SUPERFAMILY 1.75 HMM library and genome assignments server

Domain combination pairs in Entamoeba dispar 1.2

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

  • For a list of unique full length architectures for this genome click here (can be slow).
Adjacent domain pairs graph

Graph of adjacent domain pairs.


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Domain combination pairs

611 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
Growth factor receptor domain Growth factor receptor domain 9048
L domain-like L domain-like 8521
Actin-like ATPase domain Actin-like ATPase domain 7412
Growth factor receptor domain Protein kinase-like (PK-like) 7031
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 6325
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 429
Ypt/Rab-GAP domain of gyp1p Ypt/Rab-GAP domain of gyp1p 346
DBL homology domain (DH-domain) PH domain-like 3117
RNA-binding domain, RBD RNA-binding domain, RBD 2514
Protein kinase-like (PK-like) PH domain-like 2511
ARM repeat ARM repeat 2414
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 209
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 173
BAR/IMD domain-like SH3-domain 172
HAD-like Calcium ATPase, transmembrane domain M 163
Metal cation-transporting ATPase, ATP-binding domain N HAD-like 152
Metal cation-transporting ATPase, ATP-binding domain N Calcium ATPase, transmembrane domain M 152
TPR-like TPR-like 155
Protein kinase-like (PK-like) Protein kinase-like (PK-like) 156
Calcium ATPase, transduction domain A HAD-like 152
ARM repeat Protein kinase-like (PK-like) 1510
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 143
Calcium ATPase, transduction domain A Metal cation-transporting ATPase, ATP-binding domain N 141
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 133
RING/U-box RING/U-box 137
P-loop containing nucleoside triphosphate hydrolases Translation proteins 137
ABC transporter transmembrane region ABC transporter transmembrane region 135
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 123
GroEL-intermediate domain like GroEL apical domain-like 122
DBL homology domain (DH-domain) FYVE/PHD zinc finger 125
GroEL equatorial domain-like GroEL apical domain-like 122
GroEL equatorial domain-like GroEL-intermediate domain like 122
SMAD/FHA domain Protein kinase-like (PK-like) 122
Cullin homology domain "Winged helix" DNA-binding domain 113
PH domain-like FYVE/PHD zinc finger 114
L domain-like PP2C-like 105
Cyclin-like Cyclin-like 105
(Phosphotyrosine protein) phosphatases II L domain-like 105
C2 domain (Calcium/lipid-binding domain, CaLB) Protein kinase-like (PK-like) 104
Ribonuclease H-like DNA/RNA polymerases 92
Nucleic acid-binding proteins Nucleic acid-binding proteins 96
GTPase activation domain, GAP PH domain-like 97
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 93
EF-hand EF-hand 95
Ankyrin repeat FabD/lysophospholipase-like 92
ARM repeat Clathrin adaptor appendage domain 84
(Phosphotyrosine protein) phosphatases II Protein kinase-like (PK-like) 85
Thioredoxin-like Thioredoxin-like 87
C2 domain (Calcium/lipid-binding domain, CaLB) ARM repeat 83
PH domain-like PH domain-like 88
WD40 repeat-like WD40 repeat-like 87
L domain-like Protein kinase-like (PK-like) 85
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 85
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 84
Chaperone J-domain HSP40/DnaJ peptide-binding domain 74
Zn-finger domain of Sec23/24 vWA-like 76
Nucleotidyltransferase PAP/OAS1 substrate-binding domain 74
PH domain-like ArfGap/RecO-like zinc finger 76
ARM repeat Formin homology 2 domain (FH2 domain) 73
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 72
Cullin repeat-like Cullin homology domain 72
beta-sandwich domain of Sec23/24 Zn-finger domain of Sec23/24 76
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 72
Translation proteins SH3-like domain Nucleic acid-binding proteins 72
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 74
Cysteine-rich domain NAD kinase/diacylglycerol kinase-like 65
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 63
Metallo-hydrolase/oxidoreductase SCP-like 62
SH3-domain SH3-domain 65
