like UBA-like 11
PreATP-grasp domain Cyclophilin-like 11
RCC1/BLIP-II POZ domain 11
PYP-like sensor domain (PAS domain) Protein kinase-like (PK-like) 11
PLP-dependent transferases EF-G C-terminal domain-like 11
Actin depolymerizing proteins SH3-domain 11
Nucleotide-binding domain Nucleotide-binding domain 11
Ribosomal protein S5 domain 2-like HSP90 C-terminal domain 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
WW domain Hect, E3 ligase catalytic domain 11
Endosomal sorting complex assembly domain VPS28 C-terminal domain-like 11
6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK Dihydropteroate synthetase-like 11
WD40 repeat-like Cysteine proteinases 11
ENTH/VHS domain RNA-binding domain, RBD 11
DNA polymerase beta, N-terminal domain-like Restriction endonuclease-like 11
Protease propeptides/inhibitors Galactose mutarotase-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Nucleotide-binding domain 11
HAD-like BRCT domain 11
Rhodanese/Cell cycle control phosphatase Rhodanese/Cell cycle control phosphatase 11
EPT/RTPC-like Aminoacid dehydrogenase-like, N-terminal domain 11
FabD/lysophospholipase-like 4'-phosphopantetheinyl transferase 11
ARM repeat Hypothetical protein YjiA, C-terminal domain 11
BAH domain P-loop containing nucleoside triphosphate hydrolases 11
Pseudouridine synthase PUA domain-like 11
ArfGap/RecO-like zinc finger UBA-like 11
Class I glutamine amidotransferase-like Class II aaRS and biotin synthetases 11
Periplasmic binding protein-like II GlnB-like 11
Terpenoid cyclases/Protein prenyltransferases Terpenoid cyclases/Protein prenyltransferases 11
Alpha subunit of glutamate synthase, C-terminal domain alpha-helical ferredoxin 11
SpoIIaa-like cAMP-binding domain-like 11
Ras GEF Ras GEF 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 11
UROD/MetE-like UROD/MetE-like 11
UBA-like TPR-like 11
RNA-binding domain, RBD Ran binding protein zinc finger-like 11
Periplasmic binding protein-like II ACT-like 11
NagB/RpiA/CoA transferase-like NagB/RpiA/CoA transferase-like 11
Tryptophan synthase beta subunit-like PLP-dependent enzymes ACT-like 11
HAMP domain-like Homodimeric domain of signal transducing histidine kinase 11
Class II aaRS ABD-related C-terminal domain of ProRS 11
EPT/RTPC-like P-loop containing nucleoside triphosphate hydrolases 11
Calponin-homology domain, CH-domain EB1 dimerisation domain-like 11
SH3-domain SAM/Pointed domain 11
WD40 repeat-like DPP6 N-terminal domain-like 11
Concanavalin A-like lectins/glucanases PH domain-like 11
Methylglyoxal synthase-like Cytidine deaminase-like 11
cAMP-binding domain-like F-box domain 11
Staphylococcal nuclease Tudor/PWWP/MBT 11
Cysteine proteinases UBA-like 11
HIT-like HIT-like 11
Nucleic acid-binding proteins eIF-2-alpha, C-terminal domain 11
Adenine nucleotide alpha hydrolases-like DHS-like NAD/FAD-binding domain 11
TPR-like F-box domain 11
EF-hand UBA-like 11
Translation proteins Translation proteins 11
Metallo-dependent hydrolases Aspartate/ornithine carbamoyltransferase 11
Carbamate kinase-like ACT-like 11
Hedgehog/intein (Hint) domain C-terminal domain of alpha and beta subunits of F1 ATP synthase 11
FAD/NAD(P)-binding domain Cytochrome b5-like heme/steroid binding domain 11
BRCT domain Lesion bypass DNA polymerase (Y-family), little finger domain 11
Nqo1 FMN-binding domain-like Nqo1C-terminal domain-like 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
Acid proteases RING/U-box 11
P-loop containing nucleoside triphosphate hydrolases PRTase-like 11
PreATP-grasp domain PurM N-terminal domain-like 11
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 11
Amidase signature (AS) enzymes Rudiment single hybrid motif 11
TPR-like RNA-binding domain, RBD 11
