SUPERFAMILY 1.75 HMM library and genome assignments server

Domain combination pairs in Geobacter sulfurreducens KN400

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

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Adjacent domain pairs graph

Graph of adjacent domain pairs.


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Domain combination pairs

740 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 8648
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 4629
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 4125
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 285
CheY-like Homeodomain-like 263
CheY-like P-loop containing nucleoside triphosphate hydrolases 263
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 2414
HAMP domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 239
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheY-like 2319
HAMP domain-like Homodimeric domain of signal transducing histidine kinase 239
PYP-like sensor domain (PAS domain) CheY-like 2217
Homodimeric domain of signal transducing histidine kinase CheY-like 2218
Multiheme cytochromes Multiheme cytochromes 2213
PYP-like sensor domain (PAS domain) PYP-like sensor domain (PAS domain) 1816
GAF domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 1614
GAF domain-like Homodimeric domain of signal transducing histidine kinase 1412
Actin-like ATPase domain Actin-like ATPase domain 134
PYP-like sensor domain (PAS domain) Nucleotide cyclase 128
PYP-like sensor domain (PAS domain) GAF domain-like 1110
P-loop containing nucleoside triphosphate hydrolases Translation proteins 117
CheY-like Nucleotide cyclase 116
HAMP domain-like PYP-like sensor domain (PAS domain) 105
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 106
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 105
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein S5 domain 2-like 97
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Histidine-containing phosphotransfer domain, HPT domain 96
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 92
Homodimeric domain of signal transducing histidine kinase Histidine-containing phosphotransfer domain, HPT domain 96
Nucleotide cyclase EAL domain-like 86
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 85
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 85
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 82
"Winged helix" DNA-binding domain Periplasmic binding protein-like II 81
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB transmembrane domain 85
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB transmembrane domain 85
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 85
PYP-like sensor domain (PAS domain) EAL domain-like 86
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 87
Triger factor/SurA peptide-binding domain-like FKBP-like 74
Homeodomain-like Tetracyclin repressor-like, C-terminal domain 71
Sensory domain-like Homodimeric domain of signal transducing histidine kinase 76
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 73
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 74
TPR-like TPR-like 75
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 72
GAF domain-like CheY-like 77
Sensory domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 76
Calcium ATPase, transduction domain A HAD-like 64
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 65
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 63
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 65
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 63
Translation proteins EF-G C-terminal domain-like 63
Methyl-accepting chemotaxis protein (MCP) signaling domain Methyl-accepting chemotaxis protein (MCP) signaling domain 64
EF-G C-terminal domain-like EF-G C-terminal domain-like 52
GAF domain-like Nucleotide cyclase 54
"Winged helix" DNA-binding domain GAF domain-like 51
Sensory domain-like HAMP domain-like 54
PurM N-terminal domain-like PurM C-terminal domain-like 52
Sm-like ribonucleoproteins Mechanosensitive channel protein MscS (YggB), C-terminal domain 53
Cytochrome c Cytochrome c 54
EspE N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 53
Cobalamin (vitamin B12)-binding domain Radical SAM enzymes 52
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 52
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 53
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 53
Rhodanese/Cell cycle control phosphatase Rhodanese/Cell cycle control phosphatase 55
ACT-like ACT-like 53
Nucleic acid-binding proteins Nucleic acid-binding proteins 54
HAD-like Calcium ATPase, transmembrane domain M 53
Thiolase-like Thiolase-like 52
CheY-like Histidine-containing phosphotransfer domain, HPT domain 53
CheY-like C-terminal effector domain of the bipartite response regulators 51
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 53
GAF domain-like GAF domain-like 44
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 43
2Fe-2S ferredoxin-like 4Fe-4S ferredoxins 43
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 42
Nucleotidyltransferase Poly A polymerase C-terminal region-like 43
Formate dehydrogenase/DMSO reductase, domains 1-3 ADC-like 42
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 44
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 43
