SUPERFAMILY 1.75 HMM library and genome assignments server

Domain combination pairs in Manihot esculenta v147

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

  • For a list of unique full length architectures for this genome click here (can be slow).
Adjacent domain pairs graph

Graph of adjacent domain pairs.


Add or remove domain pairs

The links below permit the addition or removal of specific sets of domain combination pairs.


Jump to [ Top of page · Add/remove domain pairs · Domain combination pairs ]

Add or remove genomes

Change the list of genome two-letter codes in the 'Include genomes' box to include domain-pairs from those genomes.
Change the list of genomes in the 'Exclude genomes' box to exclude domain-pairs from those genomes.
List of all two-letter genome codes.

Add or remove genomes:
Include genomes:
Exclude genomes:


Jump to [ Top of page · Add/remove domain pairs · Add/remove genomes ]

Domain combination pairs

1354 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
L domain-like Protein kinase-like (PK-like) 24832
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 19249
P-loop containing nucleoside triphosphate hydrolases L domain-like 18344
L domain-like L domain-like 18266
RNA-binding domain, RBD RNA-binding domain, RBD 14919
RNI-like L domain-like 11656
TPR-like TPR-like 8927
alpha-D-mannose-specific plant lectins Protein kinase-like (PK-like) 888
NAD(P)-binding Rossmann-fold domains GroES-like 767
RING/U-box ARM repeat 7010
Thioredoxin-like GST C-terminal domain-like 706
F-box domain RNI-like 6913
Actin-like ATPase domain Actin-like ATPase domain 6717
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 6415
ARM repeat ARM repeat 6431
HAD-like Calcium ATPase, transmembrane domain M 6214
Cupredoxins Cupredoxins 585
Calcium ATPase, transduction domain A HAD-like 5710
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 5110
RNI-like Protein kinase-like (PK-like) 5119
RNI-like RNI-like 5026
Cyclin-like Cyclin-like 496
Thiolase-like Thiolase-like 492
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 475
Plant invertase/pectin methylesterase inhibitor Pectin lyase-like 462
Barwin-like endoglucanases PHL pollen allergen 451
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 457
S-adenosyl-L-methionine-dependent methyltransferases S-adenosyl-L-methionine-dependent methyltransferases 434
Metal cation-transporting ATPase, ATP-binding domain N Calcium ATPase, transmembrane domain M 4311
Concanavalin A-like lectins/glucanases Protein kinase-like (PK-like) 435
Protein kinase-like (PK-like) EF-hand 422
CRAL/TRIO N-terminal domain CRAL/TRIO domain 428
Calcium ATPase, transduction domain A Metal cation-transporting ATPase, ATP-binding domain N 419
(Trans)glycosidases Galactose-binding domain-like 409
Metal cation-transporting ATPase, ATP-binding domain N HAD-like 388
(Trans)glycosidases Glycosyl hydrolase domain 378
ABC transporter transmembrane region ABC transporter transmembrane region 366
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 369
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 367
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 355
P-loop containing nucleoside triphosphate hydrolases Translation proteins 3512
Voltage-gated potassium channels cAMP-binding domain-like 357
RING/U-box RING/U-box 3517
C2 domain (Calcium/lipid-binding domain, CaLB) C2 domain (Calcium/lipid-binding domain, CaLB) 348
"Winged helix" DNA-binding domain S-adenosyl-L-methionine-dependent methyltransferases 342
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 349
CCCH zinc finger CCCH zinc finger 3320
Terpenoid cyclases/Protein prenyltransferases Terpenoid synthases 333
Eukaryotic type KH-domain (KH-domain type I) Eukaryotic type KH-domain (KH-domain type I) 3313
beta-beta-alpha zinc fingers beta-beta-alpha zinc fingers 3212
Toll/Interleukin receptor TIR domain P-loop containing nucleoside triphosphate hydrolases 3112
P-loop containing nucleoside triphosphate hydrolases RNI-like 3117
Homeodomain-like Homeodomain-like 3111
DNA-binding pseudobarrel domain DNA-binding pseudobarrel domain 316
ENTH/VHS domain GAT-like domain 305
Toll/Interleukin receptor TIR domain L domain-like 3011
F-box domain Kelch motif 304
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 294
Nucleotidyltransferase PAP/OAS1 substrate-binding domain 296
DNA-binding pseudobarrel domain CAD & PB1 domains 293
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 2814
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 289
ACT-like ACT-like 2810
Ubiquitin-like Ubiquitin-like 257
DNA-binding domain DNA-binding domain 253
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 258
Galactose-binding domain-like Galactose-binding domain-like 254
Protein kinase-like (PK-like) Protein kinase-like (PK-like) 247
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 249
WD40 repeat-like WD40 repeat-like 2411
Thioredoxin-like Thioredoxin-like 2412
Ypt/Rab-GAP domain of gyp1p Ypt/Rab-GAP domain of gyp1p 243
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 224
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 227
GroEL-intermediate domain like GroEL apical domain-like 224
Phospholipase D/nuclease Phospholipase D/nuclease 228
GroEL equatorial domain-like GroEL apical domain-like 224
Chaperone J-domain HSP40/DnaJ peptide-binding domain 226
Glucocorticoid receptor-like (DNA-binding domain) AN1-like Zinc finger 211
Purple acid phosphatase, N-terminal domain Metallo-dependent phosphatases 213
GroEL equatorial domain-like GroEL-intermediate domain like 213
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 203
Homeodomain-like Bet v1-like 205
CheY-like Homeodomain-like 203
Lipase/lipooxygenase domain (PLAT/LH2 domain) Lipoxigenase 202
CCCH zinc finger RNA-binding domain, RBD 205
F-box domain Galactose oxidase, central domain 203
FYVE/PHD zinc finger FYVE/PHD zinc finger 2010
"Winged helix" DNA-binding domain L domain-like 208
NTF2-like RNA-binding domain, RBD 203
Homodimeric domain of signal transducing histidine kinase CheY-like 197
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 197
Thioesterase/thiol ester dehydrase-isomerase Thioesterase/thiol ester dehydrase-isomerase 193
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 196
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 199
RING/U-box Nucleotide-diphospho-sugar transferases 193
Subtilisin-like PA domain 183
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 185
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheY-like 186
Bet v1-like Bet v1-like 187
WRKY DNA-binding domain WRKY DNA-binding domain 182
SNARE-like SNARE fusion complex 183
Terpenoid cyclases/Protein prenyltransferases Terpenoid cyclases/Protein prenyltransferases 184
GroES-like GroES-like 184
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 182
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 176
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 171
Toll/Interleukin receptor TIR domain "Winged helix" DNA-binding domain 175
Nucleic acid-binding proteins Nucleic acid-binding proteins 1714
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 173
Adenine nucleotide alpha hydrolases-like Protein kinase-like (PK-like) 173
UBA-like Ubiquitin-like 1710
Periplasmic binding protein-like I Periplasmic binding protein-like II 174
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 174
(Trans)glycosidases Beta-D-glucan exohydrolase, C-terminal domain 173
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 173
PK beta-barrel domain-like PK C-terminal domain-like 162
F1F0 ATP synthase subunit C F1F0 ATP synthase subunit C 161
CBS-domain pair CBS-domain pair 166
Ran binding protein zinc finger-like Ran binding protein zinc finger-like 168
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 167
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 156
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 156
Translation proteins EF-G C-terminal domain-like 156
UDP-Glycosyltransferase/glycogen phosphorylase HAD-like 152
PGBD-like Metalloproteases ("zincins"), catalytic domain 152
EF-hand EF-hand 155
C2 domain (Calcium/lipid-binding domain, CaLB) Phospholipase D/nuclease 155
Retrovirus zinc finger-like domains RNA-binding domain, RBD 155
PAP/OAS1 substrate-binding domain PAP/Archaeal CCA-adding enzyme, C-terminal domain 143
ARM repeat Protein kinase-like (PK-like) 1413
PAZ domain Ribonuclease H-like 143
GAF domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 145
RING/U-box Ankyrin repeat 143
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 144
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 143
PH domain-like FYVE/PHD zinc finger 142
Glucocorticoid receptor-like (DNA-binding domain) Glucocorticoid receptor-like (DNA-binding domain) 144
SNARE-like Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor 142
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 145
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 143
EF-G C-terminal domain-like EF-G C-terminal domain-like 145
Nucleotidyltransferase PAP/Archaeal CCA-adding enzyme, C-terminal domain 143
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 143
GAF domain-like Homodimeric domain of signal transducing histidine kinase 135
FAS1 domain FAS1 domain 134
Trypsin-like serine proteases PDZ domain-like 135
Single hybrid motif CoA-dependent acyltransferases 136
MFS general substrate transporter MFS general substrate transporter 132
Zn-finger domain of Sec23/24 vWA-like 137
beta-sandwich domain of Sec23/24 Zn-finger domain of Sec23/24 137