PH domain-like EF-hand 11
HAD-like HAD-like 11
GINS helical bundle-like MurD-like peptide ligases, peptide-binding domain 11
Chromo domain-like Chromo domain-like 11
GST C-terminal domain-like Nucleotidylyl transferase 11
GAF domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
SMI1/KNR4-like SMI1/KNR4-like 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
Glutathione synthetase ATP-binding domain-like Aldolase 11
Glutathione synthetase ATP-binding domain-like Metallo-dependent hydrolases 11
ClpP/crotonase ClpP/crotonase 11
Putative DNA-binding domain Putative DNA-binding domain 11
Acetyl-CoA synthetase-like ACP-like 11
Cytochrome c Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor 11
PLP-dependent transferases Translation proteins 11
Galactose-binding domain-like Galactose mutarotase-like 11
GTPase activation domain, GAP RGC domain-like 11
Ribonuclease H-like HRDC-like 11
Homeodomain-like MurD-like peptide ligases, catalytic domain 11
HAMP domain-like CheY-like 11
Galactose-binding domain-like S-adenosyl-L-methionine-dependent methyltransferases 11
Terpenoid synthases Terpenoid synthases 11
CoA-dependent acyltransferases NAD(P)-binding Rossmann-fold domains 11
BRCT domain post-AAA+ oligomerization domain-like 11
Glutathione synthetase ATP-binding domain-like ClpP/crotonase 11
Calpain large subunit, middle domain (domain III) Calpain large subunit, middle domain (domain III) 11
E set domains Ankyrin repeat 11
Ran binding protein zinc finger-like "Winged helix" DNA-binding domain 11
MFS general substrate transporter Clavaminate synthase-like 11
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 11
Chromo domain-like P-loop containing nucleoside triphosphate hydrolases 11
HR1 repeat Cysteine-rich domain 11
(Trans)glycosidases Six-hairpin glycosidases 11
Ras GEF PH domain-like 11
L domain-like UBA-like 11
FYVE/PHD zinc finger GroEL apical domain-like 11
Thioredoxin-like Galactose-binding domain-like 11
Supernatant protein factor (SPF), C-terminal domain Oxysterol-binding protein-like 11
FMN-linked oxidoreductases alpha-helical ferredoxin 11
PH domain-like ArfGap/RecO-like zinc finger 11
Radical SAM enzymes Acyl-CoA N-acyltransferases (Nat) 11
Globin-like Ferredoxin reductase-like, C-terminal NADP-linked domain 11
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex CoA-dependent acyltransferases 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
ARM repeat FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) 11
CBS-domain pair CAD & PB1 domains 11
Ribonuclease H-like Ribonuclease H-like 11
UBA-like UBA-like 11
RING/U-box TRAF domain-like 11
Nucleic acid-binding proteins "Winged helix" DNA-binding domain 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
HAMP domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Riboflavin synthase domain-like Riboflavin synthase domain-like 11
P-loop containing nucleoside triphosphate hydrolases SH3-domain 11
FAD-linked reductases, C-terminal domain 4Fe-4S ferredoxins 11
P-loop containing nucleoside triphosphate hydrolases Aldolase 11
C2 domain (Calcium/lipid-binding domain, CaLB) GTPase activation domain, GAP 11
Nucleotidyltransferase Poly A polymerase C-terminal region-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Alpha subunit of glutamate synthase, C-terminal domain 11
CHY zinc finger-like Zinc hairpin stack 11
UBA-like XPC-binding domain 11
Beta-D-glucan exohydrolase, C-terminal domain Anthrax protective antigen 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
Ran binding protein zinc finger-like Ran binding protein zinc finger-like 11
Tudor/PWWP/MBT Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 11
Single hybrid motif ClpP/crotonase 11
