SUPERFAMILY 1.75 HMM library and genome assignments server

Domain combination pairs in Cucumis sativus v122

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

  • For a list of unique full length architectures for this genome click here (can be slow).
Adjacent domain pairs graph

Graph of adjacent domain pairs.


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Domain combination pairs

1362 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
L domain-like Protein kinase-like (PK-like) 21731
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 18943
RNA-binding domain, RBD RNA-binding domain, RBD 12121
L domain-like L domain-like 8238
TPR-like TPR-like 7424
Actin-like ATPase domain Actin-like ATPase domain 7113
L domain-like RNI-like 6638
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 6412
HAD-like Calcium ATPase, transmembrane domain M 6210
(Trans)glycosidases Galactose-binding domain-like 6113
Calcium ATPase, transduction domain A HAD-like 619
Thioredoxin-like GST C-terminal domain-like 594
P-loop containing nucleoside triphosphate hydrolases L domain-like 5930
DNA/RNA polymerases Ribonuclease H-like 5916
CRAL/TRIO N-terminal domain CRAL/TRIO domain 568
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 558
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 5311
Cyclin-like Cyclin-like 506
RING/U-box ARM repeat 498
ARM repeat ARM repeat 4826
S-adenosyl-L-methionine-dependent methyltransferases S-adenosyl-L-methionine-dependent methyltransferases 485
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 478
Galactose-binding domain-like Galactose-binding domain-like 457
alpha-D-mannose-specific plant lectins Protein kinase-like (PK-like) 445
Cupredoxins Cupredoxins 437
RNI-like Protein kinase-like (PK-like) 4219
GroES-like NAD(P)-binding Rossmann-fold domains 424
F-box domain RNI-like 419
Homeodomain-like Homeodomain-like 399
ABC transporter transmembrane region ABC transporter transmembrane region 397
Voltage-gated potassium channels cAMP-binding domain-like 395
Barwin-like endoglucanases PHL pollen allergen 381
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 387
Protein kinase-like (PK-like) EF-hand 362
Metal cation-transporting ATPase, ATP-binding domain N HAD-like 364
Metal cation-transporting ATPase, ATP-binding domain N Calcium ATPase, transmembrane domain M 354
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 359
Calcium ATPase, transduction domain A Metal cation-transporting ATPase, ATP-binding domain N 354
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 3510
CCCH zinc finger CCCH zinc finger 3414
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 346
Plant invertase/pectin methylesterase inhibitor Pectin lyase-like 312
Thiolase-like Thiolase-like 312
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 315
Periplasmic binding protein-like I Periplasmic binding protein-like II 314
GroEL equatorial domain-like GroEL apical domain-like 309
Terpenoid cyclases/Protein prenyltransferases Terpenoid synthases 302
P-loop containing nucleoside triphosphate hydrolases Translation proteins 3012
RNI-like RNI-like 3013
C2 domain (Calcium/lipid-binding domain, CaLB) C2 domain (Calcium/lipid-binding domain, CaLB) 308
ACT-like ACT-like 2712
Homeodomain-like Bet v1-like 275
TPR-like Protein kinase-like (PK-like) 272
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 266
Lipase/lipooxygenase domain (PLAT/LH2 domain) Lipoxigenase 264
DNA-binding domain DNA-binding domain 264
GroEL-intermediate domain like GroEL apical domain-like 265
DNA-binding pseudobarrel domain CAD & PB1 domains 254
RING/U-box RING/U-box 2514
(Trans)glycosidases Glycosyl hydrolase domain 258
GroEL equatorial domain-like GroEL-intermediate domain like 254
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 247
Concanavalin A-like lectins/glucanases Protein kinase-like (PK-like) 245
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 244
Eukaryotic type KH-domain (KH-domain type I) Eukaryotic type KH-domain (KH-domain type I) 2311
F-box domain Kelch motif 234
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 233
WD40 repeat-like WD40 repeat-like 2310
Bet v1-like Bet v1-like 237
Thioredoxin-like Thioredoxin-like 2313
Chaperone J-domain HSP40/DnaJ peptide-binding domain 226
Glucocorticoid receptor-like (DNA-binding domain) AN1-like Zinc finger 221
CheY-like Homeodomain-like 225
Glucocorticoid receptor-like (DNA-binding domain) Glucocorticoid receptor-like (DNA-binding domain) 225
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 223
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 2210
WRKY DNA-binding domain WRKY DNA-binding domain 213
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 218
Toll/Interleukin receptor TIR domain P-loop containing nucleoside triphosphate hydrolases 2112
ENTH/VHS domain GAT-like domain 213
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 206
CHY zinc finger-like Zinc hairpin stack 205
Zinc hairpin stack RING/U-box 205
(Trans)glycosidases Beta-D-glucan exohydrolase, C-terminal domain 202
Nucleotidyltransferase PAP/OAS1 substrate-binding domain 204
Ypt/Rab-GAP domain of gyp1p Ypt/Rab-GAP domain of gyp1p 204
PAZ domain Ribonuclease H-like 194
ARM repeat Protein kinase-like (PK-like) 1915
Nucleic acid-binding proteins Nucleic acid-binding proteins 1915
CHY zinc finger-like RING/U-box 194
ENT-like Tudor/PWWP/MBT 182
P-loop containing nucleoside triphosphate hydrolases RNI-like 1812
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 1811
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 189
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 183
HMA, heavy metal-associated domain HMA, heavy metal-associated domain 186
Actin depolymerizing proteins Actin depolymerizing proteins 182
beta-beta-alpha zinc fingers beta-beta-alpha zinc fingers 1810
Acid proteases DNA/RNA polymerases 186
Actin depolymerizing proteins VHP, Villin headpiece domain 182
"Winged helix" DNA-binding domain S-adenosyl-L-methionine-dependent methyltransferases 171
CBS-domain pair CBS-domain pair 177
Homodimeric domain of signal transducing histidine kinase CheY-like 173
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheY-like 173
Ankyrin repeat RING/U-box 175
PGBD-like Metalloproteases ("zincins"), catalytic domain 172
F-box domain Tubby C-terminal domain-like 172
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 1711
Toll/Interleukin receptor TIR domain L domain-like 179
ACT-like Protein kinase-like (PK-like) 171
PYP-like sensor domain (PAS domain) PYP-like sensor domain (PAS domain) 175
EF-hand EF-hand 165
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 166
Single hybrid motif CoA-dependent acyltransferases 165
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 162
RING/U-box Protein kinase-like (PK-like) 166
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 166
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 166
SNARE-like SNARE fusion complex 162
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 162
Ubiquitin-like UBA-like 158
Phospholipase D/nuclease Phospholipase D/nuclease 159
RING/U-box vWA-like 154
RNA-binding domain, RBD Retrovirus zinc finger-like domains 153
RING/U-box Nucleotide-diphospho-sugar transferases 153
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 156
DNA-binding pseudobarrel domain DNA-binding pseudobarrel domain 144
Nucleotidylyl transferase ValRS/IleRS/LeuRS editing domain 146
YhbY-like YhbY-like 144
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex CoA-dependent acyltransferases 144
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 146
SET domain RuBisCo LSMT C-terminal, substrate-binding domain 142
Ran binding protein zinc finger-like Ran binding protein zinc finger-like 149
Class II aaRS and biotin synthetases Class II aaRS ABD-related 149
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 144
Single hybrid motif Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 144
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 145
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 142
UDP-Glycosyltransferase/glycogen phosphorylase HAD-like 142
TPR-like HCP-like 149
Terpenoid cyclases/Protein prenyltransferases Terpenoid cyclases/Protein prenyltransferases 134
Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain SAICAR synthase-like 135
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein S5 domain 2-like 138
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 133
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 133
FYVE/PHD zinc finger FYVE/PHD zinc finger 137
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 135
Purple acid phosphatase, N-terminal domain Metallo-dependent phosphatases 134
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 137
Subtilisin-like PA domain 135
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 126
WD40 repeat-like ARM repeat 129
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 126
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 122
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 122
Translation proteins EF-G C-terminal domain-like 126
vWA-like beta-sandwich domain of Sec23/24 127
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 123
Adenine nucleotide alpha hydrolases-like Protein kinase-like (PK-like) 123
"Winged helix" DNA-binding domain RNA-binding domain, RBD 124
Protein kinase-like (PK-like) Protein kinase-like (PK-like) 127
