SUPERFAMILY 1.75 HMM library and genome assignments server

Domain combination pairs in Entamoeba invadens 1.2

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

  • For a list of unique full length architectures for this genome click here (can be slow).
Adjacent domain pairs graph

Graph of adjacent domain pairs.


Add or remove domain pairs

The links below permit the addition or removal of specific sets of domain combination pairs.


Jump to [ Top of page · Add/remove domain pairs · Domain combination pairs ]

Add or remove genomes

Change the list of genome two-letter codes in the 'Include genomes' box to include domain-pairs from those genomes.
Change the list of genomes in the 'Exclude genomes' box to exclude domain-pairs from those genomes.
List of all two-letter genome codes.

Add or remove genomes:
Include genomes:
Exclude genomes:


Jump to [ Top of page · Add/remove domain pairs · Add/remove genomes ]

Domain combination pairs

614 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
Growth factor receptor domain Growth factor receptor domain 593202
Growth factor receptor domain Protein kinase-like (PK-like) 395121
L domain-like L domain-like 19437
Actin-like ATPase domain Actin-like ATPase domain 9712
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 7126
DBL homology domain (DH-domain) PH domain-like 4717
Ypt/Rab-GAP domain of gyp1p Ypt/Rab-GAP domain of gyp1p 447
L domain-like Growth factor receptor domain 3828
RNA-binding domain, RBD Retrovirus zinc finger-like domains 3112
RNA-binding domain, RBD RNA-binding domain, RBD 2914
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 249
ARM repeat ARM repeat 2315
PH domain-like Protein kinase-like (PK-like) 2210
Protein kinase-like (PK-like) ARM repeat 2113
ABC transporter transmembrane region ABC transporter transmembrane region 206
Metal cation-transporting ATPase, ATP-binding domain N Calcium ATPase, transmembrane domain M 194
Protein kinase-like (PK-like) SH2 domain 193
HAD-like Calcium ATPase, transmembrane domain M 194
Metal cation-transporting ATPase, ATP-binding domain N HAD-like 194
DBL homology domain (DH-domain) FYVE/PHD zinc finger 194
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 183
F-box domain WD40 repeat-like 183
PH domain-like FYVE/PHD zinc finger 183
RING/U-box RING/U-box 188
Calcium ATPase, transduction domain A HAD-like 183
Calcium ATPase, transduction domain A Metal cation-transporting ATPase, ATP-binding domain N 183
Ribonuclease H-like DNA/RNA polymerases 173
P-loop containing nucleoside triphosphate hydrolases Translation proteins 177
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 166
(Phosphotyrosine protein) phosphatases II L domain-like 167
Metallo-hydrolase/oxidoreductase SCP-like 163
BAR/IMD domain-like SH3-domain 152
L domain-like PP2C-like 144
SMAD/FHA domain Protein kinase-like (PK-like) 132
TPR-like TPR-like 138
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 123
Thioredoxin-like Thioredoxin-like 127
Protein kinase-like (PK-like) Protein kinase-like (PK-like) 125
Cullin homology domain "Winged helix" DNA-binding domain 112
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 112
Zn-finger domain of Sec23/24 vWA-like 116
EF-hand EF-hand 116
L domain-like Protein kinase-like (PK-like) 117
RNI-like L domain-like 106
GroEL equatorial domain-like GroEL-intermediate domain like 103
C2 domain (Calcium/lipid-binding domain, CaLB) Protein kinase-like (PK-like) 104
PH domain-like PH domain-like 108
Ankyrin repeat FabD/lysophospholipase-like 102
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 96
PH domain-like GTPase activation domain, GAP 93
GroEL-intermediate domain like GroEL apical domain-like 92
Calponin-homology domain, CH-domain DBL homology domain (DH-domain) 97
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 95
GroEL equatorial domain-like GroEL apical domain-like 92
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 82
Calponin-homology domain, CH-domain PH domain-like 87
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 82
ARM repeat DBL homology domain (DH-domain) 83
Chaperone J-domain HSP40/DnaJ peptide-binding domain 85
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 83
ARM repeat Formin homology 2 domain (FH2 domain) 85