ARM repeat Homo-oligomeric flavin-containing Cys decarboxylases, HFCD 11
HisI-like ALDH-like 11
SET domain SET domain 11
Concanavalin A-like lectins/glucanases BEACH domain 11
Adenine nucleotide alpha hydrolases-like YjgF-like 11
SAM/Pointed domain PH domain-like 11
all-alpha NTP pyrophosphatases ALDH-like 11
Cap-Gly domain RNI-like 11
Ribonuclease H-like RuvA domain 2-like 11
P-loop containing nucleoside triphosphate hydrolases Hedgehog/intein (Hint) domain 11
Carbon-nitrogen hydrolase Adenine nucleotide alpha hydrolases-like 11
PUA domain-like Nucleotidylyl transferase 11
RING/U-box UBA-like 11
BRCT domain DNA/RNA polymerases 11
Calponin-homology domain, CH-domain RGC domain-like 11
NTF2-like RNA-binding domain, RBD 11
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 11
FabD/lysophospholipase-like FabD/lysophospholipase-like 11
Rudiment single hybrid motif PurM N-terminal domain-like 11
DEK C-terminal domain SWIB/MDM2 domain 11
PDZ domain-like PDZ domain-like 11
Cell cycle regulatory proteins ARM repeat 11
Inhibitor of apoptosis (IAP) repeat Inhibitor of apoptosis (IAP) repeat 11
TRAF domain-like Cysteine proteinases 11
Thioredoxin-like eEF1-gamma domain 11
Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment DNA breaking-rejoining enzymes 11
Ribonuclease H-like SH2 domain 11
TATA-box binding protein-like DNA-glycosylase 11
Glutathione synthetase ATP-binding domain-like PurM C-terminal domain-like 11
Glutathione synthetase ATP-binding domain-like Aspartate/ornithine carbamoyltransferase 11
P-loop containing nucleoside triphosphate hydrolases Homing endonucleases 11
Ribosomal L27 protein-like Eukaryotic type KH-domain (KH-domain type I) 11
Glucocorticoid receptor-like (DNA-binding domain) GTPase activation domain, GAP 11
PreATP-grasp domain PH0987 N-terminal domain-like 11
Hedgehog/intein (Hint) domain Homing endonucleases 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) alpha-helical ferredoxin 11
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 11
Nucleotidylyl transferase Nucleotidylyl transferase 11
GST C-terminal domain-like eEF1-gamma domain 11
Kelch motif POZ domain 11
Acetyl-CoA synthetase-like NAD(P)-binding Rossmann-fold domains 11
Glutamine synthetase/guanido kinase GatB/YqeY motif 11
Rudiment single hybrid motif PurM C-terminal domain-like 11
NAD(P)-binding Rossmann-fold domains Galactose mutarotase-like 11
Dehydroquinate synthase-like EPT/RTPC-like 11
PLP-binding barrel Alanine racemase C-terminal domain-like 11
"Winged helix" DNA-binding domain Protein kinase-like (PK-like) 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
beta-Galactosidase/glucuronidase domain Galactose mutarotase-like 11
SMAD/FHA domain RING/U-box 11
TPR-like Chaperone J-domain 11
beta-N-acetylhexosaminidase-like domain (Trans)glycosidases 11
Cyclophilin-like RNA-binding domain, RBD 11
UBC-like RING/U-box 11
cAMP-binding domain-like FabD/lysophospholipase-like 11
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 11
Activating enzymes of the ubiquitin-like proteins Activating enzymes of the ubiquitin-like proteins 11
Protease propeptides/inhibitors Families 57/38 glycoside transferase middle domain 11
EPT/RTPC-like NAD(P)-binding Rossmann-fold domains 11
NAD-binding domain of HMG-CoA reductase Substrate-binding domain of HMG-CoA reductase 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase HSP90 C-terminal domain 11
N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 Translational machinery components 11
Polo-box domain Polo-box domain 11
P-loop containing nucleoside triphosphate hydrolases Homodimeric domain of signal transducing histidine kinase 11
"Winged helix" DNA-binding domain CheY-like 11
ISP transmembrane anchor ISP domain 11