GroES-like GroES-like 122
Starch-binding domain-like Galactose-binding domain-like 122
P-loop containing nucleoside triphosphate hydrolases RING/U-box 124
Cysteine-rich domain Cysteine-rich domain 118
N-terminal, heterodimerisation domain of RBP7 (RpoE) Nucleic acid-binding proteins 111
Zn-finger domain of Sec23/24 beta-sandwich domain of Sec23/24 116
FAS1 domain FAS1 domain 113
Zn-finger domain of Sec23/24 vWA-like 116
vWA-like Helical domain of Sec23/24 116
RING/U-box WD40 repeat-like 119
EF-G C-terminal domain-like EF-G C-terminal domain-like 115
Calponin-homology domain, CH-domain P-loop containing nucleoside triphosphate hydrolases 113
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 114
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase HSP90 C-terminal domain 114
Thioesterase/thiol ester dehydrase-isomerase Thioesterase/thiol ester dehydrase-isomerase 113
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 112
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 112
Rap30/74 interaction domains "Winged helix" DNA-binding domain 112
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 115
PK beta-barrel domain-like PK C-terminal domain-like 112
Helical domain of Sec23/24 C-terminal, gelsolin-like domain of Sec23/24 115
Leukotriene A4 hydrolase N-terminal domain Metalloproteases ("zincins"), catalytic domain 113
RNase III domain-like dsRNA-binding domain-like 116
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 115
Ribosomal protein S5 domain 2-like HSP90 C-terminal domain 114
beta-sandwich domain of Sec23/24 Helical domain of Sec23/24 116
HCP-like HCP-like 115
RNA-binding domain, RBD CCCH zinc finger 115
PDZ domain-like ClpP/crotonase 112
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 116
Chromo domain-like Chromo domain-like 113
F-box domain Galactose oxidase, central domain 113
RING/U-box TRAF domain-like 112
WW domain WW domain 115
Ubiquitin-like Homeodomain-like 101
EF-hand Ferredoxin reductase-like, C-terminal NADP-linked domain 103
Zn-finger domain of Sec23/24 Helical domain of Sec23/24 105
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 106
Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 105
PH domain-like Oxysterol-binding protein-like 101
Eukaryotic type KH-domain (KH-domain type I) Nucleic acid-binding proteins 104
Protein kinase-like (PK-like) Ankyrin repeat 104
Agglutinin Agglutinin 104
NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains 106
P-loop containing nucleoside triphosphate hydrolases Ankyrin repeat 103
Chromo domain-like P-loop containing nucleoside triphosphate hydrolases 102
"Winged helix" DNA-binding domain L domain-like 107
PreATP-grasp domain Rudiment single hybrid motif 105
HD-domain/PDEase-like Nucleotidyltransferase 106
P-loop containing nucleoside triphosphate hydrolases dsRNA-binding domain-like 104
(Trans)glycosidases Ricin B-like lectins 102
Trypsin-like serine proteases PDZ domain-like 105
E set domains (Trans)glycosidases 104
Clc chloride channel CBS-domain pair 103
Ubiquitin-like BAG domain 104
MFS general substrate transporter MFS general substrate transporter 102
RING/U-box FYVE/PHD zinc finger 105
Acid proteases Saposin 102
GroEL apical domain-like SAICAR synthase-like 103
RNase III domain-like RNase III domain-like 106
Transducin (alpha subunit), insertion domain P-loop containing nucleoside triphosphate hydrolases 102
Aldolase NAD(P)-binding Rossmann-fold domains 103
GAF domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 104
"Winged helix" DNA-binding domain E2F-DP heterodimerization region 104
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 102
SNARE-like Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor 102
FYVE/PHD zinc finger Acyl-CoA N-acyltransferases (Nat) 104
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 105
EF-hand Riboflavin synthase domain-like 103
E set domains AMPKBI-like 92
Composite domain of metallo-dependent hydrolases Metallo-dependent hydrolases 94
Retrovirus zinc finger-like domains Retrovirus zinc finger-like domains 95
CheY-like CheY-like 91
SMAD/FHA domain P-loop containing nucleoside triphosphate hydrolases 92
Nucleotidyltransferase Poly A polymerase C-terminal region-like 94
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 92
Sec7 domain ARM repeat 95
EF-G C-terminal domain-like Ribosomal protein S5 domain 2-like 95
P-loop containing nucleoside triphosphate hydrolases Smc hinge domain 93
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 92
E set domains P-loop containing nucleoside triphosphate hydrolases 94
Translation proteins Ribosomal protein S5 domain 2-like 95
PYP-like sensor domain (PAS domain) Protein kinase-like (PK-like) 92
Galactose-binding domain-like Galactose mutarotase-like 92
PAH2 domain PAH2 domain 91
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 99
Galactose mutarotase-like (Trans)glycosidases 94
Protease propeptides/inhibitors Subtilisin-like 95
Zn-finger domain of Sec23/24 C-terminal, gelsolin-like domain of Sec23/24 94
E set domains Glycosyl hydrolase domain 93
beta-sandwich domain of Sec23/24 C-terminal, gelsolin-like domain of Sec23/24 94
ISP domain Bet v1-like 95
vWA-like C-terminal, gelsolin-like domain of Sec23/24 94
ClpP/crotonase ClpP/crotonase 93
Enolase N-terminal domain-like Enolase C-terminal domain-like 93
Nucleic acid-binding proteins Translation proteins SH3-like domain 93
Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase C-terminal domain-like 95
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 93
Ran binding protein zinc finger-like RNA-binding domain, RBD 94
RCC1/BLIP-II FYVE/PHD zinc finger 92
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 83
DNase I-like DNA/RNA polymerases 84
Homeodomain-like "Winged helix" DNA-binding domain 81
Sec63 N-terminal domain-like E set domains 85
C2 domain (Calcium/lipid-binding domain, CaLB) Formin homology 2 domain (FH2 domain) 83
EF-hand P-loop containing nucleoside triphosphate hydrolases 83
RCC1/BLIP-II RCC1/BLIP-II 83
Amine oxidase N-terminal region Amine oxidase catalytic domain 82
FF domain FF domain 84
Toll/Interleukin receptor TIR domain "Winged helix" DNA-binding domain 85
C2 domain (Calcium/lipid-binding domain, CaLB) Phospholipase D/nuclease 82
Cryptochrome/photolyase, N-terminal domain Cryptochrome/photolyase FAD-binding domain 83
ARM repeat Clathrin adaptor appendage domain 84
ArfGap/RecO-like zinc finger C2 domain (Calcium/lipid-binding domain, CaLB) 84
TRAF domain-like POZ domain 82
RING/U-box Cysteine proteinases 84
GAF domain-like Homodimeric domain of signal transducing histidine kinase 84
RNA-binding domain, RBD PABC (PABP) domain 83
UBA-like XPC-binding domain 84
PH domain-like RCC1/BLIP-II 81
Arabinanase/levansucrase/invertase Concanavalin A-like lectins/glucanases 82
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 84
(Phosphotyrosine protein) phosphatases II C2 domain (Calcium/lipid-binding domain, CaLB) 83
Amine oxidase N-terminal region Amine oxidase N-terminal region 82
FKBP-like FKBP-like 83
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 83
P-loop containing nucleoside triphosphate hydrolases RNase III domain-like 84
Agglutinin Aerolisin/ETX pore-forming domain 82
dsRNA-binding domain-like dsRNA-binding domain-like 86
Methylglyoxal synthase-like Cytidine deaminase-like 81
WD40 repeat-like Quinoprotein alcohol dehydrogenase-like 85
Protein kinase-like (PK-like) PP2C-like 83
PH domain-like FYVE/PHD zinc finger 81
6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 73
ARM repeat TPR-like 72
UBA-like UBA-like 75
Ubiquitin-like XPC-binding domain 73
P-loop containing nucleoside triphosphate hydrolases Sec63 N-terminal domain-like 75
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 75
Protein kinase-like (PK-like) WD40 repeat-like 75
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 75
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 75
BRCT domain BRCT domain 74
CO dehydrogenase ISP C-domain like FAD-binding/transporter-associated domain-like 71
CO dehydrogenase ISP C-domain like Molybdenum cofactor-binding domain 71
POZ domain Skp1 dimerisation domain-like 72
t-snare proteins SNARE fusion complex 72
WW domain FF domain 73
2Fe-2S ferredoxin-like FAD-binding/transporter-associated domain-like 71
FYVE/PHD zinc finger GroEL apical domain-like 72
2Fe-2S ferredoxin-like CO dehydrogenase flavoprotein C-terminal domain-like 71
FAD-binding/transporter-associated domain-like CO dehydrogenase flavoprotein C-terminal domain-like 71
CO dehydrogenase ISP C-domain like CO dehydrogenase molybdoprotein N-domain-like 71
Cdc48 domain 2-like P-loop containing nucleoside triphosphate hydrolases 73
Ubiquitin-like Ubiquitin-like 74
Class I glutamine amidotransferase-like Class I glutamine amidotransferase-like 72
Nucleotidyltransferase PAP/Archaeal CCA-adding enzyme, C-terminal domain 71
FYVE/PHD zinc finger SAICAR synthase-like 72
CO dehydrogenase flavoprotein C-terminal domain-like Molybdenum cofactor-binding domain 71
2Fe-2S ferredoxin-like Molybdenum cofactor-binding domain 71
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 74
FAD-binding/transporter-associated domain-like CO dehydrogenase molybdoprotein N-domain-like 71
PAP/OAS1 substrate-binding domain PAP/Archaeal CCA-adding enzyme, C-terminal domain 71
DUSP-like Cysteine proteinases 72
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Adenine nucleotide alpha hydrolases-like 72
