SUPERFAMILY 1.75 HMM library and genome assignments server

Domain combination pairs in Hyphomicrobium sp. MC1

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

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Adjacent domain pairs graph

Graph of adjacent domain pairs.


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Domain combination pairs

644 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 4115
"Winged helix" DNA-binding domain Periplasmic binding protein-like II 312
CheY-like C-terminal effector domain of the bipartite response regulators 265
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 2314
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 218
Homeodomain-like Tetracyclin repressor-like, C-terminal domain 202
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB transmembrane domain 197
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 197
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 197
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB transmembrane domain 197
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 186
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheY-like 1310
GroES-like NAD(P)-binding Rossmann-fold domains 122
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 125
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 123
Homodimeric domain of signal transducing histidine kinase CheY-like 118
Nucleotide cyclase EAL domain-like 106
Thioredoxin-like GST C-terminal domain-like 101
Cytochrome c Cytochrome c 105
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 102
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 97
Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase C-terminal domain-like 94
PYP-like sensor domain (PAS domain) PYP-like sensor domain (PAS domain) 96
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 93
Actin-like ATPase domain Actin-like ATPase domain 96
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 84
Homeodomain-like Homeodomain-like 82
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 84
P-loop containing nucleoside triphosphate hydrolases MOP-like 81
cAMP-binding domain-like "Winged helix" DNA-binding domain 81
Metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 85
P-loop containing nucleoside triphosphate hydrolases Translation proteins 87
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 85
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 86
HlyD-like secretion proteins HlyD-like secretion proteins 83
Thiolase-like Thiolase-like 82
Folate-binding domain Aminomethyltransferase beta-barrel domain 76
Formate dehydrogenase/DMSO reductase, domains 1-3 ADC-like 74
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 74
lambda repressor-like DNA-binding domains RmlC-like cupins 71
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 73
PYP-like sensor domain (PAS domain) Nucleotide cyclase 64
2Fe-2S ferredoxin-like Riboflavin synthase domain-like 62
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein S5 domain 2-like 64
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 65
HAD-like Calcium ATPase, transmembrane domain M 64
PYP-like sensor domain (PAS domain) EAL domain-like 64
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 61
Calcium ATPase, transduction domain A HAD-like 64
2Fe-2S ferredoxin-like Ferredoxin reductase-like, C-terminal NADP-linked domain 62
PurM N-terminal domain-like PurM C-terminal domain-like 62
2Fe-2S ferredoxin-like CO dehydrogenase ISP C-domain like 61
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 64
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 61
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 62
Trypsin-like serine proteases PDZ domain-like 53
CheY-like P-loop containing nucleoside triphosphate hydrolases 52
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 54
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 54
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 52
"Winged helix" DNA-binding domain PLP-dependent transferases 51
"Winged helix" DNA-binding domain Dimeric alpha+beta barrel 52
PYP-like sensor domain (PAS domain) CheY-like 54
PreATP-grasp domain Rudiment single hybrid motif 53
"Winged helix" DNA-binding domain GntR ligand-binding domain-like 51
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 53
HAMP domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 53
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 53
CO dehydrogenase molybdoprotein N-domain-like Molybdenum cofactor-binding domain 54
CheY-like Homeodomain-like 52
Lysozyme-like beta-lactamase/transpeptidase-like 53
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 51
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 41
HAMP domain-like Homodimeric domain of signal transducing histidine kinase 42