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 43
CheY-like HD-domain/PDEase-like 41
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 43
TrkA C-terminal domain-like TrkA C-terminal domain-like 42
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheW-like 43
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 42
Homodimeric domain of signal transducing histidine kinase CheW-like 43
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 42
Chemotaxis receptor methyltransferase CheR, N-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 41
Phospholipase D/nuclease Phospholipase D/nuclease 43
PLP-binding barrel Alanine racemase C-terminal domain-like 42
Histidine-containing phosphotransfer domain, HPT domain CheW-like 43
Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), C-terminal domain 42
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 43
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 43
PreATP-grasp domain Rudiment single hybrid motif 43
Class II aaRS and biotin synthetases Class II aaRS ABD-related 43
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex CoA-dependent acyltransferases 31
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 33
lambda repressor-like DNA-binding domains RmlC-like cupins 31
Translation proteins SH3-like domain Nucleic acid-binding proteins 32
Cupredoxins Cupredoxins 33
Translation proteins Ribosomal protein S5 domain 2-like 31
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 33
NAD(P)-binding Rossmann-fold domains ACT-like 33
Chaperone J-domain HSP40/DnaJ peptide-binding domain 32
PYP-like sensor domain (PAS domain) Homeodomain-like 32
Single hybrid motif Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 31
Nqo1 FMN-binding domain-like Nqo1 middle domain-like 33
E set domains E set domains 33
HlyD-like secretion proteins HlyD-like secretion proteins 32
Multiheme cytochromes PKD domain 33
GroES-like NAD(P)-binding Rossmann-fold domains 31
"Winged helix" DNA-binding domain GntR ligand-binding domain-like 31
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 32
HAMP domain-like CheY-like 32
2Fe-2S ferredoxin-like Formate dehydrogenase/DMSO reductase, domains 1-3 32
Aconitase iron-sulfur domain LeuD/IlvD-like 33
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 32
Nqo1 middle domain-like Nqo1C-terminal domain-like 33
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 32
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 33
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 32
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 33
GAF domain-like HD-domain/PDEase-like 33
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 32
Nucleic acid-binding proteins RuvA domain 2-like 33
TPR-like UDP-Glycosyltransferase/glycogen phosphorylase 33
Single hybrid motif CoA-dependent acyltransferases 31
EF-G C-terminal domain-like Ribosomal protein S5 domain 2-like 31
Nqo1 FMN-binding domain-like Nqo1C-terminal domain-like 33
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 31
PYP-like sensor domain (PAS domain) P-loop containing nucleoside triphosphate hydrolases 32
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 33
Thiamin diphosphate-binding fold (THDP-binding) 4Fe-4S ferredoxins 33
Alpha-L RNA-binding motif Pseudouridine synthase 31
Composite domain of metallo-dependent hydrolases Metallo-dependent hydrolases 33
PUA domain-like Ribosomal protein S5 domain 2-like 33
CheY-like Methylesterase CheB, C-terminal domain 31
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 33
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 32
4Fe-4S ferredoxins Formate dehydrogenase/DMSO reductase, domains 1-3 32
Aldehyde ferredoxin oxidoreductase, N-terminal domain Aldehyde ferredoxin oxidoreductase, C-terminal domains 21
Glutathione synthetase ATP-binding domain-like Phosphoenolpyruvate/pyruvate domain 22
HAMP domain-like Histidine-containing phosphotransfer domain, HPT domain 21
Nucleotidyltransferase Nucleotidyltransferase substrate binding subunit/domain 22
LysM domain LysM domain 22
Penicillin binding protein dimerisation domain beta-lactamase/transpeptidase-like 22
Metal cation-transporting ATPase, ATP-binding domain N Calcium ATPase, transmembrane domain M 21
PDZ domain-like PDZ domain-like 22
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 21
PUA domain-like S-adenosyl-L-methionine-dependent methyltransferases 21
CheY-like PilZ domain-like 21
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
Nqo5-like HydB/Nqo4-like 22
Glycerol-3-phosphate (1)-acyltransferase Acetyl-CoA synthetase-like 22
6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 21
OMPA-like OmpA-like 22
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 21
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 22
DHH phosphoesterases CBS-domain pair 22
NAD(P)-binding Rossmann-fold domains UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 21
cAMP-binding domain-like "Winged helix" DNA-binding domain 21
Cadherin-like Cadherin-like 22
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 22
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 21
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
P-loop containing nucleoside triphosphate hydrolases Restriction endonuclease-like 22
Trypsin-like serine proteases PDZ domain-like 22
alpha-helical ferredoxin Nucleotide-binding domain 22