2Fe-2S ferredoxin-like CO dehydrogenase ISP C-domain like 71
CO dehydrogenase ISP C-domain like CO dehydrogenase flavoprotein C-terminal domain-like 71
CAD & PB1 domains Protein kinase-like (PK-like) 71
FAD-binding/transporter-associated domain-like Molybdenum cofactor-binding domain 71
CO dehydrogenase flavoprotein C-terminal domain-like CO dehydrogenase molybdoprotein N-domain-like 71
2Fe-2S ferredoxin-like CO dehydrogenase molybdoprotein N-domain-like 71
Ribosomal L27 protein-like Nucleic acid-binding proteins 72
CO dehydrogenase molybdoprotein N-domain-like Molybdenum cofactor-binding domain 71
P-loop containing nucleoside triphosphate hydrolases ARM repeat 73
FKBP-like TPR-like 72
Periplasmic binding protein-like II ACT-like 72
ThrRS/AlaRS common domain Class II aaRS and biotin synthetases 76
beta-beta-alpha zinc fingers Ribonuclease H-like 74
Glutathione synthetase ATP-binding domain-like Succinyl-CoA synthetase domains 61
FYVE/PHD zinc finger Homeodomain-like 63
(Phosphotyrosine protein) phosphatases II DNA ligase/mRNA capping enzyme, catalytic domain 63
GAF domain-like GAF domain-like 63
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 64
Aconitase iron-sulfur domain LeuD/IlvD-like 62
ADC-like Cdc48 domain 2-like 62
TPR-like Thioredoxin-like 64
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 63
SWIB/MDM2 domain Plus3-like 66
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 63
BEACH domain WD40 repeat-like 65
Cyclophilin-like TPR-like 61
TPR-like Chaperone J-domain 66
RNA-binding domain, RBD PWI domain 62
EF-hand C2 domain (Calcium/lipid-binding domain, CaLB) 63
PEP carboxykinase N-terminal domain PEP carboxykinase-like 62
Cullin repeat-like Cullin homology domain 63
Aldolase Aminoacid dehydrogenase-like, N-terminal domain 61
PUA domain-like S-adenosyl-L-methionine-dependent methyltransferases 62
YrdC/RibB RibA-like 62
PAZ domain RNase III domain-like 63
Galactose oxidase, central domain E set domains 62
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 62
Nucleic acid-binding proteins Retrovirus zinc finger-like domains 63
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 61
(Phosphotyrosine protein) phosphatases II Formin homology 2 domain (FH2 domain) 61
Chromo domain-like S-adenosyl-L-methionine-dependent methyltransferases 62
Ribosomal L27 protein-like Eukaryotic type KH-domain (KH-domain type I) 61
ARM repeat Subdomain of clathrin and coatomer appendage domain 64
CCCH zinc finger RING/U-box 62
FYVE/PHD zinc finger P-loop containing nucleoside triphosphate hydrolases 64
CCCH zinc finger Eukaryotic type KH-domain (KH-domain type I) 62
PUA domain-like SET domain 62
Oxidoreductase molybdopterin-binding domain E set domains 62
EF-hand Voltage-gated potassium channels 64
F1F0 ATP synthase subunit C F1F0 ATP synthase subunit C 61
Calponin-homology domain, CH-domain EB1 dimerisation domain-like 62
P-loop containing nucleoside triphosphate hydrolases PAZ domain 63
Galactose mutarotase-like Starch-binding domain-like 61
Kelch motif Metallo-dependent phosphatases 62
ADC-like P-loop containing nucleoside triphosphate hydrolases 62
P-loop containing nucleoside triphosphate hydrolases TGS-like 63
HMA, heavy metal-associated domain HAD-like 64
PYP-like sensor domain (PAS domain) GAF domain-like 63
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 66
Acid proteases Ribonuclease H-like 63
E set domains CBS-domain pair 52
FYVE/PHD zinc finger SET domain 53
TPR-like Metallo-dependent phosphatases 51
TRAF domain-like TRAF domain-like 52
Clathrin adaptor appendage domain Subdomain of clathrin and coatomer appendage domain 53
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 55
Galactose mutarotase-like Glycosyl hydrolase domain 52
Retrovirus zinc finger-like domains DNA/RNA polymerases 53
Galactose-binding domain-like beta-Galactosidase/glucuronidase domain 52
GST C-terminal domain-like Nucleic acid-binding proteins 52
DNase I-like DNase I-like 51
WD40 repeat-like SNARE fusion complex 53
(Trans)glycosidases Chitinase insertion domain 52
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 54
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FMN-linked oxidoreductases 54
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 55
FMN-linked oxidoreductases Alpha subunit of glutamate synthase, C-terminal domain 54
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 53
Flavoproteins Ferredoxin reductase-like, C-terminal NADP-linked domain 53
beta-Galactosidase/glucuronidase domain (Trans)glycosidases 52
EGF/Laminin Protein kinase-like (PK-like) 53
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 53
Cullin homology domain "Winged helix" DNA-binding domain 52
WD40 repeat-like DPP6 N-terminal domain-like 53
Flavoproteins Riboflavin synthase domain-like 53
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 54
Cullin repeat-like "Winged helix" DNA-binding domain 52
RING/U-box UBA-like 52
EF-hand PLC-like phosphodiesterases 52
Tryptophan synthase beta subunit-like PLP-dependent enzymes ACT-like 54
ARID-like HMG-box 52
RING/U-box PUA domain-like 53
AraD/HMP-PK domain-like HAD-like 51
WGR domain-like ADP-ribosylation 54
F-box domain HCP-like 53
NTF2-like RNA-binding domain, RBD 51
Concanavalin A-like lectins/glucanases P-domain of calnexin/calreticulin 51
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 55
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 51
POZ domain Ankyrin repeat 53
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 51
Formate/glycerate dehydrogenase catalytic domain-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 52
PAZ domain dsRNA-binding domain-like 52
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Alpha subunit of glutamate synthase, C-terminal domain 54
beta-Galactosidase/glucuronidase domain beta-Galactosidase/glucuronidase domain 52
P-loop containing nucleoside triphosphate hydrolases Hypothetical protein YjiA, C-terminal domain 51
Eukaryotic RPB5 N-terminal domain RPB5-like RNA polymerase subunit 51
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 54
Translation proteins Initiation factor IF2/eIF5b, domain 3 53
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 52
Ubiquitin-like Cysteine proteinases 52
Kelch motif Kelch motif 52
PurM N-terminal domain-like PurM C-terminal domain-like 53
Retrovirus zinc finger-like domains RING/U-box 52
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 54
TRAF domain-like Cysteine proteinases 51
WD40 repeat-like NHL repeat 51
Domain of poly(ADP-ribose) polymerase ADP-ribosylation 54
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 52
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 55
GST C-terminal domain-like eEF-1beta-like 51
TPR-like CAD & PB1 domains 51
Transcription factor IIA (TFIIA), alpha-helical domain Transcription factor IIA (TFIIA), beta-barrel domain 52
NagB/RpiA/CoA transferase-like D-ribose-5-phosphate isomerase (RpiA), lid domain 51
L9 N-domain-like Ribosomal protein L9 C-domain 51
Peptidase/esterase 'gauge' domain alpha/beta-Hydrolases 52
RCC1/BLIP-II Protein kinase-like (PK-like) 53
Carbamate kinase-like ALDH-like 51
E set domains Ankyrin repeat 51
PLC-like phosphodiesterases C2 domain (Calcium/lipid-binding domain, CaLB) 52
WGR domain-like Domain of poly(ADP-ribose) polymerase 54
Thioredoxin-like Cysteine-rich domain 52
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 54
Ribonuclease H-like Ribonuclease H-like 54
FAD/NAD(P)-binding domain S-adenosyl-L-methionine-dependent methyltransferases 51
6-phosphogluconate dehydrogenase C-terminal domain-like Aldolase 42
F-box domain Pectin lyase-like 42
DUSP-like DUSP-like 41
Putative DNA-binding domain Class II aaRS and biotin synthetases 42
cAMP-binding domain-like cAMP-binding domain-like 42
HAD-like dsRNA-binding domain-like 42
Macro domain-like CRAL/TRIO domain 41
BAR/IMD domain-like PH domain-like 42
Staphylococcal nuclease Staphylococcal nuclease 42
SWIB/MDM2 domain SWIB/MDM2 domain 42
PH domain-like ArfGap/RecO-like zinc finger 42
Chaperone J-domain E set domains 42
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 41
PX domain BAR/IMD domain-like 42
Cystatin/monellin Cystatin/monellin 42
Plus3-like GYF domain 44
Acetyl-CoA synthetase-like ACP-like 42
ARM repeat C2 domain (Calcium/lipid-binding domain, CaLB) 43
CBS-domain pair CAD & PB1 domains 41
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 43
TPR-like RING/U-box 43
P-loop containing nucleoside triphosphate hydrolases D-aminoacid aminotransferase-like PLP-dependent enzymes 41
Glutathione synthetase ATP-binding domain-like Single hybrid motif 42
ARID-like FYVE/PHD zinc finger 41
Cytochrome c Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor 41
GAF domain-like CheY-like 41
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 42
SAP domain FYVE/PHD zinc finger 41
YgbK-like Aldolase 42
NAD(P)-binding Rossmann-fold domains YgbK-like 42
Glycoside hydrolase/deacetylase Galactose mutarotase-like 42
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 42
DNA-binding domain DNA-binding pseudobarrel domain 42
Carbamate kinase-like ACT-like 42
Nucleotidylyl transferase Nucleotidylyl transferase 41
Nucleoside hydrolase Nucleoside hydrolase 43
WD40 repeat-like DNase I-like 42
Rudiment single hybrid motif Single hybrid motif 42
beta-beta-alpha zinc fingers CCCH zinc finger 42
ClpP/crotonase 6-phosphogluconate dehydrogenase C-terminal domain-like 42
BAR/IMD domain-like ArfGap/RecO-like zinc finger 42