Retrovirus zinc finger-like domains Retrovirus zinc finger-like domains 137
beta-sandwich domain of Sec23/24 vWA-like 137
F-box domain Tubby C-terminal domain-like 134
Actin depolymerizing proteins Actin depolymerizing proteins 134
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 1310
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 124
vWA-like Helical domain of Sec23/24 126
beta-sandwich domain of Sec23/24 Helical domain of Sec23/24 126
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 124
Ribosomal protein S5 domain 2-like HSP90 C-terminal domain 123
Acid proteases Saposin 123
E set domains (Trans)glycosidases 125
WD40 repeat-like Quinoprotein alcohol dehydrogenase-like 127
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase HSP90 C-terminal domain 123
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 124
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 124
Protein kinase-like (PK-like) TPR-like 123
Cullin homology domain "Winged helix" DNA-binding domain 124
POZ domain TRAF domain-like 123
RING/U-box Protein kinase-like (PK-like) 124
HMA, heavy metal-associated domain HMA, heavy metal-associated domain 124
dsRNA-binding domain-like dsRNA-binding domain-like 126
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein S5 domain 2-like 127
alpha-D-mannose-specific plant lectins alpha-D-mannose-specific plant lectins 124
Zn-finger domain of Sec23/24 Helical domain of Sec23/24 126
Voltage-gated potassium channels Voltage-gated potassium channels 114
Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain SAICAR synthase-like 117
Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 115
RING/U-box WD40 repeat-like 117
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 113
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 115
TPR-like HCP-like 118
ARM repeat Clathrin adaptor appendage domain 114
RING/U-box TRAF domain-like 114
(Trans)glycosidases Galactose mutarotase-like 114
Protein kinase-like (PK-like) Ankyrin repeat 113
RCC1/BLIP-II FYVE/PHD zinc finger 111
PH domain-like RCC1/BLIP-II 111
Ubiquitin-like Zn-binding ribosomal proteins 101
FYVE/PHD zinc finger Acyl-CoA N-acyltransferases (Nat) 104
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 107
Zn-finger domain of Sec23/24 C-terminal, gelsolin-like domain of Sec23/24 104
"Winged helix" DNA-binding domain RNA-binding domain, RBD 103
Actin depolymerizing proteins VHP, Villin headpiece domain 101
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 104
Nucleic acid-binding proteins Translation proteins SH3-like domain 104
Voltage-gated potassium channels Ankyrin repeat 103
cAMP-binding domain-like Ankyrin repeat 103
Cryptochrome/photolyase, N-terminal domain Cryptochrome/photolyase FAD-binding domain 103
Starch-binding domain-like Galactose-binding domain-like 102
Arabinanase/levansucrase/invertase Concanavalin A-like lectins/glucanases 102
Cullin repeat-like "Winged helix" DNA-binding domain 102
UBA-like UBA-like 106
ARM repeat Hect, E3 ligase catalytic domain 104
Cullin repeat-like Cullin homology domain 102
YhbY-like YhbY-like 105
P-loop containing nucleoside triphosphate hydrolases Ankyrin repeat 103
TPR-like Thioredoxin-like 106
Galactose mutarotase-like Galactose-binding domain-like 102
beta-sandwich domain of Sec23/24 C-terminal, gelsolin-like domain of Sec23/24 104
Zinc hairpin stack RING/U-box 105
Cdc48 domain 2-like P-loop containing nucleoside triphosphate hydrolases 103
Helical domain of Sec23/24 C-terminal, gelsolin-like domain of Sec23/24 104
CHY zinc finger-like RING/U-box 105
E set domains Glycosyl hydrolase domain 103
vWA-like C-terminal, gelsolin-like domain of Sec23/24 104
Amine oxidase N-terminal region Amine oxidase N-terminal region 102
Amine oxidase N-terminal region Amine oxidase catalytic domain 102
Protease propeptides/inhibitors Subtilisin-like 103
PUA domain-like SET domain 93
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 92
UBA-like XPC-binding domain 95
WD40 repeat-like ARM repeat 97
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 91
ADC-like Cdc48 domain 2-like 92
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 94
Clc chloride channel CBS-domain pair 94
Galactose mutarotase-like Starch-binding domain-like 91
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 93
ADC-like P-loop containing nucleoside triphosphate hydrolases 92
Thioredoxin-like Cysteine-rich domain 93
RCC1/BLIP-II RCC1/BLIP-II 94
P-loop containing nucleoside triphosphate hydrolases RING/U-box 95
Sec7 domain ARM repeat 94
FYVE/PHD zinc finger RING/U-box 96
CHY zinc finger-like Zinc hairpin stack 94
t-snare proteins SNARE fusion complex 92
ENT-like Tudor/PWWP/MBT 92
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 93
POZ domain Skp1 dimerisation domain-like 92
Class II aaRS and biotin synthetases Class II aaRS ABD-related 96
EF-hand Ferredoxin reductase-like, C-terminal NADP-linked domain 93
EF-hand Riboflavin synthase domain-like 93
Translation proteins Ribosomal protein S5 domain 2-like 94
EF-G C-terminal domain-like Ribosomal protein S5 domain 2-like 94
ARM repeat Subdomain of clathrin and coatomer appendage domain 84
GAF domain-like CheY-like 83
Homeodomain-like "Winged helix" DNA-binding domain 81
P-loop containing nucleoside triphosphate hydrolases EF-hand 84
CAD & PB1 domains Protein kinase-like (PK-like) 81
Enolase N-terminal domain-like Enolase C-terminal domain-like 83
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 84
ISP domain Bet v1-like 85
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 81
PYP-like sensor domain (PAS domain) PYP-like sensor domain (PAS domain) 84
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 86
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 85
PAH2 domain PAH2 domain 82
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 82
EF-hand PLC-like phosphodiesterases 81
Ubiquitin-like XPC-binding domain 84
Ankyrin repeat Ankyrin repeat 82
PLC-like phosphodiesterases C2 domain (Calcium/lipid-binding domain, CaLB) 81
Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase C-terminal domain-like 85
EF-hand C2 domain (Calcium/lipid-binding domain, CaLB) 81
Galactose oxidase, central domain E set domains 82
RING/U-box Cysteine proteinases 84
Chromo domain-like Chromo domain-like 84
DNA-binding domain DNA-binding pseudobarrel domain 74
P-loop containing nucleoside triphosphate hydrolases ARM repeat 75
RING/U-box RNA-binding domain, RBD 72
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 73
Glycoside hydrolase/deacetylase Families 57/38 glycoside transferase middle domain 73
"Winged helix" DNA-binding domain E2F-DP heterodimerization region 72
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 73
Leukotriene A4 hydrolase N-terminal domain Metalloproteases ("zincins"), catalytic domain 73
NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains 74
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 74
(Phosphotyrosine protein) phosphatases II C2 domain (Calcium/lipid-binding domain, CaLB) 74
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 75
Clathrin adaptor appendage domain Subdomain of clathrin and coatomer appendage domain 73
HD-domain/PDEase-like Nucleotidyltransferase 74
Single hybrid motif Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 73
Families 57/38 glycoside transferase middle domain Galactose mutarotase-like 73
Glycoside hydrolase/deacetylase Galactose mutarotase-like 73
POZ domain Ankyrin repeat 74
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 75
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 73
WD40 repeat-like C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase 71
Chromo domain-like P-loop containing nucleoside triphosphate hydrolases 73
UDP-Glycosyltransferase/glycogen phosphorylase UDP-Glycosyltransferase/glycogen phosphorylase 72
Calponin-homology domain, CH-domain P-loop containing nucleoside triphosphate hydrolases 71
ARM repeat TPR-like 73
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex CoA-dependent acyltransferases 73
P-loop containing nucleoside triphosphate hydrolases E set domains 72
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 74
TRAF domain-like TRAF domain-like 63
RING/U-box TPR-like 64
Plant lectins/antimicrobial peptides Lysozyme-like 61
Cysteine proteinases Granulin repeat 62
FYVE/PHD zinc finger SET domain 65
FKBP-like TPR-like 62
HCP-like HCP-like 65
CCCH zinc finger RING/U-box 63
ThrRS/AlaRS common domain Class II aaRS and biotin synthetases 64
C2 domain (Calcium/lipid-binding domain, CaLB) Formin homology 2 domain (FH2 domain) 62
Outer arm dynein light chain 1 RNI-like 64
UROD/MetE-like UROD/MetE-like 62
Eukaryotic RPB5 N-terminal domain RPB5-like RNA polymerase subunit 61
RNase III domain-like RNase III domain-like 65
DPP6 N-terminal domain-like alpha/beta-Hydrolases 62
Galactose mutarotase-like Glycosyl hydrolase domain 61
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 62
6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 64
EF-hand Voltage-gated potassium channels 63
YrdC/RibB RibA-like 63
Ubiquitin-like Hect, E3 ligase catalytic domain 63
NAD-binding domain of HMG-CoA reductase Substrate-binding domain of HMG-CoA reductase 61
E set domains Ankyrin repeat 61
UBA-like Hect, E3 ligase catalytic domain 62
P-loop containing nucleoside triphosphate hydrolases TGS-like 63
Retrovirus zinc finger-like domains Acid proteases 63
N-terminal, heterodimerisation domain of RBP7 (RpoE) Nucleic acid-binding proteins 61
Class I glutamine amidotransferase-like Class I glutamine amidotransferase-like 61
