SUPERFAMILY 1.75 HMM library and genome assignments server

Domain combination pairs in Helicobacter cetorum MIT 00-7128

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

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Adjacent domain pairs graph

Graph of adjacent domain pairs.


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Domain combination pairs

367 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 1511
HCP-like HCP-like 85
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 83
Actin-like ATPase domain Actin-like ATPase domain 74
P-loop containing nucleoside triphosphate hydrolases Translation proteins 65
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 66
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 54
PurM N-terminal domain-like PurM C-terminal domain-like 52
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 53
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 41
PLP-binding barrel Alanine racemase C-terminal domain-like 42
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 41
P-loop containing nucleoside triphosphate hydrolases Restriction endonuclease-like 44
Metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 43
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 42
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein S5 domain 2-like 44
P-loop containing nucleoside triphosphate hydrolases S-adenosyl-L-methionine-dependent methyltransferases 43
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 43
CheW-like CheY-like 42
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 33
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 33
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 32
Calcium ATPase, transmembrane domain M HAD-like 33
Calcium ATPase, transduction domain A HAD-like 33
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB transmembrane domain 32
CheY-like C-terminal effector domain of the bipartite response regulators 31
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 32
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 33
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 33
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 33
Class II aaRS and biotin synthetases Class II aaRS ABD-related 33
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 33
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 32
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 32
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 33
Translation proteins EF-G C-terminal domain-like 32
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 32
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB transmembrane domain 32
DNA methylase specificity domain DNA methylase specificity domain 32
EF-G C-terminal domain-like EF-G C-terminal domain-like 32
HMA, heavy metal-associated domain HAD-like 33
Cytochrome c Cytochrome c 32
Formate dehydrogenase/DMSO reductase, domains 1-3 ADC-like 32
NAD(P)-binding Rossmann-fold domains ACT-like 22
Restriction endonuclease-like S-adenosyl-L-methionine-dependent methyltransferases 22
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 21
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 22
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 21
GroES-like NAD(P)-binding Rossmann-fold domains 21
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 21
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 22
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 21
TPR-like TPR-like 22
Aldolase AFP III-like domain 21
Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 21
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 22
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 21
CheC-like Surface presentation of antigens (SPOA) 22
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 21
Zinc beta-ribbon DNA primase core 21
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 22
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 21
Urease, gamma-subunit Urease, beta-subunit 21
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 22
Nucleic acid-binding proteins Nucleic acid-binding proteins 22
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 21
Penicillin binding protein dimerisation domain beta-lactamase/transpeptidase-like 21
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 21
Chaperone J-domain HSP40/DnaJ peptide-binding domain 22
MoeA N-terminal region -like Molybdenum cofactor biosynthesis proteins 21
Phospholipase D/nuclease Phospholipase D/nuclease 22
Alpha-L RNA-binding motif Pseudouridine synthase 21
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 22
tRNA-binding arm Class II aaRS and biotin synthetases 21
Nucleic acid-binding proteins RuvA domain 2-like 22
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 21
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 22
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 22
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 22
PreATP-grasp domain Rudiment single hybrid motif 21
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 22
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
ThrRS/AlaRS common domain Class II aaRS and biotin synthetases 22
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 21