Periplasmic binding protein-like II Homodimeric domain of signal transducing histidine kinase 22
MurCD N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
CheY-like EAL domain-like 22
HAMP domain-like GAF domain-like 22
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 22
PDZ domain-like ClpP/crotonase 21
CheY-like CheY-like 22
ThrRS/AlaRS common domain Class II aaRS and biotin synthetases 22
GAF domain-like EAL domain-like 21
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 22
Calcium ATPase, transduction domain A Metal cation-transporting ATPase, ATP-binding domain N 21
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 22
EspE N-terminal domain-like CheY-like 22
Radical SAM enzymes TPR-like 22
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 21
EspE N-terminal domain-like EspE N-terminal domain-like 22
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 22
Cytochrome c Periplasmic binding protein-like I 21
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 21
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 22
FMN-binding split barrel UbiD C-terminal domain-like 22
Thioredoxin-like Nqo1 middle domain-like 22
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 21
Terpenoid cyclases/Protein prenyltransferases Terpenoid cyclases/Protein prenyltransferases 21
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 22
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
HAMP domain-like Methyl-accepting chemotaxis protein (MCP) signaling domain 21
2Fe-2S ferredoxin-like ADC-like 21
Nucleic acid-binding proteins S-adenosyl-L-methionine-dependent methyltransferases 22
NagB/RpiA/CoA transferase-like NagB/RpiA/CoA transferase-like 21
gp5 N-terminal domain-like Phage fibre proteins 22
Thioredoxin-like Nqo1 FMN-binding domain-like 22
Multiheme cytochromes E set domains 22
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 21
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 22
HAMP domain-like Nucleotide cyclase 22
P-loop containing nucleoside triphosphate hydrolases MOP-like 21
Transposase IS200-like TrpR-like 21
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphoenolpyruvate/pyruvate domain 22
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 22
Ferritin-like Rubredoxin-like 21
Metal cation-transporting ATPase, ATP-binding domain N HAD-like 21
Sensory domain-like Methyl-accepting chemotaxis protein (MCP) signaling domain 22
Thioredoxin-like Nqo1C-terminal domain-like 22
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 21
Periplasmic binding protein-like II ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 22
DnaK suppressor protein DksA, alpha-hairpin domain Glucocorticoid receptor-like (DNA-binding domain) 21
GreA transcript cleavage protein, N-terminal domain FKBP-like 21
MurCD N-terminal domain MurD-like peptide ligases, catalytic domain 21
tRNA-binding arm Class II aaRS and biotin synthetases 21
P-loop containing nucleoside triphosphate hydrolases HprK N-terminal domain-like 21
Rudiment single hybrid motif Single hybrid motif 22
PYP-like sensor domain (PAS domain) Histidine-containing phosphotransfer domain, HPT domain 21
TK C-terminal domain-like 4Fe-4S ferredoxins 22
4Fe-4S ferredoxins ADC-like 21
Nucleotidyltransferase ACT-like 22
CBS-domain pair FAD-binding/transporter-associated domain-like 21
NAD(P)-binding Rossmann-fold domains TrkA C-terminal domain-like 22
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphohistidine domain 22
Ribonuclease H-like DNA/RNA polymerases 22
Lysozyme-like beta-lactamase/transpeptidase-like 22
Acyl-CoA N-acyltransferases (Nat) Acyl-CoA N-acyltransferases (Nat) 21
Glutathione synthetase ATP-binding domain-like Single hybrid motif 22
PreATP-grasp domain Single hybrid motif 22
2Fe-2S ferredoxin-like alpha-helical ferredoxin 11
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 11
Ribosomal protein S5 domain 2-like HSP90 C-terminal domain 11
Translation proteins "Winged helix" DNA-binding domain 11
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 11
YhbC-like, N-terminal domain YhbC-like, C-terminal domain 11
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 11
Nucleotidylyl transferase Riboflavin kinase-like 11
Nucleic acid-binding proteins Putative DNA-binding domain 11
L9 N-domain-like Ribosomal protein L9 C-domain 11
Metallo-hydrolase/oxidoreductase Flavoproteins 11
RmlC-like cupins Homeodomain-like 11
Tryptophan synthase beta subunit-like PLP-dependent enzymes ACT-like 11
lambda integrase-like, N-terminal domain DNA breaking-rejoining enzymes 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Adenine nucleotide alpha hydrolases-like 11
beta-lactamase/transpeptidase-like Penicillin-binding protein 2x (pbp-2x), c-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases HRDC-like 11
Nucleotide-diphospho-sugar transferases Phosphoglucomutase, first 3 domains 11
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 11
UDP-Glycosyltransferase/glycogen phosphorylase UDP-Glycosyltransferase/glycogen phosphorylase 11
Leukotriene A4 hydrolase N-terminal domain Metalloproteases ("zincins"), catalytic domain 11
all-alpha NTP pyrophosphatases all-alpha NTP pyrophosphatases 11
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 11
Fe-only hydrogenase P-loop containing nucleoside triphosphate hydrolases 11