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 42
PDZ domain-like PDZ domain-like 42
PGBD-like L,D-transpeptidase catalytic domain-like 41
EF-G C-terminal domain-like EF-G C-terminal domain-like 43
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 41
Nucleic acid-binding proteins Nucleic acid-binding proteins 44
PLP-binding barrel Alanine racemase C-terminal domain-like 41
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 41
ISP domain Bet v1-like 42
CheY-like CheY-like 44
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 41
FKBP-like Triger factor/SurA peptide-binding domain-like 44
Translation proteins EF-G C-terminal domain-like 43
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 42
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 43
Molybdenum cofactor-binding domain Molybdenum cofactor-binding domain 43
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 41
FAD/NAD(P)-binding domain Folate-binding domain 43
FAD/NAD(P)-binding domain Aminomethyltransferase beta-barrel domain 43
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 32
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 31
Class I glutamine amidotransferase-like Homeodomain-like 31
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 32
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 33
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 31
ParB/Sulfiredoxin S-adenosyl-L-methionine-dependent methyltransferases 32
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 33
UDP-Glycosyltransferase/glycogen phosphorylase Nucleotide-diphospho-sugar transferases 33
ACT-like ACT-like 33
Succinyl-CoA synthetase domains Glutathione synthetase ATP-binding domain-like 32
Chemotaxis receptor methyltransferase CheR, N-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 32
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 31
Adenine nucleotide alpha hydrolases-like DHS-like NAD/FAD-binding domain 31
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 31
GAF domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 33
CBS-domain pair FAD-binding/transporter-associated domain-like 31
Oxidoreductase molybdopterin-binding domain E set domains 31
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 32
Class II aaRS and biotin synthetases Class II aaRS ABD-related 33
DHS-like NAD/FAD-binding domain Thiamin diphosphate-binding fold (THDP-binding) 32
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 33
FMN-linked oxidoreductases FAD/NAD(P)-binding domain 31
Chaperone J-domain HSP40/DnaJ peptide-binding domain 32
Methylesterase CheB, C-terminal domain CheY-like 32
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 33
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 32
P-loop containing nucleoside triphosphate hydrolases Hypothetical protein YjiA, C-terminal domain 31
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 33
Alpha-L RNA-binding motif Pseudouridine synthase 31
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 31
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 33
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 33
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 33
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 32
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 31
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 32
FAD-binding/transporter-associated domain-like CO dehydrogenase flavoprotein C-terminal domain-like 31
Nucleotidyltransferase Poly A polymerase C-terminal region-like 22
Translation proteins Ribosomal protein S5 domain 2-like 21
Cytochrome c oxidase subunit II-like, transmembrane region Cupredoxins 22
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 21
TrpR-like Ribonuclease H-like 21
Nucleotide-diphospho-sugar transferases RmlC-like cupins 21
Rhodanese/Cell cycle control phosphatase Rhodanese/Cell cycle control phosphatase 21
ThrRS/AlaRS common domain Class II aaRS and biotin synthetases 22
4Fe-4S ferredoxins Formate dehydrogenase/DMSO reductase, domains 1-3 22
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheW-like 21
MurCD N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
HCP-like HCP-like 22
TPR-like TPR-like 22
Urease, gamma-subunit Urease, beta-subunit 21
Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases 22
Metal cation-transporting ATPase, ATP-binding domain N HAD-like 21
Rudiment single hybrid motif Single hybrid motif 22
Histidine-containing phosphotransfer domain, HPT domain CheW-like 21
Nucleic acid-binding proteins Translation proteins SH3-like domain 22
Nqo1 FMN-binding domain-like Nqo1 middle domain-like 22
MFS general substrate transporter MFS general substrate transporter 22
GAF domain-like Homodimeric domain of signal transducing histidine kinase 22
PreATP-grasp domain Single hybrid motif 22