PP2C-like cAMP-binding domain-like 42
Tropomyosin Apolipoprotein A-I 42
WD40 repeat-like C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase 41
Sec63 N-terminal domain-like Sec63 N-terminal domain-like 43
Families 57/38 glycoside transferase middle domain Galactose mutarotase-like 42
Fe-S cluster assembly (FSCA) domain-like Fe-S cluster assembly (FSCA) domain-like 41
vWA-like SPOC domain-like 43
NAD(P)-binding Rossmann-fold domains UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 41
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 43
Nucleic acid-binding proteins "Winged helix" DNA-binding domain 41
HAD-like Riboflavin kinase-like 41
ARM repeat "Winged helix" DNA-binding domain 41
(Phosphotyrosine protein) phosphatases II Nucleic acid-binding proteins 41
PreATP-grasp domain PreATP-grasp domain 43
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 41
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 42
POZ domain TAZ domain 42
"Winged helix" DNA-binding domain Sec63 N-terminal domain-like 43
P-loop containing nucleoside triphosphate hydrolases vWA-like 42
Thioredoxin-like Ubiquitin-like 43
HIT/MYND zinc finger-like Cysteine proteinases 42
ARM repeat Hect, E3 ligase catalytic domain 44
MIT domain P-loop containing nucleoside triphosphate hydrolases 41
Nqo1 FMN-binding domain-like Nqo1 middle domain-like 42
Translational machinery components L30e-like 42
PreATP-grasp domain Single hybrid motif 42
Translation initiation factor 2 beta, aIF2beta, N-terminal domain Zinc-binding domain of translation initiation factor 2 beta 42
Hypothetical protein c14orf129, hspc210 TPR-like 42
Acyl-CoA dehydrogenase C-terminal domain-like Acyl-CoA dehydrogenase C-terminal domain-like 42
RNA-binding domain, RBD WW domain 42
Plant lectins/antimicrobial peptides Lysozyme-like 42
Taf5 N-terminal domain-like WD40 repeat-like 42
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 42
Rhomboid-like UBA-like 41
SWIB/MDM2 domain GYF domain 44
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 41
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 43
DUSP-like Ubiquitin-like 41
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 41
HisI-like all-alpha NTP pyrophosphatases 41
DPP6 N-terminal domain-like alpha/beta-Hydrolases 42
"Winged helix" DNA-binding domain E set domains 43
Glycoside hydrolase/deacetylase Families 57/38 glycoside transferase middle domain 42
6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 41
ClpP/crotonase NAD(P)-binding Rossmann-fold domains 42
6-phosphogluconate dehydrogenase C-terminal domain-like YgbK-like 42
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 41
Ubiquitin-like Zn-binding ribosomal proteins 41
PH domain-like P-loop containing nucleoside triphosphate hydrolases 42
F-box domain HIT/MYND zinc finger-like 42
HCP-like HIT/MYND zinc finger-like 42
tRNA-binding arm Class II aaRS and biotin synthetases 42
Chaperone J-domain Sec63 N-terminal domain-like 42
(Phosphotyrosine protein) phosphatases II E set domains 43
Arp2/3 complex subunits Arp2/3 complex subunits 32
PUA domain-like Nucleotidylyl transferase 31
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 32
Protein kinase-like (PK-like) Acyl-CoA dehydrogenase C-terminal domain-like 31
GYF domain SET domain 32
Retrovirus zinc finger-like domains Ribonuclease H-like 32
Staphylococcal nuclease Tudor/PWWP/MBT 31
Translation proteins Translation proteins 32
Cytochrome b5-like heme/steroid binding domain Ferredoxin reductase-like, C-terminal NADP-linked domain 31
BRCT domain Domain of poly(ADP-ribose) polymerase 32
CRAL/TRIO domain Supernatant protein factor (SPF), C-terminal domain 32
beta-Galactosidase/glucuronidase domain Galactose mutarotase-like 31
Protease propeptides/inhibitors PA domain 32
NAD(P)-binding Rossmann-fold domains ACT-like 33
RING/U-box BRCT domain 32
BRCT domain ADP-ribosylation 32
Ribosomal protein L6 Ribosomal protein L6 32
ArfGap/RecO-like zinc finger Ankyrin repeat 31
PH domain-like BEACH domain 33
TPR-like "Winged helix" DNA-binding domain 31
E set domains Ferredoxin reductase-like, C-terminal NADP-linked domain 31
DNA/RNA polymerases Chromo domain-like 33
Tudor/PWWP/MBT SET domain 32
P-loop containing nucleoside triphosphate hydrolases HAND domain of the nucleosome remodeling ATPase ISWI 31
Carbamate kinase-like Carbamate kinase-like 31
HD-domain/PDEase-like TGS-like 32
BAR/IMD domain-like Ankyrin repeat 31
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 32
Restriction endonuclease-like RuvA domain 2-like 32
cAMP-binding domain-like Protein kinase-like (PK-like) 31
Oxidoreductase molybdopterin-binding domain Riboflavin synthase domain-like 31
E set domains Riboflavin synthase domain-like 31
NAD-binding domain of HMG-CoA reductase Substrate-binding domain of HMG-CoA reductase 31
Cytochrome b5-like heme/steroid binding domain Riboflavin synthase domain-like 31
Dihydrofolate reductase-like YbiA-like 33
N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 L30e-like 31
Protein kinase-like (PK-like) Acyl-CoA dehydrogenase NM domain-like 31
Nucleotidyltransferase TGS-like 32
Protein kinase-like (PK-like) BEACH domain 32
F-box domain WD40 repeat-like 32
Thioredoxin-like "Winged helix" DNA-binding domain 31
Tricorn protease N-terminal domain alpha/beta-Hydrolases 31
Ribonuclease H-like Eukaryotic type KH-domain (KH-domain type I) 31
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 32
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 31
POZ domain POZ domain 33
PIN domain-like Chromo domain-like 31
Ribosomal protein S2 Nucleotide-diphospho-sugar transferases 31
NAD(P)-binding Rossmann-fold domains Citrate synthase 31
Class II aaRS ABD-related C-terminal domain of ProRS 32
Ricin B-like lectins Glycosyl hydrolase domain 31
PH domain-like Ankyrin repeat 31
Translation proteins ThrRS/AlaRS common domain 32
ACP-like Quinoprotein alcohol dehydrogenase-like 31
PUA domain-like Ribosomal protein S5 domain 2-like 32
Tudor/PWWP/MBT FYVE/PHD zinc finger 32
Nucleic acid-binding proteins S-adenosyl-L-methionine-dependent methyltransferases 32
Cysteine proteinases Granulin repeat 32
Metalloproteases ("zincins"), catalytic domain ARM repeat 32
Oxidoreductase molybdopterin-binding domain Cytochrome b5-like heme/steroid binding domain 31
RNA-binding domain, RBD ENTH/VHS domain 31
FYVE/PHD zinc finger SWIB/MDM2 domain 33
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 32
Ran binding protein zinc finger-like Translation proteins 31
HIT/MYND zinc finger-like Creatinase/aminopeptidase 31
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Nucleic acid-binding proteins 32
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 33
Ran binding protein zinc finger-like P-loop containing nucleoside triphosphate hydrolases 31
EF-hand Calponin-homology domain, CH-domain 31
BEACH domain ARM repeat 32
LEA14-like LEA14-like 31
PH domain-like GTPase activation domain, GAP 31
HAD-like BRCT domain 32
HAD-like NTF2-like 31
PUA domain-like alpha/beta knot 31
Hermes dimerisation domain Ribonuclease H-like 33
BRCT domain FYVE/PHD zinc finger 32
Trimeric LpxA-like enzymes ARM repeat 32
Nucleotidylyl transferase Ribosomal protein L25-like 32
PH domain-like Bet v1-like 32
Acetyl-CoA synthetase-like Quinoprotein alcohol dehydrogenase-like 31
Nqo1 FMN-binding domain-like Nqo1C-terminal domain-like 31
HD-domain/PDEase-like ACT-like 32
Riboflavin synthase domain-like Riboflavin synthase domain-like 31
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 31
Dcp2 domain-like Nudix 32
L30e-like alpha/beta knot 31
Formate/glycerate dehydrogenase catalytic domain-like Formate/glycerate dehydrogenase catalytic domain-like 33
5' to 3' exonuclease, C-terminal subdomain Chromo domain-like 31
Adenine nucleotide alpha hydrolases-like RING/U-box 31
WW domain P-loop containing nucleoside triphosphate hydrolases 31
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Ribosomal protein S5 domain 2-like 32
Voltage-gated potassium channels Voltage-gated potassium channels 32
Class II aaRS and biotin synthetases C-terminal domain of ProRS 32
Cysteine-rich domain Mannose-binding lectins 33
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 33
Nucleotidyltransferase ACT-like 32
BAR/IMD domain-like SH3-domain 31
CRAL/TRIO N-terminal domain Supernatant protein factor (SPF), C-terminal domain 32
Ribonuclease PH domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 32
Dihydrofolate reductase-like Thymidylate synthase/dCMP hydroxymethylase 31
FAD/NAD(P)-binding domain EF-hand 31
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 31
Carbamate kinase-like Acyl-CoA N-acyltransferases (Nat) 31
P-loop containing nucleoside triphosphate hydrolases Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain 32
P-loop containing nucleoside triphosphate hydrolases Retrovirus zinc finger-like domains 32
cAMP-binding domain-like Ankyrin repeat 31
HAND domain of the nucleosome remodeling ATPase ISWI Homeodomain-like 31
Leukotriene A4 hydrolase N-terminal domain ARM repeat 32
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 33
Homeodomain-like FAD/NAD(P)-binding domain 32
Class II aaRS and biotin synthetases Translation proteins 32
PH domain-like WD40 repeat-like 33
Actin-like ATPase domain AF1104-like 32
PH domain-like HMG-box 31
Cysteine proteinases UBA-like 31
E set domains Cytochrome b5-like heme/steroid binding domain 31