Ribulose-phoshate binding barrel Nitrite and sulphite reductase 4Fe-4S domain-like 11
NAD(P)-binding Rossmann-fold domains Siroheme synthase middle domains-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 11
EspE N-terminal domain-like CheW-like 11
Dihydropteroate synthetase-like Cobalamin (vitamin B12)-binding domain 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
"Winged helix" DNA-binding domain Chorismate lyase-like 11
Class II aaRS and biotin synthetases GAD domain-like 11
Rho N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
YrdC/RibB Actin-like ATPase domain 11
Pectin lyase-like Pectin lyase-like 11
Periplasmic binding protein-like II ACT-like 11
Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 4Fe-4S ferredoxins 11
ACT-like Aminoacid dehydrogenase-like, N-terminal domain 11
Nucleotide-diphospho-sugar transferases Guanosine diphospho-D-mannose pyrophosphorylase/mannose-6-phosphate isomerase linker domain 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
CheW-like CheY-like 11
PreATP-grasp domain PreATP-grasp domain 11
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 11
Nucleotidylyl transferase tRNA-binding arm 11
RuvA domain 2-like RuvA domain 2-like 11
PHP domain-like AF1531-like 11
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 11
Formate/glycerate dehydrogenase catalytic domain-like ACT-like 11
N-terminal domain of MutM-like DNA repair proteins Glucocorticoid receptor-like (DNA-binding domain) 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
Nucleotidyltransferase TGS-like 11
Cupredoxins Fibronectin type III 11
Nucleic acid-binding proteins Prokaryotic type KH domain (KH-domain type II) 11
Cysteine proteinases alpha/beta-Hydrolases 11
Phage tail proteins Phage tail proteins 11
GroEL equatorial domain-like GroEL-intermediate domain like 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
P-loop containing nucleoside triphosphate hydrolases CarD-like 11
MFS general substrate transporter Acetyl-CoA synthetase-like 11
Nucleotide-diphospho-sugar transferases NAD(P)-binding Rossmann-fold domains 11
Nucleic acid-binding proteins GAD domain-like 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 11
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 11
FAD/NAD-linked reductases, dimerisation (C-terminal) domain Rhodanese/Cell cycle control phosphatase 11
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 11
L30e-like alpha/beta knot 11
Sporulation related repeat Cysteine proteinases 11
HIT-like HIT-like 11
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 11
P-loop containing nucleoside triphosphate hydrolases PGBD-like 11
Molybdenum cofactor-binding domain Molybdenum cofactor-binding domain 11
NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains 11
Voltage-gated potassium channels TrkA C-terminal domain-like 11
Nucleotidyltransferase ADP-ribosylation 11
Class II aaRS and biotin synthetases C-terminal domain of transcriptional repressors 11
Rudiment single hybrid motif Aldolase 11
Thiamin diphosphate-binding fold (THDP-binding) Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
DNA ligase/mRNA capping enzyme, catalytic domain RuvA domain 2-like 11
P-loop containing nucleoside triphosphate hydrolases TrpR-like 11
Ribosomal protein S5 domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
Nucleic acid-binding proteins ArfGap/RecO-like zinc finger 11
Acylphosphatase/BLUF domain-like Actin-like ATPase domain 11
NAD(P)-binding Rossmann-fold domains Serine metabolism enzymes domain 11
TPR-like (Trans)glycosidases 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 11
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 11
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Outer membrane efflux proteins (OEP) 11
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 11
Prokaryotic type I DNA topoisomerase Zinc beta-ribbon 11
"Winged helix" DNA-binding domain S-adenosyl-L-methionine-dependent methyltransferases 11
Tetrapyrrole methylase S-adenosyl-L-methionine-dependent methyltransferases 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Nucleotide cyclase 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Eukaryotic type KH-domain (KH-domain type I) 11
Iron-dependent repressor protein, dimerization domain C-terminal domain of transcriptional repressors 11
vWA-like Quinoprotein alcohol dehydrogenase-like 11
Fibronectin type III Type I dockerin domain 11
NTF2-like Sec-C motif 11
Trimeric LpxA-like enzymes Phosphoglucomutase, C-terminal domain 11
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 11
Tex N-terminal region-like Nucleic acid-binding proteins 11
TSP type-3 repeat OmpA-like 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
Adenine nucleotide alpha hydrolases-like PheT/TilS domain 11
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 11
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 11
Homodimeric domain of signal transducing histidine kinase HD-domain/PDEase-like 11
Nqo1C-terminal domain-like 4Fe-4S ferredoxins 11
P-loop containing nucleoside triphosphate hydrolases SMR domain-like 11
TGS-like Class II aaRS and biotin synthetases 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
Putative DNA-binding domain Anticodon-binding domain of PheRS 11
Nucleotide-diphospho-sugar transferases Phosphoglucomutase, C-terminal domain 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