Cullin repeat-like Cullin homology domain 81
Actin depolymerizing proteins Actin depolymerizing proteins 88
Cullin repeat-like "Winged helix" DNA-binding domain 81
ARM repeat Clathrin adaptor appendage domain 85
C2 domain (Calcium/lipid-binding domain, CaLB) ARM repeat 83
Sec7 domain ARM repeat 73
Barwin-like endoglucanases PHL pollen allergen 73
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 71
Ankyrin repeat Ankyrin repeat 75
(Phosphotyrosine protein) phosphatases II Protein kinase-like (PK-like) 73
Actin depolymerizing proteins VHP, Villin headpiece domain 77
PH domain-like (Phosphotyrosine protein) phosphatases II 73
Nucleic acid-binding proteins Translation proteins SH3-like domain 72
Cyclin-like Cyclin-like 74
Ubiquitin-like C2 domain (Calcium/lipid-binding domain, CaLB) 62
beta-sandwich domain of Sec23/24 Zn-finger domain of Sec23/24 65
Nucleotidyltransferase PAP/OAS1 substrate-binding domain 64
E set domains E set domains 66
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 63
ARM repeat Rap/Ran-GAP 63
Ubiquitin-like Protein kinase-like (PK-like) 62
PH domain-like BEACH domain 65
Barwin-like endoglucanases Galactose-binding domain-like 62
Cysteine proteinases Growth factor receptor domain 65
beta-sandwich domain of Sec23/24 vWA-like 65
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 66
PHL pollen allergen Galactose-binding domain-like 62
Cysteine-rich domain NAD kinase/diacylglycerol kinase-like 65
WD40 repeat-like WD40 repeat-like 62
WD40 repeat-like PH domain-like 65
Nucleic acid-binding proteins Nucleic acid-binding proteins 66
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 65
Ubiquitin-like ARM repeat 62
Cysteine-rich domain Cysteine-rich domain 65
DNase I-like GTPase activation domain, GAP 63
BEACH domain WD40 repeat-like 65
Ankyrin repeat Ypt/Rab-GAP domain of gyp1p 63
(Trans)glycosidases Chitinase insertion domain 52
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 54
CCCH zinc finger CCCH zinc finger 54
WW domain C2 domain (Calcium/lipid-binding domain, CaLB) 52
PH domain-like ArfGap/RecO-like zinc finger 54
Tropomyosin Myosin rod fragments 54
DBL homology domain (DH-domain) ArfGap/RecO-like zinc finger 54
Acetyl-CoA synthetase-like ACP-like 55
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 52
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 52
Acetyl-CoA synthetase-like NAD(P)-binding Rossmann-fold domains 55
Ankyrin repeat Rap/Ran-GAP 51
BRCT domain BRCT domain 53
ACP-like NAD(P)-binding Rossmann-fold domains 55
SH3-domain SH3-domain 55
Ubiquitin-like UBA-like 54
TATA-box binding protein-like TATA-box binding protein-like 52
SNARE-like Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor 51
Calponin-homology domain, CH-domain ArfGap/RecO-like zinc finger 54
Ypt/Rab-GAP domain of gyp1p Rhodanese/Cell cycle control phosphatase 51
Glucocorticoid receptor-like (DNA-binding domain) Glucocorticoid receptor-like (DNA-binding domain) 54
RNI-like RNI-like 53
Ras GEF GTPase activation domain, GAP 52
(Trans)glycosidases Glycosyl hydrolase domain 54
WD40 repeat-like Quinoprotein alcohol dehydrogenase-like 53
ARM repeat WD40 repeat-like 53
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 52
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 53
Thioredoxin-like ERP29 C domain-like 41
P-loop containing nucleoside triphosphate hydrolases EF-hand 42
L domain-like NTF2-like 42
ALDH-like Dehydroquinate synthase-like 41
PLP-binding barrel Alanine racemase C-terminal domain-like 42
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 42
Invasin/intimin cell-adhesion fragments Invasin/intimin cell-adhesion fragments 42
Invasin/intimin cell-adhesion fragments Cysteine proteinases 42
Sec63 N-terminal domain-like E set domains 44
TK C-terminal domain-like 4Fe-4S ferredoxins 41
Thiolase-like Thiolase-like 41
Thiamin diphosphate-binding fold (THDP-binding) Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 41
Chromo domain-like P-loop containing nucleoside triphosphate hydrolases 42
(Phosphotyrosine protein) phosphatases II C2 domain (Calcium/lipid-binding domain, CaLB) 42
4Fe-4S ferredoxins FMN-dependent nitroreductase-like 41
P-loop containing nucleoside triphosphate hydrolases Sec63 N-terminal domain-like 44