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex CoA-dependent acyltransferases 21
Calcium ATPase, transduction domain A Metal cation-transporting ATPase, ATP-binding domain N 21
FMN-binding split barrel UbiD C-terminal domain-like 22
"Winged helix" DNA-binding domain LexA/Signal peptidase 21
Urease metallochaperone UreE, N-terminal domain Urease metallochaperone UreE, C-terminal domain 21
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 22
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 21
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 22
Nitrite and sulphite reductase 4Fe-4S domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 21
lambda repressor-like DNA-binding domains Cyanase C-terminal domain 21
Single hybrid motif Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 21
Nitrite/Sulfite reductase N-terminal domain-like Nitrite/Sulfite reductase N-terminal domain-like 21
Glutathione synthetase ATP-binding domain-like Single hybrid motif 22
Thioesterase/thiol ester dehydrase-isomerase Thioesterase/thiol ester dehydrase-isomerase 21
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 21
Lysozyme-like PGBD-like 21
Metal cation-transporting ATPase, ATP-binding domain N Calcium ATPase, transmembrane domain M 21
C-terminal effector domain of the bipartite response regulators TPR-like 21
Homodimeric domain of signal transducing histidine kinase CheW-like 21
Cobalamin (vitamin B12)-dependent enzymes Cobalamin (vitamin B12)-binding domain 21
MurCD N-terminal domain MurD-like peptide ligases, catalytic domain 21
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 22
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 22
Nqo1 FMN-binding domain-like Nqo1C-terminal domain-like 22
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 21
Macro domain-like Zn-dependent exopeptidases 21
Nucleotidyltransferase Nucleotidyltransferase substrate binding subunit/domain 22
4'-phosphopantetheinyl transferase 4'-phosphopantetheinyl transferase 22
P-loop containing nucleoside triphosphate hydrolases Protein kinase-like (PK-like) 22
Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 22
Histidine-containing phosphotransfer domain, HPT domain Homodimeric domain of signal transducing histidine kinase 21
Nqo1 middle domain-like Nqo1C-terminal domain-like 22
tRNA-binding arm Class II aaRS and biotin synthetases 21
Nucleic acid-binding proteins RuvA domain 2-like 22
FAD-linked reductases, C-terminal domain Folate-binding domain 22
L30e-like alpha/beta knot 21
Enolase N-terminal domain-like Enolase C-terminal domain-like 21
"Winged helix" DNA-binding domain NagB/RpiA/CoA transferase-like 21
Sigma3 and sigma4 domains of RNA polymerase sigma factors CheY-like 21
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 21
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 21
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 22
Histidine-containing phosphotransfer domain, HPT domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 21
2Fe-2S ferredoxin-like 4Fe-4S ferredoxins 22
HAMP domain-like PYP-like sensor domain (PAS domain) 22
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 22
GAF domain-like P-loop containing nucleoside triphosphate hydrolases 22
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 22
PUA domain-like Ribosomal protein S5 domain 2-like 21
"Winged helix" DNA-binding domain GAF domain-like 21
Dimeric alpha+beta barrel Dimeric alpha+beta barrel 21
Pentapeptide repeat-like Pentapeptide repeat-like 21
FAD-linked reductases, C-terminal domain Aminomethyltransferase beta-barrel domain 22
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 22
MetI-like MetI-like 21
EF-G C-terminal domain-like Ribosomal protein S5 domain 2-like 21
Resolvase-like KorB DNA-binding domain-like 21
Penicillin binding protein dimerisation domain beta-lactamase/transpeptidase-like 21
Single hybrid motif CoA-dependent acyltransferases 21
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 21
2Fe-2S ferredoxin-like Formate dehydrogenase/DMSO reductase, domains 1-3 22
Cupredoxins Cupredoxins 21
Nucleotidyltransferase ACT-like 22
Galactose mutarotase-like E set domains 22
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
Homeodomain-like Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
Periplasmic binding protein-like II ACT-like 11
ADC synthase D-aminoacid aminotransferase-like PLP-dependent enzymes 11
ACP-like Trimeric LpxA-like enzymes 11
TolB, N-terminal domain Tricorn protease N-terminal domain 11
TPR-like S-adenosyl-L-methionine-dependent methyltransferases 11
GAF domain-like EAL domain-like 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
PHP14-like Phospholipase D/nuclease 11
Methyl-accepting chemotaxis protein (MCP) signaling domain Methyl-accepting chemotaxis protein (MCP) signaling domain 11
MgtE N-terminal domain-like MgtE membrane domain-like 11