EspE N-terminal domain-like Homodimeric domain of signal transducing histidine kinase 11
Nudix Nudix 11
Adenine nucleotide alpha hydrolases-like Homodimeric domain of signal transducing histidine kinase 11
Aldolase Single hybrid motif 11
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
Cupredoxins Cytochrome c 11
Transcription factor NusA, N-terminal domain Prokaryotic type KH domain (KH-domain type II) 11
NAD(P)-binding Rossmann-fold domains Glutamyl tRNA-reductase dimerization domain 11
N-terminal domain of DnaB helicase P-loop containing nucleoside triphosphate hydrolases 11
PIN domain-like DNA/RNA polymerases 11
GAF domain-like Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 11
RBP11-like subunits of RNA polymerase C-terminal domain of RNA polymerase alpha subunit 11
L,D-transpeptidase catalytic domain-like Sporulation related repeat 11
Multidrug efflux transporter AcrB transmembrane domain Outer membrane efflux proteins (OEP) 11
Diaminopimelate epimerase-like Diaminopimelate epimerase-like 11
Glutamine synthetase/guanido kinase GatB/YqeY motif 11
Aldolase post-HMGL domain-like 11
C-terminal domain of transcriptional repressors Nucleotide cyclase 11
LigT-like HAD-like 11
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 11
Serine metabolism enzymes domain ACT-like 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
Bacterial muramidases Lysozyme-like 11
MFS general substrate transporter Glycerol-3-phosphate (1)-acyltransferase 11
Rho N-terminal domain-like Nucleic acid-binding proteins 11
4Fe-4S ferredoxins FMN-dependent nitroreductase-like 11
YbaK/ProRS associated domain Class II aaRS ABD-related 11
Putative DNA-binding domain Phoshotransferase/anion transport protein 11
Metallo-dependent hydrolases Radical SAM enzymes 11
Homocysteine S-methyltransferase Dihydropteroate synthetase-like 11
RuvA domain 2-like JAB1/MPN domain 11
CheC-like Surface presentation of antigens (SPOA) 11
Trimeric LpxA-like enzymes Phosphoglucomutase, first 3 domains 11
Folate-binding domain Aminomethyltransferase beta-barrel domain 11
GroEL-intermediate domain like GroEL apical domain-like 11
Fic-like "Winged helix" DNA-binding domain 11
HydA/Nqo6-like HydB/Nqo4-like 11
HD-domain/PDEase-like TGS-like 11
cAMP-binding domain-like Nucleotide cyclase 11
MesJ substrate recognition domain-like PheT/TilS domain 11
(Trans)glycosidases Protein kinase-like (PK-like) 11
Translation proteins ThrRS/AlaRS common domain 11
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 11
DHH phosphoesterases Nucleotidyltransferase 11
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 11
Ribbon-helix-helix ACT-like 11
Class II aaRS and biotin synthetases YbaK/ProRS associated domain 11
CheY-like PP2C-like 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
4Fe-4S ferredoxins FMN-linked oxidoreductases 11
2Fe-2S ferredoxin-like CO dehydrogenase ISP C-domain like 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 11
Formate/glycerate dehydrogenase catalytic domain-like Serine metabolism enzymes domain 11
Porins Porins 11
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 11
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 11
HD-domain/PDEase-like Nucleotidyltransferase 11
Chorismate mutase II ACT-like 11
Tetrapyrrole methylase HemD-like 11
Carbamate kinase-like PUA domain-like 11
Glutamyl tRNA-reductase catalytic, N-terminal domain NAD(P)-binding Rossmann-fold domains 11
Adenine nucleotide alpha hydrolases-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Adenine nucleotide alpha hydrolases-like DHS-like NAD/FAD-binding domain 11
PurS-like PurM C-terminal domain-like 11
Respiratory nitrate reductase 1 gamma chain alpha-helical ferredoxin 11
ADC synthase D-aminoacid aminotransferase-like PLP-dependent enzymes 11
Cytochrome c oxidase subunit II-like, transmembrane region Cupredoxins 11
GIY-YIG endonuclease RuvA domain 2-like 11
4Fe-4S ferredoxins 4Fe-4S ferredoxins 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 11
FAD-binding/transporter-associated domain-like Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain 11
CBS-domain pair Nucleotide-diphospho-sugar transferases 11
Cryptochrome/photolyase, N-terminal domain Cryptochrome/photolyase FAD-binding domain 11
Nqo1C-terminal domain-like alpha-helical ferredoxin 11
Nitrite and sulphite reductase 4Fe-4S domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
Putative isomerase YbhE Fibronectin type III 11
Acylphosphatase/BLUF domain-like YrdC/RibB 11
Tex N-terminal region-like Ribonuclease H-like 11
TK C-terminal domain-like Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 11
Methylglyoxal synthase-like Cytidine deaminase-like 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
PheT/TilS domain Anticodon-binding domain of PheRS 11
Thioredoxin-like 4Fe-4S ferredoxins 11
Ribonuclease H-like Nucleic acid-binding proteins 11
Eukaryotic type KH-domain (KH-domain type I) Nucleic acid-binding proteins 11
Molybdenum cofactor biosynthesis proteins CinA-like 11
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
Homocysteine S-methyltransferase Cobalamin (vitamin B12)-binding domain 11
"Winged helix" DNA-binding domain LexA/Signal peptidase 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
PreATP-grasp domain post-HMGL domain-like 11