TK C-terminal domain-like Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 41
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 41
Ankyrin repeat Protein kinase-like (PK-like) 44
UBA-like RING/U-box 43
Mib/herc2 domain-like Mib/herc2 domain-like 41
F-box domain RNI-like 42
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 42
P-loop containing nucleoside triphosphate hydrolases Myosin rod fragments 43
Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 4Fe-4S ferredoxins 41
HCP-like HCP-like 44
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 41
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 42
Metallo-hydrolase/oxidoreductase Metallo-hydrolase/oxidoreductase 41
SNARE-like SNARE fusion complex 42
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 43
Ubiquitin-like ADP-ribosylation 42
Class II aaRS and biotin synthetases Class II aaRS ABD-related 44
4Fe-4S ferredoxins Fe-only hydrogenase 42
POZ domain Skp1 dimerisation domain-like 41
Tropomyosin Tropomyosin 44
Pentapeptide repeat-like Pentapeptide repeat-like 42
Thiamin diphosphate-binding fold (THDP-binding) 4Fe-4S ferredoxins 41
Metallo-dependent hydrolases Metallo-dependent hydrolases 41
DBL homology domain (DH-domain) DBL homology domain (DH-domain) 43
P-loop containing nucleoside triphosphate hydrolases Smc hinge domain 42
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 32
ADC-like Cdc48 domain 2-like 32
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 31
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 32
Concanavalin A-like lectins/glucanases PH domain-like 32
Staphylococcal nuclease Staphylococcal nuclease 33
PriA/YqbF domain GINS helical bundle-like 32
PapD-like Protein kinase-like (PK-like) 33
Concanavalin A-like lectins/glucanases BEACH domain 32
FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) Protein kinase-like (PK-like) 33
beta-sandwich domain of Sec23/24 C-terminal, gelsolin-like domain of Sec23/24 33
GTPase activation domain, GAP Ankyrin repeat 32
Cdc48 domain 2-like P-loop containing nucleoside triphosphate hydrolases 32
PH domain-like SH3-domain 32
Chromo domain-like Chromo domain-like 31
beta-beta-alpha zinc fingers beta-beta-alpha zinc fingers 32
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 33
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 33
E set domains C2 domain (Calcium/lipid-binding domain, CaLB) 31
C2 domain (Calcium/lipid-binding domain, CaLB) C2 domain (Calcium/lipid-binding domain, CaLB) 32
UBA-like UBA-like 33
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein S5 domain 2-like 32
BAR/IMD domain-like GTPase activation domain, GAP 32
vWA-like Helical domain of Sec23/24 33
ARM repeat FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) 33
E set domains WW domain 31
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 32
beta-sandwich domain of Sec23/24 Helical domain of Sec23/24 33
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 31
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 31
Phospholipase D/nuclease Phospholipase D/nuclease 32
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 33
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 32
RNA-binding domain, RBD PABC (PABP) domain 33
Translation proteins EF-G C-terminal domain-like 32
Actin-crosslinking proteins Actin-crosslinking proteins 33
vWA-like C-terminal, gelsolin-like domain of Sec23/24 33
Retrovirus zinc finger-like domains Retrovirus zinc finger-like domains 33
GTPase activation domain, GAP CRAL/TRIO domain 32
beta-N-acetylhexosaminidase-like domain (Trans)glycosidases 31
F-box domain L domain-like 31
"Winged helix" DNA-binding domain Sec63 N-terminal domain-like 33
RCC1/BLIP-II Ras GEF 32
PAZ domain Ribonuclease H-like 33
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 33
Ankyrin repeat SH3-domain 33
PX domain PH domain-like 32
EF-G C-terminal domain-like EF-G C-terminal domain-like 32
Staphylococcal nuclease Tudor/PWWP/MBT 33
GTPase activation domain, GAP RNI-like 31
Starch-binding domain-like (Trans)glycosidases 32
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 31
ARM repeat Subdomain of clathrin and coatomer appendage domain 32
EF-G C-terminal domain-like Ribosomal protein S5 domain 2-like 32
Helical domain of Sec23/24 C-terminal, gelsolin-like domain of Sec23/24 33