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 64
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 64
POZ domain TAZ domain 63
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 64
PreATP-grasp domain Rudiment single hybrid motif 64
SWIB/MDM2 domain Plus3-like 65
BAR/IMD domain-like SH3-domain 61
GroEL apical domain-like SAICAR synthase-like 63
Thioredoxin-like Ubiquitin-like 62
Transducin (alpha subunit), insertion domain P-loop containing nucleoside triphosphate hydrolases 62
SET domain RuBisCo LSMT C-terminal, substrate-binding domain 62
Retrovirus zinc finger-like domains RING/U-box 61
GST C-terminal domain-like eEF-1beta-like 62
Translation initiation factor 2 beta, aIF2beta, N-terminal domain Zinc-binding domain of translation initiation factor 2 beta 62
ARM repeat UBA-like 62
HMA, heavy metal-associated domain HAD-like 64
ARM repeat POZ domain 63
Ubiquitin-like BAG domain 63
SMAD/FHA domain P-loop containing nucleoside triphosphate hydrolases 61
Creatinase/aminopeptidase "Winged helix" DNA-binding domain 62
RNA-binding domain, RBD PABC (PABP) domain 62
Ubiquitin-like Protein kinase-like (PK-like) 63
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 62
Glutathione synthetase ATP-binding domain-like Succinyl-CoA synthetase domains 62
TRAF domain-like Cysteine proteinases 62
FYVE/PHD zinc finger P-loop containing nucleoside triphosphate hydrolases 65
E set domains CBS-domain pair 51
P-loop containing nucleoside triphosphate hydrolases dsRNA-binding domain-like 53
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 52
NagB/RpiA/CoA transferase-like D-ribose-5-phosphate isomerase (RpiA), lid domain 51
Aldolase NAD(P)-binding Rossmann-fold domains 52
Nucleic acid-binding proteins Retrovirus zinc finger-like domains 53
EF-hand Mitochondrial carrier 52
PH domain-like P-loop containing nucleoside triphosphate hydrolases 52
CRAL/TRIO domain Supernatant protein factor (SPF), C-terminal domain 53
2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain Alkaline phosphatase-like 51
PLC-like phosphodiesterases PLC-like phosphodiesterases 52
PLP-binding barrel Alanine racemase C-terminal domain-like 52
FMN-linked oxidoreductases Alpha subunit of glutamate synthase, C-terminal domain 54
Protein kinase-like (PK-like) WD40 repeat-like 54
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 53
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 53
Aminopeptidase/glucanase lid domain Zn-dependent exopeptidases 51
Rhodanese/Cell cycle control phosphatase Rhodanese/Cell cycle control phosphatase 51
Concanavalin A-like lectins/glucanases P-domain of calnexin/calreticulin 52
Composite domain of metallo-dependent hydrolases Metallo-dependent hydrolases 54
RING/U-box vWA-like 53
RING/U-box Homeodomain-like 52
Thioredoxin-like eEF1-gamma domain 51
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FMN-linked oxidoreductases 54
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 51
Flavoproteins Riboflavin synthase domain-like 52
CheY-like CheY-like 52
FKBP-like FKBP-like 52
(Trans)glycosidases Chitinase insertion domain 52
Kelch motif Metallo-dependent phosphatases 52
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 53
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 51
HIT/MYND zinc finger-like Cysteine proteinases 52
Initiation factor IF2/eIF5b, domain 3 Translation proteins 52
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 53
BRCT domain BRCT domain 54
CRAL/TRIO N-terminal domain Supernatant protein factor (SPF), C-terminal domain 53
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 54
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 51
Homeodomain-like FAD-linked reductases, C-terminal domain 53
LysM domain Protein kinase-like (PK-like) 52
Carbamate kinase-like ACT-like 53
Peptidase/esterase 'gauge' domain alpha/beta-Hydrolases 52
GST C-terminal domain-like eEF1-gamma domain 51
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 52
Galactose-binding domain-like NAD(P)-binding Rossmann-fold domains 51
Ubiquitin-like Cysteine proteinases 52
P-loop containing nucleoside triphosphate hydrolases RNase III domain-like 55
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 51
Elongation factor TFIIS domain 2 Zinc beta-ribbon 52
Homeodomain-like FAD/NAD(P)-binding domain 53
DUSP-like Cysteine proteinases 54
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Alpha subunit of glutamate synthase, C-terminal domain 54
NAD(P)-binding Rossmann-fold domains ACT-like 53
Periplasmic binding protein-like II ACT-like 51
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 53
Ribonuclease H-like DNA/RNA polymerases 53
TPR-like Chaperone J-domain 54
P-loop containing nucleoside triphosphate hydrolases Smc hinge domain 54
NAD(P)-binding Rossmann-fold domains UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 41
Acyl-CoA dehydrogenase C-terminal domain-like Acyl-CoA dehydrogenase C-terminal domain-like 42
HAD-like NTF2-like 41
Translation proteins Translation proteins 41
PH domain-like Oxysterol-binding protein-like 42
PYP-like sensor domain (PAS domain) F-box domain 41
FYVE/PHD zinc finger Ankyrin repeat 41
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 42
Alpha subunit of glutamate synthase, C-terminal domain alpha-helical ferredoxin 43
RING/U-box UBA-like 42
ArfGap/RecO-like zinc finger C2 domain (Calcium/lipid-binding domain, CaLB) 42
WWE domain ADP-ribosylation 42
Ubiquitin-like PUG domain-like 43
PDZ domain-like PDZ domain-like 42
ARID-like HMG-box 42
RNA-binding domain, RBD DPP6 N-terminal domain-like 42
UBC-like Endosomal sorting complex assembly domain 41
Dimeric alpha+beta barrel Dimeric alpha+beta barrel 41
Glutathione synthetase ATP-binding domain-like Single hybrid motif 42
Flavoproteins Ferredoxin reductase-like, C-terminal NADP-linked domain 41
PUA domain-like Nucleotidylyl transferase 42
LysM domain LysM domain 42
Cysteine proteinases UBA-like 42
RNA-binding domain, RBD WW domain 43
Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 Elongation factor TFIIS domain 2 41
PH domain-like ArfGap/RecO-like zinc finger 44
Chaperone J-domain 4Fe-4S ferredoxins 43
Aconitase iron-sulfur domain LeuD/IlvD-like 42
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 43
EF-hand Calponin-homology domain, CH-domain 43
PEP carboxykinase N-terminal domain PEP carboxykinase-like 42
PYP-like sensor domain (PAS domain) Galactose oxidase, central domain 41
2Fe-2S ferredoxin-like FAD-binding/transporter-associated domain-like 42
HAD-like Glycerol-3-phosphate (1)-acyltransferase 41
ACT-like Protein kinase-like (PK-like) 41
BEACH domain WD40 repeat-like 43
P-loop containing nucleoside triphosphate hydrolases PRTase-like 41
Protein kinase-like (PK-like) UBA-like 42
Nucleotidylyl transferase Ribosomal protein L25-like 42
CCCH zinc finger Eukaryotic type KH-domain (KH-domain type I) 42
Activating enzymes of the ubiquitin-like proteins Activating enzymes of the ubiquitin-like proteins 41
PYP-like sensor domain (PAS domain) Protein kinase-like (PK-like) 42
NAD(P)-binding Rossmann-fold domains Serine metabolism enzymes domain 42
WGR domain-like ADP-ribosylation 43
FF domain FF domain 43
PH domain-like GTPase activation domain, GAP 41
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 43
FYVE/PHD zinc finger SAICAR synthase-like 41
WGR domain-like Domain of poly(ADP-ribose) polymerase 43
N-terminal nucleophile aminohydrolases (Ntn hydrolases) alpha-helical ferredoxin 43
Amidase signature (AS) enzymes TPR-like 41
DEK C-terminal domain SWIB/MDM2 domain 42
TPR-like "Winged helix" DNA-binding domain 41
P-loop containing nucleoside triphosphate hydrolases D-aminoacid aminotransferase-like PLP-dependent enzymes 41
ClpP/crotonase ClpP/crotonase 42
ARM repeat C2 domain (Calcium/lipid-binding domain, CaLB) 44
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 43
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 43
ISP transmembrane anchor ISP domain 42
Transcription factor IIA (TFIIA), alpha-helical domain Transcription factor IIA (TFIIA), beta-barrel domain 42
Ribosomal protein L6 Ribosomal protein L6 42
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 43
TPR-like CAD & PB1 domains 43
FYVE/PHD zinc finger Plus3-like 43
Rudiment single hybrid motif Single hybrid motif 42
SBT domain Ankyrin repeat 42
6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 41
Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 Zinc beta-ribbon 41
Nucleic acid-binding proteins Eukaryotic type KH-domain (KH-domain type I) 43
Serine metabolism enzymes domain ACT-like 42
DNase I-like DNase I-like 41
PLP-dependent transferases PLP-dependent transferases 42
P-loop containing nucleoside triphosphate hydrolases CYTH-like phosphatases 42
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 41
PA domain RING/U-box 41
POZ domain TPR-like 42
Rap30/74 interaction domains "Winged helix" DNA-binding domain 42
SWIB/MDM2 domain SWIB/MDM2 domain 43
Cystatin/monellin Cystatin/monellin 41
RNase III domain-like dsRNA-binding domain-like 44
HIT/MYND zinc finger-like Creatinase/aminopeptidase 41
Translation proteins ThrRS/AlaRS common domain 43
(Phosphotyrosine protein) phosphatases II Formin homology 2 domain (FH2 domain) 41
SNARE fusion complex SNARE fusion complex 41
cAMP-binding domain-like Thioesterase/thiol ester dehydrase-isomerase 41
CO dehydrogenase ISP C-domain like FAD-binding/transporter-associated domain-like 42
Domain of poly(ADP-ribose) polymerase ADP-ribosylation 43
PreATP-grasp domain Single hybrid motif 42