Cysteine-rich domain Cysteine-rich domain 65
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 64
Calponin-homology domain, CH-domain DBL homology domain (DH-domain) 65
Concanavalin A-like lectins/glucanases BEACH domain 63
beta-sandwich domain of Sec23/24 vWA-like 65
PH domain-like Calponin-homology domain, CH-domain 65
PH domain-like (Phosphotyrosine protein) phosphatases II 63
SNARE-like Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor 62
F-box domain WD40 repeat-like 61
E set domains E set domains 66
(Trans)glycosidases Glycosyl hydrolase domain 64
Ankyrin repeat Protein kinase-like (PK-like) 63
Ankyrin repeat Ypt/Rab-GAP domain of gyp1p 63
Glucocorticoid receptor-like (DNA-binding domain) Glucocorticoid receptor-like (DNA-binding domain) 65
Actin depolymerizing proteins VHP, Villin headpiece domain 65
Cullin repeat-like "Winged helix" DNA-binding domain 61
EF-G C-terminal domain-like Ribosomal protein S5 domain 2-like 65
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 51
RNA-binding domain, RBD Retrovirus zinc finger-like domains 54
Thiolase-like Thiolase-like 51
Sec7 domain ARM repeat 55
RNI-like RNI-like 54
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 52
ARM repeat DBL homology domain (DH-domain) 54
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 54
WD40 repeat-like Cysteine-rich domain 53
PH domain-like BEACH domain 53
beta-beta-alpha zinc fingers beta-beta-alpha zinc fingers 54
DBL homology domain (DH-domain) ArfGap/RecO-like zinc finger 54
Metallo-hydrolase/oxidoreductase Flavoproteins 52
Actin depolymerizing proteins Actin depolymerizing proteins 54
BEACH domain WD40 repeat-like 53
Calponin-homology domain, CH-domain ArfGap/RecO-like zinc finger 54
POZ domain Skp1 dimerisation domain-like 52
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 54
SNARE-like SNARE fusion complex 52
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 52
Ankyrin repeat Rap/Ran-GAP 42
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 43
E set domains Protein kinase-like (PK-like) 42
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 43
Homeodomain-like Homeodomain-like 44
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 43
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 41
Translation proteins Ribosomal protein S5 domain 2-like 43
DBL homology domain (DH-domain) GTPase activation domain, GAP 44
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein S5 domain 2-like 43
Class II aaRS and biotin synthetases Class II aaRS ABD-related 44
beta-sandwich domain of Sec23/24 Helical domain of Sec23/24 43
Translation proteins EF-G C-terminal domain-like 43
EF-hand P-loop containing nucleoside triphosphate hydrolases 43
Pre-PUA domain PUA domain-like 41
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 43
Ubiquitin-like UBA-like 43
C2 domain (Calcium/lipid-binding domain, CaLB) C2 domain (Calcium/lipid-binding domain, CaLB) 42
Protein kinase-like (PK-like) SH2 domain 42
FKBP-like TPR-like 43
ACP-like NAD(P)-binding Rossmann-fold domains 43
Zn-finger domain of Sec23/24 Helical domain of Sec23/24 43
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 42
Acetyl-CoA synthetase-like NAD(P)-binding Rossmann-fold domains 43
PH domain-like L domain-like 43
Chromo domain-like P-loop containing nucleoside triphosphate hydrolases 43
vWA-like Helical domain of Sec23/24 43
Acetyl-CoA synthetase-like ACP-like 43
WD40 repeat-like PH domain-like 43
BRCT domain BRCT domain 43
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 42
Concanavalin A-like lectins/glucanases WD40 repeat-like 42
EF-G C-terminal domain-like EF-G C-terminal domain-like 43
Clathrin adaptor appendage domain Subdomain of clathrin and coatomer appendage domain 43
GTPase activation domain, GAP Cysteine-rich domain 31
CCCH zinc finger CCCH zinc finger 33
GTPase activation domain, GAP RNI-like 32
Pectin lyase-like Pectin lyase-like 32
Barwin-like endoglucanases Galactose-binding domain-like 33
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 31
PapD-like Protein kinase-like (PK-like) 32
Helical domain of Sec23/24 C-terminal, gelsolin-like domain of Sec23/24 32
TPR-like SET domain 31
Galactose mutarotase-like (Trans)glycosidases 31