Nucleic acid-binding proteins PheT/TilS domain 11
Formylmethanofuran:tetrahydromethanopterin formyltransferase Formylmethanofuran:tetrahydromethanopterin formyltransferase 11
Pectin lyase-like Pectin lyase-like 11
Methyl-accepting chemotaxis protein (MCP) signaling domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 11
L9 N-domain-like Ribosomal protein L9 C-domain 11
Nucleic acid-binding proteins Putative DNA-binding domain 11
Flavoproteins Ferredoxin reductase-like, C-terminal NADP-linked domain 11
UDP-Glycosyltransferase/glycogen phosphorylase UDP-Glycosyltransferase/glycogen phosphorylase 11
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 11
Ferritin-like HAD-like 11
NagB/RpiA/CoA transferase-like D-ribose-5-phosphate isomerase (RpiA), lid domain 11
PIN domain-like DNA/RNA polymerases 11
Ribonuclease H-like DNA/RNA polymerases 11
Glutamine synthetase/guanido kinase GatB/YqeY motif 11
PIN domain-like Ribonuclease H-like 11
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 11
MoeA N-terminal region -like Molybdenum cofactor biosynthesis proteins 11
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 11
beta-lactamase/transpeptidase-like Penicillin-binding protein associated domain 11
Nucleic acid-binding proteins Anticodon-binding domain of PheRS 11
FMN-dependent nitroreductase-like Tetrapyrrole methylase 11
Protein prenylyltransferase TPR-like 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
Peptidase/esterase 'gauge' domain alpha/beta-Hydrolases 11
Translation proteins Initiation factor IF2/eIF5b, domain 3 11
Homo-oligomeric flavin-containing Cys decarboxylases, HFCD CoaB-like 11
Trimeric LpxA-like enzymes Trimeric LpxA-like enzymes 11
Glutathione synthetase ATP-binding domain-like Cyclophilin-like 11
YjgF-like YjgF-like 11
Nudix "Winged helix" DNA-binding domain 11
Nucleotidylyl transferase tRNA-binding arm 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
Clc chloride channel CBS-domain pair 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Alpha subunit of glutamate synthase, C-terminal domain 11
Rubredoxin-like FAD/NAD(P)-binding domain 11
Chemotaxis receptor methyltransferase CheR, N-terminal domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
S-adenosyl-L-methionine-dependent methyltransferases Homodimeric domain of signal transducing histidine kinase 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 11
Zinc beta-ribbon Prokaryotic SH3-related domain 11
Fe-S cluster assembly (FSCA) domain-like P-loop containing nucleoside triphosphate hydrolases 11
GAF domain-like CheY-like 11
Ribbon-helix-helix ACT-like 11
GAF domain-like Nucleotide cyclase 11
RNase III domain-like dsRNA-binding domain-like 11
Tetrapyrrole methylase S-adenosyl-L-methionine-dependent methyltransferases 11
Cyclophilin-like PH0987 N-terminal domain-like 11
MFS general substrate transporter "Winged helix" DNA-binding domain 11
Single hybrid motif FAD/NAD(P)-binding domain 11
Cyclophilin-like Single hybrid motif 11
SIS domain CBS-domain pair 11
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 11
Transcription factor NusA, N-terminal domain Prokaryotic type KH domain (KH-domain type II) 11
PPK N-terminal domain-like Phospholipase D/nuclease 11
GAF domain-like Phosphohistidine domain 11
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 11
Transcription factor NusA, N-terminal domain Nucleic acid-binding proteins 11
Nucleic acid-binding proteins S-adenosyl-L-methionine-dependent methyltransferases 11
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 11
PH0987 N-terminal domain-like Single hybrid motif 11
HD-domain/PDEase-like TGS-like 11
Translation proteins "Winged helix" DNA-binding domain 11
Chemotaxis receptor methyltransferase CheR, N-terminal domain Homodimeric domain of signal transducing histidine kinase 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
Nucleic acid-binding proteins Prokaryotic type KH domain (KH-domain type II) 11
Bet v1-like Bet v1-like 11
UROD/MetE-like Cobalamin (vitamin B12)-binding domain 11
Zinc beta-ribbon DNA primase core 11
"Winged helix" DNA-binding domain Chorismate lyase-like 11
FAD/NAD(P)-binding domain Nitrite and sulphite reductase 4Fe-4S domain-like 11
Nucleic acid-binding proteins ArfGap/RecO-like zinc finger 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
GroEL-intermediate domain like GroEL apical domain-like 11
LysM domain Duplicated hybrid motif 11
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 11
Cytochrome c Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor 11
Rad51 N-terminal domain-like Rad51 N-terminal domain-like 11
S-adenosyl-L-methionine-dependent methyltransferases CheY-like 11
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 11