Nitrite/Sulfite reductase N-terminal domain-like Nitrite/Sulfite reductase N-terminal domain-like 41
PH domain-like Protein kinase-like (PK-like) 42
FMN-linked oxidoreductases alpha-helical ferredoxin 43
RING/U-box BRCT domain 43
FYVE/PHD zinc finger SWIB/MDM2 domain 43
Trypsin-like serine proteases Trypsin-like serine proteases 42
Fe-S cluster assembly (FSCA) domain-like Fe-S cluster assembly (FSCA) domain-like 41
P-loop containing nucleoside triphosphate hydrolases Sec63 N-terminal domain-like 44
HLH, helix-loop-helix DNA-binding domain ACT-like 42
ClpP/crotonase NAD(P)-binding Rossmann-fold domains 42
FAD-binding/transporter-associated domain-like CO dehydrogenase flavoprotein C-terminal domain-like 42
RING/U-box PUA domain-like 44
Cytochrome c Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor 41
CO dehydrogenase ISP C-domain like CO dehydrogenase flavoprotein C-terminal domain-like 42
Calponin-homology domain, CH-domain EB1 dimerisation domain-like 42
Sec63 N-terminal domain-like E set domains 43
FYVE/PHD zinc finger GroEL apical domain-like 41
Ubiquitin-like Homeodomain-like 41
AraD/HMP-PK domain-like HAD-like 42
Heme oxygenase-like HAD-like 42
2Fe-2S ferredoxin-like CO dehydrogenase ISP C-domain like 42
PYP-like sensor domain (PAS domain) GAF domain-like 42
Aldolase Aminoacid dehydrogenase-like, N-terminal domain 41
GAF domain-like GAF domain-like 42
P-loop containing nucleoside triphosphate hydrolases Bromodomain 42
Actin-crosslinking proteins (Trans)glycosidases 42
Zinc beta-ribbon Cyclin-like 42
P-loop containing nucleoside triphosphate hydrolases Glucocorticoid receptor-like (DNA-binding domain) 41
Nitrite and sulphite reductase 4Fe-4S domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 41
ARM repeat "Winged helix" DNA-binding domain 41
2Fe-2S ferredoxin-like CO dehydrogenase flavoprotein C-terminal domain-like 42
Single hybrid motif ClpP/crotonase 31
BAR/IMD domain-like Ankyrin repeat 33
F-box domain WD40 repeat-like 33
NAD(P)-binding Rossmann-fold domains Citrate synthase 31
TAZ domain TAZ domain 31
WD40 repeat-like TPR-like 31
HCP-like HIT/MYND zinc finger-like 32
SAP domain RNA-binding domain, RBD 31
ARID-like HSP20-like chaperones 31
RCC1/BLIP-II Protein kinase-like (PK-like) 33
Protein kinase-like (PK-like) KA1-like 31
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 33
MIT domain P-loop containing nucleoside triphosphate hydrolases 31
CO dehydrogenase ISP C-domain like CO dehydrogenase molybdoprotein N-domain-like 31
UBA-like KA1-like 31
BAR/IMD domain-like PH domain-like 33
NAD(P)-binding Rossmann-fold domains Glutamyl tRNA-reductase dimerization domain 31
Plant lectins/antimicrobial peptides Barwin-like endoglucanases 31
PA domain Zn-dependent exopeptidases 33
Cytochrome P450 Cytochrome P450 31
Class II aaRS and biotin synthetases Translation proteins 32
Nucleotidylyl transferase Nucleotidylyl transferase 31
ARID-like FYVE/PHD zinc finger 32
Nucleotidyltransferase Poly A polymerase C-terminal region-like 32
Staphylococcal nuclease Tudor/PWWP/MBT 31
Arp2/3 complex subunits Arp2/3 complex subunits 32
N-terminal domain of adenylylcyclase associated protein, CAP C-terminal domain of adenylylcyclase associated protein 31
Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases 32
PH domain-like Ankyrin repeat 33
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 33
Homeodomain-like Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 32
Periplasmic binding protein-like II GlnB-like 31
Chromo domain-like S-adenosyl-L-methionine-dependent methyltransferases 32
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 32
Domain of the SRP/SRP receptor G-proteins Signal peptide-binding domain 32
Carbamate kinase-like Carbamate kinase-like 32
Dihydrofolate reductase-like Thymidylate synthase/dCMP hydroxymethylase 32
Bactericidal permeability-increasing protein, BPI Bactericidal permeability-increasing protein, BPI 31
Translation initiation factor 2 beta, aIF2beta, N-terminal domain ARM repeat 31
P-loop containing nucleoside triphosphate hydrolases Hypothetical protein YjiA, C-terminal domain 32
UBA-like PUG domain-like 32
Tropomyosin Tropomyosin 31
CO dehydrogenase flavoprotein C-terminal domain-like CO dehydrogenase molybdoprotein N-domain-like 31
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Adenine nucleotide alpha hydrolases-like 32
P-loop containing nucleoside triphosphate hydrolases Retrovirus zinc finger-like domains 32
PurM N-terminal domain-like PurM C-terminal domain-like 32
Thioredoxin-like Protein kinase-like (PK-like) 33
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 32
Carbon-nitrogen hydrolase Adenine nucleotide alpha hydrolases-like 32
Tetrahydrobiopterin biosynthesis enzymes-like Tetrahydrobiopterin biosynthesis enzymes-like 32
Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment DNA breaking-rejoining enzymes 31
Protease propeptides/inhibitors PA domain 31
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 32
GST C-terminal domain-like Ribosomal protein L25-like 31
Hypothetical protein c14orf129, hspc210 TPR-like 32
RNI-like ARM repeat 33
TGS-like Class II aaRS and biotin synthetases 32
PreATP-grasp domain ClpP/crotonase 31
Adenine nucleotide alpha hydrolases-like RING/U-box 31
tRNA-binding arm Class II aaRS and biotin synthetases 31
PH domain-like Bet v1-like 31
WD40 repeat-like DNase I-like 32
Clavaminate synthase-like beta-beta-alpha zinc fingers 31
Nucleic acid-binding proteins eIF-2-alpha, C-terminal domain 31
Glutathione synthetase ATP-binding domain-like ClpP/crotonase 31
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 32
FAD/NAD(P)-binding domain NAD(P)-binding Rossmann-fold domains 31
F-box domain Clavaminate synthase-like 33
FYVE/PHD zinc finger Transducin (alpha subunit), insertion domain 32
Cysteine-rich domain Cysteine-rich domain 32
MOSC N-terminal domain-like PK beta-barrel domain-like 32
Formate/glycerate dehydrogenase catalytic domain-like Serine metabolism enzymes domain 31
2Fe-2S ferredoxin-like CO dehydrogenase molybdoprotein N-domain-like 31
PH domain-like WD40 repeat-like 32
HAD-like dsRNA-binding domain-like 32
Galactose oxidase, central domain P-loop containing nucleoside triphosphate hydrolases 31
Adenine nucleotide alpha hydrolases-like Molybdenum cofactor biosynthesis proteins 31
Tudor/PWWP/MBT FYVE/PHD zinc finger 32
L domain-like Outer arm dynein light chain 1 33
C-terminal UvrC-binding domain of UvrB ApaG-like 32
E set domains E set domains 33
Hect, E3 ligase catalytic domain Protein kinase-like (PK-like) 32
eIF2alpha middle domain-like eIF-2-alpha, C-terminal domain 31
Folate-binding domain Aminomethyltransferase beta-barrel domain 31
Adenine nucleotide alpha hydrolases-like Thioredoxin-like 32
TAZ domain FYVE/PHD zinc finger 31
Endosomal sorting complex assembly domain VPS28 C-terminal domain-like 31
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 33
Nucleotidyltransferase EF-hand 31
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 32
ArfGap/RecO-like zinc finger Ankyrin repeat 33
RNA-binding domain, RBD Ran binding protein zinc finger-like 32
Translation proteins SH3-like domain Translation proteins SH3-like domain 32
Tropomyosin Apolipoprotein A-I 31
FYVE/PHD zinc finger Homeodomain-like 32
FAD-binding/transporter-associated domain-like Molybdenum cofactor-binding domain 31
RmlC-like cupins RmlC-like cupins 32
Tudor/PWWP/MBT SET domain 32
Nucleoside hydrolase Nucleoside hydrolase 32
TATA-box binding protein-like TATA-box binding protein-like 31
HD-domain/PDEase-like EF-hand 31
CO dehydrogenase flavoprotein C-terminal domain-like Molybdenum cofactor-binding domain 31
FAD/NAD(P)-binding domain EF-hand 31
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 32
CO dehydrogenase molybdoprotein N-domain-like Molybdenum cofactor-binding domain 31
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 33
PDZ domain-like ClpP/crotonase 31
Carbamate kinase-like Acyl-CoA N-acyltransferases (Nat) 32
PH domain-like Phospholipase D/nuclease 31
WD40 repeat-like DPP6 N-terminal domain-like 32
Glutamyl tRNA-reductase catalytic, N-terminal domain NAD(P)-binding Rossmann-fold domains 31
NSFL1 (p97 ATPase) cofactor p47, SEP domain Ubiquitin-like 32
DPP6 N-terminal domain-like DPP6 N-terminal domain-like 31
(Phosphotyrosine protein) phosphatases II DNA ligase/mRNA capping enzyme, catalytic domain 32
Histone-fold ARM repeat 32
Translational machinery components L30e-like 32
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 32
CO dehydrogenase ISP C-domain like Molybdenum cofactor-binding domain 31
BAR/IMD domain-like ArfGap/RecO-like zinc finger 33
TGS-like ThrRS/AlaRS common domain 32
ClpP/crotonase 6-phosphogluconate dehydrogenase C-terminal domain-like 31
GINS helical bundle-like PriA/YqbF domain 32
C2 domain (Calcium/lipid-binding domain, CaLB) vWA-like 31
Heat shock protein 70kD (HSP70), C-terminal subdomain Heat shock protein 70kD (HSP70), C-terminal subdomain 32
Nucleic acid-binding proteins eIF2alpha middle domain-like 31
2Fe-2S ferredoxin-like Molybdenum cofactor-binding domain 31
(Phosphotyrosine protein) phosphatases II Actin depolymerizing proteins 32
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 32
P-loop containing nucleoside triphosphate hydrolases Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain 32
L9 N-domain-like Ribosomal protein L9 C-domain 31
Formate/glycerate dehydrogenase catalytic domain-like ACT-like 31
beta-N-acetylhexosaminidase-like domain (Trans)glycosidases 31
4Fe-4S ferredoxins P-loop containing nucleoside triphosphate hydrolases 31