Cadherin-like CalX-like 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
Actin-like ATPase domain HD-domain/PDEase-like 11
Translation proteins Initiation factor IF2/eIF5b, domain 3 11
Poly A polymerase C-terminal region-like ACT-like 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Nucleic acid-binding proteins 11
DNA repair protein MutS, domain III SMR domain-like 11
SirA-like DsrEFH-like 11
Cytidine deaminase-like Nucleotide-diphospho-sugar transferases 11
Ribonuclease H-like RuvA domain 2-like 11
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 11
"Winged helix" DNA-binding domain MOP-like 11
Trigger factor ribosome-binding domain FKBP-like 11
YjeF N-terminal domain-like Ribokinase-like 11
TPR-like MetI-like 11
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 11
FMN-linked oxidoreductases Alpha subunit of glutamate synthase, C-terminal domain 11
Adenine nucleotide alpha hydrolases-like GAF domain-like 11
4Fe-4S ferredoxins Fe-only hydrogenase 11
Aldolase AFP III-like domain 11
CalX-like CalX-like 11
GspK insert domain-like RuvA domain 2-like 11
Zinc beta-ribbon Prokaryotic SH3-related domain 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Alpha subunit of glutamate synthase, C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases TGS-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
Carboxypeptidase regulatory domain-like Carboxypeptidase regulatory domain-like 11
Ferritin-like Nucleotide cyclase 11
TPR-like Cobalamin (vitamin B12)-binding domain 11
Cytochrome c Multiheme cytochromes 11
OMPA-like TSP type-3 repeat 11
HprK N-terminal domain-like CBS-domain pair 11
Aconitase B, N-terminal domain Aconitase iron-sulfur domain 11
Sec-C motif UDP-Glycosyltransferase/glycogen phosphorylase 11
Cytidine deaminase-like Dihydrofolate reductase-like 11
PreATP-grasp domain Aldolase 11
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 11
GIY-YIG endonuclease C-terminal UvrC-binding domain of UvrB 11
Nqo1 FMN-binding domain-like 4Fe-4S ferredoxins 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 11
NAD(P)-linked oxidoreductase alpha-helical ferredoxin 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
Trm112p-like S-adenosyl-L-methionine-dependent methyltransferases 11
Aconitase B, N-terminal domain LeuD/IlvD-like 11
Transmembrane di-heme cytochromes a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 11
Protease propeptides/inhibitors Subtilisin-like 11
Fibronectin type III Fibronectin type III 11
FAD-linked oxidoreductase ALDH-like 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 11
EspE N-terminal domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
4Fe-4S ferredoxins DHS-like NAD/FAD-binding domain 11
PreATP-grasp domain Methylglyoxal synthase-like 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 11
lambda repressor-like DNA-binding domains LexA/Signal peptidase 11
Radical SAM enzymes RuvA domain 2-like 11
Tetrapyrrole methylase P-loop containing nucleoside triphosphate hydrolases 11
CheW-like Methyl-accepting chemotaxis protein (MCP) signaling domain 11
Ribonuclease H-like HRDC-like 11
RuvA domain 2-like MCP/YpsA-like 11
OmpA-like OmpA-like 11
Rhodanese/Cell cycle control phosphatase P-loop containing nucleoside triphosphate hydrolases 11
PIN domain-like Ribonuclease H-like 11
HAMP domain-like HD-domain/PDEase-like 11
HprK N-terminal domain-like DHH phosphoesterases 11
PheT/TilS domain Class II aaRS and biotin synthetases 11
Ribonuclease PH domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
Adenine nucleotide alpha hydrolases-like MesJ substrate recognition domain-like 11
Nucleotide-diphospho-sugar transferases P-loop containing nucleoside triphosphate hydrolases 11
FAD/NAD(P)-binding domain Rhodanese/Cell cycle control phosphatase 11
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 11
R1 subunit of ribonucleotide reductase, N-terminal domain PFL-like glycyl radical enzymes 11
YajQ-like YajQ-like 11
4Fe-4S ferredoxins Radical SAM enzymes 11
NHL repeat Type I dockerin domain 11
Transcription factor NusA, N-terminal domain Nucleic acid-binding proteins 11
Tetrapyrrole methylase Class I glutamine amidotransferase-like 11
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
MetI-like MetI-like 11
Zinc beta-ribbon DNA primase core 11
Periplasmic binding protein-like II GlnB-like 11
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 11
DNA clamp DNA clamp 11
Calcium-dependent phosphotriesterase Type I dockerin domain 11
Aspartate/glutamate racemase Aspartate/glutamate racemase 11
EAL domain-like HD-domain/PDEase-like 11
GAF domain-like Methyl-accepting chemotaxis protein (MCP) signaling domain 11
Homocysteine S-methyltransferase FAD-linked oxidoreductase 11
Triger factor/SurA peptide-binding domain-like Triger factor/SurA peptide-binding domain-like 11
GAF domain-like PP2C-like 11
Pectin lyase-like Invasin/intimin cell-adhesion fragments 11
5' to 3' exonuclease, C-terminal subdomain DNA/RNA polymerases 11
HAMP domain-like EAL domain-like 11
DsbC/DsbG N-terminal domain-like Thioredoxin-like 11
PPK N-terminal domain-like Phospholipase D/nuclease 11
Nucleotidyltransferase Nucleotidyltransferase 11
Homo-oligomeric flavin-containing Cys decarboxylases, HFCD CoaB-like 11
HprK N-terminal domain-like PEP carboxykinase-like 11