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 32
Ubiquitin-like Protein kinase-like (PK-like) 31
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 32
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 32
Zn-finger domain of Sec23/24 C-terminal, gelsolin-like domain of Sec23/24 32
PriA/YqbF domain GINS helical bundle-like 32
Barwin-like endoglucanases PHL pollen allergen 33
PAZ domain Ribonuclease H-like 32
RNI-like L domain-like 33
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 32
L domain-like NTF2-like 33
ArfGap/RecO-like zinc finger Ankyrin repeat 33
TATA-box binding protein-like TATA-box binding protein-like 32
BAG domain HSP20-like chaperones 32
GroES-like NAD(P)-binding Rossmann-fold domains 31
P-loop containing nucleoside triphosphate hydrolases L domain-like 33
Ankyrin repeat Ankyrin repeat 33
WW domain C2 domain (Calcium/lipid-binding domain, CaLB) 32
DHS-like NAD/FAD-binding domain Formate/glycerate dehydrogenase catalytic domain-like 33
(Phosphotyrosine protein) phosphatases II C2 domain (Calcium/lipid-binding domain, CaLB) 31
RCC1/BLIP-II Ras GEF 32
P-loop containing nucleoside triphosphate hydrolases Sec63 N-terminal domain-like 33
S-adenosyl-L-methionine-dependent methyltransferases S-adenosyl-L-methionine-dependent methyltransferases 32
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 32
Ubiquitin-like ARM repeat 31
P-loop containing nucleoside triphosphate hydrolases Smc hinge domain 33
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 32
GTPase activation domain, GAP WD40 repeat-like 31
RING/U-box UBA-like 33
Outer arm dynein light chain 1 (Phosphotyrosine protein) phosphatases II 31
Galactose mutarotase-like Glycosyl hydrolase domain 31
P-loop containing nucleoside triphosphate hydrolases TGS-like 31
ADC-like P-loop containing nucleoside triphosphate hydrolases 31
Ras GEF GTPase activation domain, GAP 32
Sec63 N-terminal domain-like E set domains 33
ARM repeat Rap/Ran-GAP 33
Cdc48 domain 2-like P-loop containing nucleoside triphosphate hydrolases 31
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 33
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 32
beta-N-acetylhexosaminidase-like domain (Trans)glycosidases 32
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 31
Phospholipase D/nuclease Phospholipase D/nuclease 31
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 32
Ypt/Rab-GAP domain of gyp1p Rhodanese/Cell cycle control phosphatase 31
ADC-like Cdc48 domain 2-like 31
Mib/herc2 domain-like Mib/herc2 domain-like 31
beta-sandwich domain of Sec23/24 C-terminal, gelsolin-like domain of Sec23/24 32
vWA-like C-terminal, gelsolin-like domain of Sec23/24 32
Thioredoxin-like ERP29 C domain-like 33
HCP-like HCP-like 33
Calponin-homology domain, CH-domain EF-hand 33
ARM repeat WD40 repeat-like 32
4Fe-4S ferredoxins Fe-only hydrogenase 32
Retrovirus zinc finger-like domains Retrovirus zinc finger-like domains 33
Ubiquitin-like C2 domain (Calcium/lipid-binding domain, CaLB) 31
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 32
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 32
Quinoprotein alcohol dehydrogenase-like WD40 repeat-like 33
Ribosomal protein L6 Ribosomal protein L6 31
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 22
Ribosomal L27 protein-like Nucleic acid-binding proteins 22
PH domain-like I/LWEQ domain 21
alpha-helical ferredoxin Nucleotide-binding domain 22
WWE domain BRCT domain 22
Tropomyosin Myosin rod fragments 22
Cyclophilin-like RNA-binding domain, RBD 22
DHS-like NAD/FAD-binding domain NAD(P)-binding Rossmann-fold domains 22
C2 domain (Calcium/lipid-binding domain, CaLB) Rap/Ran-GAP 22
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 22
Activating enzymes of the ubiquitin-like proteins Activating enzymes of the ubiquitin-like proteins 21
L domain-like WD40 repeat-like 21
Calponin-homology domain, CH-domain E set domains 22
Second domain of FERM PH domain-like 21
PH domain-like SH3-domain 22
Nucleotidylyl transferase Nucleotidylyl transferase 21
WGR domain-like ADP-ribosylation 22
E set domains C2 domain (Calcium/lipid-binding domain, CaLB) 21