TAZ domain RING/U-box 31
Rudiment single hybrid motif ClpP/crotonase 31
WW domain WW domain 32
Class II aaRS ABD-related C-terminal domain of ProRS 33
Zinc-binding domain of translation initiation factor 2 beta ARM repeat 31
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 31
FAD-binding/transporter-associated domain-like CO dehydrogenase molybdoprotein N-domain-like 31
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 32
SMAD/FHA domain PP2C-like 31
SAP domain FYVE/PHD zinc finger 31
PH domain-like HMG-box 31
GST C-terminal domain-like Nucleotidylyl transferase 31
Restriction endonuclease-like RuvA domain 2-like 32
Staphylococcal nuclease Staphylococcal nuclease 31
Carbamate kinase-like ALDH-like 31
"Winged helix" DNA-binding domain Sec63 N-terminal domain-like 33
Glutamyl tRNA-reductase catalytic, N-terminal domain Glutamyl tRNA-reductase dimerization domain 31
PH domain-like BEACH domain 32
C-type lectin-like Protein kinase-like (PK-like) 21
CAD & PB1 domains UBA-like 21
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 22
HisI-like all-alpha NTP pyrophosphatases 22
Ankyrin repeat TPR-like 21
FYVE/PHD zinc finger Bromodomain 22
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 21
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 22
Class II aaRS and biotin synthetases C-terminal domain of ProRS 22
Alpha subunit of glutamate synthase, C-terminal domain Nucleotide-binding domain 22
WW domain P-loop containing nucleoside triphosphate hydrolases 21
CAD & PB1 domains RING/U-box 21
HAD-like Riboflavin kinase-like 21
Quinoprotein alcohol dehydrogenase-like Protein kinase-like (PK-like) 22
RNA-binding domain, RBD Surp module (SWAP domain) 21
N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 Translational machinery components 21
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 22
Clathrin heavy-chain terminal domain ARM repeat 21
Nucleic acid-binding proteins UBA-like 22
CarD-like P-loop containing nucleoside triphosphate hydrolases 21
Protein kinase-like (PK-like) Acyl-CoA dehydrogenase NM domain-like 21
L domain-like FabD/lysophospholipase-like 21
SufE/NifU NadA-like 22
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleotidylyl transferase 22
Protein kinase-like (PK-like) beta-lactamase/transpeptidase-like 22
Ribonuclease H-like Eukaryotic type KH-domain (KH-domain type I) 21
L domain-like ARM repeat 21
Ribonuclease H-like RuvA domain 2-like 21
Nucleic acid-binding proteins SH2 domain 21
UDP-Glycosyltransferase/glycogen phosphorylase GHMP Kinase, C-terminal domain 21
Tex N-terminal region-like Ribonuclease H-like 21
TPR-like PUA domain-like 22
WD40 repeat-like Tricorn protease domain 2 22
Ribonuclease H-like Ribonuclease H-like 21
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 21
Arabinanase/levansucrase/invertase Arabinanase/levansucrase/invertase 22
Activator of Hsp90 ATPase, Aha1 Bet v1-like 21
(Phosphotyrosine protein) phosphatases II Nucleic acid-binding proteins 21
Sec1/munc18-like (SM) proteins Sec1/munc18-like (SM) proteins 22
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 22
Ankyrin repeat RCC1/BLIP-II 21
Putative isomerase YbhE ARM repeat 21
Thioredoxin-like NHL repeat 21
WW domain FF domain 21
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 22
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 22
Radical SAM enzymes Acyl-CoA N-acyltransferases (Nat) 22
FMN-linked oxidoreductases FAD/NAD(P)-binding domain 21
Surp module (SWAP domain) Surp module (SWAP domain) 22
Acyl-CoA N-acyltransferases (Nat) Acyl-CoA N-acyltransferases (Nat) 21
Chaperone J-domain E set domains 21
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 21
POZ domain WD40 repeat-like 22
UBC-like UBA-like 21
RING/U-box Ran binding protein zinc finger-like 22
Actin-like ATPase domain AF1104-like 21
Thioredoxin-like FAD-dependent thiol oxidase 21
WD40 repeat-like Bromodomain 21
P-loop containing nucleoside triphosphate hydrolases Macro domain-like 22
Putative isomerase YbhE RING/U-box 21
Macro domain-like CRAL/TRIO domain 21
Nucleotide-binding domain Nucleotide-binding domain 22
Thiamin pyrophosphokinase, catalytic domain Thiamin pyrophosphokinase, substrate-binding domain 21
EF-hand TPR-like 21
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 21
S15/NS1 RNA-binding domain Class II aaRS ABD-related 21
Glycerol-3-phosphate (1)-acyltransferase EF-hand 21
HAD-like BRCT domain 22
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 21
Thioredoxin-like ERP29 C domain-like 21
2Fe-2S ferredoxin-like alpha-helical ferredoxin 21
Rad51 N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 21
S15/NS1 RNA-binding domain Class II aaRS and biotin synthetases 21
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 22
vWA-like SPOC domain-like 22
Eukaryotic type KH-domain (KH-domain type I) LigT-like 21
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 21
Calcyclin-binding protein-like HSP20-like chaperones 22
F-box domain Protein kinase-like (PK-like) 22
Elongation factor Ts (EF-Ts), dimerisation domain Elongation factor Ts (EF-Ts), dimerisation domain 22
E set domains AMPKBI-like 22
Ribonuclease H-like RING/U-box 22
Acetyl-CoA synthetase-like ACP-like 22
WD40 repeat-like SNARE fusion complex 22
BRCT domain FYVE/PHD zinc finger 22
TPR-like HSP20-like chaperones 22
FAD/NAD(P)-binding domain Thioredoxin-like 21
E set domains Cytochrome b5-like heme/steroid binding domain 22
Cysteine-rich domain NAD kinase/diacylglycerol kinase-like 22
RuvA domain 2-like SH2 domain 21
F-box domain NTF2-like 21
ATP-dependent DNA ligase DNA-binding domain DNA ligase/mRNA capping enzyme, catalytic domain 22
PLP-dependent transferases Ornithine decarboxylase C-terminal domain 21
SSo0622-like S-adenosyl-L-methionine-dependent methyltransferases 21
Ribosomal L27 protein-like Nucleic acid-binding proteins 21
Tubulin C-terminal domain-like Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 22
HAD-like Thioredoxin-like 21
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 22
Macro domain-like Zn-dependent exopeptidases 21
PRTase-like PRTase-like 22
Acyl-CoA N-acyltransferases (Nat) Bromodomain 21
P-loop containing nucleoside triphosphate hydrolases PAZ domain 22
HAD-like NHL repeat 21
SNARE-like Domain of the SRP/SRP receptor G-proteins 21
Kelch motif S-adenosyl-L-methionine-dependent methyltransferases 21
ISP domain Chlorophyll a-b binding protein 21
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 22
PUA domain-like S-adenosyl-L-methionine-dependent methyltransferases 22
FYVE/PHD zinc finger PUA domain-like 22
DNase I-like EF-hand 22
P-loop containing nucleoside triphosphate hydrolases HRDC-like 22
4'-phosphopantetheinyl transferase 4'-phosphopantetheinyl transferase 22
Oxidoreductase molybdopterin-binding domain E set domains 22
"Winged helix" DNA-binding domain Zinc beta-ribbon 21
Tex N-terminal region-like Nucleic acid-binding proteins 21
WD40 repeat-like Cyclophilin-like 21
Alpha subunit of glutamate synthase, C-terminal domain FAD/NAD(P)-binding domain 21
PAZ domain RNase III domain-like 22
Mannose-binding lectins Mannose-binding lectins 22
Putative DNA-binding domain Class II aaRS and biotin synthetases 21
Putative DNA-binding domain Putative DNA-binding domain 21
Protein kinase-like (PK-like) Acyl-CoA dehydrogenase C-terminal domain-like 21
R1 subunit of ribonucleotide reductase, N-terminal domain PFL-like glycyl radical enzymes 21
FMN-linked oxidoreductases Nucleotide-binding domain 22
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 21
ARM repeat FabD/lysophospholipase-like 21
Cytidine deaminase-like Dihydrofolate reductase-like 22
Tex N-terminal region-like RuvA domain 2-like 21
RuvA domain 2-like RuvA domain 2-like 21
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 22
Ribonuclease H-like Nucleic acid-binding proteins 21
beta-beta-alpha zinc fingers Ribonuclease H-like 22
Homeodomain-like Formin homology 2 domain (FH2 domain) 21
PUA domain-like Ribosomal protein S5 domain 2-like 22
BRCT domain WGR domain-like 21
S-adenosyl-L-methionine-dependent methyltransferases PLP-dependent transferases 22
EF-hand RING/U-box 21
UraD-Like Transthyretin (synonym: prealbumin) 21
Tex N-terminal region-like SH2 domain 21
P-loop containing nucleoside triphosphate hydrolases RNA-binding domain, RBD 22
Zn-dependent exopeptidases Transferrin receptor-like dimerisation domain 22
DNA clamp DNA clamp 21
Acetyl-CoA synthetase-like Acetyl-CoA synthetase-like 21
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Nucleotide-binding domain 22
Zinc beta-ribbon Zinc beta-ribbon 21
Chelatase Chlorophyll a-b binding protein 21
RuvA domain 2-like Nucleic acid-binding proteins 21
beta-beta-alpha zinc fingers CCCH zinc finger 21
SWIB/MDM2 domain eIF1-like 21
Nucleic acid-binding proteins Elongation factor Ts (EF-Ts), dimerisation domain 22
Tryptophan synthase beta subunit-like PLP-dependent enzymes ACT-like 21
P-loop containing nucleoside triphosphate hydrolases HAND domain of the nucleosome remodeling ATPase ISWI 21
Ribosomal L27 protein-like Eukaryotic type KH-domain (KH-domain type I) 21
PH domain-like ARM repeat 22
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 22
CCCH zinc finger WD40 repeat-like 21
CarD-like TRCF domain-like 21
Cap-Gly domain Ubiquitin-like 22
alpha-helical ferredoxin Nucleotide-binding domain 22
LEA14-like LEA14-like 21
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 21
Alpha-L RNA-binding motif Pseudouridine synthase 21
Pre-PUA domain PUA domain-like 21
TPR-like Metallo-dependent phosphatases 21