Translation proteins SH3-like domain Nucleic acid-binding proteins 22
Voltage-gated potassium channels TrkA C-terminal domain-like 11
PDZ domain-like PDZ domain-like 11
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
SufE/NifU Fe-S cluster assembly (FSCA) domain-like 11
Ribosomal protein L6 Ribosomal protein L6 11
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 11
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
FliG FliG 11
Trypsin-like serine proteases PDZ domain-like 11
CBS-domain pair FAD-binding/transporter-associated domain-like 11
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 11
2Fe-2S ferredoxin-like 4Fe-4S ferredoxins 11
Carbamate kinase-like ACT-like 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
Enolase N-terminal domain-like Enolase C-terminal domain-like 11
5' to 3' exonuclease, C-terminal subdomain Ribonuclease H-like 11
FMN-binding split barrel FMN-binding split barrel 11
Cytidine deaminase-like Dihydrofolate reductase-like 11
ParB/Sulfiredoxin KorB DNA-binding domain-like 11
Nucleic acid-binding proteins Anticodon-binding domain of PheRS 11
Riboflavin synthase domain-like Riboflavin synthase domain-like 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
RuvA domain 2-like DNA helicase RuvA subunit, C-terminal domain 11
Ribonuclease H-like DNA/RNA polymerases 11
Prokaryotic type I DNA topoisomerase Zinc beta-ribbon 11
Voltage-gated potassium channels NAD(P)-binding Rossmann-fold domains 11
S-adenosyl-L-methionine-dependent methyltransferases S-adenosyl-L-methionine-dependent methyltransferases 11
Glutamine synthetase/guanido kinase GatB/YqeY motif 11
GIY-YIG endonuclease C-terminal UvrC-binding domain of UvrB 11
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 11
P-loop containing nucleoside triphosphate hydrolases TrpR-like 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 11
FAD-binding/transporter-associated domain-like alpha-helical ferredoxin 11
DNA ligase/mRNA capping enzyme, catalytic domain RuvA domain 2-like 11
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
Ribosomal protein S5 domain 2-like HSP90 C-terminal domain 11
PPK N-terminal domain-like Phospholipase D/nuclease 11
MurCD N-terminal domain MurD-like peptide ligases, catalytic domain 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Nucleic acid-binding proteins 11
Nucleotidylyl transferase tRNA-binding arm 11
NAD(P)-binding Rossmann-fold domains Serine metabolism enzymes domain 11
FAD-binding/transporter-associated domain-like Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 11
Fibronectin type III Fibronectin type III 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Eukaryotic type KH-domain (KH-domain type I) 11
YbaK/ProRS associated domain Class II aaRS ABD-related 11
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 11
NAD(P)-binding Rossmann-fold domains Glutamyl tRNA-reductase dimerization domain 11
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 11
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 11
HAMP domain-like Homodimeric domain of signal transducing histidine kinase 11
Translation proteins Initiation factor IF2/eIF5b, domain 3 11
Histidine-containing phosphotransfer domain, HPT domain CheY-like 11
PIN domain-like Ribonuclease H-like 11
PreATP-grasp domain Methylglyoxal synthase-like 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
DNA clamp DNA clamp 11
Sm-like ribonucleoproteins Mechanosensitive channel protein MscS (YggB), C-terminal domain 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
2Fe-2S ferredoxin-like alpha-helical ferredoxin 11
Translation proteins Translation proteins 11
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 11
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 11
Acyl-CoA N-acyltransferases (Nat) Acyl-CoA N-acyltransferases (Nat) 11
Metal cation-transporting ATPase, ATP-binding domain N HAD-like 11
GIY-YIG endonuclease RuvA domain 2-like 11
PHP domain-like AF1531-like 11
Histidine-containing phosphotransfer domain, HPT domain Homodimeric domain of signal transducing histidine kinase 11
Nucleotidylyl transferase Riboflavin kinase-like 11
FKBP-like Triger factor/SurA peptide-binding domain-like 11
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 11
Ribulose-phoshate binding barrel Ribulose-phoshate binding barrel 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
CarD-like TRCF domain-like 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
Translation proteins ThrRS/AlaRS common domain 11
HD-domain/PDEase-like Nucleotidyltransferase 11
2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain Alkaline phosphatase-like 11
Rhodanese/Cell cycle control phosphatase Adenine nucleotide alpha hydrolases-like 11
Macro domain-like Zn-dependent exopeptidases 11
Peptide methionine sulfoxide reductase Mss4-like 11
Nucleotide-diphospho-sugar transferases IpsF-like 11
Calcium ATPase, transduction domain A Metal cation-transporting ATPase, ATP-binding domain N 11
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 11
DNA repair protein MutS, domain III SMR domain-like 11
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
TolB, N-terminal domain Tricorn protease N-terminal domain 11