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 22
L domain-like VHP, Villin headpiece domain 21
Metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 22
WGR domain-like Domain of poly(ADP-ribose) polymerase 22
PX domain Protein kinase-like (PK-like) 21
Homo-oligomeric flavin-containing Cys decarboxylases, HFCD CoaB-like 21
Translation initiation factor 2 beta, aIF2beta, N-terminal domain Zinc-binding domain of translation initiation factor 2 beta 22
RCC1/BLIP-II DBL homology domain (DH-domain) 21
4Fe-4S ferredoxins P-loop containing nucleoside triphosphate hydrolases 22
PHL pollen allergen Galactose-binding domain-like 22
ARM repeat FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) 22
PH domain-like Ankyrin repeat 22
Kelch motif Protein kinase-like (PK-like) 21
Second domain of FERM I/LWEQ domain 21
Calpain large subunit, middle domain (domain III) Calpain large subunit, middle domain (domain III) 22
Clc chloride channel CBS-domain pair 21
Concanavalin A-like lectins/glucanases PH domain-like 21
PLP-dependent transferases PLP-dependent transferases 21
DPP6 N-terminal domain-like alpha/beta-Hydrolases 21
Protein kinase-like (PK-like) SH3-domain 22
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase HSP90 C-terminal domain 21
TPR-like Metallo-dependent phosphatases 21
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 22
Calponin-homology domain, CH-domain Spectrin repeat 22
Chromo domain-like Chromo domain-like 21
Translational machinery components L30e-like 22
Aminopeptidase/glucanase lid domain Zn-dependent exopeptidases 21
"Winged helix" DNA-binding domain RNA-binding domain, RBD 21
DBL homology domain (DH-domain) Ras GEF 21
Staphylococcal nuclease Staphylococcal nuclease 22
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 21
Glucocorticoid receptor-like (DNA-binding domain) ADP-ribosylation 22
PRTase-like PRTase-like 21
ENTH/VHS domain I/LWEQ domain 22
Starch-binding domain-like (Trans)glycosidases 22
alpha/beta-Hydrolases SAM/Pointed domain 22
Ricin B-like lectins RPA2825-like 21
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 22
Nucleotidylyl transferase Ribosomal protein L25-like 22
L domain-like Outer arm dynein light chain 1 21
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 21
E set domains WW domain 21
DNase I-like GTPase activation domain, GAP 22
Spectrin repeat EF-hand 22
Glucocorticoid receptor-like (DNA-binding domain) WGR domain-like 22
Galactose-binding domain-like (Trans)glycosidases 22
RING/U-box Cysteine proteinases 22
FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) Protein kinase-like (PK-like) 22
Metallo-dependent hydrolases Metallo-dependent hydrolases 21
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 22
FYSH domain Hypothetical protein AF0491, middle domain 22
PX domain PH domain-like 21
Domain of poly(ADP-ribose) polymerase ADP-ribosylation 22
Glucocorticoid receptor-like (DNA-binding domain) Domain of poly(ADP-ribose) polymerase 22
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 22
Glutathione synthetase ATP-binding domain-like Phosphoenolpyruvate/pyruvate domain 22
Concanavalin A-like lectins/glucanases P-domain of calnexin/calreticulin 21
GTPase activation domain, GAP Ankyrin repeat 22
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 22
UBA-like UBA-like 22
Putative DNA-binding domain Class II aaRS and biotin synthetases 22
N-terminal, heterodimerisation domain of RBP7 (RpoE) Nucleic acid-binding proteins 21
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 21
Zinc beta-ribbon Cyclin-like 22
Dcp2 domain-like Nudix 21
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 22
L domain-like Actin depolymerizing proteins 21
Ribonuclease H-like HRDC-like 22
ARM repeat PH domain-like 22
Nucleic acid-binding proteins Eukaryotic type KH-domain (KH-domain type I) 22
"Winged helix" DNA-binding domain Sec63 N-terminal domain-like 22
F-box domain RNI-like 22
ARM repeat HIT/MYND zinc finger-like 22
Sec7 domain HIT/MYND zinc finger-like 22
ThrRS/AlaRS common domain Class II aaRS and biotin synthetases 22
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 22
Calponin-homology domain, CH-domain Glucocorticoid receptor-like (DNA-binding domain) 21