Nucleotidylyl transferase Nucleotidylyl transferase 31
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 32
Leukotriene A4 hydrolase N-terminal domain Metalloproteases ("zincins"), catalytic domain 31
DBL homology domain (DH-domain) GTPase activation domain, GAP 32
Concanavalin A-like lectins/glucanases WD40 repeat-like 32
Translation proteins Ribosomal protein S5 domain 2-like 32
ADC-like P-loop containing nucleoside triphosphate hydrolases 32
Calponin-homology domain, CH-domain E set domains 33
Clathrin adaptor appendage domain Subdomain of clathrin and coatomer appendage domain 32
E set domains Protein kinase-like (PK-like) 32
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 32
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 33
Ribonuclease H-like HRDC-like 22
Ubiquitin-like Ubiquitin-like 22
PGBD-like PGBD-like 22
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase HSP90 C-terminal domain 22
Nucleic acid-binding proteins Eukaryotic type KH-domain (KH-domain type I) 22
Creatinase/aminopeptidase "Winged helix" DNA-binding domain 21
NSFL1 (p97 ATPase) cofactor p47, SEP domain Ubiquitin-like 21
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 21
Kelch motif Protein kinase-like (PK-like) 22
Clc chloride channel CBS-domain pair 21
Protein kinase-like (PK-like) HCP-like 22
WD40 repeat-like BRCT domain 21
L domain-like VHP, Villin headpiece domain 22
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 22
Composite domain of metallo-dependent hydrolases Metallo-dependent hydrolases 22
(Trans)glycosidases Six-hairpin glycosidases 21
PLP-dependent transferases PLP-dependent transferases 21
Profilin (actin-binding protein) Profilin (actin-binding protein) 21
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 22
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 22
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 21
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 21
Myosin rod fragments Myosin rod fragments 22
Galactose mutarotase-like (Trans)glycosidases 21
Ribosomal protein L6 Ribosomal protein L6 21
PRTase-like PRTase-like 21
GTPase activation domain, GAP WD40 repeat-like 22
Quinoprotein alcohol dehydrogenase-like Cysteine-rich domain 22
(Trans)glycosidases Beta-D-glucan exohydrolase, C-terminal domain 21
GroES-like NAD(P)-binding Rossmann-fold domains 21
Pectin lyase-like Pectin lyase-like 21
Aminopeptidase/glucanase lid domain Zn-dependent exopeptidases 21
WWE domain BRCT domain 22
Hypothetical protein AF0491, middle domain EF-G C-terminal domain-like 22
TPR-like Metallo-dependent phosphatases 21
Activating enzymes of the ubiquitin-like proteins Activating enzymes of the ubiquitin-like proteins 21
"Winged helix" DNA-binding domain Zinc beta-ribbon 22
Cysteine-rich domain ARM repeat 22
SAICAR synthase-like SAICAR synthase-like 22
Metallo-hydrolase/oxidoreductase Flavoproteins 21
ARM repeat PH domain-like 22
P-loop containing nucleoside triphosphate hydrolases TGS-like 21
Outer arm dynein light chain 1 (Phosphotyrosine protein) phosphatases II 21
Nucleotidylyl transferase Ribosomal protein L25-like 22
GTPase activation domain, GAP RGC domain-like 21
(Trans)glycosidases (Trans)glycosidases 21
ARM repeat Chaperone J-domain 22
Starch-binding domain-like Starch-binding domain-like 21
Galactose-binding domain-like (Trans)glycosidases 22
Zinc beta-ribbon Cyclin-like 22
Zn-finger domain of Sec23/24 C-terminal, gelsolin-like domain of Sec23/24 22
Protein kinase-like (PK-like) SH3-domain 22
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 21
FAD/NAD(P)-binding domain CPE0013-like 22
PX domain Protein kinase-like (PK-like) 21
Zn-finger domain of Sec23/24 Helical domain of Sec23/24 22
FAD-linked reductases, C-terminal domain CPE0013-like 22
Rad51 N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 22
PLP-dependent transferases Ornithine decarboxylase C-terminal domain 21
Homeodomain-like Homeodomain-like 22
Ubiquitin-like XPC-binding domain 22
L domain-like Actin depolymerizing proteins 22
WD40 repeat-like Putative isomerase YbhE 22
ENTH/VHS domain I/LWEQ domain 22
Protein kinase-like (PK-like) Polo-box domain 21
ArfGap/RecO-like zinc finger Ankyrin repeat 21
N-terminal, heterodimerisation domain of RBP7 (RpoE) Nucleic acid-binding proteins 21