RBP11-like subunits of RNA polymerase C-terminal domain of RNA polymerase alpha subunit 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) Methylated DNA-protein cysteine methyltransferase domain 11
PreATP-grasp domain Cyclophilin-like 11
Chemotaxis receptor methyltransferase CheR, N-terminal domain CheY-like 11
HAD-like CBS-domain pair 11
FAD/NAD(P)-binding domain HI0933 insert domain-like 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
Resolvase-like Homeodomain-like 11
Nucleic acid-binding proteins GAD domain-like 11
Nucleotidyltransferase substrate binding subunit/domain Nucleotidyltransferase substrate binding subunit/domain 11
Siroheme synthase middle domains-like Tetrapyrrole methylase 11
FAD/NAD(P)-binding domain 4Fe-4S ferredoxins 11
Aminoacid dehydrogenase-like, N-terminal domain Isocitrate/Isopropylmalate dehydrogenase-like 11
Regulatory protein AraC Homeodomain-like 11
Multiheme cytochromes TPR-like 11
Rho N-terminal domain-like Nucleic acid-binding proteins 11
C-terminal UvrC-binding domain of UvrB RuvA domain 2-like 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
Ribonuclease H-like HRDC-like 11
PheT/TilS domain Anticodon-binding domain of PheRS 11
Elongation factor Ts (EF-Ts), dimerisation domain Elongation factor Ts (EF-Ts), dimerisation domain 11
MFS general substrate transporter Acetyl-CoA synthetase-like 11
Nucleotidylyl transferase Riboflavin kinase-like 11
DNA-glycosylase Nudix 11
Translation proteins PRC-barrel domain 11
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 11
PilZ domain-like PilZ domain-like 11
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 11
S13-like H2TH domain Glucocorticoid receptor-like (DNA-binding domain) 11
FAD-linked oxidoreductase ALDH-like 11
all-alpha NTP pyrophosphatases all-alpha NTP pyrophosphatases 11
CheY-like Nucleotide cyclase 11
Cytidine deaminase-like Dihydrofolate reductase-like 11
beta-lactamase/transpeptidase-like Sporulation related repeat 11
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
PUA domain-like alpha/beta knot 11
PP2C-like Protein kinase-like (PK-like) 11
GroEL equatorial domain-like GroEL-intermediate domain like 11
Poly A polymerase C-terminal region-like ACT-like 11
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 11
YlxR-like L30e-like 11
GAF domain-like Phosphoenolpyruvate/pyruvate domain 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Adenine nucleotide alpha hydrolases-like 11
Eukaryotic type KH-domain (KH-domain type I) Nucleic acid-binding proteins 11
P-loop containing nucleoside triphosphate hydrolases CarD-like 11
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 11
DNA clamp DNA clamp 11
Cobalamin (vitamin B12)-dependent enzymes B12-dependent dehydatase associated subunit 11
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 11
lambda integrase-like, N-terminal domain DNA breaking-rejoining enzymes 11
NAD(P)-binding Rossmann-fold domains Tetrapyrrole methylase 11
Sm-like ribonucleoproteins Mechanosensitive channel protein MscS (YggB), C-terminal domain 11
Ribosomal protein L6 Ribosomal protein L6 11
Glutathione synthetase ATP-binding domain-like PH0987 N-terminal domain-like 11
Succinyl-CoA synthetase domains Acyl-CoA N-acyltransferases (Nat) 11
Acetyl-CoA synthetase-like Trimeric LpxA-like enzymes 11
YjeF N-terminal domain-like Ribokinase-like 11
Sigma3 and sigma4 domains of RNA polymerase sigma factors TPR-like 11
Ferritin-like Calcium ATPase, transduction domain A 11
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 11
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 11
P-loop containing nucleoside triphosphate hydrolases TGS-like 11
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 11
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 11
DinB/YfiT-like putative metalloenzymes C-type lectin-like 11
Formyltransferase FMT C-terminal domain-like 11
Class II aaRS and biotin synthetases GAD domain-like 11
Fic-like "Winged helix" DNA-binding domain 11
NAD(P)-binding Rossmann-fold domains ACT-like 11
N-terminal domain of DnaB helicase P-loop containing nucleoside triphosphate hydrolases 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 11
N-terminal domain of bifunctional PutA protein FAD-linked oxidoreductase 11
Pectin lyase-like Autotransporter 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
Homodimeric domain of signal transducing histidine kinase Homodimeric domain of signal transducing histidine kinase 11
Transmembrane di-heme cytochromes a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
Acylphosphatase/BLUF domain-like YrdC/RibB 11
Rhodanese/Cell cycle control phosphatase Ankyrin repeat 11
Chemotaxis receptor methyltransferase CheR, N-terminal domain C-terminal effector domain of the bipartite response regulators 11
Thioredoxin-like Thioredoxin-like 11
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 11