Quinoprotein alcohol dehydrogenase-like Quinoprotein alcohol dehydrogenase-like 21
F-box domain HCP-like 22
4Fe-4S ferredoxins Formate dehydrogenase/DMSO reductase, domains 1-3 22
RNA-binding domain, RBD ENTH/VHS domain 21
F-box domain Quinoprotein alcohol dehydrogenase-like 21
Arabinanase/levansucrase/invertase Nucleotide-diphospho-sugar transferases 22
Class I glutamine amidotransferase-like Ribulose-phoshate binding barrel 21
Aspartate/glutamate racemase Aspartate/glutamate racemase 21
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 21
Chaperone J-domain RNA-binding domain, RBD 21
PP2C-like Protein kinase-like (PK-like) 22
L domain-like WD40 repeat-like 22
Metallo-hydrolase/oxidoreductase Metallo-hydrolase/oxidoreductase 22
Pectin lyase-like Pectin lyase-like 21
PheT/TilS domain Class II aaRS and biotin synthetases 21
Pseudouridine synthase PUA domain-like 22
HAND domain of the nucleosome remodeling ATPase ISWI Homeodomain-like 21
PA domain Transferrin receptor-like dimerisation domain 22
(Phosphotyrosine protein) phosphatases II E set domains 22
(Trans)glycosidases Ricin B-like lectins 22
BRCT domain Domain of poly(ADP-ribose) polymerase 21
Clavaminate synthase-like Clavaminate synthase-like 21
Metalloproteases ("zincins"), catalytic domain HAD-like 21
Clavaminate synthase-like Protein kinase-like (PK-like) 22
alpha-helical ferredoxin FAD/NAD(P)-binding domain 21
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 21
DUSP-like Ubiquitin-like 21
Methionyl-tRNA synthetase (MetRS), Zn-domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 22
CBS-domain pair CAD & PB1 domains 21
SSo0622-like Kelch motif 21
Formate/glycerate dehydrogenase catalytic domain-like Formate/glycerate dehydrogenase catalytic domain-like 22
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 22
SNARE-like P-loop containing nucleoside triphosphate hydrolases 21
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 22
BRCT domain ADP-ribosylation 21
N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 L30e-like 21
PreATP-grasp domain PreATP-grasp domain 22
F-box domain ARM repeat 22
AN1-like Zinc finger AN1-like Zinc finger 22
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 22
Cytidine deaminase-like Cytidine deaminase-like 21
F-box domain L domain-like 22
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 22
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FAD/NAD(P)-binding domain 21
Chromo domain-like tRNA-guanine transglycosylase 22
Surp module (SWAP domain) ENTH/VHS domain 21
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 22
Tubulin nucleotide-binding domain-like Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 22
Ribonuclease H-like SH2 domain 21
UDP-Glycosyltransferase/glycogen phosphorylase Ribosomal protein S5 domain 2-like 21
2Fe-2S ferredoxin-like Formate dehydrogenase/DMSO reductase, domains 1-3 22
Saposin Saposin 21
Acyl-CoA binding protein Kelch motif 22
Quinoprotein alcohol dehydrogenase-like DPP6 N-terminal domain-like 21
Riboflavin synthase domain-like Riboflavin synthase domain-like 21
Kelch motif Kelch motif 22
Probable bacterial effector-binding domain Probable bacterial effector-binding domain 22
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 21
Chaperone J-domain Sec63 N-terminal domain-like 21
Putative DNA-binding domain PheT/TilS domain 21
CoA-dependent acyltransferases CoA-dependent acyltransferases 21
(Trans)glycosidases beta-Galactosidase/glucuronidase domain 22
PGBD-like DnaJ/Hsp40 cysteine-rich domain 11
Homeodomain-like RNA-binding domain, RBD 11
SAM/Pointed domain Metallo-hydrolase/oxidoreductase 11
PP2C-like cAMP-binding domain-like 11
Ran binding protein zinc finger-like Translation proteins 11
PAZ domain dsRNA-binding domain-like 11
TPR-like RNA-binding domain, RBD 11
Taf5 N-terminal domain-like WD40 repeat-like 11
XRCC4, N-terminal domain XRCC4, C-terminal oligomerization domain 11
alpha-ketoacid dehydrogenase kinase, N-terminal domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
R3H domain P-loop containing nucleoside triphosphate hydrolases 11
DNA-glycosylase Formin homology 2 domain (FH2 domain) 11
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 11
PX domain BAR/IMD domain-like 11
Translation proteins Nucleotide-diphospho-sugar transferases 11
(Trans)glycosidases Protein kinase-like (PK-like) 11
ACT-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 11
Nucleic acid-binding proteins BRCT domain 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 11
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 11
DEK C-terminal domain ssDNA-binding transcriptional regulator domain 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
Ribokinase-like Thiamin phosphate synthase 11
Rhodanese/Cell cycle control phosphatase FYVE/PHD zinc finger 11
Chitinase insertion domain Protein kinase-like (PK-like) 11
Metallo-dependent hydrolases Glutamine synthetase/guanido kinase 11
Chaperone J-domain Homeodomain-like 11
Ribonuclease H-like P-loop containing nucleoside triphosphate hydrolases 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
Undecaprenyl diphosphate synthase Undecaprenyl diphosphate synthase 11
Single hybrid motif Single hybrid motif 11
GroEL equatorial domain-like GroEL equatorial domain-like 11
C2 domain (Calcium/lipid-binding domain, CaLB) Protein kinase-like (PK-like) 11
P-loop containing nucleoside triphosphate hydrolases Phosphoglycerate mutase-like 11
Adenine nucleotide alpha hydrolases-like YjgF-like 11
Flavoproteins Radical SAM enzymes 11
Ribosomal protein S2 Nucleotide-diphospho-sugar transferases 11
FYVE/PHD zinc finger TPR-like 11
UBA-like post-AAA+ oligomerization domain-like 11
Sigma3 and sigma4 domains of RNA polymerase sigma factors Surface presentation of antigens (SPOA) 11
FAD/NAD(P)-binding domain S-adenosyl-L-methionine-dependent methyltransferases 11
Homeodomain-like Bromodomain 11
PRP4-like Functional domain of the splicing factor Prp18 11
Eukaryotic type KH-domain (KH-domain type I) Retrovirus zinc finger-like domains 11
Hypothetical protein PA1324 Starch-binding domain-like 11
ArfGap/RecO-like zinc finger Protein kinase-like (PK-like) 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
6-phosphogluconate dehydrogenase C-terminal domain-like Aldolase 11
TPR-like SET domain 11
ATP-dependent DNA ligase DNA-binding domain Nucleic acid-binding proteins 11
Cyclophilin-like RNA-binding domain, RBD 11
PRP4-like WD40 repeat-like 11
FGAM synthase PurL, linker domain PurM C-terminal domain-like 11
Glutathione synthetase ATP-binding domain-like N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) 11
P-loop containing nucleoside triphosphate hydrolases GIY-YIG endonuclease 11
Carboxypeptidase regulatory domain-like Starch-binding domain-like 11
PreATP-grasp domain Methylglyoxal synthase-like 11
Ribonuclease Rh-like Ribonuclease Rh-like 11
Rhodanese/Cell cycle control phosphatase alpha/beta-Hydrolases 11
FAD/NAD(P)-binding domain 4Fe-4S ferredoxins 11
vWA-like C-terminal domain of Ku80 11
RNI-like Glutathione synthetase ATP-binding domain-like 11
MoeA N-terminal region -like MoeA C-terminal domain-like 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
beta and beta-prime subunits of DNA dependent RNA-polymerase Ribosomal protein S2 11
SAP domain WGR domain-like 11
alpha-D-mannose-specific plant lectins Hairpin loop containing domain-like 11
alpha/beta-Hydrolases P-loop containing nucleoside triphosphate hydrolases 11
Periplasmic binding protein-like I Voltage-gated potassium channels 11
Rudiment single hybrid motif Cytochrome f subunit of the cytochrome b6f complex, transmembrane anchor 11
Trigger factor ribosome-binding domain FKBP-like 11
Thiamin diphosphate-binding fold (THDP-binding) Enolase C-terminal domain-like 11
F-box domain Pectin lyase-like 11
PDZ domain-like (Phosphotyrosine protein) phosphatases II 11
DNA-binding domain Bromodomain 11
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 11
Metallo-dependent hydrolases Glutamine synthetase, N-terminal domain 11
Cap-Gly domain L domain-like 11
C2 domain (Calcium/lipid-binding domain, CaLB) alpha/beta-Hydrolases 11
FAD/NAD(P)-binding domain Trimeric LpxA-like enzymes 11
Toll/Interleukin receptor TIR domain RNI-like 11
PDZ domain-like Rubredoxin-like 11
R3H domain Ankyrin repeat 11
F-box domain SET domain 11
HMG-box TRAF domain-like 11
PDZ domain-like TPR-like 11
Carbohydrate phosphatase Carbohydrate phosphatase 11
FGAM synthase PurL, linker domain PurM N-terminal domain-like 11
TGS-like ACT-like 11
Class I glutamine amidotransferase-like ADC synthase 11
Rhomboid-like UBA-like 11
DNA polymerase beta, N-terminal domain-like Nucleotidyltransferase 11
Outer arm dynein light chain 1 Protein kinase-like (PK-like) 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
alpha/beta knot Nucleic acid-binding proteins 11
Cytochrome b5-like heme/steroid binding domain Riboflavin synthase domain-like 11
Translational machinery components RBP11-like subunits of RNA polymerase 11
FAD/NAD(P)-binding domain alpha/beta-Hydrolases 11
AN1-like Zinc finger beta-beta-alpha zinc fingers 11
Second domain of FERM PH domain-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase S13-like H2TH domain 11
Formiminotransferase domain of formiminotransferase-cyclodeaminase. Formiminotransferase domain of formiminotransferase-cyclodeaminase. 11
Nucleotidylyl transferase Nucleic acid-binding proteins 11
Enolase C-terminal domain-like alpha/beta-Hydrolases 11
Starch-binding domain-like Glutathione synthetase ATP-binding domain-like 11