Dom34/Pelota N-terminal domain-like Translational machinery components 32
NSFL1 (p97 ATPase) cofactor p47, SEP domain Ubiquitin-like 32
Zinc-binding domain of translation initiation factor 2 beta ARM repeat 31
RNA-binding domain, RBD Surp module (SWAP domain) 31
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 32
N-terminal domain of adenylylcyclase associated protein, CAP C-terminal domain of adenylylcyclase associated protein 31
TGS-like ACT-like 32
BRCT domain WGR domain-like 32
FAD/NAD(P)-binding domain SMAD/FHA domain 32
Oxidoreductase molybdopterin-binding domain Ferredoxin reductase-like, C-terminal NADP-linked domain 31
Ubiquitin-like HAD-like 31
WD40 repeat-like Cyclophilin-like 32
Chaperone J-domain 4Fe-4S ferredoxins 33
SNARE fusion complex SNARE fusion complex 31
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 31
Voltage-gated potassium channels Ankyrin repeat 31
Cysteine proteinases Sec-C motif 31
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Eukaryotic type KH-domain (KH-domain type I) 32
Histone-fold ARM repeat 31
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 31
N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 Translational machinery components 31
Homeodomain-like FAD-linked reductases, C-terminal domain 32
Actin-crosslinking proteins Actin-crosslinking proteins 31
LysM domain Protein kinase-like (PK-like) 31
Surp module (SWAP domain) ENTH/VHS domain 31
Nqo1 middle domain-like Nqo1C-terminal domain-like 31
beta-N-acetylhexosaminidase-like domain (Trans)glycosidases 31
Translation initiation factor 2 beta, aIF2beta, N-terminal domain ARM repeat 31
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 32
Rad51 N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 31
PriA/YqbF domain GINS helical bundle-like 32
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 32
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 32
FYVE/PHD zinc finger Plus3-like 33
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 32
C2 domain (Calcium/lipid-binding domain, CaLB) vWA-like 31
Ran binding protein zinc finger-like EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 31
ARM repeat POZ domain 33
UROD/MetE-like UROD/MetE-like 32
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 31
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 31
PLP-dependent transferases PLP-dependent transferases 33
CAD & PB1 domains RING/U-box 21
Glutamyl tRNA-reductase catalytic, N-terminal domain NAD(P)-binding Rossmann-fold domains 21
RuvA domain 2-like Nucleic acid-binding proteins 22
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 21
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 21
Rhomboid-like Ran binding protein zinc finger-like 21
Glucocorticoid receptor-like (DNA-binding domain) BRCT domain 21
Creatinase/aminopeptidase "Winged helix" DNA-binding domain 21
MHC antigen-recognition domain ARM repeat 21
PH domain-like Phospholipase D/nuclease 22
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 22
SPOC domain-like SAP domain 21
Mannose-binding lectins Mannose-binding lectins 22
Acyl-CoA binding protein Kelch motif 22
SET domain TPR-like 22
Starch-binding domain-like Starch-binding domain-like 22
ARM repeat UBA-like 22
Formiminotransferase domain of formiminotransferase-cyclodeaminase. Formiminotransferase domain of formiminotransferase-cyclodeaminase. 21
DPP6 N-terminal domain-like Tricorn protease N-terminal domain 22
Tex N-terminal region-like Ribonuclease H-like 22
HIT-like HIT-like 21
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 21
Formate/glycerate dehydrogenase catalytic domain-like Serine metabolism enzymes domain 22
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleotidylyl transferase 21
Methionyl-tRNA synthetase (MetRS), Zn-domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 21
Rudiment single hybrid motif N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) 21
UraD-Like Transthyretin (synonym: prealbumin) 21
FKBP-like Rhodanese/Cell cycle control phosphatase 21
(Phosphotyrosine protein) phosphatases II Actin depolymerizing proteins 22
2Fe-2S ferredoxin-like alpha-helical ferredoxin 21
Homeodomain-like RING/U-box 22
R1 subunit of ribonucleotide reductase, N-terminal domain PFL-like glycyl radical enzymes 21
Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment DNA breaking-rejoining enzymes 21
Formate/glycerate dehydrogenase catalytic domain-like ACT-like 22
PRP4-like WD40 repeat-like 21
Cytidine deaminase-like Dihydrofolate reductase-like 22
Glucocorticoid receptor-like (DNA-binding domain) Domain of poly(ADP-ribose) polymerase 21
Macro domain-like HIT-like 22
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FAD/NAD(P)-binding domain 22
C2 domain (Calcium/lipid-binding domain, CaLB) MHC antigen-recognition domain 21
Amidase signature (AS) enzymes TPR-like 21
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Nucleic acid-binding proteins 21
Tudor/PWWP/MBT RNA-binding domain, RBD 21
ISP transmembrane anchor ISP domain 21
UDP-Glycosyltransferase/glycogen phosphorylase Ribosomal protein S5 domain 2-like 21
6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK Dihydropteroate synthetase-like 21
Voltage-gated potassium channels TrkA C-terminal domain-like 21
Galactose-binding domain-like NAD(P)-binding Rossmann-fold domains 21
Glucocorticoid receptor-like (DNA-binding domain) ADP-ribosylation 21
Saposin Saposin 21
"Winged helix" DNA-binding domain Protein kinase-like (PK-like) 21
BRCT domain P-loop containing nucleoside triphosphate hydrolases 21
RuvA domain 2-like RuvA domain 2-like 22
NAD(P)-binding Rossmann-fold domains Glutamyl tRNA-reductase dimerization domain 21
CCCH zinc finger S-adenosyl-L-methionine-dependent methyltransferases 21
FMN-dependent nitroreductase-like FMN-dependent nitroreductase-like 21
Ribonuclease H-like RuvA domain 2-like 22
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 22
C2 domain (Calcium/lipid-binding domain, CaLB) Protein kinase-like (PK-like) 21
FMN-linked oxidoreductases FAD/NAD(P)-binding domain 22
FYVE/PHD zinc finger Transducin (alpha subunit), insertion domain 21
Alpha subunit of glutamate synthase, C-terminal domain alpha-helical ferredoxin 22
WD40 repeat-like TPR-like 22
L-aspartase-like Class II aaRS and biotin synthetases 22
Tetrahydrobiopterin biosynthesis enzymes-like Tetrahydrobiopterin biosynthesis enzymes-like 21
P-loop containing nucleoside triphosphate hydrolases PRTase-like 21
Kelch motif S-adenosyl-L-methionine-dependent methyltransferases 22
P-loop containing nucleoside triphosphate hydrolases DNA/RNA polymerases 21
ARM repeat Tudor/PWWP/MBT 22
Ubiquitin-like L domain-like 22
UBA-like Hect, E3 ligase catalytic domain 22
N-terminal nucleophile aminohydrolases (Ntn hydrolases) alpha-helical ferredoxin 22
PapD-like Ankyrin repeat 22
PIN domain-like Nucleic acid-binding proteins 22
eIF2alpha middle domain-like eIF-2-alpha, C-terminal domain 21
PYP-like sensor domain (PAS domain) F-box domain 22
DNase I-like EF-hand 21
PDZ domain-like (Phosphotyrosine protein) phosphatases II 22
FYVE/PHD zinc finger Chromo domain-like 21
F-box domain Clavaminate synthase-like 22
Fumarylacetoacetate hydrolase, FAH, N-terminal domain FAH 21
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 21
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 22
Arabinanase/levansucrase/invertase Nucleotide-diphospho-sugar transferases 22
P-loop containing nucleoside triphosphate hydrolases Bromodomain 22
Thioredoxin-like ERP29 C domain-like 21
PLC-like phosphodiesterases PLC-like phosphodiesterases 21
Aminopeptidase/glucanase lid domain Zn-dependent exopeptidases 21
Alpha subunit of glutamate synthase, C-terminal domain FAD/NAD(P)-binding domain 22
Ribonuclease H-like RING/U-box 21
Galactose-binding domain-like ARM repeat 21
Eukaryotic type KH-domain (KH-domain type I) LigT-like 22
RmlC-like cupins RmlC-like cupins 22
RNI-like ARM repeat 21
Clavaminate synthase-like beta-beta-alpha zinc fingers 22
Actin-crosslinking proteins (Trans)glycosidases 22
DNA-glycosylase Nudix 21
Protein kinase-like (PK-like) PH domain-like 21
Adenine nucleotide alpha hydrolases-like Thioredoxin-like 21
Carboxypeptidase regulatory domain-like Cna protein B-type domain 22
alpha-ketoacid dehydrogenase kinase, N-terminal domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 21
vWA-like SAP domain 21
Elongation factor Ts (EF-Ts), dimerisation domain Elongation factor Ts (EF-Ts), dimerisation domain 22
PLP-dependent transferases Ornithine decarboxylase C-terminal domain 21
Heme-dependent peroxidases Heme-dependent peroxidases 21
Quinoprotein alcohol dehydrogenase-like Protein kinase-like (PK-like) 22
Tex N-terminal region-like Nucleic acid-binding proteins 22
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 22
Nucleic acid-binding proteins eIF-2-alpha, C-terminal domain 21
EF-hand Mitochondrial carrier 22
4'-phosphopantetheinyl transferase 4'-phosphopantetheinyl transferase 22
Class I glutamine amidotransferase-like Ribulose-phoshate binding barrel 21
Calponin-homology domain, CH-domain ARM repeat 21
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 21
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 21
Trimeric LpxA-like enzymes GHMP Kinase, C-terminal domain 21
Single hybrid motif Single hybrid motif 21
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 21
alpha-helical ferredoxin FAD/NAD(P)-binding domain 22
