SUPERFAMILY 1.75 HMM library and genome assignments server

Domain combination pairs in Oryza sativa v193

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

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Domain combination pairs

1663 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
Ribonuclease H-like DNA/RNA polymerases 3158160
DNA/RNA polymerases Retrovirus zinc finger-like domains 136391
Ribonuclease H-like Retrovirus zinc finger-like domains 123473
DNA/RNA polymerases Acid proteases 113476
Ribonuclease H-like Ribonuclease H-like 96444
Ribonuclease H-like Acid proteases 92955
Retrovirus zinc finger-like domains Acid proteases 79844
Ribonuclease H-like Chromo domain-like 74338
Chromo domain-like DNA/RNA polymerases 70447
Acid proteases Chromo domain-like 55929
Retrovirus zinc finger-like domains Chromo domain-like 53422
P-loop containing nucleoside triphosphate hydrolases L domain-like 41553
L domain-like Protein kinase-like (PK-like) 40152
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 26465
L domain-like L domain-like 25466
F-box domain RNI-like 24515
L domain-like RNI-like 19161
Retrovirus zinc finger-like domains Formin homology 2 domain (FH2 domain) 14317
RNA-binding domain, RBD RNA-binding domain, RBD 13922
Formin homology 2 domain (FH2 domain) Acid proteases 13914
Formin homology 2 domain (FH2 domain) DNA/RNA polymerases 13816
alpha-D-mannose-specific plant lectins Protein kinase-like (PK-like) 13211
Retrovirus zinc finger-like domains Retrovirus zinc finger-like domains 12818
Formin homology 2 domain (FH2 domain) Ribonuclease H-like 12613
DNase I-like DNA/RNA polymerases 11522
RNI-like Protein kinase-like (PK-like) 11332
POZ domain TRAF domain-like 1069
beta-beta-alpha zinc fingers Ribonuclease H-like 10315
Formin homology 2 domain (FH2 domain) Chromo domain-like 987
Actin-like ATPase domain Actin-like ATPase domain 9718
Thioredoxin-like GST C-terminal domain-like 926
Concanavalin A-like lectins/glucanases Protein kinase-like (PK-like) 8417
P-loop containing nucleoside triphosphate hydrolases RNI-like 8326
TPR-like TPR-like 7321
Thiolase-like Thiolase-like 703
Nucleic acid-binding proteins Nucleic acid-binding proteins 7032
GroES-like NAD(P)-binding Rossmann-fold domains 654
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 655
HAD-like Calcium ATPase, transmembrane domain M 6214
Cyclin-like Cyclin-like 6110
Barwin-like endoglucanases PHL pollen allergen 592
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 5811
DNA/RNA polymerases DNA/RNA polymerases 5742
Calcium ATPase, transduction domain A HAD-like 5711
ARM repeat ARM repeat 5724
Terpenoid cyclases/Protein prenyltransferases Terpenoid synthases 554
RING/U-box ARM repeat 558
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 5416
Cupredoxins Cupredoxins 538
RNI-like RNI-like 5327
RING/U-box RING/U-box 5226
S-adenosyl-L-methionine-dependent methyltransferases S-adenosyl-L-methionine-dependent methyltransferases 505
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 507
Protein kinase-like (PK-like) EF-hand 482
EGF/Laminin Protein kinase-like (PK-like) 4711
(Trans)glycosidases Glycosyl hydrolase domain 4611
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 466
P-loop containing nucleoside triphosphate hydrolases Nucleic acid-binding proteins 4620
Galactose-binding domain-like (Trans)glycosidases 4513
ABC transporter transmembrane region ABC transporter transmembrane region 439
Protein kinase-like (PK-like) Protein kinase-like (PK-like) 4020
CRAL/TRIO N-terminal domain CRAL/TRIO domain 396
"Winged helix" DNA-binding domain S-adenosyl-L-methionine-dependent methyltransferases 384
P-loop containing nucleoside triphosphate hydrolases Translation proteins 3817
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 378
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 3710