DNA repair protein MutS, domain I GIY-YIG endonuclease 11
Urease, gamma-subunit Composite domain of metallo-dependent hydrolases 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Nucleic acid-binding proteins 11
Putative isomerase YbhE YVTN repeat-like/Quinoprotein amine dehydrogenase 11
P-loop containing nucleoside triphosphate hydrolases Epsilon subunit of F1F0-ATP synthase N-terminal domain 11
HMA, heavy metal-associated domain Metal cation-transporting ATPase, ATP-binding domain N 11
(Trans)glycosidases Rhodanese/Cell cycle control phosphatase 11
RING/U-box Cyclophilin-like 11
C2 domain (Calcium/lipid-binding domain, CaLB) MHC antigen-recognition domain 11
UBA-like P-loop containing nucleoside triphosphate hydrolases 11
Hypothetical protein PA1324 Carboxypeptidase regulatory domain-like 11
Cysteine proteinases Calpain large subunit, middle domain (domain III) 11
Translational machinery components C-terminal domain of RNA polymerase alpha subunit 11
HCP-like Homing endonucleases 11
RNA-binding domain, RBD S-adenosyl-L-methionine-dependent methyltransferases 11
MHC antigen-recognition domain ARM repeat 11
FYVE/PHD zinc finger ARM repeat 11
PUA domain-like alpha/beta knot 11
Nucleic acid-binding proteins GAD domain-like 11
MoeA N-terminal region -like Molybdenum cofactor biosynthesis proteins 11
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 11
Surp module (SWAP domain) Ubiquitin-like 11
(Phosphotyrosine protein) phosphatases II NAD kinase/diacylglycerol kinase-like 11
P-loop containing nucleoside triphosphate hydrolases CCCH zinc finger 11
Voltage-gated potassium channels NAD(P)-binding Rossmann-fold domains 11
PurS-like PurM C-terminal domain-like 11
Serpins Serpins 11
SAP domain Domain of poly(ADP-ribose) polymerase 11
Chaperone J-domain Thioredoxin-like 11
PurS-like Class I glutamine amidotransferase-like 11
F-box domain P-loop containing nucleoside triphosphate hydrolases 11
Actin-crosslinking proteins Actin-crosslinking proteins 11
Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 11
Putative isomerase YbhE Quinoprotein alcohol dehydrogenase-like 11
Oxygen-evolving enhancer protein 3, Cyclophilin-like 11
Thymidylate synthase/dCMP hydroxymethylase Thymidylate synthase/dCMP hydroxymethylase 11
2Fe-2S ferredoxin-like 4Fe-4S ferredoxins 11
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 11
Molybdenum cofactor biosynthesis proteins MoeA C-terminal domain-like 11
Urease, beta-subunit Metallo-dependent hydrolases 11
Metalloproteases ("zincins"), catalytic domain ARM repeat 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
PurS-like FGAM synthase PurL, linker domain 11
Concanavalin A-like lectins/glucanases P-loop containing nucleoside triphosphate hydrolases 11
Photosystem I subunits PsaA/PsaB Photosystem I subunits PsaA/PsaB 11
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 11
FAD-linked reductases, C-terminal domain Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 11
Spermadhesin, CUB domain Protein kinase-like (PK-like) 11
ARM repeat BEACH domain 11
ACP-like Trimeric LpxA-like enzymes 11
Chaperone J-domain beta-beta-alpha zinc fingers 11
6-phosphogluconate dehydrogenase C-terminal domain-like YgbK-like 11
Acetyl-CoA synthetase-like Quinoprotein alcohol dehydrogenase-like 11
6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK Dihydropteroate synthetase-like 11
F-box domain ApaG-like 11
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 11
TPR-like SMR domain-like 11
HMA, heavy metal-associated domain Cu,Zn superoxide dismutase-like 11
Quinoprotein alcohol dehydrogenase-like RING/U-box 11
TGS-like Class II aaRS ABD-related 11
GYF domain SET domain 11
BAR/IMD domain-like Protein kinase-like (PK-like) 11
Ubiquitin-like HAD-like 11
Thioredoxin-like VC0467-like 11
Starch-binding domain-like (Trans)glycosidases 11
Ribose/Galactose isomerase RpiB/AlsB RmlC-like cupins 11
(Trans)glycosidases (Trans)glycosidases 11
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 11
BRCT domain PsbU/PolX domain-like 11
beta-Galactosidase/glucuronidase domain Galactose mutarotase-like 11
Nqo1 FMN-binding domain-like Nqo1 middle domain-like 11
Clavaminate synthase-like RING/U-box 11
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 11
Leukotriene A4 hydrolase N-terminal domain ARM repeat 11
MHC antigen-recognition domain Protein kinase-like (PK-like) 11
GYF domain CCCH zinc finger 11
PsbU/PolX domain-like Nucleotidyltransferase 11
Ubiquitin-like Acid proteases 11
PRTase-like Ribulose-phoshate binding barrel 11
Acyl-CoA binding protein Ankyrin repeat 11
BRCA2 helical domain BRCA2 tower domain 11
F-box domain Actin-like ATPase domain 11
Quinoprotein alcohol dehydrogenase-like YVTN repeat-like/Quinoprotein amine dehydrogenase 11
HCP-like HAD-like 11
CheY-like C-terminal effector domain of the bipartite response regulators 11
TPR-like FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) 11
N-terminal domain of alpha and beta subunits of F1 ATP synthase Epsilon subunit of F1F0-ATP synthase N-terminal domain 11
Tudor/PWWP/MBT RNA-binding domain, RBD 11
Apolipoprotein A-I alpha/beta-Hydrolases 11
Galactose-binding domain-like beta-Galactosidase/glucuronidase domain 11
Protein prenylyltransferase L domain-like 11
Class II aaRS and biotin synthetases GAD domain-like 11
SMI1/KNR4-like ApaG-like 11
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 11
POZ domain POZ domain 11
CCCH zinc finger S-adenosyl-L-methionine-dependent methyltransferases 11
Glutathione synthetase ATP-binding domain-like Phosphoenolpyruvate/pyruvate domain 11
Sec63 N-terminal domain-like Sec63 N-terminal domain-like 11
P-loop containing nucleoside triphosphate hydrolases PLP-dependent transferases 11
YjeF N-terminal domain-like FMN-binding split barrel 11
DHS-like NAD/FAD-binding domain Enolase C-terminal domain-like 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
Peptidyl-tRNA hydrolase-like Peptidyl-tRNA hydrolase-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
RBP11-like subunits of RNA polymerase C-terminal domain of RNA polymerase alpha subunit 11
Protein kinase-like (PK-like) (Phosphotyrosine protein) phosphatases II 11
SAP domain ADP-ribosylation 11
Thioredoxin-like "Winged helix" DNA-binding domain 11
DNA polymerase beta, N-terminal domain-like PsbU/PolX domain-like 11
FAD/NAD(P)-binding domain SMAD/FHA domain 11
Thiamin diphosphate-binding fold (THDP-binding) alpha/beta-Hydrolases 11
PH domain-like BSD domain-like 11
SAP domain DNase I-like 11
Urease, beta-subunit Composite domain of metallo-dependent hydrolases 11
beta-Galactosidase/glucuronidase domain beta-Galactosidase/glucuronidase domain 11
Six-hairpin glycosidases AbfB domain 11
POZ domain Tricorn protease domain 2 11
beta-beta-alpha zinc fingers S-adenosyl-L-methionine-dependent methyltransferases 11
Nucleic acid-binding proteins BRCA2 tower domain 11
Ankyrin repeat RNA-binding domain, RBD 11
PreATP-grasp domain N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) 11
Second domain of FERM P-loop containing nucleoside triphosphate hydrolases 11
Glutamine synthetase/guanido kinase GatB/YqeY motif 11
Adenine nucleotide alpha hydrolases-like DHS-like NAD/FAD-binding domain 11
YjgF-like YjgF-like 11
Sigma2 domain of RNA polymerase sigma factors Surface presentation of antigens (SPOA) 11
HMG-box HMG-box 11
Retrovirus zinc finger-like domains Actin depolymerizing proteins 11
HCP-like SMR domain-like 11
Cryptochrome/photolyase, N-terminal domain alpha/beta-Hydrolases 11
SNARE fusion complex Glycoside hydrolase/deacetylase 11
"Winged helix" DNA-binding domain Protein kinase-like (PK-like) 11
Phosphofructokinase Phosphofructokinase 11
DHS-like NAD/FAD-binding domain alpha/beta-Hydrolases 11
F-box domain LysM domain 11
Lipocalins Lipocalins 11
L domain-like Formin homology 2 domain (FH2 domain) 11
ACT-like Formyltransferase 11
Diaminopimelate epimerase-like Diaminopimelate epimerase-like 11
Retrovirus zinc finger-like domains Plus3-like 11
Nucleotide-diphospho-sugar transferases ARM repeat 11
PDZ domain-like E set domains 11
Ran binding protein zinc finger-like EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 11
FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) Protein kinase-like (PK-like) 11
Enolase N-terminal domain-like alpha/beta-Hydrolases 11
DNA-glycosylase Nudix 11
SWIB/MDM2 domain CCCH zinc finger 11
DHS-like NAD/FAD-binding domain Enolase N-terminal domain-like 11
Eukaryotic type KH-domain (KH-domain type I) RNA-binding domain, RBD 11
Quinoprotein alcohol dehydrogenase-like 3-carboxy-cis,cis-mucoante lactonizing enzyme 11
Acetyl-CoA synthetase-like Heme-dependent catalase-like 11
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 11
Obg GTP-binding protein N-terminal domain Obg GTP-binding protein C-terminal domain 11
SPOC domain-like SAP domain 11
S13-like H2TH domain Ribosomal protein S5 domain 2-like 11
Tropomyosin Nucleotide-diphospho-sugar transferases 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
ACP-like Quinoprotein alcohol dehydrogenase-like 11
Concanavalin A-like lectins/glucanases Calpain large subunit, middle domain (domain III) 11
P-loop containing nucleoside triphosphate hydrolases RuvA domain 2-like 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
Urease, gamma-subunit Metallo-dependent hydrolases 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
GroEL-intermediate domain like GroEL-intermediate domain like 11
Concanavalin A-like lectins/glucanases Cysteine proteinases 11
Translation proteins SH3-like domain Cytochrome b5-like heme/steroid binding domain 11