Nucleotidyltransferase PAP/Archaeal CCA-adding enzyme, C-terminal domain 11
Eukaryotic RPB5 N-terminal domain RPB5-like RNA polymerase subunit 11
PH domain-like (Phosphotyrosine protein) phosphatases II 11
SWIB/MDM2 domain eIF1-like 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleotidylyl transferase 11
Homing endonucleases C-terminal domain of alpha and beta subunits of F1 ATP synthase 11
CoA-dependent acyltransferases ACP-like 11
eIF2alpha middle domain-like eIF-2-alpha, C-terminal domain 11
"Winged helix" DNA-binding domain GTPase activation domain, GAP 11
HR1 repeat C2 domain (Calcium/lipid-binding domain, CaLB) 11
Leukotriene A4 hydrolase N-terminal domain ARM repeat 11
Eukaryotic initiation factor 4f subunit eIF4g, eIF4e-binding domain ARM repeat 11
Arp2/3 complex subunits Arp2/3 complex subunits 11
FMN-binding split barrel UbiD C-terminal domain-like 11
CHY zinc finger-like RING/U-box 11
Supernatant protein factor (SPF), C-terminal domain PH domain-like 11
RING/U-box Homeodomain-like 11
PLP-dependent transferases PLP-dependent transferases 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
RibA-like RibA-like 11
C2 domain (Calcium/lipid-binding domain, CaLB) Hect, E3 ligase catalytic domain 11
Tetrahydrobiopterin biosynthesis enzymes-like Dihydropteroate synthetase-like 11
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 11
PreATP-grasp domain PurM C-terminal domain-like 11
WD40 repeat-like Cysteine-rich domain 11
Ribosomal L27 protein-like I/LWEQ domain 11
Amine oxidase N-terminal region Amine oxidase N-terminal region 11
Carbamate kinase-like PUA domain-like 11
4'-phosphopantetheinyl transferase 4'-phosphopantetheinyl transferase 11
Ubiquitin-like Cap-Gly domain 11
Actin depolymerizing proteins Actin depolymerizing proteins 11
Leucine zipper domain YAP1 redox domain 11
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 11
Tryptophan synthase beta subunit-like PLP-dependent enzymes CBS-domain pair 11
SAM/Pointed domain Protein kinase-like (PK-like) 11
TPR-like HSP20-like chaperones 11
Families 57/38 glycoside transferase middle domain Galactose mutarotase-like 11
UDP-Glycosyltransferase/glycogen phosphorylase HAD-like 11
Thioredoxin-like ERP29 C domain-like 11
EF-hand C2 domain (Calcium/lipid-binding domain, CaLB) 11
FabD/lysophospholipase-like Thiolase-like 11
(Trans)glycosidases Chitinase insertion domain 11
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 11
Thiamin pyrophosphokinase, catalytic domain Thiamin pyrophosphokinase, substrate-binding domain 11
MIT domain P-loop containing nucleoside triphosphate hydrolases 11
PUA domain-like SWIB/MDM2 domain 11
Pre-PUA domain PUA domain-like 11
HisI-like all-alpha NTP pyrophosphatases 11
VPS9 domain Ankyrin repeat 11
EF-hand Adhesin YadA, collagen-binding domain 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
ISP domain Bet v1-like 11
ENTH/VHS domain FYVE/PHD zinc finger 11
dsRNA-binding domain-like Activating enzymes of the ubiquitin-like proteins 11
Translation initiation factor 2 beta, aIF2beta, N-terminal domain ARM repeat 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
GAF domain-like CheY-like 11
PLC-like phosphodiesterases C2 domain (Calcium/lipid-binding domain, CaLB) 11
"Winged helix" DNA-binding domain RNA-binding domain, RBD 11
Ubiquitin-like Cysteine proteinases 11
GINS helical bundle-like MurD-like peptide ligases, catalytic domain 11
Putative DNA-binding domain PheT/TilS domain 11
Thiamin phosphate synthase Ribokinase-like 11
Chaperone J-domain HSC20 (HSCB), C-terminal oligomerisation domain 11
Ribulose-phoshate binding barrel Tryptophan synthase beta subunit-like PLP-dependent enzymes 11