C2 domain (Calcium/lipid-binding domain, CaLB) C2 domain (Calcium/lipid-binding domain, CaLB) 3711
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 377
CCCH zinc finger CCCH zinc finger 3718
F-box domain Galactose oxidase, central domain 367
Homeodomain-like Homeodomain-like 3511
beta-beta-alpha zinc fingers beta-beta-alpha zinc fingers 3514
Ubiquitin-like Ubiquitin-like 3411
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 337
F-box domain L domain-like 337
RNA-binding domain, RBD Retrovirus zinc finger-like domains 324
Homeodomain-like Bet v1-like 317
Voltage-gated potassium channels cAMP-binding domain-like 318
DNA-binding domain DNA-binding domain 317
Terpenoid cyclases/Protein prenyltransferases Terpenoid cyclases/Protein prenyltransferases 304
Metal cation-transporting ATPase, ATP-binding domain N Calcium ATPase, transmembrane domain M 304
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 3015
ENTH/VHS domain GAT-like domain 303
Metal cation-transporting ATPase, ATP-binding domain N HAD-like 304
DNA-binding pseudobarrel domain CAD & PB1 domains 303
GroEL-intermediate domain like GroEL apical domain-like 295
Nucleotidyltransferase PAP/OAS1 substrate-binding domain 297
Calcium ATPase, transduction domain A Metal cation-transporting ATPase, ATP-binding domain N 293
Ran binding protein zinc finger-like Ran binding protein zinc finger-like 2812
Purple acid phosphatase, N-terminal domain Metallo-dependent phosphatases 284
Ankyrin repeat TPR-like 284
Thioredoxin-like Thioredoxin-like 2813
(Trans)glycosidases Beta-D-glucan exohydrolase, C-terminal domain 283
Ypt/Rab-GAP domain of gyp1p Ypt/Rab-GAP domain of gyp1p 275
DNase I-like Ribonuclease H-like 2711
ACT-like ACT-like 2710
GroEL equatorial domain-like GroEL apical domain-like 277
DNA-binding pseudobarrel domain DNA-binding pseudobarrel domain 279
Trypsin-like serine proteases PDZ domain-like 274
Adenine nucleotide alpha hydrolases-like Protein kinase-like (PK-like) 263
RING/U-box Protein kinase-like (PK-like) 267
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 267
POZ domain Skp1 dimerisation domain-like 265
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 255
Phospholipase D/nuclease Phospholipase D/nuclease 259
Chaperone J-domain HSP40/DnaJ peptide-binding domain 259
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 258
PAZ domain Ribonuclease H-like 254
Growth factor receptor domain Protein kinase-like (PK-like) 246
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 245
GroEL equatorial domain-like GroEL-intermediate domain like 244
ARM repeat Protein kinase-like (PK-like) 2314
Bet v1-like Bet v1-like 237
Plant invertase/pectin methylesterase inhibitor Pectin lyase-like 234
F-box domain Kelch motif 235
Single hybrid motif CoA-dependent acyltransferases 233
vWA-like RING/U-box 236
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 234
Eukaryotic type KH-domain (KH-domain type I) Eukaryotic type KH-domain (KH-domain type I) 2311
Glucocorticoid receptor-like (DNA-binding domain) Glucocorticoid receptor-like (DNA-binding domain) 229
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 223
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 212
Galactose-binding domain-like Galactose-binding domain-like 215
Ubiquitin-like UBA-like 219
CHY zinc finger-like Zinc hairpin stack 205
GroES-like GroES-like 202
WRKY DNA-binding domain WRKY DNA-binding domain 204
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 2010
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 206
Single hybrid motif Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 202
F-box domain Tubby C-terminal domain-like 202
UDP-Glycosyltransferase/glycogen phosphorylase HAD-like 203
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex CoA-dependent acyltransferases 202
CHY zinc finger-like RING/U-box 194
Glucocorticoid receptor-like (DNA-binding domain) AN1-like Zinc finger 193
dsRNA-binding domain-like dsRNA-binding domain-like 196