Acetyl-CoA synthetase-like Trimeric LpxA-like enzymes 11
FYSH domain Hypothetical protein AF0491, middle domain 11
Chaperone J-domain HSC20 (HSCB), C-terminal oligomerisation domain 11
Cysteine proteinases Sec-C motif 11
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 11
Calcium-dependent phosphotriesterase WD40 repeat-like 11
Double Clp-N motif Double Clp-N motif 11
UBC-like RING/U-box 11
"Winged helix" DNA-binding domain E set domains 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleic acid-binding proteins 11
Oxidoreductase molybdopterin-binding domain Cytochrome b5-like heme/steroid binding domain 11
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 11
FAD/NAD(P)-binding domain Acetyl-CoA synthetase-like 11
Protein kinase-like (PK-like) BEACH domain 11
C-terminal, gelsolin-like domain of Sec23/24 VHP, Villin headpiece domain 11
Nqo1 FMN-binding domain-like Nqo1C-terminal domain-like 11
Dihydrofolate reductase-like YbiA-like 11
PLP-dependent transferases PK beta-barrel domain-like 11
ARM repeat FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) 11
PYP-like sensor domain (PAS domain) CheY-like 11
UBC-like Protein kinase-like (PK-like) 11
PRC-barrel domain Nucleotide-diphospho-sugar transferases 11
Chalcone isomerase Chalcone isomerase 11
CCCH zinc finger HIT-like 11
BRCT domain P-loop containing nucleoside triphosphate hydrolases 11
POZ domain Pentapeptide repeat-like 11
FGAM synthase PurL, linker domain Class I glutamine amidotransferase-like 11
Carbamate kinase-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 11
Protein kinase-like (PK-like) NTF2-like 11
NHL repeat WD40 repeat-like 11
ARM repeat Chaperone J-domain 11
PapD-like Ankyrin repeat 11
Lysozyme-like Lysozyme-like 11
P-loop containing nucleoside triphosphate hydrolases HIT-like 11
Nucleic acid-binding proteins S-adenosyl-L-methionine-dependent methyltransferases 11
Macro domain-like HIT-like 11
BRCT domain Nucleotidyltransferase 11
FAD/NAD(P)-binding domain Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 11
FYVE/PHD zinc finger GYF domain 11
WD40 repeat-like 3-carboxy-cis,cis-mucoante lactonizing enzyme 11
E set domains RNA-binding domain, RBD 11
FYVE/PHD zinc finger DNA-binding domain 11
BSD domain-like BSD domain-like 11
L domain-like Ubiquitin-like 11
E set domains Ferredoxin reductase-like, C-terminal NADP-linked domain 11
UBA-like NSFL1 (p97 ATPase) cofactor p47, SEP domain 11
Second domain of FERM Prismane protein-like 11
L9 N-domain-like Ribonuclease H-like 11
BRCT domain post-AAA+ oligomerization domain-like 11
WD40 repeat-like Tricorn protease N-terminal domain 11
HD-domain/PDEase-like TGS-like 11
ARM repeat Tudor/PWWP/MBT 11
F-box domain SMI1/KNR4-like 11
Ankyrin repeat S-adenosyl-L-methionine-dependent methyltransferases 11
Concanavalin A-like lectins/glucanases BEACH domain 11
Hairpin loop containing domain-like Protein kinase-like (PK-like) 11
TPR-like PH domain-like 11
TATA-box binding protein-like DNA-glycosylase 11
Concanavalin A-like lectins/glucanases RING/U-box 11
PurS-like PurM N-terminal domain-like 11
Tricorn protease N-terminal domain DPP6 N-terminal domain-like 11
NAD(P)-binding Rossmann-fold domains YgbK-like 11
Calcium-dependent phosphotriesterase Calcium-dependent phosphotriesterase 11
GST C-terminal domain-like GST C-terminal domain-like 11
Cytochrome f, large domain Rudiment single hybrid motif 11
FMN-dependent nitroreductase-like FMN-dependent nitroreductase-like 11
SAP domain SAP domain 11
FYVE/PHD zinc finger Clavaminate synthase-like 11
Ribonuclease H-like L domain-like 11
Rudiment single hybrid motif N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) 11
Phosphoglycerate mutase-like Phosphoglycerate mutase-like 11
PIN domain-like Nucleic acid-binding proteins 11
vWA-like SAP domain 11
Galactose oxidase, central domain Tropomyosin 11
Nqo1 middle domain-like Nqo1C-terminal domain-like 11
cAMP-binding domain-like cAMP-binding domain-like 11
Concanavalin A-like lectins/glucanases PH domain-like 11
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 11
LDL receptor-like module Mannose 6-phosphate receptor domain 11
FKBP-like Rhodanese/Cell cycle control phosphatase 11
C-terminal domain of alpha and beta subunits of F1 ATP synthase Epsilon subunit of F1F0-ATP synthase N-terminal domain 11
Trimeric LpxA-like enzymes Heme-dependent catalase-like 11
Translational machinery components Insert subdomain of RNA polymerase alpha subunit 11
F-box domain HIT/MYND zinc finger-like 11
Cyclophilin-like TPR-like 11
SMAD/FHA domain Phospholipase D/nuclease 11
Nucleotidyltransferase TGS-like 11
(Phosphotyrosine protein) phosphatases II (Phosphotyrosine protein) phosphatases II 11
PLP-dependent transferases MOSC N-terminal domain-like 11
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 11
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 11
PH domain-like "Winged helix" DNA-binding domain 11
FYVE/PHD zinc finger CCCH zinc finger 11
Voltage-gated potassium channels Periplasmic binding protein-like II 11
vWA-like Cysteine-rich domain 11
Tricorn protease domain 2 alpha/beta-Hydrolases 11
ARM repeat Concanavalin A-like lectins/glucanases 11
cAMP-binding domain-like Protein kinase-like (PK-like) 11
SPOC domain-like C-terminal domain of Ku80 11
Ran binding protein zinc finger-like P-loop containing nucleoside triphosphate hydrolases 11
Trimeric LpxA-like enzymes Trimeric LpxA-like enzymes 11
Carbamate kinase-like NAD(P)-binding Rossmann-fold domains 11
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 11
BRCT domain DNA polymerase beta, N-terminal domain-like 11
DNA primase core P-loop containing nucleoside triphosphate hydrolases 11
L30e-like alpha/beta knot 11
PurM N-terminal domain-like Class I glutamine amidotransferase-like 11
FYVE/PHD zinc finger alpha/beta-Hydrolases 11
Class II aaRS and biotin synthetases HD-domain/PDEase-like 11
Fumarylacetoacetate hydrolase, FAH, N-terminal domain FAH 11
Acid proteases UBA-like 11
HIT-like HIT-like 11
Tricorn protease domain 2 DPP6 N-terminal domain-like 11
E set domains Riboflavin synthase domain-like 11
ACP-like Heme-dependent catalase-like 11
CAD & PB1 domains CAD & PB1 domains 11
Translation proteins PRC-barrel domain 11
ARM repeat alpha/beta-Hydrolases 11
Formate/glycerate dehydrogenase catalytic domain-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 11
Starch-binding domain-like Nucleic acid-binding proteins 11
SWIB/MDM2 domain GYF domain 11
SufE/NifU BolA-like 11
IlvD/EDD N-terminal domain-like IlvD/EDD N-terminal domain-like 11
Nucleotidyltransferase ACT-like 11
Starch-binding domain-like P-loop containing nucleoside triphosphate hydrolases 11
lambda repressor-like DNA-binding domains Cyanase C-terminal domain 11
Formyltransferase FMT C-terminal domain-like 11
Nucleic acid-binding proteins "Winged helix" DNA-binding domain 11
Actin-like ATPase domain HD-domain/PDEase-like 11
GroEL-intermediate domain like SAICAR synthase-like 11
SMAD/FHA domain BRCT domain 11
Plus3-like CCCH zinc finger 11
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 11
HD-domain/PDEase-like ACT-like 11
BRCA2 helical domain Nucleic acid-binding proteins 11
Concanavalin A-like lectins/glucanases WD40 repeat-like 11
HIT/MYND zinc finger-like SET domain 11
Chromo domain-like Ankyrin repeat 11
Fucose-specific lectin Fucose-specific lectin 11
FYSH domain beta-beta-alpha zinc fingers 11
Rhomboid-like Ran binding protein zinc finger-like 11
Starch-binding domain-like Starch-binding domain-like 11
Methylglyoxal synthase-like Cytidine deaminase-like 11
Zn-dependent exopeptidases Carboxypeptidase regulatory domain-like 11
Cytochrome b5-like heme/steroid binding domain Ferredoxin reductase-like, C-terminal NADP-linked domain 11
P-loop containing nucleoside triphosphate hydrolases vWA-like 11
Actin depolymerizing proteins C-terminal, gelsolin-like domain of Sec23/24 11
ARID-like Clavaminate synthase-like 11
Thiamin phosphate synthase P-loop containing nucleoside triphosphate hydrolases 11
Trimeric LpxA-like enzymes ARM repeat 11
Chaperone J-domain CSL zinc finger 11
Starch-binding domain-like Phosphoglycerate mutase-like 11
Nucleic acid-binding proteins TPR-like 11
YgbK-like Aldolase 11
Peptide methionine sulfoxide reductase Peptide methionine sulfoxide reductase 11
SAP domain CCCH zinc finger 11
P-loop containing nucleoside triphosphate hydrolases Prismane protein-like 11
ARM repeat Tricorn protease domain 2 11
PH domain-like Prismane protein-like 11
FYVE/PHD zinc finger Chromo domain-like 11
Thiamin diphosphate-binding fold (THDP-binding) Enolase N-terminal domain-like 11
PIN domain-like Chromo domain-like 11
P-loop containing nucleoside triphosphate hydrolases Obg GTP-binding protein C-terminal domain 11
Plus3-like GYF domain 11
FAD-linked reductases, C-terminal domain 4Fe-4S ferredoxins 11
PurM C-terminal domain-like Class I glutamine amidotransferase-like 11
Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e 11
Thioredoxin-like Six-hairpin glycosidases 11
FAD/NAD(P)-binding domain Heme-dependent catalase-like 11
Dcp2 domain-like Nudix 11
Hypothetical protein AF0491, middle domain beta-beta-alpha zinc fingers 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
PRC-barrel domain PRC-barrel domain 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
Cytidine deaminase-like YbiA-like 11
FAD/NAD(P)-binding domain ACP-like 11
Urease, gamma-subunit Urease, beta-subunit 11

Jump to [ Top of page · Add/remove domain pairs · Add/remove genomes · Domain combination pairs ]