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 22
alpha/beta-Hydrolases SAM/Pointed domain 22
Ribosomal protein S5 domain 2-like HSP90 C-terminal domain 22
RING/U-box B-box zinc-binding domain 22
Translational machinery components L30e-like 22
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 22
Nucleotidyltransferase Poly A polymerase C-terminal region-like 22
Chaperone J-domain E set domains 22
Cysteine-rich domain Formin homology 2 domain (FH2 domain) 22
Calponin-homology domain, CH-domain VHP, Villin headpiece domain 21
Ferritin-like Rubredoxin-like 21
RING/U-box Homeodomain-like 21
Outer arm dynein light chain 1 WD40 repeat-like 22
C2 domain (Calcium/lipid-binding domain, CaLB) Rap/Ran-GAP 22
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 21
ThrRS/AlaRS common domain P-loop containing nucleoside triphosphate hydrolases 21
Chaperone J-domain Sec63 N-terminal domain-like 22
UBA-like XPC-binding domain 22
Galactose mutarotase-like Glycosyl hydrolase domain 21
FMN-dependent nitroreductase-like FMN-dependent nitroreductase-like 21
alpha-helical ferredoxin Nucleotide-binding domain 21
Dcp2 domain-like Nudix 21
FKBP-like TPR-like 21
PH domain-like L domain-like 21
Calpain large subunit, middle domain (domain III) Calpain large subunit, middle domain (domain III) 22
DBL homology domain (DH-domain) VHP, Villin headpiece domain 21
Protein kinase-like (PK-like) Ribosomal protein S2 11
CCCH zinc finger RING/U-box 11
Calponin-homology domain, CH-domain EF-hand 11
Eukaryotic RPB5 N-terminal domain RPB5-like RNA polymerase subunit 11
ARM repeat BEACH domain 11
L domain-like P-loop containing nucleoside triphosphate hydrolases 11
GTPase activation domain, GAP Quinoprotein alcohol dehydrogenase-like 11
Nucleotidylyl transferase Nucleic acid-binding proteins 11
FYVE/PHD zinc finger ARM repeat 11
Cysteine proteinases Cysteine proteinases 11
ATP-dependent DNA ligase DNA-binding domain Nucleic acid-binding proteins 11
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
Cytidine deaminase-like Cytidine deaminase-like 11
vWA-like Cysteine-rich domain 11
RING/U-box SAP domain 11
RING/U-box F-box domain 11
VPS9 domain P-loop containing nucleoside triphosphate hydrolases 11
eIF2alpha middle domain-like eIF-2-alpha, C-terminal domain 11
ATP-dependent DNA ligase DNA-binding domain DNA ligase/mRNA capping enzyme, catalytic domain 11
N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 L30e-like 11
E set domains Actin-like ATPase domain 11
Protein kinase-like (PK-like) P-loop containing nucleoside triphosphate hydrolases 11
HAD-like P-loop containing nucleoside triphosphate hydrolases 11
NTF2-like UBA-like 11
Chromo domain-like Acyl-CoA N-acyltransferases (Nat) 11
UBC-like ADP-ribosylation 11
Zinc-binding domain of translation initiation factor 2 beta ARM repeat 11
post-HMGL domain-like Single hybrid motif 11
Homo-oligomeric flavin-containing Cys decarboxylases, HFCD CoaB-like 11
(Phosphotyrosine protein) phosphatases II Actin depolymerizing proteins 11
Glucocorticoid receptor-like (DNA-binding domain) ADP-ribosylation 11
ClpP/crotonase post-HMGL domain-like 11
ClpP/crotonase Single hybrid motif 11
EPT/RTPC-like EPT/RTPC-like 11
E set domains (Trans)glycosidases 11
L domain-like UBA-like 11
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 11
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
WD40 repeat-like RNA-binding domain, RBD 11
DBL homology domain (DH-domain) Glucocorticoid receptor-like (DNA-binding domain) 11
SNARE-like Domain of the SRP/SRP receptor G-proteins 11
SMAD/FHA domain RING/U-box 11
F1F0 ATP synthase subunit C F1F0 ATP synthase subunit C 11
Spectrin repeat I/LWEQ domain 11
DHS-like NAD/FAD-binding domain NAD(P)-binding Rossmann-fold domains 11
RNI-like WD40 repeat-like 11
Voltage-gated potassium channels NAD(P)-binding Rossmann-fold domains 11
SNARE-like P-loop containing nucleoside triphosphate hydrolases 11
P-loop containing nucleoside triphosphate hydrolases beta-beta-alpha zinc fingers 11
Bet v1-like WD40 repeat-like 11
SAICAR synthase-like Phosphoglycerate mutase-like 11
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 11
BAG domain UBA-like 11
Ubiquitin-like E set domains 11
PH domain-like I/LWEQ domain 11