Periplasmic binding protein-like I Periplasmic binding protein-like II 194
SNARE-like SNARE fusion complex 192
Zinc hairpin stack RING/U-box 194
Protein kinase-like (PK-like) KA1-like 182
Trypsin-like serine proteases Trypsin-like serine proteases 186
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein S5 domain 2-like 189
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 189
Glutathione synthetase ATP-binding domain-like PreATP-grasp domain 189
MFS general substrate transporter MFS general substrate transporter 183
SNARE-like Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor 183
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 181
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 1710
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 178
Lipase/lipooxygenase domain (PLAT/LH2 domain) Lipoxigenase 172
Translation proteins EF-G C-terminal domain-like 178
CBS-domain pair CBS-domain pair 167
PYP-like sensor domain (PAS domain) Protein kinase-like (PK-like) 162
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 166
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 167
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 163
PYP-like sensor domain (PAS domain) PYP-like sensor domain (PAS domain) 164
EF-hand Riboflavin synthase domain-like 163
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 163
FKBP-like FKBP-like 156
C2 domain (Calcium/lipid-binding domain, CaLB) Phospholipase D/nuclease 152
E set domains (Trans)glycosidases 156
Clc chloride channel CBS-domain pair 154
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 152
EF-hand Ferredoxin reductase-like, C-terminal NADP-linked domain 152
EF-G C-terminal domain-like EF-G C-terminal domain-like 156
E set domains Glycosyl hydrolase domain 145
Activating enzymes of the ubiquitin-like proteins Activating enzymes of the ubiquitin-like proteins 143
beta-sandwich domain of Sec23/24 vWA-like 145
UBA-like UBA-like 145
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 142
Arabinanase/levansucrase/invertase Concanavalin A-like lectins/glucanases 142
FYVE/PHD zinc finger FYVE/PHD zinc finger 147
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 145
FYVE/PHD zinc finger RING/U-box 148
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 142
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 143
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 142
Zn-finger domain of Sec23/24 vWA-like 145
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 146
Ankyrin repeat RING/U-box 142
GAF domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 146
beta-sandwich domain of Sec23/24 Zn-finger domain of Sec23/24 145
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 143
Cryptochrome/photolyase, N-terminal domain Cryptochrome/photolyase FAD-binding domain 142
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 143
EF-hand EF-hand 145
Retrovirus zinc finger-like domains DNase I-like 145
PK beta-barrel domain-like PK C-terminal domain-like 142
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 144
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 134
Zn-finger domain of Sec23/24 Helical domain of Sec23/24 134
RCC1/BLIP-II RCC1/BLIP-II 133
DNA/RNA polymerases Cysteine proteinases 1312
Acid proteases Saposin 132
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheY-like 137
Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase C-terminal domain-like 135
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 135
RING/U-box P-loop containing nucleoside triphosphate hydrolases 136
Protein kinase-like (PK-like) TPR-like 135
HMA, heavy metal-associated domain HMA, heavy metal-associated domain 137
beta-sandwich domain of Sec23/24 Helical domain of Sec23/24 134
CCCH zinc finger RNA-binding domain, RBD 133
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 137
vWA-like Helical domain of Sec23/24 134