ARM repeat Chaperone J-domain 22
Rad51 N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 22
Ubiquitin-like E set domains 21
DBL homology domain (DH-domain) DBL homology domain (DH-domain) 22
Creatinase/aminopeptidase "Winged helix" DNA-binding domain 22
Ribosomal protein S5 domain 2-like HSP90 C-terminal domain 21
Nucleotidyltransferase Poly A polymerase C-terminal region-like 21
vWA-like Cysteine-rich domain 11
Second domain of FERM RNI-like 11
FYVE/PHD zinc finger FYVE/PHD zinc finger 11
POZ domain Bromodomain 11
Rhomboid-like UBA-like 11
E set domains (Trans)glycosidases 11
FYSH domain EF-G C-terminal domain-like 11
Actin depolymerizing proteins SH3-domain 11
Succinyl-CoA synthetase domains Glutathione synthetase ATP-binding domain-like 11
WD40 repeat-like RNA-binding domain, RBD 11
RING/U-box B-box zinc-binding domain 11
mRNA decapping enzyme DcpS N-terminal domain HIT-like 11
BAR/IMD domain-like GTPase activation domain, GAP 11
F-box domain L domain-like 11
Translation initiation factor 2 beta, aIF2beta, N-terminal domain ARM repeat 11
GTPase activation domain, GAP (Phosphotyrosine protein) phosphatases II 11
RNA-binding domain, RBD Surp module (SWAP domain) 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
DUSP-like Cysteine proteinases 11
Nucleotide-diphospho-sugar transferases Guanosine diphospho-D-mannose pyrophosphorylase/mannose-6-phosphate isomerase linker domain 11
Sec63 N-terminal domain-like Sec63 N-terminal domain-like 11
NTF2-like UBA-like 11
SNARE-like P-loop containing nucleoside triphosphate hydrolases 11
Staphylococcal nuclease Tudor/PWWP/MBT 11
WD40 repeat-like Actin depolymerizing proteins 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Nucleic acid-binding proteins 11
Quinoprotein alcohol dehydrogenase-like Integrin alpha N-terminal domain 11
DPP6 N-terminal domain-like WD40 repeat-like 11
vWA-like SPOC domain-like 11
Hypothetical protein AF0491, middle domain EF-G C-terminal domain-like 11
UBA-like Thioredoxin-like 11
PapD-like GTPase activation domain, GAP 11
Class II aaRS and biotin synthetases Translation proteins 11
N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 L30e-like 11
Calponin-homology domain, CH-domain HCP-like 11
Thiamin pyrophosphokinase, catalytic domain Thiamin pyrophosphokinase, substrate-binding domain 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
B-box zinc-binding domain YWTD domain 11
3-carboxy-cis,cis-mucoante lactonizing enzyme Protein kinase-like (PK-like) 11
BAR/IMD domain-like ArfGap/RecO-like zinc finger 11
GTPase activation domain, GAP L domain-like 11
Ribosomal L27 protein-like Eukaryotic type KH-domain (KH-domain type I) 11
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 11
SufE/NifU Fe-S cluster assembly (FSCA) domain-like 11
FAD/NAD(P)-binding domain CPE0013-like 11
Protein kinase-like (PK-like) WD40 repeat-like 11
HAD-like P-loop containing nucleoside triphosphate hydrolases 11
E set domains Quinoprotein alcohol dehydrogenase-like 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 11
Cytidine deaminase-like Cytidine deaminase-like 11
Concanavalin A-like lectins/glucanases Protein kinase-like (PK-like) 11
GINS helical bundle-like Acid phosphatase/Vanadium-dependent haloperoxidase 11
Protein kinase-like (PK-like) HCP-like 11
2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain Alkaline phosphatase-like 11
WD40 repeat-like VHP, Villin headpiece domain 11
Dom34/Pelota N-terminal domain-like Translational machinery components 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
Chaperone J-domain Homeodomain-like 11
Nucleic acid-binding proteins eIF-2-alpha, C-terminal domain 11
(Trans)glycosidases Six-hairpin glycosidases 11
Ubiquitin-like XPC-binding domain 11
L domain-like EF-hand 11
Calponin-homology domain, CH-domain Myosin rod fragments 11
Putative DNA-binding domain Putative DNA-binding domain 11
Roadblock/LC7 domain Glycerol-3-phosphate (1)-acyltransferase 11
Restriction endonuclease-like RuvA domain 2-like 11
Lipovitellin-phosvitin complex, superhelical domain Sec7 domain 11
Ribonuclease H-like Ribonuclease H-like 11
RNI-like Protein kinase-like (PK-like) 11