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 11
Aconitase B, N-terminal domain LeuD/IlvD-like 11
Translation proteins PRC-barrel domain 11
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 11
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 11
PUA domain-like Ribosomal protein S5 domain 2-like 11
Protein kinase-like (PK-like) Phospholipase D/nuclease 11
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 11
Ribbon-helix-helix ACT-like 11
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 11
Flagellar hook protein flgE Flagellar hook protein flgE 11
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 11
Acylphosphatase/BLUF domain-like YrdC/RibB 11
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
RuvA domain 2-like BRCT domain 11
Metal cation-transporting ATPase, ATP-binding domain N Calcium ATPase, transmembrane domain M 11
Acylphosphatase/BLUF domain-like Actin-like ATPase domain 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 11
Formate/glycerate dehydrogenase catalytic domain-like ACT-like 11
Domain of the SRP/SRP receptor G-proteins Signal peptide-binding domain 11
Eukaryotic type KH-domain (KH-domain type I) HD-domain/PDEase-like 11
Rho N-terminal domain-like Nucleic acid-binding proteins 11
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 11
C-terminal UvrC-binding domain of UvrB RuvA domain 2-like 11
Nucleotidylyl transferase Nucleic acid-binding proteins 11
R1 subunit of ribonucleotide reductase, N-terminal domain PFL-like glycyl radical enzymes 11
LeuD/IlvD-like Aconitase iron-sulfur domain 11
Glutamyl tRNA-reductase catalytic, N-terminal domain Glutamyl tRNA-reductase dimerization domain 11
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 11
Urease metallochaperone UreE, N-terminal domain Urease metallochaperone UreE, C-terminal domain 11
CheY-like P-loop containing nucleoside triphosphate hydrolases 11
Class II aaRS and biotin synthetases GAD domain-like 11
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
Glutathione synthetase ATP-binding domain-like Phosphoenolpyruvate/pyruvate domain 11
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 11
YhbC-like, N-terminal domain YhbC-like, C-terminal domain 11
PHP14-like Phospholipase D/nuclease 11
Class II aaRS and biotin synthetases YbaK/ProRS associated domain 11
Transmembrane di-heme cytochromes a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
Homo-oligomeric flavin-containing Cys decarboxylases, HFCD CoaB-like 11
Homodimeric domain of signal transducing histidine kinase CheY-like 11
L9 N-domain-like Ribosomal protein L9 C-domain 11
4Fe-4S ferredoxins Formate dehydrogenase/DMSO reductase, domains 1-3 11
HD-domain/PDEase-like TGS-like 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
FMN-binding split barrel UbiD C-terminal domain-like 11
Rhodanese/Cell cycle control phosphatase Rhodanese/Cell cycle control phosphatase 11
Ribosomal protein S5 domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 11
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 11
Histidine-containing phosphotransfer domain, HPT domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 11
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 11
PYP-like sensor domain (PAS domain) Methyl-accepting chemotaxis protein (MCP) signaling domain 11
P-loop containing nucleoside triphosphate hydrolases ACT-like 11
YrdC/RibB RibA-like 11
GroEL-intermediate domain like GroEL apical domain-like 11
Nucleotidyltransferase Poly A polymerase C-terminal region-like 11
Putative DNA-binding domain Anticodon-binding domain of PheRS 11
P-loop containing nucleoside triphosphate hydrolases C-terminal UvrC-binding domain of UvrB 11
Ribonuclease PH domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 11
Formyltransferase FMT C-terminal domain-like 11
MurCD N-terminal domain MurD-like peptide ligases, peptide-binding domain 11
NAD(P)-binding Rossmann-fold domains TrkA C-terminal domain-like 11
PPK N-terminal domain-like PHP14-like 11
Ribokinase-like Nucleotidylyl transferase 11
Enolase C-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), C-terminal domain 11
PDZ domain-like ClpP/crotonase 11
Nucleic acid-binding proteins BRCT domain 11
ACT-like Formyltransferase 11
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 11
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain ACT-like 11
Nucleotide-diphospho-sugar transferases S-adenosyl-L-methionine-dependent methyltransferases 11
YrdC/RibB Actin-like ATPase domain 11
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 11
Glutamyl tRNA-reductase catalytic, N-terminal domain NAD(P)-binding Rossmann-fold domains 11
FAD-linked oxidases, C-terminal domain alpha-helical ferredoxin 11
ACT-like ACT-like 11
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 11
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 11
Diaminopimelate epimerase-like Diaminopimelate epimerase-like 11
Actin-like ATPase domain HD-domain/PDEase-like 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 11
Transcription factor NusA, N-terminal domain Nucleic acid-binding proteins 11
Formate/glycerate dehydrogenase catalytic domain-like Serine metabolism enzymes domain 11