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleic acid-binding proteins 21
Ankyrin repeat Pseudo ankyrin repeat-like 22
F-box domain SET domain 21
P-loop containing nucleoside triphosphate hydrolases RuvA domain 2-like 21
Glutathione synthetase ATP-binding domain-like N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) 21
AN1-like Zinc finger AN1-like Zinc finger 22
2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain Alkaline phosphatase-like 21
Nucleic acid-binding proteins UBA-like 22
cAMP-binding domain-like Thioesterase/thiol ester dehydrase-isomerase 21
Chaperone J-domain CSL zinc finger 21
MFS general substrate transporter Nucleoside hydrolase 22
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 21
Serine metabolism enzymes domain ACT-like 22
FMN-linked oxidoreductases alpha-helical ferredoxin 22
Thioredoxin-like FAD-dependent thiol oxidase 21
Alpha-L RNA-binding motif Pseudouridine synthase 22
PRTase-like PRTase-like 22
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 21
Aspartate/glutamate racemase Aspartate/glutamate racemase 21
Nucleic acid-binding proteins eIF2alpha middle domain-like 21
UDP-Glycosyltransferase/glycogen phosphorylase GHMP Kinase, C-terminal domain 21
Chromo domain-like Homeodomain-like 21
Glucocorticoid receptor-like (DNA-binding domain) WGR domain-like 21
MHC antigen-recognition domain Protein kinase-like (PK-like) 21
CAD & PB1 domains UBA-like 21
Lipoxigenase Lipoxigenase 22
Diaminopimelate epimerase-like Diaminopimelate epimerase-like 21
Putative isomerase YbhE DNase I-like 21
TPR-like PUA domain-like 21
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 21
PLP-binding barrel Alanine racemase C-terminal domain-like 22
Carbon-nitrogen hydrolase Adenine nucleotide alpha hydrolases-like 22
BRCT domain post-AAA+ oligomerization domain-like 21
Ribonuclease H-like Nucleic acid-binding proteins 22
Glutamine synthetase/guanido kinase GatB/YqeY motif 21
Chaperone J-domain RNA-binding domain, RBD 21
ARM repeat DNA/RNA polymerases 22
HAD-like Glycerol-3-phosphate (1)-acyltransferase 21
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 21
Bactericidal permeability-increasing protein, BPI Bactericidal permeability-increasing protein, BPI 22
Glutamyl tRNA-reductase catalytic, N-terminal domain Glutamyl tRNA-reductase dimerization domain 21
LysM domain LysM domain 21
Sec63 N-terminal domain-like DNA/RNA polymerases 21
Chaperone J-domain Thioredoxin-like 21
C-type lectin-like Protein kinase-like (PK-like) 21
POZ domain TPR-like 21
Ankyrin repeat RCC1/BLIP-II 21
FYVE/PHD zinc finger PUA domain-like 21
Nitrite/Sulfite reductase N-terminal domain-like Nitrite/Sulfite reductase N-terminal domain-like 21
Macro domain-like Macro domain-like 22
WWE domain ADP-ribosylation 22
Protein kinase-like (PK-like) NTF2-like 21
UBA-like PUG domain-like 22
ThrRS/AlaRS common domain Class II aaRS ABD-related 22
Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases 22
Nucleic acid-binding proteins Elongation factor Ts (EF-Ts), dimerisation domain 22
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 22
POZ domain Quinoprotein alcohol dehydrogenase-like 21
UDP-Glycosyltransferase/glycogen phosphorylase UDP-Glycosyltransferase/glycogen phosphorylase 22
PA domain RING/U-box 21
PreATP-grasp domain N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) 21
DNA clamp DNA clamp 22
Ribonuclease H-like Chromo domain-like 22
RING/U-box Cyclophilin-like 22
HMG-box HMG-box 22
ARM repeat Ribonuclease H-like 22
SWIB/MDM2 domain eIF1-like 22
Putative DNA-binding domain Putative DNA-binding domain 21
Nucleotidylyl transferase Nucleic acid-binding proteins 21
SMAD/FHA domain Phospholipase D/nuclease 22
alpha-D-mannose-specific plant lectins alpha-D-mannose-specific plant lectins 21
Ribonuclease H-like HRDC-like 22
Tex N-terminal region-like RuvA domain 2-like 22
P-loop containing nucleoside triphosphate hydrolases CYTH-like phosphatases 21
P-loop containing nucleoside triphosphate hydrolases Glucocorticoid receptor-like (DNA-binding domain) 21
Nitrite and sulphite reductase 4Fe-4S domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 21
RNA-binding domain, RBD S-adenosyl-L-methionine-dependent methyltransferases 21
F-box domain ARM repeat 21
Trimeric LpxA-like enzymes Ribosomal protein S5 domain 2-like 21
P-loop containing nucleoside triphosphate hydrolases HRDC-like 22
TPR-like SMR domain-like 22
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 21
alpha/beta knot Nucleic acid-binding proteins 21
ARM repeat Cullin homology domain 22
NAD(P)-binding Rossmann-fold domains Serine metabolism enzymes domain 22
Ricin B-like lectins Ricin B-like lectins 22
Starch-binding domain-like Cna protein B-type domain 22
Nucleotide-diphospho-sugar transferases ARM repeat 21
Endosomal sorting complex assembly domain VPS28 C-terminal domain-like 11
Urease, beta-subunit Metallo-dependent hydrolases 11
Thiamin diphosphate-binding fold (THDP-binding) Enolase N-terminal domain-like 11
SMAD/FHA domain PP2C-like 11
PH domain-like BSD domain-like 11
NAC domain NAC domain 11
Acyl-CoA N-acyltransferases (Nat) Acyl-CoA N-acyltransferases (Nat) 11
Second domain of FERM Prismane protein-like 11
TAZ domain RING/U-box 11
Urease, gamma-subunit Urease, beta-subunit 11
Acid proteases UBA-like 11
ARM repeat alpha/beta knot 11
TGS-like ThrRS/AlaRS common domain 11
PRP4-like Functional domain of the splicing factor Prp18 11
ATP-dependent DNA ligase DNA-binding domain DNA ligase/mRNA capping enzyme, catalytic domain 11
Phosphoglycerate mutase-like Phosphoglycerate mutase-like 11
HAD-like NHL repeat 11
Concanavalin A-like lectins/glucanases PH domain-like 11
BRCT domain DNA polymerase beta, N-terminal domain-like 11
Trimeric LpxA-like enzymes Heme-dependent catalase-like 11
Molybdenum cofactor biosynthesis proteins MoeA C-terminal domain-like 11
L-aspartase-like Class II aaRS ABD-related 11
Starch-binding domain-like Glutathione synthetase ATP-binding domain-like 11
alpha/beta-Hydrolases P-loop containing nucleoside triphosphate hydrolases 11
MoeA N-terminal region -like MoeA C-terminal domain-like 11
ACT-like UDP-Glycosyltransferase/glycogen phosphorylase 11
FYVE/PHD zinc finger Bromodomain 11
PH domain-like Prismane protein-like 11
YjgF-like YjgF-like 11
Folate-binding domain Aminomethyltransferase beta-barrel domain 11
EF-hand TPR-like 11
GST C-terminal domain-like eEF1-gamma domain 11
Surp module (SWAP domain) Surp module (SWAP domain) 11
S15/NS1 RNA-binding domain Class II aaRS ABD-related 11
PH domain-like "Winged helix" DNA-binding domain 11
PDZ domain-like E set domains 11
P-loop containing nucleoside triphosphate hydrolases RNA-binding domain, RBD 11
ACP-like Trimeric LpxA-like enzymes 11
P-loop containing nucleoside triphosphate hydrolases Phosphoglycerate mutase-like 11
CCCH zinc finger WD40 repeat-like 11
Cytidine deaminase-like Cytidine deaminase-like 11
F-box domain Formin homology 2 domain (FH2 domain) 11
Obg GTP-binding protein N-terminal domain Obg GTP-binding protein C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases PLP-dependent transferases 11
SSo0622-like S-adenosyl-L-methionine-dependent methyltransferases 11
SufE/NifU NadA-like 11
DHS-like NAD/FAD-binding domain Enolase N-terminal domain-like 11
Cna protein B-type domain Cna protein B-type domain 11
Concanavalin A-like lectins/glucanases BEACH domain 11
Concanavalin A-like lectins/glucanases P-loop containing nucleoside triphosphate hydrolases 11
Ankyrin repeat S-adenosyl-L-methionine-dependent methyltransferases 11
SET domain SET domain 11
Hypothetical protein SAV1430 Fe-S cluster assembly (FSCA) domain-like 11
HAD-like Thioredoxin-like 11
ACT-like Formyltransferase 11
Class I glutamine amidotransferase-like ADC synthase 11
Molybdenum cofactor biosynthesis proteins Molybdenum cofactor biosynthesis proteins 11
beta-sandwich domain of Sec23/24 RNA-binding domain, RBD 11
POZ domain WD40 repeat-like 11
P-loop containing nucleoside triphosphate hydrolases SMR domain-like 11
TPR-like RNI-like 11
ARM repeat (Trans)glycosidases 11
Adenine nucleotide alpha hydrolases-like DHS-like NAD/FAD-binding domain 11
PsbU/PolX domain-like Nucleotidyltransferase 11
DHS-like NAD/FAD-binding domain alpha/beta-Hydrolases 11
Domain of the SRP/SRP receptor G-proteins Signal peptide-binding domain 11
DHS-like NAD/FAD-binding domain Enolase C-terminal domain-like 11
SPOC domain-like C-terminal domain of Ku80 11
Periplasmic binding protein-like II GlnB-like 11
Class II aaRS and biotin synthetases HD-domain/PDEase-like 11
ARM repeat FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase RING/U-box 11
Voltage-gated potassium channels NAD(P)-binding Rossmann-fold domains 11
Ribosome inactivating proteins (RIP) Ricin B-like lectins 11
Protein kinase-like (PK-like) Class II aaRS and biotin synthetases 11
Galactose oxidase, central domain Myosin rod fragments 11
E set domains RNA-binding domain, RBD 11
HCP-like RNI-like 11
C2 domain (Calcium/lipid-binding domain, CaLB) P-loop containing nucleoside triphosphate hydrolases 11
ARM repeat Chaperone J-domain 11
P-loop containing nucleoside triphosphate hydrolases HIT-like 11
Enolase C-terminal domain-like alpha/beta-Hydrolases 11
Clavaminate synthase-like Protein kinase-like (PK-like) 11
PH domain-like ARM repeat 11
CBS-domain pair FAD-binding/transporter-associated domain-like 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
FGAM synthase PurL, linker domain PurM N-terminal domain-like 11