GTPase activation domain, GAP RGC domain-like 11
Tricorn protease domain 2 WD40 repeat-like 11
Nucleic acid-binding proteins S-adenosyl-L-methionine-dependent methyltransferases 11
Nucleotide-binding domain 4Fe-4S ferredoxins 11
Macro domain-like DHS-like NAD/FAD-binding domain 11
Protein kinase-like (PK-like) Calcium ATPase, transmembrane domain M 11
P-loop containing nucleoside triphosphate hydrolases Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain 11
Dom34/Pelota N-terminal domain-like L30e-like 11
4Fe-4S ferredoxins FMN-dependent nitroreductase-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 11
Actin-like ATPase domain TPR-like 11
Protein kinase-like (PK-like) Ypt/Rab-GAP domain of gyp1p 11
Indigoidine synthase A-like Ribokinase-like 11
TK C-terminal domain-like Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 11
FYVE/PHD zinc finger E set domains 11
L domain-like UBA-like 11
FF domain FF domain 11
(Trans)glycosidases (Trans)glycosidases 11
alpha-helical ferredoxin 4Fe-4S ferredoxins 11
TPR-like "Winged helix" DNA-binding domain 11
BEACH domain Quinoprotein alcohol dehydrogenase-like 11
Protein kinase-like (PK-like) P-loop containing nucleoside triphosphate hydrolases 11
UBC-like Ribosomal protein S5 domain 2-like 11
ClpP/crotonase Single hybrid motif 11
UBC-like ADP-ribosylation 11
Nucleotide-diphospho-sugar transferases FKBP-like 11
Metallo-hydrolase/oxidoreductase Metallo-hydrolase/oxidoreductase 11
FMN-linked oxidoreductases 4Fe-4S ferredoxins 11
RING/U-box Homeodomain-like 11
Chromo domain-like Acyl-CoA N-acyltransferases (Nat) 11
Thiamin diphosphate-binding fold (THDP-binding) Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleotidylyl transferase 11
F1F0 ATP synthase subunit C F1F0 ATP synthase subunit C 11
"Winged helix" DNA-binding domain Protein kinase-like (PK-like) 11
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 11
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 11
Eukaryotic RPB5 N-terminal domain RPB5-like RNA polymerase subunit 11
Bet v1-like WD40 repeat-like 11
Trimeric LpxA-like enzymes FumA C-terminal domain-like 11
ThrRS/AlaRS common domain P-loop containing nucleoside triphosphate hydrolases 11
NAD(P)-binding Rossmann-fold domains Glutathione synthetase ATP-binding domain-like 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 11
Sm-like ribonucleoproteins Ribosomal protein L30p/L7e 11
DNase I-like PapD-like 11
RING/U-box ADP-ribosylation 11
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 11
Regulator of G-protein signaling, RGS DBL homology domain (DH-domain) 11
Zinc-binding domain of translation initiation factor 2 beta ARM repeat 11
ARM repeat Rhodanese/Cell cycle control phosphatase 11
N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 Translational machinery components 11
P-loop containing nucleoside triphosphate hydrolases SH3-domain 11
Sec1/munc18-like (SM) proteins Sec1/munc18-like (SM) proteins 11
DNA clamp DNA clamp 11
Nucleic acid-binding proteins TPR-like 11
P-loop containing nucleoside triphosphate hydrolases E set domains 11
Class II aaRS and biotin synthetases C-terminal domain of ProRS 11
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 11
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 11
Nudix Nudix 11
Chaperone J-domain Sec63 N-terminal domain-like 11
Galactose-binding domain-like beta-Galactosidase/glucuronidase domain 11
Class I glutamine amidotransferase-like Class I glutamine amidotransferase-like 11
RNA-binding domain, RBD PABC (PABP) domain 11
SNARE-like Domain of the SRP/SRP receptor G-proteins 11
WD40 repeat-like Bromodomain 11
NSFL1 (p97 ATPase) cofactor p47, SEP domain Ubiquitin-like 11
CCCH zinc finger RNA-binding domain, RBD 11
RING/U-box NHL repeat 11
C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase RNA-binding domain, RBD 11
Leukotriene A4 hydrolase N-terminal domain Metalloproteases ("zincins"), catalytic domain 11
WD40 repeat-like TolB, C-terminal domain 11
Histone-fold ARM repeat 11
Bacterial fluorinating enzyme, N-terminal domain Bacterial fluorinating enzyme, C-terminal domain 11
post-HMGL domain-like Single hybrid motif 11
Pyruvate-ferredoxin oxidoreductase, PFOR, domain III alpha-helical ferredoxin 11