Nucleic acid-binding proteins DNA helicase RuvA subunit, C-terminal domain 11
NagB/RpiA/CoA transferase-like alpha-helical ferredoxin 11
P-loop containing nucleoside triphosphate hydrolases CarD-like 11
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 11
S-adenosyl-L-methionine-dependent methyltransferases DNA methylase specificity domain 11
PIN domain-like DNA/RNA polymerases 11
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 11
PreATP-grasp domain PreATP-grasp domain 11
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
Eukaryotic type KH-domain (KH-domain type I) Nucleic acid-binding proteins 11
Rho N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
Translation proteins "Winged helix" DNA-binding domain 11
Fe-S cluster assembly (FSCA) domain-like P-loop containing nucleoside triphosphate hydrolases 11
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 11
DeoB insert domain-like Alkaline phosphatase-like 11
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 11
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 11
Class II aaRS and biotin synthetases Translation proteins 11
ADC synthase D-aminoacid aminotransferase-like PLP-dependent enzymes 11
HCP-like TPR-like 11
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
L,D-transpeptidase catalytic domain-like NTF2-like 11
Barwin-like endoglucanases Sporulation related repeat 11
Nucleic acid-binding proteins Prokaryotic type KH domain (KH-domain type II) 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
Zinc beta-ribbon Prokaryotic SH3-related domain 11
Serine metabolism enzymes domain ACT-like 11
5' to 3' exonuclease, C-terminal subdomain DNA/RNA polymerases 11
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 11
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
HMA, heavy metal-associated domain Metal cation-transporting ATPase, ATP-binding domain N 11
RBP11-like subunits of RNA polymerase C-terminal domain of RNA polymerase alpha subunit 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
Rhodanese/Cell cycle control phosphatase P-loop containing nucleoside triphosphate hydrolases 11
Nucleic acid-binding proteins GAD domain-like 11
Lysozyme-like beta-lactamase/transpeptidase-like 11
Lysozyme-like LysM domain 11
2Fe-2S ferredoxin-like Formate dehydrogenase/DMSO reductase, domains 1-3 11
Aconitase B, N-terminal domain Aconitase iron-sulfur domain 11
GroEL equatorial domain-like GroEL apical domain-like 11
Periplasmic binding protein-like II ACT-like 11
P-loop containing nucleoside triphosphate hydrolases TGS-like 11
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases SMR domain-like 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Nucleic acid-binding proteins 11
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Nucleotide-diphospho-sugar transferases RmlC-like cupins 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 11
GreA transcript cleavage protein, N-terminal domain FKBP-like 11
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 11
DsbB-like NHL repeat 11
beta and beta-prime subunits of DNA dependent RNA-polymerase beta and beta-prime subunits of DNA dependent RNA-polymerase 11
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 11
Methylated DNA-protein cysteine methyltransferase domain Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
Thiolase-like Thiolase-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheW-like 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
MetI-like Periplasmic binding protein-like II 11
Homodimeric domain of signal transducing histidine kinase CheW-like 11
EF-G C-terminal domain-like Ribosomal protein S5 domain 2-like 11
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 11
YjeF N-terminal domain-like Ribokinase-like 11
Trigger factor ribosome-binding domain FKBP-like 11
UbiD C-terminal domain-like UbiD C-terminal domain-like 11
GroEL equatorial domain-like GroEL-intermediate domain like 11
Zinc beta-ribbon Zinc beta-ribbon 11
Aspartate/glutamate racemase Aspartate/glutamate racemase 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheY-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase HSP90 C-terminal domain 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 11
Nucleotidyltransferase TGS-like 11
Histidine-containing phosphotransfer domain, HPT domain CheW-like 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 11
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 11
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 11
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
Alpha-L RNA-binding motif S-adenosyl-L-methionine-dependent methyltransferases 11
N-terminal domain of DnaB helicase P-loop containing nucleoside triphosphate hydrolases 11
Nucleic acid-binding proteins Putative DNA-binding domain 11
L30e-like alpha/beta knot 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
Translation proteins Ribosomal protein S5 domain 2-like 11
RNase III domain-like dsRNA-binding domain-like 11
Transcription factor NusA, N-terminal domain Prokaryotic type KH domain (KH-domain type II) 11
FAD-linked oxidoreductase ALDH-like 11
HAMP domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 11

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