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 134
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 125
Class I glutamine amidotransferase-like Class I glutamine amidotransferase-like 122
ArfGap/RecO-like zinc finger C2 domain (Calcium/lipid-binding domain, CaLB) 122
vWA-like C-terminal, gelsolin-like domain of Sec23/24 124
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 124
Zn-finger domain of Sec23/24 C-terminal, gelsolin-like domain of Sec23/24 124
ACT-like Protein kinase-like (PK-like) 121
PUA domain-like SET domain 123
WD40 repeat-like WD40 repeat-like 129
TPR-like RING/U-box 124
beta-sandwich domain of Sec23/24 C-terminal, gelsolin-like domain of Sec23/24 124
Translation proteins SH3-like domain Nucleic acid-binding proteins 124
Homodimeric domain of signal transducing histidine kinase CheY-like 127
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 121
TPR-like HCP-like 126
CheY-like Homeodomain-like 123
Ribosomal protein S5 domain 2-like HSP90 C-terminal domain 124
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 123
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 115
ISP domain Bet v1-like 112
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 114
Nucleotidyltransferase PAP/Archaeal CCA-adding enzyme, C-terminal domain 113
Helical domain of Sec23/24 C-terminal, gelsolin-like domain of Sec23/24 113
RCC1/BLIP-II FYVE/PHD zinc finger 113
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase HSP90 C-terminal domain 113
EF-G C-terminal domain-like Ribosomal protein S5 domain 2-like 115
PreATP-grasp domain Rudiment single hybrid motif 115
PH domain-like FYVE/PHD zinc finger 113
Translation proteins Ribosomal protein S5 domain 2-like 115
PAP/OAS1 substrate-binding domain PAP/Archaeal CCA-adding enzyme, C-terminal domain 113
Cullin homology domain "Winged helix" DNA-binding domain 113
Class II aaRS and biotin synthetases Class II aaRS ABD-related 116
FAS1 domain FAS1 domain 114
Concanavalin A-like lectins/glucanases P-domain of calnexin/calreticulin 111
POZ domain Ankyrin repeat 102
Enolase N-terminal domain-like Enolase C-terminal domain-like 102
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 102
E set domains P-loop containing nucleoside triphosphate hydrolases 104
Ribonuclease H-like L domain-like 1010
F-box domain F-box domain 106
Cullin repeat-like "Winged helix" DNA-binding domain 102
alpha-D-mannose-specific plant lectins Hairpin loop containing domain-like 105
RNA-binding domain, RBD Ran binding protein zinc finger-like 105
ARM repeat WD40 repeat-like 109
DPP6 N-terminal domain-like alpha/beta-Hydrolases 102
Protein kinase-like (PK-like) WD40 repeat-like 108
Ankyrin repeat Ankyrin repeat 104
Adenine nucleotide alpha hydrolases-like RING/U-box 101
E set domains Ankyrin repeat 104
RING/U-box Nucleotide-diphospho-sugar transferases 102
UBA-like XPC-binding domain 102
RNase III domain-like RNase III domain-like 108
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 104
Thioesterase/thiol ester dehydrase-isomerase Thioesterase/thiol ester dehydrase-isomerase 105
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 102
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 103
GroEL apical domain-like SAICAR synthase-like 104
SNARE fusion complex SNARE fusion complex 102
YhbY-like YhbY-like 104
Ubiquitin-like XPC-binding domain 102
Hairpin loop containing domain-like Protein kinase-like (PK-like) 105
GAF domain-like Homodimeric domain of signal transducing histidine kinase 106
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 102
Cullin repeat-like Cullin homology domain 102
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 96
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 94
"Winged helix" DNA-binding domain RNA-binding domain, RBD 94
FYVE/PHD zinc finger Acyl-CoA N-acyltransferases (Nat) 95
DNA/RNA polymerases L domain-like 99
RNase III domain-like dsRNA-binding domain-like 98