Nucleotide-diphospho-sugar transferases TPR-like 11
PLP-binding barrel Alanine racemase C-terminal domain-like 11
WD40 repeat-like RING/U-box 11
Tropomyosin Tropomyosin 11
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
Porins Porins 11
MIT domain P-loop containing nucleoside triphosphate hydrolases 11
Nucleic acid-binding proteins eIF2alpha middle domain-like 11
Transducin (alpha subunit), insertion domain P-loop containing nucleoside triphosphate hydrolases 11
Agglutinin HPA-like Ankyrin repeat 11
Eukaryotic type KH-domain (KH-domain type I) LigT-like 11
E set domains Glycosyl hydrolase domain 11
P-loop containing nucleoside triphosphate hydrolases vWA-like 11
UBA-like XPC-binding domain 11
Pseudouridine synthase PUA domain-like 11
Ferritin-like Rubredoxin-like 11
ClpP/crotonase post-HMGL domain-like 11
Domain of the SRP/SRP receptor G-proteins Signal peptide-binding domain 11
CCCH zinc finger ARM repeat 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11
PLP-dependent transferases Ornithine decarboxylase C-terminal domain 11
(Trans)glycosidases Beta-D-glucan exohydrolase, C-terminal domain 11
beta-Galactosidase/glucuronidase domain (Trans)glycosidases 11
(Phosphotyrosine protein) phosphatases II RNI-like 11
EPT/RTPC-like EPT/RTPC-like 11
ATP-dependent DNA ligase DNA-binding domain Nucleic acid-binding proteins 11
Myosin rod fragments Myosin rod fragments 11
Ubiquitin-like Ubiquitin-like 11
(Phosphotyrosine protein) phosphatases II Actin depolymerizing proteins 11
Radical SAM enzymes Acyl-CoA N-acyltransferases (Nat) 11
EF-hand Protein kinase-like (PK-like) 11
P-loop containing nucleoside triphosphate hydrolases Glucocorticoid receptor-like (DNA-binding domain) 11
Starch-binding domain-like Starch-binding domain-like 11
ClpP/crotonase Aldolase 11
Cysteine proteinases Growth factor receptor domain 11
Enolase N-terminal domain-like WD40 repeat-like 11
RNA-binding domain, RBD alpha/beta knot 11
Thioredoxin-like Ubiquitin-like 11
NagB/RpiA/CoA transferase-like LmbE-like 11
DBL homology domain (DH-domain) Glucocorticoid receptor-like (DNA-binding domain) 11
CCCH zinc finger RING/U-box 11
SAICAR synthase-like Phosphoglycerate mutase-like 11
(Trans)glycosidases Chitinase insertion domain 11
Protein kinase-like (PK-like) Polo-box domain 11
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 11
Succinyl-CoA synthetase domains Succinyl-CoA synthetase domains 11
Chaperone J-domain E set domains 11
Double-stranded DNA-binding domain WD40 repeat-like 11
Agglutinin HPA-like Rap/Ran-GAP 11
Protein kinase-like (PK-like) Enolase N-terminal domain-like 11
MIT domain MIT domain 11
RING/U-box F-box domain 11
Ras GEF Ankyrin repeat 11
"Winged helix" DNA-binding domain E set domains 11
SAICAR synthase-like SAICAR synthase-like 11
Concanavalin A-like lectins/glucanases RING/U-box 11
P-loop containing nucleoside triphosphate hydrolases PH domain-like 11
ENTH/VHS domain RNA-binding domain, RBD 11
UDP-Glycosyltransferase/glycogen phosphorylase UDP-Glycosyltransferase/glycogen phosphorylase 11
Elongation factor TFIIS domain 2 Zinc beta-ribbon 11
Nucleotide-binding domain FMN-linked oxidoreductases 11
ENTH/VHS domain Methyl-accepting chemotaxis protein (MCP) signaling domain 11
GTPase activation domain, GAP Glucocorticoid receptor-like (DNA-binding domain) 11
Calponin-homology domain, CH-domain VHP, Villin headpiece domain 11
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 11
PH domain-like Oxysterol-binding protein-like 11
WD40 repeat-like BRCT domain 11
Invasin/intimin cell-adhesion fragments Invasin/intimin cell-adhesion fragments 11
C2 domain (Calcium/lipid-binding domain, CaLB) EF-hand 11
PH domain-like Actin depolymerizing proteins 11
Aldolase Single hybrid motif 11
PAP/OAS1 substrate-binding domain PAP/Archaeal CCA-adding enzyme, C-terminal domain 11
tRNA-binding arm Class II aaRS and biotin synthetases 11
RING/U-box DHS-like NAD/FAD-binding domain 11
ALDH-like Dehydroquinate synthase-like 11
Protein kinase-like (PK-like) Calpain large subunit, middle domain (domain III) 11
P-loop containing nucleoside triphosphate hydrolases Tropomyosin 11