Nucleotidylyl transferase P-loop containing nucleoside triphosphate hydrolases 11
TPR-like RNI-like 11
Cryptochrome/photolyase, N-terminal domain Cryptochrome/photolyase FAD-binding domain 11
Dehydroquinate synthase-like Aminoacid dehydrogenase-like, N-terminal domain 11
"Winged helix" DNA-binding domain Regulator of G-protein signaling, RGS 11
Glutathione synthetase ATP-binding domain-like PurM N-terminal domain-like 11
PH domain-like "Winged helix" DNA-binding domain 11
NAD(P)-binding Rossmann-fold domains Thioesterase/thiol ester dehydrase-isomerase 11
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 11
Thiolase-like 4'-phosphopantetheinyl transferase 11
Domain of the SRP/SRP receptor G-proteins Signal peptide-binding domain 11
Methyl-accepting chemotaxis protein (MCP) signaling domain Homodimeric domain of signal transducing histidine kinase 11
Protease propeptides/inhibitors Glycoside hydrolase/deacetylase 11
Homeodomain-like MurD-like peptide ligases, peptide-binding domain 11
BSD domain-like BSD domain-like 11
FYVE/PHD zinc finger SAICAR synthase-like 11
BAR/IMD domain-like "Winged helix" DNA-binding domain 11
CCCH zinc finger RING/U-box 11
YbaK/ProRS associated domain Class II aaRS ABD-related 11
PurM C-terminal domain-like Class I glutamine amidotransferase-like 11
WD40 repeat-like Ribonuclease H-like 11
GST C-terminal domain-like eEF-1beta-like 11
Glycoside hydrolase/deacetylase Families 57/38 glycoside transferase middle domain 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
PreATP-grasp domain PreATP-grasp domain 11
Ubiquitin-like AN1-like Zinc finger 11
DBL homology domain (DH-domain) CAD & PB1 domains 11
UBA-like NSFL1 (p97 ATPase) cofactor p47, SEP domain 11
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
E set domains (Trans)glycosidases 11
Chaperone J-domain RNA-binding domain, RBD 11
Pyruvate-ferredoxin oxidoreductase, PFOR, domain III Ferredoxin reductase-like, C-terminal NADP-linked domain 11
PH domain-like BEACH domain 11
beta-sandwich domain of Sec23/24 Protein kinase-like (PK-like) 11
Nqo1 FMN-binding domain-like Nqo1 middle domain-like 11
Ribokinase-like alpha/beta-Hydrolases 11
EPT/RTPC-like Aldolase 11
P-loop containing nucleoside triphosphate hydrolases HRDC-like 11
Methyl-accepting chemotaxis protein (MCP) signaling domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
SurE-like Glutathione synthetase ATP-binding domain-like 11
WW domain FF domain 11
Formate/glycerate dehydrogenase catalytic domain-like ACT-like 11
Adenine nucleotide alpha hydrolases-like Cytochrome P450 11
UBC-like Protein kinase-like (PK-like) 11
Amidase signature (AS) enzymes Glutathione synthetase ATP-binding domain-like 11
TGS-like Class II aaRS and biotin synthetases 11
PreATP-grasp domain N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) 11
Glycoside hydrolase/deacetylase Galactose mutarotase-like 11
Thiamin diphosphate-binding fold (THDP-binding) Nitrite and sulphite reductase 4Fe-4S domain-like 11
PK beta-barrel domain-like PK C-terminal domain-like 11
Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain WD40 repeat-like 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases EF-hand 11
SMAD/FHA domain SMAD/FHA domain 11
PheT/TilS domain Class II aaRS and biotin synthetases 11
Acyl-CoA N-acyltransferases (Nat) Bromodomain 11
Methylglyoxal synthase-like Aspartate/ornithine carbamoyltransferase 11
N-terminal domain of alpha and beta subunits of F1 ATP synthase Homing endonucleases 11
PP2C-like Nucleotide cyclase 11
GAF domain-like Homodimeric domain of signal transducing histidine kinase 11
SH3-domain PH domain-like 11
Cadherin-like Cadherin-like 11
Tetrahydrobiopterin biosynthesis enzymes-like 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK 11