P-loop containing nucleoside triphosphate hydrolases Tropomyosin 11
P-loop containing nucleoside triphosphate hydrolases E set domains 11
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 11
Transducin (alpha subunit), insertion domain P-loop containing nucleoside triphosphate hydrolases 11
Radical SAM enzymes Acyl-CoA N-acyltransferases (Nat) 11
FAD/NAD(P)-binding domain NAD(P)-binding Rossmann-fold domains 11
Translation initiation factor 2 beta, aIF2beta, N-terminal domain Zinc-binding domain of translation initiation factor 2 beta 11
"Winged helix" DNA-binding domain E set domains 11
Actin-crosslinking proteins RING/U-box 11
Thioredoxin-like Ubiquitin-like 11
Calponin-homology domain, CH-domain HCP-like 11
Ribosomal L27 protein-like Eukaryotic type KH-domain (KH-domain type I) 11
P-loop containing nucleoside triphosphate hydrolases vWA-like 11
RNA-binding domain, RBD alpha/beta knot 11
Glucocorticoid receptor-like (DNA-binding domain) Nucleotide-diphospho-sugar transferases 11
RING/U-box Nucleotidyltransferase 11
Nucleic acid-binding proteins eIF-2-alpha, C-terminal domain 11
Cysteine-rich domain Tropomyosin 11
RNA-binding domain, RBD RING/U-box 11
WD40 repeat-like Actin depolymerizing proteins 11
UBA-like Thioredoxin-like 11
Cysteine proteinases Quinoprotein alcohol dehydrogenase-like 11
Indigoidine synthase A-like Ribokinase-like 11
"Winged helix" DNA-binding domain Ribonuclease H-like 11
DHS-like NAD/FAD-binding domain Formate/glycerate dehydrogenase catalytic domain-like 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 11
PAP/OAS1 substrate-binding domain PAP/Archaeal CCA-adding enzyme, C-terminal domain 11
Glutathione synthetase ATP-binding domain-like Phosphoenolpyruvate/pyruvate domain 11
Chaperone J-domain Homeodomain-like 11
Quinoprotein alcohol dehydrogenase-like Protein kinase-like (PK-like) 11
RCC1/BLIP-II DBL homology domain (DH-domain) 11
N-terminal domain of adenylylcyclase associated protein, CAP C-terminal domain of adenylylcyclase associated protein 11
RING/U-box Cysteine proteinases 11
ADC-like Actin-like ATPase domain 11
Growth factor receptor domain Ribosomal protein S2 11
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 11
Second domain of FERM I/LWEQ domain 11
Glucocorticoid receptor-like (DNA-binding domain) PH domain-like 11
L domain-like Pre-protein crosslinking domain of SecA 11
POZ domain Bromodomain 11
Nucleic acid-binding proteins eIF2alpha middle domain-like 11
Acyl-CoA N-acyltransferases (Nat) Acyl-CoA N-acyltransferases (Nat) 11
WD40 repeat-like VHP, Villin headpiece domain 11
Nucleotide-diphospho-sugar transferases ARM repeat 11
BEACH domain Quinoprotein alcohol dehydrogenase-like 11
Concanavalin A-like lectins/glucanases P-domain of calnexin/calreticulin 11
Galactose-binding domain-like beta-Galactosidase/glucuronidase domain 11
BEACH domain BEACH domain 11
Nucleotidyltransferase PAP/Archaeal CCA-adding enzyme, C-terminal domain 11
NAD(P)-binding Rossmann-fold domains Glutathione synthetase ATP-binding domain-like 11
Glucocorticoid receptor-like (DNA-binding domain) Domain of poly(ADP-ribose) polymerase 11
Thiamin pyrophosphokinase, catalytic domain Thiamin pyrophosphokinase, substrate-binding domain 11
TPR-like "Winged helix" DNA-binding domain 11
Calponin-homology domain, CH-domain Tropomyosin 11
Putative DNA-binding domain Putative DNA-binding domain 11
RING/U-box Calcium-dependent phosphotriesterase 11
Eukaryotic type KH-domain (KH-domain type I) LigT-like 11
FYSH domain EF-G C-terminal domain-like 11
Class II aaRS ABD-related C-terminal domain of ProRS 11
Nucleotide-binding domain 4Fe-4S ferredoxins 11
Aldolase post-HMGL domain-like 11
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 11
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 11
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 11
Voltage-gated potassium channels TrkA C-terminal domain-like 11
WWE domain WWE domain 11
MIT domain P-loop containing nucleoside triphosphate hydrolases 11
ClpP/crotonase ClpP/crotonase 11
HAND domain of the nucleosome remodeling ATPase ISWI Homeodomain-like 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleotidylyl transferase 11
C2 domain (Calcium/lipid-binding domain, CaLB) Calpain large subunit, middle domain (domain III) 11