Transcription factor NusA, N-terminal domain Rad51 N-terminal domain-like 11
cAMP-binding domain-like FAD/NAD(P)-binding domain 11
dUTPase-like dUTPase-like 11
Voltage-gated potassium channels cAMP-binding domain-like 11
Multiheme cytochromes Multiheme cytochromes 11
GIY-YIG endonuclease RuvA domain 2-like 11
GroEL equatorial domain-like GroEL apical domain-like 11
NAD(P)-binding Rossmann-fold domains Siroheme synthase middle domains-like 11
Thioredoxin-like Nqo1 middle domain-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase C-terminal effector domain of the bipartite response regulators 11
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 11
Nucleic acid-binding proteins BRCT domain 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
C-terminal effector domain of the bipartite response regulators P-loop containing nucleoside triphosphate hydrolases 11
HRDC-like HRDC-like 11
2Fe-2S ferredoxin-like alpha-helical ferredoxin 11
FAD-binding/transporter-associated domain-like Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain 11
Thioredoxin-like Nqo1C-terminal domain-like 11
P-loop containing nucleoside triphosphate hydrolases Dehydroquinate synthase-like 11
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 11
Amine oxidase N-terminal region Amine oxidase catalytic domain 11
Globin-like Methyl-accepting chemotaxis protein (MCP) signaling domain 11
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 11
Surface presentation of antigens (SPOA) Surface presentation of antigens (SPOA) 11
Radical SAM enzymes Nitrogenase accessory factor-like 11
Succinyl-CoA synthetase domains Succinyl-CoA synthetase domains 11
Prokaryotic type KH domain (KH-domain type II) Rad51 N-terminal domain-like 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
PheT/TilS domain Class II aaRS and biotin synthetases 11
Methylesterase CheB, C-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 11
Glucocorticoid receptor-like (DNA-binding domain) P-loop containing nucleoside triphosphate hydrolases 11
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 11
TGS-like ThrRS/AlaRS common domain 11
Prokaryotic type KH domain (KH-domain type II) Prokaryotic type KH domain (KH-domain type II) 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
Periplasmic binding protein-like II NosL/MerB-like 11
Ferritin-like Calcium ATPase, transmembrane domain M 11
HD-domain/PDEase-like ACT-like 11
P-loop containing nucleoside triphosphate hydrolases C-terminal UvrC-binding domain of UvrB 11
P-loop containing nucleoside triphosphate hydrolases HRDC-like 11
EspE N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
alpha-helical ferredoxin ARM repeat 11
Acetyl-CoA synthetase-like ACP-like 11
Actin-like ATPase domain HD-domain/PDEase-like 11
Flavoproteins Riboflavin synthase domain-like 11
Class II aaRS and biotin synthetases C-terminal domain of ProRS 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11
Type III secretion system domain Type III secretion system domain 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 11
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 11
HD-domain/PDEase-like Nucleotidyltransferase 11
Molybdenum cofactor-binding domain Cytochrome c 11
Methylglyoxal synthase-like Cytidine deaminase-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
OMPA-like OMPA-like 11
PHP domain-like AF1531-like 11
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 11
S-adenosyl-L-methionine-dependent methyltransferases C-terminal effector domain of the bipartite response regulators 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 11
TPR-like Sporulation related repeat 11
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 11
DNA ligase/mRNA capping enzyme, catalytic domain RuvA domain 2-like 11
6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 11
Carbon-nitrogen hydrolase Adenine nucleotide alpha hydrolases-like 11
GAF domain-like Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 11
Nucleotidyltransferase TGS-like 11
S-adenosyl-L-methionine-dependent methyltransferases ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
PPK N-terminal domain-like PHP14-like 11
Thioredoxin-like Six-hairpin glycosidases 11
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 11
N-terminal domain of MutM-like DNA repair proteins Glucocorticoid receptor-like (DNA-binding domain) 11
FAD-linked reductases, C-terminal domain 4Fe-4S ferredoxins 11
Carbamate kinase-like PUA domain-like 11
Riboflavin synthase domain-like Riboflavin synthase domain-like 11
FAD/NAD(P)-binding domain Nitrite/Sulfite reductase N-terminal domain-like 11
Cryptochrome/photolyase, N-terminal domain Cryptochrome/photolyase FAD-binding domain 11
Glutathione synthetase ATP-binding domain-like Phosphoenolpyruvate/pyruvate domain 11
"Winged helix" DNA-binding domain S-adenosyl-L-methionine-dependent methyltransferases 11