Metallo-dependent phosphatases Zn-binding ribosomal proteins 11
WD40 repeat-like Zn-dependent exopeptidases 11
P-loop containing nucleoside triphosphate hydrolases vWA-like 11
ENTH/VHS domain Clathrin adaptor appendage domain 11
FYVE/PHD zinc finger Rabenosyn-5 Rab-binding domain-like 11
Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 WW domain 11
ENTH/VHS domain SH3-domain 11
P-loop containing nucleoside triphosphate hydrolases GAF domain-like 11
Protein kinase-like (PK-like) Translation proteins SH3-like domain 11
PH domain-like Ran binding protein zinc finger-like 11
Glutathione synthetase ATP-binding domain-like Succinyl-CoA synthetase domains 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
4Fe-4S ferredoxins Formate dehydrogenase/DMSO reductase, domains 1-3 11
Pentapeptide repeat-like beta-beta-alpha zinc fingers 11
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 11
Regulator of G-protein signaling, RGS PX domain 11
Aldolase Single hybrid motif 11
Surp module (SWAP domain) Surp module (SWAP domain) 11
Methyl-accepting chemotaxis protein (MCP) signaling domain HAMP domain-like 11
Nucleic acid-binding proteins eIF2alpha middle domain-like 11
Galactose-binding domain-like Galactose-binding domain-like 11
Amidase signature (AS) enzymes Single hybrid motif 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) Homeodomain-like 11
"Winged helix" DNA-binding domain HRDC-like 11
PAP/OAS1 substrate-binding domain PAP/Archaeal CCA-adding enzyme, C-terminal domain 11
FMN-linked oxidoreductases Alpha subunit of glutamate synthase, C-terminal domain 11
L domain-like PP2C-like 11
Oligoxyloglucan reducing end-specific cellobiohydrolase Oligoxyloglucan reducing end-specific cellobiohydrolase 11
RuvA domain 2-like RuvA domain 2-like 11
PreATP-grasp domain Aspartate/ornithine carbamoyltransferase 11
L domain-like RNI-like 11
Cysteine-rich domain Cysteine-rich domain 11
TK C-terminal domain-like Riboflavin synthase domain-like 11
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 11
FMN-linked oxidoreductases Nucleotide-binding domain 11
Hypothetical protein c14orf129, hspc210 TPR-like 11
Acetyl-CoA synthetase-like Acetyl-CoA synthetase-like 11
PIN domain-like Nucleic acid-binding proteins 11
Taf5 N-terminal domain-like WD40 repeat-like 11
Alpha subunit of glutamate synthase, C-terminal domain Nucleotide-binding domain 11
Eukaryotic type KH-domain (KH-domain type I) Retrovirus zinc finger-like domains 11
ARM repeat Hect, E3 ligase catalytic domain 11
UBC-like Endosomal sorting complex assembly domain 11
FAD/NAD(P)-binding domain NAD(P)-binding Rossmann-fold domains 11
Dehydroquinate synthase-like P-loop containing nucleoside triphosphate hydrolases 11
Homing endonucleases Cytochrome c oxidase subunit I-like 11
Nitrite and sulphite reductase 4Fe-4S domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
HCP-like HCP-like 11
NAD(P)-binding Rossmann-fold domains Siroheme synthase middle domains-like 11
Protease propeptides/inhibitors Zn-dependent exopeptidases 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
Zinc hairpin stack RING/U-box 11
E set domains E set domains 11
YbaK/ProRS associated domain Class II aaRS and biotin synthetases 11
Inosine monophosphate dehydrogenase (IMPDH) Thioesterase/thiol ester dehydrase-isomerase 11
Cysteine proteinases Calpain large subunit, middle domain (domain III) 11
Class II aaRS and biotin synthetases C-terminal domain of ProRS 11
Protein kinase-like (PK-like) Class II aaRS and biotin synthetases 11
Indigoidine synthase A-like Ribokinase-like 11
Glutathione synthetase ATP-binding domain-like Phosphoglycerate mutase-like 11
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 11