Quinoprotein alcohol dehydrogenase-like Quinoprotein alcohol dehydrogenase-like 11
ARM repeat Subdomain of clathrin and coatomer appendage domain 11
Nucleotide-diphospho-sugar transferases ARM repeat 11
Calponin-homology domain, CH-domain Tropomyosin 11
Quinoprotein alcohol dehydrogenase-like Protein kinase-like (PK-like) 11
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 11
DBL homology domain (DH-domain) VHP, Villin headpiece domain 11
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 11
P-loop containing nucleoside triphosphate hydrolases Myosin rod fragments 11
Nucleotidyltransferase PAP/Archaeal CCA-adding enzyme, C-terminal domain 11
Ankyrin repeat Bromodomain 11
Enolase N-terminal domain-like ARM repeat 11
BAR/IMD domain-like Ankyrin repeat 11
Translation proteins ThrRS/AlaRS common domain 11
Chaperone J-domain beta-beta-alpha zinc fingers 11
EF-hand Ribosomal protein L39e 11
Aldolase post-HMGL domain-like 11
ClpP/crotonase ClpP/crotonase 11
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 11
BRCT domain P-loop containing nucleoside triphosphate hydrolases 11
ARM repeat P-loop containing nucleoside triphosphate hydrolases 11
Initiation factor IF2/eIF5b, domain 3 Translation proteins 11
FMN-dependent nitroreductase-like FMN-dependent nitroreductase-like 11
Arp2/3 complex subunits Arp2/3 complex subunits 11
P-loop containing nucleoside triphosphate hydrolases beta-beta-alpha zinc fingers 11
PUA domain-like Nucleotidylyl transferase 11
Enolase N-terminal domain-like Enolase C-terminal domain-like 11
WD40 repeat-like YVTN repeat-like/Quinoprotein amine dehydrogenase 11
MIT domain Glucocorticoid receptor-like (DNA-binding domain) 11
Class II aaRS ABD-related C-terminal domain of ProRS 11
Periplasmic binding protein-like I Protein kinase-like (PK-like) 11
E set domains Actin-like ATPase domain 11
Nucleotidylyl transferase Nucleic acid-binding proteins 11
CYTH-like phosphatases DNA ligase/mRNA capping enzyme, catalytic domain 11
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 11
GTPase activation domain, GAP Protein kinase-like (PK-like) 11
Thiamin diphosphate-binding fold (THDP-binding) alpha-helical ferredoxin 11
PRP4-like WD40 repeat-like 11
Methyl-accepting chemotaxis protein (MCP) signaling domain I/LWEQ domain 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleic acid-binding proteins 11
Concanavalin A-like lectins/glucanases Concanavalin A-like lectins/glucanases 11
RING/U-box TRAF domain-like 11
FAD-linked reductases, C-terminal domain CPE0013-like 11
ATP-dependent DNA ligase DNA-binding domain DNA ligase/mRNA capping enzyme, catalytic domain 11
Chaperone J-domain L domain-like 11
CRAL/TRIO domain GTPase activation domain, GAP 11
TK C-terminal domain-like alpha-helical ferredoxin 11
RING/U-box YWTD domain 11
ARM repeat RING/U-box 11
P-loop containing nucleoside triphosphate hydrolases HRDC-like 11
eIF2alpha middle domain-like eIF-2-alpha, C-terminal domain 11
eIF4e-like WD40 repeat-like 11
SMAD/FHA domain RING/U-box 11
CYTH-like phosphatases Nucleic acid-binding proteins 11
Acyl-CoA N-acyltransferases (Nat) Acyl-CoA N-acyltransferases (Nat) 11
3-carboxy-cis,cis-mucoante lactonizing enzyme alpha/beta-Hydrolases 11
WWE domain WWE domain 11
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 11
PH domain-like VHP, Villin headpiece domain 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
BRCT domain DNA/RNA polymerases 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
Cysteine proteinases UBA-like 11
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 11
alpha-helical ferredoxin FMN-linked oxidoreductases 11
WW domain ARM repeat 11
SMAD/FHA domain P-loop containing nucleoside triphosphate hydrolases 11
N-terminal domain of adenylylcyclase associated protein, CAP C-terminal domain of adenylylcyclase associated protein 11
Transcription factor IIA (TFIIA), alpha-helical domain Transcription factor IIA (TFIIA), beta-barrel domain 11
Growth factor receptor domain Calcium ATPase, transmembrane domain M 11
BAR/IMD domain-like PH domain-like 11
Clathrin heavy-chain terminal domain ARM repeat 11
Ankyrin repeat SH3-domain 11

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