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 11
NagB/RpiA/CoA transferase-like NagB/RpiA/CoA transferase-like 11
4Fe-4S ferredoxins ADC-like 11
Prim-pol domain P-loop containing nucleoside triphosphate hydrolases 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
Nucleic acid-binding proteins Rad51 N-terminal domain-like 11
Single hybrid motif FAD/NAD-linked reductases, dimerisation (C-terminal) domain 11
CarD-like TRCF domain-like 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphoenolpyruvate/pyruvate domain 11
RuvA domain 2-like JAB1/MPN domain 11
TrmE connector domain P-loop containing nucleoside triphosphate hydrolases 11
Aspartate/glutamate racemase Aspartate/glutamate racemase 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
HAMP domain-like Nucleotide cyclase 11
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 11
TGS-like Class II aaRS and biotin synthetases 11
ClpP/crotonase NAD(P)-binding Rossmann-fold domains 11
Leukotriene A4 hydrolase N-terminal domain Metalloproteases ("zincins"), catalytic domain 11
UROD/MetE-like Methionine synthase domain 11
Adenine nucleotide alpha hydrolases-like Homodimeric domain of signal transducing histidine kinase 11
Methylesterase CheB, C-terminal domain C-terminal effector domain of the bipartite response regulators 11
Homeodomain-like SIS domain 11
PDZ domain-like ClpP/crotonase 11
Molybdenum cofactor biosynthesis proteins MoeA C-terminal domain-like 11
Prokaryotic type I DNA topoisomerase Zinc beta-ribbon 11
Glycerol-3-phosphate (1)-acyltransferase Acetyl-CoA synthetase-like 11
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 11
Bacterial muramidases Lysozyme-like 11
Nucleotide-binding domain Nucleotide-binding domain 11
Diaminopimelate epimerase-like Diaminopimelate epimerase-like 11
TGS-like ACT-like 11
PheT/TilS domain Putative DNA-binding domain 11
Nucleotidyltransferase Nucleotidyltransferase 11
FMN-linked oxidoreductases Alpha subunit of glutamate synthase, C-terminal domain 11
Concanavalin A-like lectins/glucanases Class I glutamine amidotransferase-like 11
Methyl-accepting chemotaxis protein (MCP) signaling domain CheY-like 11
NAD(P)-binding Rossmann-fold domains UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 11
Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), C-terminal domain 11
TGS-like Class II aaRS ABD-related 11
Sigma2 domain of RNA polymerase sigma factors TPR-like 11
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) Homeodomain-like 11
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 11
DnaK suppressor protein DksA, alpha-hairpin domain Glucocorticoid receptor-like (DNA-binding domain) 11
S-adenosyl-L-methionine-dependent methyltransferases EreA/ChaN-like 11
Terpenoid cyclases/Protein prenyltransferases Terpenoid cyclases/Protein prenyltransferases 11
Soluble quinoprotein glucose dehydrogenase Cytochrome c 11
ACT-like Formyltransferase 11
Nucleotidyltransferase substrate binding subunit/domain ACT-like 11
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain "Winged helix" DNA-binding domain 11
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 11
Adenine nucleotide alpha hydrolases-like GAF domain-like 11
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 11
Homodimeric domain of signal transducing histidine kinase C-terminal effector domain of the bipartite response regulators 11
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 11
FliG FliG 11
Methylesterase CheB, C-terminal domain Homodimeric domain of signal transducing histidine kinase 11
Methylesterase CheB, C-terminal domain Chemotaxis receptor methyltransferase CheR, N-terminal domain 11
Methionine synthase domain Cobalamin (vitamin B12)-binding domain 11
Rudiment single hybrid motif Cyclophilin-like 11
Adenine nucleotide alpha hydrolases-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
P-loop containing nucleoside triphosphate hydrolases Restriction endonuclease-like 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
MgtE N-terminal domain-like CBS-domain pair 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
Glutathione synthetase ATP-binding domain-like Acyl-CoA N-acyltransferases (Nat) 11
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 11
Phospholipase D/nuclease Phospholipase D/nuclease 11
YebC-like PFL-like glycyl radical enzymes 11
Quinoprotein alcohol dehydrogenase-like Cytochrome c 11
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 11
Thioredoxin-like Nqo1 FMN-binding domain-like 11
Methyl-accepting chemotaxis protein (MCP) signaling domain GAF domain-like 11
NAD(P)-binding Rossmann-fold domains Isocitrate/Isopropylmalate dehydrogenase-like 11
Rudiment single hybrid motif PH0987 N-terminal domain-like 11
P-loop containing nucleoside triphosphate hydrolases CBS-domain pair 11