Glutathione synthetase ATP-binding domain-like Aldolase 11
Enolase N-terminal domain-like Enolase C-terminal domain-like 11
"Winged helix" DNA-binding domain C-terminal domain of transcriptional repressors 11
Thiamin phosphate synthase Ribokinase-like 11
PK beta-barrel domain-like PK C-terminal domain-like 11
Sensory domain-like Sensory domain-like 11
Rhodanese/Cell cycle control phosphatase YceI-like 11
E set domains Carboxypeptidase regulatory domain-like 11
Integrin alpha N-terminal domain alpha-D-mannose-specific plant lectins 11
Homodimeric domain of signal transducing histidine kinase Nucleotide cyclase 11
Dihydropteroate synthetase-like Methionine synthase domain 11
PurS-like PurS-like 11
PDZ domain-like Radical SAM enzymes 11
ClpP/crotonase ClpP/crotonase 11
Fibronectin type III Multiheme cytochromes 11
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 11
CbiG N-terminal domain-like CobE/GbiG C-terminal domain-like 11
Eukaryotic type KH-domain (KH-domain type I) HD-domain/PDEase-like 11
RCC1/BLIP-II RCC1/BLIP-II 11
Glutathione synthetase ATP-binding domain-like Succinyl-CoA synthetase domains 11
TolB, N-terminal domain Tricorn protease N-terminal domain 11
Formyltransferase FMT C-terminal domain-like 11
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase HD-domain/PDEase-like 11
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 11
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 11
GAF domain-like Phosphohistidine domain 11
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 11
HMA, heavy metal-associated domain HAD-like 11
RCC1/BLIP-II Oligoxyloglucan reducing end-specific cellobiohydrolase 11
Glutamyl tRNA-reductase catalytic, N-terminal domain Glutamyl tRNA-reductase dimerization domain 11
Riboflavin synthase domain-like Riboflavin synthase domain-like 11
PHP domain-like Protein kinase-like (PK-like) 11
Cytochrome c oxidase subunit II-like, transmembrane region Cytochrome c 11
"Winged helix" DNA-binding domain PLP-dependent transferases 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
Protein kinase-like (PK-like) P-loop containing nucleoside triphosphate hydrolases 11
TPR-like Carbohydrate-binding domain 11
NagB/RpiA/CoA transferase-like 4Fe-4S ferredoxins 11
Translation proteins Translation proteins 11
beta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like 11
GAF domain-like Phosphoenolpyruvate/pyruvate domain 11
Hsp33 domain HSP33 redox switch-like 11
4Fe-4S ferredoxins Homeodomain-like 11
ACP-like Glycerol-3-phosphate (1)-acyltransferase 11
TGS-like Class II aaRS ABD-related 11
Voltage-gated potassium channels NAD(P)-binding Rossmann-fold domains 11
S13-like H2TH domain Glucocorticoid receptor-like (DNA-binding domain) 11
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 11
CBS-domain pair Poly A polymerase C-terminal region-like 11
PYP-like sensor domain (PAS domain) PP2C-like 11
4Fe-4S ferredoxins P-loop containing nucleoside triphosphate hydrolases 11
P-loop containing nucleoside triphosphate hydrolases C-terminal UvrC-binding domain of UvrB 11
HRDC-like HRDC-like 11
P-loop containing nucleoside triphosphate hydrolases Smc hinge domain 11
post-HMGL domain-like Single hybrid motif 11
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
"Winged helix" DNA-binding domain Class II aaRS and biotin synthetases 11
GAF domain-like P-loop containing nucleoside triphosphate hydrolases 11
Nucleotide-diphospho-sugar transferases TPR-like 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FMN-linked oxidoreductases 11
ClpP/crotonase NfeD domain-like 11
Flavoproteins 4Fe-4S ferredoxins 11
Chorismate mutase II Periplasmic binding protein-like II 11
RuvA domain 2-like BRCT domain 11
4Fe-4S ferredoxins HydA/Nqo6-like 11
HydA/Nqo6-like Nqo5-like 11
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Outer membrane efflux proteins (OEP) 11
YrdC/RibB RibA-like 11
Fibronectin type III Pectin lyase-like 11
Fibronectin type III Invasin/intimin cell-adhesion fragments 11
DHH phosphoesterases Poly A polymerase C-terminal region-like 11
PIN domain-like P-loop containing nucleoside triphosphate hydrolases 11
ARM repeat ARM repeat 11
Nucleotidylyl transferase Ribosomal protein L25-like 11
Acetyl-CoA synthetase-like ACP-like 11
Prokaryotic type KH domain (KH-domain type II) Prokaryotic type KH domain (KH-domain type II) 11
Quinoprotein alcohol dehydrogenase-like Quinoprotein alcohol dehydrogenase-like 11
CarD-like TRCF domain-like 11
Nucleotide-diphospho-sugar transferases UDP-Glycosyltransferase/glycogen phosphorylase 11
PHP14-like Phospholipase D/nuclease 11
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 11
Metallo-hydrolase/oxidoreductase Rhodanese/Cell cycle control phosphatase 11
NAD(P)-binding Rossmann-fold domains Isocitrate/Isopropylmalate dehydrogenase-like 11
Cadherin-like EF-hand 11
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain "Winged helix" DNA-binding domain 11
Ribokinase-like Nucleotidylyl transferase 11
PPK N-terminal domain-like PHP14-like 11
CBS-domain pair Nucleotidyltransferase 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
Alpha-L RNA-binding motif S-adenosyl-L-methionine-dependent methyltransferases 11
Rudiment single hybrid motif post-HMGL domain-like 11
RNase III domain-like dsRNA-binding domain-like 11
Methionine synthase domain Cobalamin (vitamin B12)-binding domain 11