Subtilisin-like PA domain 93
PH domain-like RCC1/BLIP-II 92
Ubiquitin-like Protein kinase-like (PK-like) 94
ARM repeat Clathrin adaptor appendage domain 93
Kelch motif Kelch motif 95
(Trans)glycosidases Galactose mutarotase-like 94
Cysteine-rich domain Cysteine-rich domain 94
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 93
RING/U-box TRAF domain-like 93
HD-domain/PDEase-like Nucleotidyltransferase 94
P-loop containing nucleoside triphosphate hydrolases Ankyrin repeat 94
BRCT domain BRCT domain 97
FKBP-like TPR-like 94
CAD & PB1 domains Protein kinase-like (PK-like) 92
Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain SAICAR synthase-like 95
FAD-binding/transporter-associated domain-like CO dehydrogenase flavoprotein C-terminal domain-like 82
CO dehydrogenase ISP C-domain like FAD-binding/transporter-associated domain-like 82
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 81
CO dehydrogenase ISP C-domain like Molybdenum cofactor-binding domain 82
CO dehydrogenase molybdoprotein N-domain-like Molybdenum cofactor-binding domain 82
NTF2-like RNA-binding domain, RBD 82
HMA, heavy metal-associated domain HAD-like 86
"Winged helix" DNA-binding domain E2F-DP heterodimerization region 83
FAD-binding/transporter-associated domain-like Molybdenum cofactor-binding domain 82
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 86
Mannose-binding lectins Mannose-binding lectins 85
CO dehydrogenase ISP C-domain like CO dehydrogenase flavoprotein C-terminal domain-like 82
Eukaryotic type KH-domain (KH-domain type I) Nucleic acid-binding proteins 82
PLC-like phosphodiesterases PLC-like phosphodiesterases 82
Ankyrin repeat Protein kinase-like (PK-like) 81
Leukotriene A4 hydrolase N-terminal domain Metalloproteases ("zincins"), catalytic domain 85
Calponin-homology domain, CH-domain P-loop containing nucleoside triphosphate hydrolases 82
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 83
Families 57/38 glycoside transferase middle domain Galactose mutarotase-like 82
P-loop containing nucleoside triphosphate hydrolases DNA/RNA polymerases 87
CO dehydrogenase ISP C-domain like CO dehydrogenase molybdoprotein N-domain-like 82
6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 81
Glycoside hydrolase/deacetylase Families 57/38 glycoside transferase middle domain 82
PAZ domain RNase III domain-like 86
Metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 84
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 83
Glycoside hydrolase/deacetylase Galactose mutarotase-like 82
CO dehydrogenase flavoprotein C-terminal domain-like CO dehydrogenase molybdoprotein N-domain-like 82
Carbamate kinase-like ACT-like 82
FAD-binding/transporter-associated domain-like CO dehydrogenase molybdoprotein N-domain-like 82
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 83
Translational machinery components L30e-like 82
Ubiquitin-like Zn-binding ribosomal proteins 81
Bowman-Birk inhibitor, BBI Bowman-Birk inhibitor, BBI 82
CO dehydrogenase flavoprotein C-terminal domain-like Molybdenum cofactor-binding domain 82
NAD(P)-binding Rossmann-fold domains UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 81
Plant lectins/antimicrobial peptides Lysozyme-like 82
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 86
Nucleoside hydrolase Nucleoside hydrolase 73
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 72
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 73
Galactose mutarotase-like Glycosyl hydrolase domain 72
Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 74
ENT-like Tudor/PWWP/MBT 73
P-loop containing nucleoside triphosphate hydrolases Ribonuclease H-like 76
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 74
CAD & PB1 domains RING/U-box 72
Ribosomal L27 protein-like Eukaryotic type KH-domain (KH-domain type I) 71
NAD(P)-binding Rossmann-fold domains ACT-like 73