P-loop containing nucleoside triphosphate hydrolases TrpR-like 11
N-acetylmuramoyl-L-alanine amidase-like PGBD-like 11
Aconitase iron-sulfur domain LeuD/IlvD-like 11
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 11
PreATP-grasp domain PreATP-grasp domain 11
RuvA domain 2-like DNA helicase RuvA subunit, C-terminal domain 11
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 11
NAD(P)-binding Rossmann-fold domains Acyl-CoA N-acyltransferases (Nat) 11
GIY-YIG endonuclease C-terminal UvrC-binding domain of UvrB 11
CO dehydrogenase molybdoprotein N-domain-like Cytochrome c 11
alpha-helical ferredoxin Nucleotide-binding domain 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
RuvA domain 2-like BRCT domain 11
Triger factor/SurA peptide-binding domain-like Triger factor/SurA peptide-binding domain-like 11
MoeA N-terminal region -like MoeA C-terminal domain-like 11
Thioredoxin-like FAD/NAD(P)-binding domain 11
Alpha-L RNA-binding motif S-adenosyl-L-methionine-dependent methyltransferases 11
Cupredoxins Cytochrome c 11
Methyl-accepting chemotaxis protein (MCP) signaling domain Homodimeric domain of signal transducing histidine kinase 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 11
Nucleotide-diphospho-sugar transferases IpsF-like 11
GreA transcript cleavage protein, N-terminal domain FKBP-like 11
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
FMN-dependent nitroreductase-like FMN-dependent nitroreductase-like 11
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 11
Nucleotide-diphospho-sugar transferases PilZ domain-like 11
Radical SAM enzymes Radical SAM enzymes 11
Class II aaRS and biotin synthetases Translation proteins 11
Hypothetical protein SAV1430 Fe-S cluster assembly (FSCA) domain-like 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 11
Thioredoxin-like TPR-like 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 11
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphohistidine domain 11
Carbamate kinase-like ACT-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 11
HMA, heavy metal-associated domain HAD-like 11
TerB-like Chaperone J-domain 11
Nucleic acid-binding proteins DNA helicase RuvA subunit, C-terminal domain 11
Protein kinase-like (PK-like) WD40 repeat-like 11
PK beta-barrel domain-like PK C-terminal domain-like 11
5' to 3' exonuclease, C-terminal subdomain Ribonuclease H-like 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 11
5' to 3' exonuclease, C-terminal subdomain DNA/RNA polymerases 11
ClpP/crotonase ClpP/crotonase 11
Methylated DNA-protein cysteine methyltransferase domain Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 11
YhbC-like, N-terminal domain YhbC-like, C-terminal domain 11
AGR C 984p-like AGR C 984p-like 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 11
ClpP/crotonase 6-phosphogluconate dehydrogenase C-terminal domain-like 11
HAMP domain-like EAL domain-like 11
Trigger factor ribosome-binding domain FKBP-like 11
Nucleotidyltransferase substrate binding subunit/domain Poly A polymerase C-terminal region-like 11
Barwin-like endoglucanases Sporulation related repeat 11
Translation proteins Translation proteins 11
S-adenosyl-L-methionine-dependent methyltransferases S-adenosyl-L-methionine-dependent methyltransferases 11
Rho N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
Methylesterase CheB, C-terminal domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
N-terminal domain of bifunctional PutA protein ALDH-like 11
Homeodomain-like Methylated DNA-protein cysteine methyltransferase domain 11
Hsp33 domain HSP33 redox switch-like 11
PreATP-grasp domain PH0987 N-terminal domain-like 11
Amine oxidase N-terminal region Amine oxidase N-terminal region 11
PreATP-grasp domain Methylglyoxal synthase-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FMN-linked oxidoreductases 11
MFS general substrate transporter Glycerol-3-phosphate (1)-acyltransferase 11
Putative DNA-binding domain Anticodon-binding domain of PheRS 11
PEP carboxykinase-like Nucleotide-diphospho-sugar transferases 11
Class II aaRS ABD-related C-terminal domain of ProRS 11
CBS-domain pair MgtE membrane domain-like 11
YrdC/RibB RibA-like 11
Translation proteins ThrRS/AlaRS common domain 11
PEP carboxykinase N-terminal domain PEP carboxykinase-like 11
2Fe-2S ferredoxin-like ADC-like 11
lambda repressor-like DNA-binding domains LexA/Signal peptidase 11
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 11
NAD(P)-binding Rossmann-fold domains Glutathione synthetase ATP-binding domain-like 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain ACT-like 11
LysM domain LysM domain 11
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 11
PGBD-like PGBD-like 11
Cyclophilin-like Cyclophilin-like 11

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