C2 domain (Calcium/lipid-binding domain, CaLB) Cysteine-rich domain 11
Elongation factor TFIIS domain 2 Zinc beta-ribbon 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FMN-linked oxidoreductases 11
Concanavalin A-like lectins/glucanases WD40 repeat-like 11
Carbamate kinase-like NAD(P)-binding Rossmann-fold domains 11
Ubiquitin-like XPC-binding domain 11
Staphylococcal nuclease Staphylococcal nuclease 11
ATP-dependent DNA ligase DNA-binding domain DNA ligase/mRNA capping enzyme, catalytic domain 11
Amidase signature (AS) enzymes PH0987 N-terminal domain-like 11
Aldolase NAD(P)-binding Rossmann-fold domains 11
Ras GEF GTPase activation domain, GAP 11
Pseudouridine synthase Cytidine deaminase-like 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 11
SET domain WW domain 11
TPR-like HCP-like 11
PH domain-like UDP-Glycosyltransferase/glycogen phosphorylase 11
Flavoproteins Nitrite and sulphite reductase 4Fe-4S domain-like 11
Tropomyosin UBA-like 11
ENTH/VHS domain I/LWEQ domain 11
Concanavalin A-like lectins/glucanases P-domain of calnexin/calreticulin 11
Ribokinase-like Heme oxygenase-like 11
EF-hand PLC-like phosphodiesterases 11
Ankyrin repeat PH domain-like 11
Cell cycle regulatory proteins Protein kinase-like (PK-like) 11
Nucleic acid-binding proteins BRCT domain 11
Folate-binding domain Aminomethyltransferase beta-barrel domain 11
Protein kinase-like (PK-like) CheY-like 11
N-terminal domain of alpha and beta subunits of F1 ATP synthase Hedgehog/intein (Hint) domain 11
Ribonuclease H-like RNA-binding domain, RBD 11
PUA domain-like eIF1-like 11
FabD/lysophospholipase-like NAD(P)-binding Rossmann-fold domains 11
WD40 repeat-like HR1 repeat 11
Pyruvate-ferredoxin oxidoreductase, PFOR, domain III Riboflavin synthase domain-like 11
PAH2 domain PAH2 domain 11
Calponin-homology domain, CH-domain GTPase activation domain, GAP 11
TK C-terminal domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 11
Thiamin diphosphate-binding fold (THDP-binding) Nitrite/Sulfite reductase N-terminal domain-like 11
Rudiment single hybrid motif post-HMGL domain-like 11
vWA-like Cysteine-rich domain 11
Ypt/Rab-GAP domain of gyp1p EF-hand 11
CoA-dependent acyltransferases Acetyl-CoA synthetase-like 11
L domain-like Nucleotide cyclase 11
Chaperone J-domain Sec63 N-terminal domain-like 11
Protein kinase-like (PK-like) Polo-box domain 11
TATA-box binding protein-like TATA-box binding protein-like 11
F-box domain Clavaminate synthase-like 11
NTF2-like UBA-like 11
L30e-like alpha/beta knot 11
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 11
Rhomboid-like Ubiquitin-like 11
RNA-binding domain, RBD PABC (PABP) domain 11
S-adenosyl-L-methionine-dependent methyltransferases Kelch motif 11
WD40 repeat-like Bacterial exopeptidase dimerisation domain 11
HIT/MYND zinc finger-like SET domain 11
SNARE fusion complex SNARE fusion complex 11
post-HMGL domain-like Single hybrid motif 11
Tex N-terminal region-like RuvA domain 2-like 11
RING/U-box WD40 repeat-like 11
TK C-terminal domain-like Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 11
Glutathione synthetase ATP-binding domain-like post-HMGL domain-like 11
Rudiment single hybrid motif ClpP/crotonase 11
FYVE/PHD zinc finger SET domain 11
Quinoprotein alcohol dehydrogenase-like Protein kinase-like (PK-like) 11
N-terminal domain of adenylylcyclase associated protein, CAP C-terminal domain of adenylylcyclase associated protein 11
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 11
Class II aaRS and biotin synthetases Translation proteins 11
NagB/RpiA/CoA transferase-like D-ribose-5-phosphate isomerase (RpiA), lid domain 11

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