Trigger factor ribosome-binding domain FKBP-like 11
Enolase N-terminal domain-like alpha/beta-Hydrolases 11
Radical SAM enzymes Acyl-CoA N-acyltransferases (Nat) 11
FAD/NAD(P)-binding domain 4Fe-4S ferredoxins 11
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
POZ domain Galactose-binding domain-like 11
Metalloproteases ("zincins"), catalytic domain HAD-like 11
Tudor/PWWP/MBT DNA repair protein MutS, domain III 11
Oxygen-evolving enhancer protein 3, Cyclophilin-like 11
TAF(II)230 TBP-binding fragment Ubiquitin-like 11
F-box domain L domain-like 11
Concanavalin A-like lectins/glucanases RING/U-box 11
Zn-dependent exopeptidases Carboxypeptidase regulatory domain-like 11
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 11
Phosphoglycerate kinase S-adenosyl-L-methionine-dependent methyltransferases 11
Thioredoxin-like eEF1-gamma domain 11
RING/U-box Ran binding protein zinc finger-like 11
Activating enzymes of the ubiquitin-like proteins Activating enzymes of the ubiquitin-like proteins 11
Cytidine deaminase-like YbiA-like 11
Pseudouridine synthase Pseudouridine synthase 11
SNARE-like Domain of the SRP/SRP receptor G-proteins 11
TPR-like HSP20-like chaperones 11
L domain-like FabD/lysophospholipase-like 11
Starch-binding domain-like Carboxypeptidase regulatory domain-like 11
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 11
FAD/NAD(P)-binding domain alpha/beta-Hydrolases 11
FabD/lysophospholipase-like FabD/lysophospholipase-like 11
Second domain of FERM P-loop containing nucleoside triphosphate hydrolases 11
BRCT domain PsbU/PolX domain-like 11
Homeodomain-like Bromodomain 11
FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) Protein kinase-like (PK-like) 11
RNI-like Glutathione synthetase ATP-binding domain-like 11
ARM repeat SH3-domain 11
Adenine nucleotide alpha hydrolases-like Molybdenum cofactor biosynthesis proteins 11
F-box domain NHL repeat 11
DNA polymerase beta, N-terminal domain-like PsbU/PolX domain-like 11
DEK C-terminal domain SWIB/MDM2 domain 11
Thioredoxin-like NHL repeat 11
Zinc beta-ribbon Cyclin-like 11
Ribonuclease H-like Ribosomal protein L22 11
Starch-binding domain-like Phosphoglycerate mutase-like 11
Formyltransferase FMT C-terminal domain-like 11
4Fe-4S ferredoxins Formate dehydrogenase/DMSO reductase, domains 1-3 11
P-loop containing nucleoside triphosphate hydrolases Obg GTP-binding protein C-terminal domain 11
BRCT domain Lesion bypass DNA polymerase (Y-family), little finger domain 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
R3H domain Ankyrin repeat 11
CoA-dependent acyltransferases CoA-dependent acyltransferases 11
Rudiment single hybrid motif ClpP/crotonase 11
PurS-like PurM N-terminal domain-like 11
F-box domain SMI1/KNR4-like 11
WD40 repeat-like FYVE/PHD zinc finger 11
Rhomboid-like Formin homology 2 domain (FH2 domain) 11
Chromo domain-like Acyl-CoA N-acyltransferases (Nat) 11
PurM C-terminal domain-like Class I glutamine amidotransferase-like 11
L domain-like Formin homology 2 domain (FH2 domain) 11
UBC-like Endosomal sorting complex assembly domain 11
DNase I-like S-adenosyl-L-methionine-dependent methyltransferases 11
Eukaryotic type KH-domain (KH-domain type I) RNA-binding domain, RBD 11
UBA-like NSFL1 (p97 ATPase) cofactor p47, SEP domain 11
Concanavalin A-like lectins/glucanases Calpain large subunit, middle domain (domain III) 11
Ubiquitin-like TPR-like 11
Protein kinase-like (PK-like) (Phosphotyrosine protein) phosphatases II 11
PreATP-grasp domain ClpP/crotonase 11
L domain-like ARM repeat 11
Glucocorticoid receptor-like (DNA-binding domain) HAD-like 11
Ran binding protein zinc finger-like DNase I-like 11
Voltage-gated potassium channels Periplasmic binding protein-like II 11
SMI1/KNR4-like ApaG-like 11
(Trans)glycosidases Ribonuclease H-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 11
Elongation factor TFIIS domain 2 Zinc beta-ribbon 11
SNARE-like P-loop containing nucleoside triphosphate hydrolases 11
Starch-binding domain-like P-loop containing nucleoside triphosphate hydrolases 11
FGAM synthase PurL, linker domain PurM C-terminal domain-like 11
F-box domain Actin-like ATPase domain 11
BRCA2 helical domain BRCA2 tower domain 11
SAP domain WGR domain-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase S13-like H2TH domain 11
Galactose oxidase, central domain P-loop containing nucleoside triphosphate hydrolases 11
Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 Elongation factor TFIIS domain 2 11
Ubiquitin-like Bromodomain 11
FGAM synthase PurL, linker domain Class I glutamine amidotransferase-like 11
Ribokinase-like Thiamin phosphate synthase 11
Concanavalin A-like lectins/glucanases WD40 repeat-like 11
SSo0622-like Kelch motif 11
Ubiquitin-like Hect, E3 ligase catalytic domain 11
FAD/NAD(P)-binding domain Acetyl-CoA synthetase-like 11
Carbamate kinase-like NAD(P)-binding Rossmann-fold domains 11
PDZ domain-like Rubredoxin-like 11
Tubulin nucleotide-binding domain-like Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 11
PYP-like sensor domain (PAS domain) Kelch motif 11
FAD/NAD(P)-binding domain NAD(P)-binding Rossmann-fold domains 11
RING/U-box RNA-binding domain, RBD 11
PP2C-like DNase I-like 11
GST C-terminal domain-like Ribosomal protein L25-like 11
PGBD-like DnaJ/Hsp40 cysteine-rich domain 11
vWA-like Cysteine-rich domain 11
Chaperone J-domain Homeodomain-like 11
Rhodanese/Cell cycle control phosphatase Rhodanese/Cell cycle control phosphatase 11
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 11
HMA, heavy metal-associated domain Metal cation-transporting ATPase, ATP-binding domain N 11
2Fe-2S ferredoxin-like Formate dehydrogenase/DMSO reductase, domains 1-3 11
USP8 N-terminal domain-like JAB1/MPN domain 11
Zinc beta-ribbon Zinc beta-ribbon 11
FAD/NAD(P)-binding domain HI0933 insert domain-like 11
Rhodanese/Cell cycle control phosphatase alpha/beta-Hydrolases 11
2Fe-2S ferredoxin-like 4Fe-4S ferredoxins 11
UBA-like post-AAA+ oligomerization domain-like 11
Ankyrin repeat TPR-like 11
Nucleic acid-binding proteins SH2 domain 11
PUA domain-like SWIB/MDM2 domain 11
Cryptochrome/photolyase, N-terminal domain alpha/beta-Hydrolases 11
PRTase-like Ribulose-phoshate binding barrel 11
FYSH domain beta-beta-alpha zinc fingers 11
PDZ domain-like PDZ domain-like 11
DNA-binding domain Formin homology 2 domain (FH2 domain) 11
FYVE/PHD zinc finger GYF domain 11
TPR-like RNA-binding domain, RBD 11
POZ domain Pentapeptide repeat-like 11
ACT-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 11
RNA-binding domain, RBD HCP-like 11
beta-beta-alpha zinc fingers Ankyrin repeat 11
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 11
CarD-like TRCF domain-like 11
SBT domain Ankyrin repeat 11
Outer arm dynein light chain 1 RNI-like 11
HCP-like SMR domain-like 11
FYVE/PHD zinc finger alpha/beta-Hydrolases 11
Tricorn protease domain 2 WD40 repeat-like 11
Acyl-CoA binding protein Ankyrin repeat 11
Single hybrid motif ClpP/crotonase 11
UBA-like KA1-like 11
Tropomyosin Tropomyosin 11
P-loop containing nucleoside triphosphate hydrolases GIY-YIG endonuclease 11
BRCT domain Nucleotidyltransferase 11
RuvA domain 2-like SH2 domain 11
lambda repressor-like DNA-binding domains Cyanase C-terminal domain 11
Heat shock protein 70kD (HSP70), C-terminal subdomain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
Ubiquitin-like Protein kinase-like (PK-like) 11
Nucleoplasmin-like core domain FKBP-like 11
GYF domain GYF domain 11
dsRNA-binding domain-like FKBP-like 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
RING/U-box Arginase/deacetylase 11
Second domain of FERM PH domain-like 11
Tudor/PWWP/MBT DNA repair protein MutS, domain I 11
Metallo-dependent hydrolases Glutamine synthetase/guanido kinase 11
HD-domain/PDEase-like EF-hand 11
F-box domain P-loop containing nucleoside triphosphate hydrolases 11
PurM N-terminal domain-like Class I glutamine amidotransferase-like 11
P-loop containing nucleoside triphosphate hydrolases Prismane protein-like 11
Zn-dependent exopeptidases Transferrin receptor-like dimerisation domain 11
Acetyl-CoA synthetase-like Heme-dependent catalase-like 11
CarD-like P-loop containing nucleoside triphosphate hydrolases 11
C2 domain (Calcium/lipid-binding domain, CaLB) Domain of the SRP/SRP receptor G-proteins 11
R3H domain P-loop containing nucleoside triphosphate hydrolases 11
Concanavalin A-like lectins/glucanases SH2 domain 11
PUG domain-like Ubiquitin-like 11
Protein kinase-like (PK-like) UBA-like 11
(Trans)glycosidases (Trans)glycosidases 11
PA domain Zn-dependent exopeptidases 11
DNA/RNA polymerases DNA/RNA polymerases 11
Thiamin pyrophosphokinase, catalytic domain Thiamin pyrophosphokinase, substrate-binding domain 11
FYVE/PHD zinc finger ARM repeat 11
DNA repair protein MutS, domain I GIY-YIG endonuclease 11
UBC-like Protein kinase-like (PK-like) 11
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 11
BRCT domain DNA/RNA polymerases 11
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 11
Ubiquitin-like Cap-Gly domain 11
Chaperone J-domain beta-beta-alpha zinc fingers 11
Nucleotidyltransferase EF-hand 11
Macro domain-like Zn-dependent exopeptidases 11
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 11
Thioredoxin-like Six-hairpin glycosidases 11
ARM repeat FabD/lysophospholipase-like 11
Chelatase Chlorophyll a-b binding protein 11
DNA repair protein MutS, domain III SMR domain-like 11