mRNA decapping enzyme DcpS N-terminal domain HIT-like 11
FYSH domain Hypothetical protein AF0491, middle domain 11
ARM repeat Histone-fold 11
Initiation factor IF2/eIF5b, domain 3 Translation proteins 11
GTPase activation domain, GAP Cysteine-rich domain 11
E set domains Glycosyl hydrolase domain 11
N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 Translational machinery components 11
BRCT domain DNA/RNA polymerases 11
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
WGR domain-like Domain of poly(ADP-ribose) polymerase 11
ENTH/VHS domain Spectrin repeat 11
Cyclophilin-like RNA-binding domain, RBD 11
CCCH zinc finger RNA-binding domain, RBD 11
RNA-binding domain, RBD Surp module (SWAP domain) 11
CYTH-like phosphatases Nucleic acid-binding proteins 11
PUA domain-like Nucleotidylyl transferase 11
Domain of the SRP/SRP receptor G-proteins Signal peptide-binding domain 11
Class II aaRS and biotin synthetases C-terminal domain of ProRS 11
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 11
vWA-like SPOC domain-like 11
Domain of poly(ADP-ribose) polymerase ADP-ribosylation 11
Origin of replication-binding domain, RBD-like P-loop containing nucleoside triphosphate hydrolases 11
DPP6 N-terminal domain-like alpha/beta-Hydrolases 11
C2 domain (Calcium/lipid-binding domain, CaLB) EF-hand 11
"Winged helix" DNA-binding domain Protein kinase-like (PK-like) 11
Protein kinase-like (PK-like) Calpain large subunit, middle domain (domain III) 11
RING/U-box PAP/OAS1 substrate-binding domain 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11
POZ domain FYVE/PHD zinc finger 11
Ribosomal L27 protein-like Nucleic acid-binding proteins 11
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 11
Actin-like ATPase domain ARM repeat 11
L domain-like SH2 domain 11
tRNA-binding arm Class II aaRS and biotin synthetases 11
Enolase N-terminal domain-like Enolase C-terminal domain-like 11
Protein kinase-like (PK-like) Ypt/Rab-GAP domain of gyp1p 11
Nucleotide-binding domain FMN-linked oxidoreductases 11
RING/U-box TRAF domain-like 11
P-loop containing nucleoside triphosphate hydrolases Glucocorticoid receptor-like (DNA-binding domain) 11
Calponin-homology domain, CH-domain Glucocorticoid receptor-like (DNA-binding domain) 11
DNA clamp DNA clamp 11
Multidrug resistance efflux transporter EmrE MFS general substrate transporter 11
MIT domain MIT domain 11
Periplasmic binding protein-like I Protein kinase-like (PK-like) 11
FYVE/PHD zinc finger FYVE/PHD zinc finger 11
ARM repeat Tropomyosin 11
Regulator of G-protein signaling, RGS DBL homology domain (DH-domain) 11
E set domains Integrin alpha N-terminal domain 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
Protein kinase-like (PK-like) WD40 repeat-like 11
MIT domain Glucocorticoid receptor-like (DNA-binding domain) 11
P-loop containing nucleoside triphosphate hydrolases Actin-like ATPase domain 11
CYTH-like phosphatases DNA ligase/mRNA capping enzyme, catalytic domain 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
Arp2/3 complex subunits Arp2/3 complex subunits 11
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 11
F-box domain NHL repeat 11
SufE/NifU Fe-S cluster assembly (FSCA) domain-like 11
Peptide methionine sulfoxide reductase Mss4-like 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
A DNA-binding domain in eukaryotic transcription factors Leucine zipper domain 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleic acid-binding proteins 11
4Fe-4S ferredoxins P-loop containing nucleoside triphosphate hydrolases 11
Second domain of FERM PH domain-like 11
Clathrin heavy-chain terminal domain ARM repeat 11
Bet v1-like F-box domain 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 11
BRCT domain P-loop containing nucleoside triphosphate hydrolases 11
EF-hand Protein kinase-like (PK-like) 11
Pre-PUA domain PUA domain-like 11
RING/U-box NHL repeat 11
(Trans)glycosidases Apolipoprotein A-I 11
Elongation factor TFIIS domain 2 Zinc beta-ribbon 11
ClpP/crotonase Growth factor receptor domain 11
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 11
Pseudouridine synthase PUA domain-like 11
Translation initiation factor 2 beta, aIF2beta, N-terminal domain ARM repeat 11