Zinc beta-ribbon Zinc beta-ribbon 11
Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases 11
alpha-helical ferredoxin Rhodanese/Cell cycle control phosphatase 11
E set domains (Trans)glycosidases 11
Aminopeptidase/glucanase lid domain Zn-dependent exopeptidases 11
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 11
C-terminal UvrC-binding domain of UvrB RuvA domain 2-like 11
Molybdenum cofactor biosynthesis proteins MoeA C-terminal domain-like 11
4Fe-4S ferredoxins Adenine nucleotide alpha hydrolases-like 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
UbiD C-terminal domain-like UbiD C-terminal domain-like 11
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 11
Subtilisin-like Galactose-binding domain-like 11
Tex N-terminal region-like RuvA domain 2-like 11
MoeA N-terminal region -like Molybdenum cofactor biosynthesis proteins 11
Nqo1 middle domain-like 4Fe-4S ferredoxins 11
SufE/NifU Fe-S cluster assembly (FSCA) domain-like 11
MOP-like MOP-like 11
GroEL equatorial domain-like GroEL apical domain-like 11
Galactose oxidase, central domain Fibronectin type III 11
2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain Alkaline phosphatase-like 11
Sec-C motif TPR-like 11
PUA domain-like alpha/beta knot 11
Lysozyme-like LysM domain 11
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 11
Nucleotidyltransferase substrate binding subunit/domain Nucleotidyltransferase substrate binding subunit/domain 11
FliG FliG 11
Macro domain-like Zn-dependent exopeptidases 11
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 11
Aminoacid dehydrogenase-like, N-terminal domain Isocitrate/Isopropylmalate dehydrogenase-like 11
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 11
CBS-domain pair CBS-domain pair 11
PheT/TilS domain Putative DNA-binding domain 11
Nucleic acid-binding proteins PheT/TilS domain 11
TGS-like ThrRS/AlaRS common domain 11
Nitrite/Sulfite reductase N-terminal domain-like Nitrite/Sulfite reductase N-terminal domain-like 11
Homocysteine S-methyltransferase Methionine synthase domain 11
Class II aaRS and biotin synthetases Translation proteins 11
CRISPR-associated protein CRISPR-associated protein 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
Translation proteins PRC-barrel domain 11
Thioredoxin-like Six-hairpin glycosidases 11
Oligoxyloglucan reducing end-specific cellobiohydrolase Oligoxyloglucan reducing end-specific cellobiohydrolase 11
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 11
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 11
Penicillin binding protein dimerisation domain Penicillin-binding protein 2x (pbp-2x), c-terminal domain 11
Carbamate kinase-like ACT-like 11
Sensory domain-like PYP-like sensor domain (PAS domain) 11
Clc chloride channel CBS-domain pair 11
TPR-like L,D-transpeptidase catalytic domain-like 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain ACT-like 11
FAD/NAD(P)-binding domain 4Fe-4S ferredoxins 11
TPR-like S-adenosyl-L-methionine-dependent methyltransferases 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
LysM domain Cysteine proteinases 11
5' to 3' exonuclease, C-terminal subdomain Ribonuclease H-like 11
HMA, heavy metal-associated domain HMA, heavy metal-associated domain 11
EspE N-terminal domain-like CheC-like 11
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 11
Glutathione synthetase ATP-binding domain-like post-HMGL domain-like 11
Nucleic acid-binding proteins BRCT domain 11
Nucleic acid-binding proteins DNA helicase RuvA subunit, C-terminal domain 11
TGS-like ACT-like 11
Phage tail proteins Phage fibre proteins 11
Nqo1C-terminal domain-like Nucleotide-binding domain 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase HSP90 C-terminal domain 11
Nucleotidyltransferase substrate binding subunit/domain ACT-like 11
PEP carboxykinase N-terminal domain PEP carboxykinase-like 11
Methylated DNA-protein cysteine methyltransferase domain Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
Histidine-containing phosphotransfer domain, HPT domain EspE N-terminal domain-like 11
RuvA domain 2-like DNA helicase RuvA subunit, C-terminal domain 11
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 11
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 11
Nucleic acid-binding proteins Anticodon-binding domain of PheRS 11
HD-domain/PDEase-like ACT-like 11
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 11
MoeA N-terminal region -like MoeA C-terminal domain-like 11
Glycosyl hydrolase domain Protein kinase-like (PK-like) 11
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 11
CheC-like CheY-like 11
(Trans)glycosidases Glycosyl hydrolase domain 11
PurS-like PurM N-terminal domain-like 11
Phage tail proteins gp5 N-terminal domain-like 11
Fe-only hydrogenase Homeodomain-like 11
YlxR-like L30e-like 11
"Helical backbone" metal receptor "Helical backbone" metal receptor 11
Ribosomal protein L6 Ribosomal protein L6 11
Putative isomerase YbhE Galactose oxidase, central domain 11
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 11
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 11
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 11
Nucleotidyltransferase substrate binding subunit/domain Poly A polymerase C-terminal region-like 11

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