Peptidase/esterase 'gauge' domain alpha/beta-Hydrolases 72
Ribosomal L27 protein-like Nucleic acid-binding proteins 71
TPR-like Chaperone J-domain 73
F-box domain DPP6 N-terminal domain-like 72
PYP-like sensor domain (PAS domain) Galactose oxidase, central domain 72
UDP-Glycosyltransferase/glycogen phosphorylase UDP-Glycosyltransferase/glycogen phosphorylase 72
Ubiquitin-like BAG domain 73
Protein kinase-like (PK-like) DNA/RNA polymerases 77
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 75
ClpP/crotonase NAD(P)-binding Rossmann-fold domains 73
Homeodomain-like "Winged helix" DNA-binding domain 71
RNA-binding domain, RBD PABC (PABP) domain 73
RING/U-box Cysteine proteinases 75
PLP-dependent transferases PLP-dependent transferases 74
PYP-like sensor domain (PAS domain) F-box domain 72
F1F0 ATP synthase subunit C F1F0 ATP synthase subunit C 71
Retrovirus zinc finger-like domains L domain-like 77
beta-N-acetylhexosaminidase-like domain (Trans)glycosidases 72
NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains 73
EF-hand P-loop containing nucleoside triphosphate hydrolases 74
Translation initiation factor 2 beta, aIF2beta, N-terminal domain Zinc-binding domain of translation initiation factor 2 beta 72
alpha-D-mannose-specific plant lectins alpha-D-mannose-specific plant lectins 72
Voltage-gated potassium channels Periplasmic binding protein-like II 73
PP2C-like Protein kinase-like (PK-like) 73
RING/U-box WD40 repeat-like 75
PH domain-like GTPase activation domain, GAP 71
PLP-binding barrel Alanine racemase C-terminal domain-like 73
Protein kinase-like (PK-like) Ribonuclease H-like 77
Dimeric alpha+beta barrel Dimeric alpha+beta barrel 72
HLH, helix-loop-helix DNA-binding domain ACT-like 74
Actin depolymerizing proteins Actin depolymerizing proteins 75
P-loop containing nucleoside triphosphate hydrolases Retrovirus zinc finger-like domains 76
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 75
GST C-terminal domain-like eEF1-gamma domain 72
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 63
Zn-dependent exopeptidases Transferrin receptor-like dimerisation domain 62
t-snare proteins SNARE fusion complex 63
2Fe-2S ferredoxin-like Molybdenum cofactor-binding domain 61
P-loop containing nucleoside triphosphate hydrolases dsRNA-binding domain-like 66
tRNA-binding arm Class II aaRS and biotin synthetases 62
Transducin (alpha subunit), insertion domain P-loop containing nucleoside triphosphate hydrolases 63
ARID-like FYVE/PHD zinc finger 61
Ricin B-like lectins Ricin B-like lectins 63
PAZ domain dsRNA-binding domain-like 65
DNA/RNA polymerases Polo-box domain 64
RING/U-box Ran binding protein zinc finger-like 63
GAF domain-like CheY-like 63
Chromo domain-like Chromo domain-like 65
Ubiquitin-like Homeodomain-like 61
PEP carboxykinase N-terminal domain PEP carboxykinase-like 62
Cysteine proteinases Formin homology 2 domain (FH2 domain) 61
N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 Translational machinery components 61
UBC-like RING/U-box 65
SNARE-like Domain of the SRP/SRP receptor G-proteins 61
N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 L30e-like 61
TPR-like Thioredoxin-like 64
Zinc beta-ribbon Cyclin-like 63
Amine oxidase N-terminal region Amine oxidase N-terminal region 63
Rap30/74 interaction domains "Winged helix" DNA-binding domain 62
Saposin Saposin 61
(Phosphotyrosine protein) phosphatases II C2 domain (Calcium/lipid-binding domain, CaLB) 64
2Fe-2S ferredoxin-like FAD-binding/transporter-associated domain-like 61
cAMP-binding domain-like Ankyrin repeat 64
2Fe-2S ferredoxin-like CO dehydrogenase ISP C-domain like 61
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 61
P-loop containing nucleoside triphosphate hydrolases PH domain-like 62
F-box domain Ribonuclease H-like 66
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Adenine nucleotide alpha hydrolases-like 62