TPR-like SET domain 11
RING/U-box ADP-ribosylation 11
THUMP domain-like Histone-fold 11
FAD-linked reductases, C-terminal domain NAD(P)-binding Rossmann-fold domains 11
BAG domain HSP20-like chaperones 11
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 11
P-loop containing nucleoside triphosphate hydrolases SH3-domain 11
NagB/RpiA/CoA transferase-like LmbE-like 11
NAD(P)-binding Rossmann-fold domains CPE0013-like 11
3-carboxy-cis,cis-mucoante lactonizing enzyme WD40 repeat-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 11
ACT-like HAD-like 11
BAG domain Thioredoxin-like 11
Macro domain-like DHS-like NAD/FAD-binding domain 11
GTPase activation domain, GAP Glucocorticoid receptor-like (DNA-binding domain) 11
Ras GEF S13-like H2TH domain 11
PH domain-like Actin depolymerizing proteins 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
"Winged helix" DNA-binding domain RNA-binding domain, RBD 11
MFS general substrate transporter MFS general substrate transporter 11
PH domain-like Oxysterol-binding protein-like 11
GroEL-intermediate domain like GroEL-intermediate domain like 11
P-loop containing nucleoside triphosphate hydrolases PH domain-like 11
Cysteine proteinases SNARE fusion complex 11
L domain-like Concanavalin A-like lectins/glucanases 11
Restriction endonuclease-like RuvA domain 2-like 11
beta-Galactosidase/glucuronidase domain (Trans)glycosidases 11
B-box zinc-binding domain Calcium-dependent phosphotriesterase 11
Cysteine proteinases UBA-like 11
t-snare proteins SNARE fusion complex 11
Cdc48 domain 2-like Actin-like ATPase domain 11
ARM repeat Concanavalin A-like lectins/glucanases 11
WD40 repeat-like Galactose oxidase, central domain 11
Growth factor receptor domain PapD-like 11
CCCH zinc finger ARM repeat 11
ClpP/crotonase Aldolase 11
ARM repeat P-loop containing nucleoside triphosphate hydrolases 11
DUSP-like Cysteine proteinases 11
Aldolase Single hybrid motif 11
Nucleic acid-binding proteins TPR-like 11
PH domain-like VHP, Villin headpiece domain 11
DNase I-like DNase I-like 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Nucleic acid-binding proteins 11
Ubiquitin-like Cysteine proteinases 11
Tropomyosin Formin homology 2 domain (FH2 domain) 11
PRP4-like WD40 repeat-like 11
Growth factor receptor domain Multiheme cytochromes 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Sm-like ribonucleoproteins 11
FMN-linked oxidoreductases 4Fe-4S ferredoxins 11
Chaperone J-domain L domain-like 11
Nucleotide-diphospho-sugar transferases Guanosine diphospho-D-mannose pyrophosphorylase/mannose-6-phosphate isomerase linker domain 11
ARM repeat Hect, E3 ligase catalytic domain 11
Retrovirus zinc finger-like domains RING/U-box 11
Glucocorticoid receptor-like (DNA-binding domain) WGR domain-like 11
Cysteine proteinases Protein kinase-like (PK-like) 11
Actin depolymerizing proteins SH3-domain 11
Chaperone J-domain beta-beta-alpha zinc fingers 11
WD40 repeat-like Bromodomain 11
Actin-like ATPase domain TPR-like 11
RING/U-box DHS-like NAD/FAD-binding domain 11
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 11
Ribonuclease H-like Ribonuclease H-like 11
Prokaryotic type I DNA topoisomerase Multiheme cytochromes 11
2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain Alkaline phosphatase-like 11
DBL homology domain (DH-domain) Ras GEF 11
Ankyrin repeat Bromodomain 11
Bacterial fluorinating enzyme, N-terminal domain Bacterial fluorinating enzyme, C-terminal domain 11
BRCT domain post-AAA+ oligomerization domain-like 11
ThrRS/AlaRS common domain Class II aaRS and biotin synthetases 11
Succinyl-CoA synthetase domains Succinyl-CoA synthetase domains 11
GTPase activation domain, GAP S13-like H2TH domain 11
P-loop containing nucleoside triphosphate hydrolases HAND domain of the nucleosome remodeling ATPase ISWI 11
UBC-like Ribosomal protein S5 domain 2-like 11
Concanavalin A-like lectins/glucanases RING/U-box 11
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 11
Actin-like ATPase domain MFS general substrate transporter 11
RING/U-box TPR-like 11
Succinyl-CoA synthetase domains Glutathione synthetase ATP-binding domain-like 11
WGR domain-like ADP-ribosylation 11

Jump to [ Top of page · Add/remove domain pairs · Add/remove genomes · Domain combination pairs ]