Pre-PUA domain PUA domain-like 11
Metallo-hydrolase/oxidoreductase Metallo-hydrolase/oxidoreductase 11
Clavaminate synthase-like RING/U-box 11
FKBP-like S-adenosyl-L-methionine-dependent methyltransferases 11
Tudor/PWWP/MBT DNA repair protein MutS, domain II 11
PH domain-like (Phosphotyrosine protein) phosphatases II 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
P-loop containing nucleoside triphosphate hydrolases TPR-like 11
Ubiquitin-like P-loop containing nucleoside triphosphate hydrolases 11
Glycerol-3-phosphate (1)-acyltransferase EF-hand 11
Sec1/munc18-like (SM) proteins Sec1/munc18-like (SM) proteins 11
Adenine nucleotide alpha hydrolases-like YjgF-like 11
TATA-box binding protein-like DNA-glycosylase 11
Tex N-terminal region-like SH2 domain 11
Dimeric alpha+beta barrel Dimeric alpha+beta barrel 11
DNA polymerase beta, N-terminal domain-like Nucleotidyltransferase 11
Cytochrome P450 Cytochrome P450 11
Lysozyme-like Lysozyme-like 11
Amidase signature (AS) enzymes Amidase signature (AS) enzymes 11
Thiamin diphosphate-binding fold (THDP-binding) Enolase C-terminal domain-like 11
SAM/Pointed domain Metallo-hydrolase/oxidoreductase 11
Protein kinase-like (PK-like) Class II aaRS ABD-related 11
Hypothetical protein AF0491, middle domain beta-beta-alpha zinc fingers 11
PA domain Transferrin receptor-like dimerisation domain 11
GroEL equatorial domain-like GroEL equatorial domain-like 11
GroEL-intermediate domain like GroEL-intermediate domain like 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
Flavoproteins Radical SAM enzymes 11
DAK1/DegV-like DhaL-like 11
Carbamate kinase-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 11
Fe-S cluster assembly (FSCA) domain-like P-loop containing nucleoside triphosphate hydrolases 11
PUA domain-like eIF1-like 11
F-box domain Protein kinase-like (PK-like) 11
RNA-binding domain, RBD Clavaminate synthase-like 11
FYVE/PHD zinc finger GroEL-intermediate domain like 11
Metallo-hydrolase/oxidoreductase ATP-dependent DNA ligase DNA-binding domain 11
vWA-like C-terminal domain of Ku80 11
Protein prenylyltransferase L domain-like 11
PurS-like PurM C-terminal domain-like 11
Class II aaRS and biotin synthetases GAD domain-like 11
F-box domain LysM domain 11
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 11
Heme oxygenase-like HAD-like 11
beta-beta-alpha zinc fingers S-adenosyl-L-methionine-dependent methyltransferases 11
Thiamin phosphate synthase P-loop containing nucleoside triphosphate hydrolases 11
PurS-like Class I glutamine amidotransferase-like 11
UBC-like UBA-like 11
Concanavalin A-like lectins/glucanases Concanavalin A-like lectins/glucanases 11
DNA/RNA polymerases Ribosomal protein L22 11
WD40 repeat-like TolB, C-terminal domain 11
Ubiquitin-like Acid proteases 11
S13-like H2TH domain Ribosomal protein S5 domain 2-like 11
Acyl-CoA N-acyltransferases (Nat) Bromodomain 11
NTF2-like Probable bacterial effector-binding domain 11
Fucose-specific lectin Fucose-specific lectin 11
E set domains E set domains 11
beta-sandwich domain of Sec23/24 P-loop containing nucleoside triphosphate hydrolases 11
TAF(II)230 TBP-binding fragment Bromodomain 11
FAD/NAD(P)-binding domain Thioredoxin-like 11
Galactose oxidase, central domain Galactose oxidase, central domain 11
(Phosphotyrosine protein) phosphatases II (Phosphotyrosine protein) phosphatases II 11
RNA-binding domain, RBD DPP6 N-terminal domain-like 11
Outer arm dynein light chain 1 L domain-like 11
FAD/NAD(P)-binding domain ACP-like 11
Acid proteases Chromo domain-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 11
S15/NS1 RNA-binding domain Class II aaRS and biotin synthetases 11
TATA-box binding protein-like TATA-box binding protein-like 11
PreATP-grasp domain Methylglyoxal synthase-like 11
Tudor/PWWP/MBT P-loop containing nucleoside triphosphate hydrolases 11
FAD/NAD(P)-binding domain Trimeric LpxA-like enzymes 11
Protein kinase-like (PK-like) KA1-like 11
Chaperone J-domain HSC20 (HSCB), C-terminal oligomerisation domain 11
Concanavalin A-like lectins/glucanases Cysteine proteinases 11
GST C-terminal domain-like Nucleotidylyl transferase 11
Alpha-L RNA-binding motif S-adenosyl-L-methionine-dependent methyltransferases 11
UBA-like P-loop containing nucleoside triphosphate hydrolases 11
Surp module (SWAP domain) Ubiquitin-like 11
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 11
BRCA2 helical domain Nucleic acid-binding proteins 11
Urease, gamma-subunit Composite domain of metallo-dependent hydrolases 11
Concanavalin A-like lectins/glucanases Nucleotide-diphospho-sugar transferases 11
Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 11
RuBisCO, large subunit, small (N-terminal) domain RuBisCo, C-terminal domain 11
POZ domain Putative isomerase YbhE 11
SAP domain Domain of poly(ADP-ribose) polymerase 11
YjeF N-terminal domain-like FMN-binding split barrel 11
Transmembrane di-heme cytochromes a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 11
PRC-barrel domain PRC-barrel domain 11
Dom34/Pelota N-terminal domain-like L30e-like 11
ACP-like Heme-dependent catalase-like 11
FYSH domain Hypothetical protein AF0491, middle domain 11
dsRNA-binding domain-like S-adenosyl-L-methionine-dependent methyltransferases 11
Trypsin-like serine proteases Trypsin-like serine proteases 11
Thiamin diphosphate-binding fold (THDP-binding) alpha/beta-Hydrolases 11
MoeA N-terminal region -like Molybdenum cofactor biosynthesis proteins 11
(Phosphotyrosine protein) phosphatases II NAD kinase/diacylglycerol kinase-like 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11
Trimeric LpxA-like enzymes Trimeric LpxA-like enzymes 11
SAP domain SAP domain 11
S-adenosyl-L-methionine-dependent methyltransferases PLP-dependent transferases 11
UBC-like RING/U-box 11
Lipocalins Lipocalins 11
Eukaryotic type KH-domain (KH-domain type I) Retrovirus zinc finger-like domains 11
WD40 repeat-like Bromodomain 11
NAP-like NAP-like 11
4Fe-4S ferredoxins P-loop containing nucleoside triphosphate hydrolases 11
SufE/NifU BolA-like 11
C-terminal UvrC-binding domain of UvrB ApaG-like 11
ATP-dependent DNA ligase DNA-binding domain Nucleic acid-binding proteins 11
Glutathione synthetase ATP-binding domain-like Phosphoenolpyruvate/pyruvate domain 11
Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 Zinc beta-ribbon 11
Metallo-dependent hydrolases Glutamine synthetase, N-terminal domain 11
HCP-like Homing endonucleases 11
beta-beta-alpha zinc fingers Hermes dimerisation domain 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
P-loop containing nucleoside triphosphate hydrolases Macro domain-like 11
CCCH zinc finger HIT-like 11
Cyclophilin-like RNA-binding domain, RBD 11
FYVE/PHD zinc finger Ankyrin repeat 11
FAD/NAD(P)-binding domain Heme-dependent catalase-like 11
SAP domain ADP-ribosylation 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
Nucleic acid-binding proteins GAD domain-like 11
Activator of Hsp90 ATPase, Aha1 Bet v1-like 11
Chromo domain-like Ankyrin repeat 11
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 11
SAP domain CCCH zinc finger 11
PurS-like FGAM synthase PurL, linker domain 11
Clathrin heavy-chain terminal domain ARM repeat 11
FAD-linked reductases, C-terminal domain 4Fe-4S ferredoxins 11
ISP domain Chlorophyll a-b binding protein 11
Nucleic acid-binding proteins TPR-like 11
F-box domain Quinoprotein alcohol dehydrogenase-like 11
Six-hairpin glycosidases Carbohydrate-binding domain 11
ARM repeat alpha/beta-Hydrolases 11
PYP-like sensor domain (PAS domain) Galactose oxidase, central domain 11
EGF/Laminin EGF/Laminin 11
Acetyl-CoA synthetase-like Trimeric LpxA-like enzymes 11
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 11
GroEL-intermediate domain like SAICAR synthase-like 11
alpha/beta-Hydrolases NAD(P)-binding Rossmann-fold domains 11
ARID-like HSP20-like chaperones 11
Ribonuclease H-like SH2 domain 11
TAZ domain TAZ domain 11
HMA, heavy metal-associated domain Cu,Zn superoxide dismutase-like 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Staphylococcal nuclease 11
F-box domain ApaG-like 11
TAZ domain FYVE/PHD zinc finger 11
Galactose oxidase, central domain Formin homology 2 domain (FH2 domain) 11
Quinoprotein alcohol dehydrogenase-like Quinoprotein alcohol dehydrogenase-like 11
Trypsin-like serine proteases DNA/RNA polymerases 11
F-box domain NTF2-like 11
Glutathione synthetase ATP-binding domain-like ClpP/crotonase 11
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 11
SAP domain RNA-binding domain, RBD 11
Urease, gamma-subunit Metallo-dependent hydrolases 11
Nucleic acid-binding proteins BRCA2 tower domain 11
Protein kinase-like (PK-like) beta-lactamase/transpeptidase-like 11
Urease, beta-subunit Composite domain of metallo-dependent hydrolases 11
TPR-like FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) 11
Pseudouridine synthase PUA domain-like 11
TGS-like Class II aaRS and biotin synthetases 11
Ankyrin repeat Ankyrin repeat 11
Nucleotidylyl transferase tRNA-binding arm 11
MOSC N-terminal domain-like PK beta-barrel domain-like 11
Rhodanese/Cell cycle control phosphatase FYVE/PHD zinc finger 11
FKBP-like Triger factor/SurA peptide-binding domain-like 11
Cysteine proteinases Calpain large subunit, middle domain (domain III) 11
PDZ domain-like TPR-like 11
Periplasmic binding protein-like I Voltage-gated potassium channels 11

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