ClpP/crotonase 6-phosphogluconate dehydrogenase C-terminal domain-like 62
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 65
PA domain RING/U-box 62
2Fe-2S ferredoxin-like alpha-helical ferredoxin 62
ARM repeat C2 domain (Calcium/lipid-binding domain, CaLB) 63
N-terminal, heterodimerisation domain of RBP7 (RpoE) Nucleic acid-binding proteins 62
Translation proteins Initiation factor IF2/eIF5b, domain 3 65
Voltage-gated potassium channels EF-hand 63
POZ domain POZ domain 65
2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain Alkaline phosphatase-like 62
CCCH zinc finger Eukaryotic type KH-domain (KH-domain type I) 62
ARM repeat Sec7 domain 64
HCP-like HCP-like 64
Glutathione synthetase ATP-binding domain-like Succinyl-CoA synthetase domains 61
FYVE/PHD zinc finger SET domain 65
2Fe-2S ferredoxin-like CO dehydrogenase molybdoprotein N-domain-like 61
SNARE-like P-loop containing nucleoside triphosphate hydrolases 61
2Fe-2S ferredoxin-like CO dehydrogenase flavoprotein C-terminal domain-like 61
SET domain RuBisCo LSMT C-terminal, substrate-binding domain 62
Starch-binding domain-like Galactose-binding domain-like 64
Sec63 N-terminal domain-like E set domains 64
Aldolase NAD(P)-binding Rossmann-fold domains 63
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 52
Nucleotidylyl transferase Nucleotidylyl transferase 51
Cdc48 domain 2-like P-loop containing nucleoside triphosphate hydrolases 53
Chromo domain-like P-loop containing nucleoside triphosphate hydrolases 54
TPR-like CAD & PB1 domains 52
Rudiment single hybrid motif Cytochrome f subunit of the cytochrome b6f complex, transmembrane anchor 51
Retrovirus zinc finger-like domains Cysteine proteinases 55
P-loop containing nucleoside triphosphate hydrolases RNase III domain-like 54
Cytochrome f, large domain Cytochrome f subunit of the cytochrome b6f complex, transmembrane anchor 51
Zinc beta-ribbon Zinc beta-ribbon 51
POZ domain TAZ domain 52
Transcription factor IIA (TFIIA), alpha-helical domain Transcription factor IIA (TFIIA), beta-barrel domain 52
PYP-like sensor domain (PAS domain) GAF domain-like 52
Tudor/PWWP/MBT FYVE/PHD zinc finger 53
WW domain P-loop containing nucleoside triphosphate hydrolases 51
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 52
Starch-binding domain-like P-loop containing nucleoside triphosphate hydrolases 52
RCC1/BLIP-II Protein kinase-like (PK-like) 54
Class II aaRS and biotin synthetases C-terminal domain of ProRS 51
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 53
Acetyl-CoA synthetase-like ACP-like 52
Methionyl-tRNA synthetase (MetRS), Zn-domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 54
P-loop containing nucleoside triphosphate hydrolases PAZ domain 54
L domain-like Outer arm dynein light chain 1 55
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 52
TAZ domain FYVE/PHD zinc finger 53
Ribonuclease H-like Cysteine proteinases 55
Thioredoxin-like Cysteine-rich domain 53
GAF domain-like GAF domain-like 52
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 53
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 52
ARM repeat Subdomain of clathrin and coatomer appendage domain 52
Ribonuclease H-like RNI-like 55
MIT domain P-loop containing nucleoside triphosphate hydrolases 51
Periplasmic binding protein-like II ACT-like 53
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 51
Hermes dimerisation domain Ribonuclease H-like 54
Arp2/3 complex subunits Arp2/3 complex subunits 52
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 52
Class II aaRS ABD-related C-terminal domain of ProRS 51
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 55
DPP6 N-terminal domain-like WD40 repeat-like 53
Chaperone J-domain 4Fe-4S ferredoxins 53
PUA domain-like Ribosomal protein S5 domain 2-like 53
Chaperone J-domain CSL zinc finger 51
Concanavalin A-like lectins/glucanases Concanavalin A-like lectins/glucanases 55
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 53
(Trans)glycosidases Ricin B-like lectins 53
LysM domain Protein kinase-like (PK-like) 53
Actin-crosslinking proteins (Trans)glycosidases 52
Oxidoreductase molybdopterin-binding domain E set domains 53
Nitrite/Sulfite reductase N-terminal domain-like Nitrite/Sulfite reductase N-terminal domain-like 52
(Phosphotyrosine protein) phosphatases II E set domains 52
Aldolase Aminoacid dehydrogenase-like, N-terminal domain 52
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 54
CheY-like CheY-like 53
Nucleotidylyl transferase Ribosomal protein L25-like 52
P-loop containing nucleoside triphosphate hydrolases Phosphoglycerate mutase-like 52
Glutathione synthetase ATP-binding domain-like Phosphoenolpyruvate/pyruvate domain 52
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 53
Amine oxidase N-terminal region Amine oxidase catalytic domain 52
P-loop containing nucleoside triphosphate hydrolases Mannose-binding lectins 53
GroEL-intermediate domain like SAICAR synthase-like 51
P-loop containing nucleoside triphosphate hydrolases RNA-binding domain, RBD 54
Ribosomal protein L6 Ribosomal protein L6 52
L domain-like Mannose-binding lectins 53
Cysteine-rich domain NAD kinase/diacylglycerol kinase-like 52
RNI-like DNA/RNA polymerases 55
Starch-binding domain-like Phosphoglycerate mutase-like 52
YrdC/RibB RibA-like 53
Nitrite and sulphite reductase 4Fe-4S domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 52
WD40 repeat-like Quinoprotein alcohol dehydrogenase-like 53
PriA/YqbF domain GINS helical bundle-like 52
TPR-like "Winged helix" DNA-binding domain 51
RBP11-like subunits of RNA polymerase C-terminal domain of RNA polymerase alpha subunit 52
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 53
E set domains CBS-domain pair 51
EF-hand Mitochondrial carrier 51
Thioredoxin-like Ubiquitin-like 53
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 52
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleotidylyl transferase 54
Voltage-gated potassium channels Ankyrin repeat 53
Sec63 N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 54
BEACH domain WD40 repeat-like 55
ClpP/crotonase ClpP/crotonase 54
6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 52
Clathrin adaptor appendage domain Subdomain of clathrin and coatomer appendage domain 52
FYVE/PHD zinc finger P-loop containing nucleoside triphosphate hydrolases 55
Galactose mutarotase-like Galactose-binding domain-like 53
Eukaryotic RPB5 N-terminal domain RPB5-like RNA polymerase subunit 52
Cysteine proteinases P-loop containing nucleoside triphosphate hydrolases 53
SBT domain Ankyrin repeat 51
PRTase-like PRTase-like 52
Galactose-binding domain-like NAD(P)-binding Rossmann-fold domains 51
ARM repeat DNA/RNA polymerases 55
HAD-like dsRNA-binding domain-like 52
Cytochrome f, large domain Rudiment single hybrid motif 51
Cysteine proteinases Granulin repeat 52
TAZ domain RING/U-box 53
Chelatase Chlorophyll a-b binding protein 52
WRKY DNA-binding domain Ribonuclease H-like 41
ARID-like HSP20-like chaperones 41
PLC-like phosphodiesterases C2 domain (Calcium/lipid-binding domain, CaLB) 43
ThrRS/AlaRS common domain Class II aaRS and biotin synthetases 43
CBS-domain pair CAD & PB1 domains 42
Cryptochrome/photolyase, N-terminal domain alpha/beta-Hydrolases 41
PRP4-like Functional domain of the splicing factor Prp18 42
Thioredoxin-like ERP29 C domain-like 41
ARM repeat Ribonuclease H-like 44
FAD/NAD(P)-binding domain EF-hand 42
CCCH zinc finger RING/U-box 43
Serine metabolism enzymes domain ACT-like 42
NAD(P)-binding Rossmann-fold domains Serine metabolism enzymes domain 42
WRKY DNA-binding domain beta-beta-alpha zinc fingers 41
ADC-like Cdc48 domain 2-like 42
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 44
Acetyl-CoA synthetase-like Quinoprotein alcohol dehydrogenase-like 41
Galactose oxidase, central domain E set domains 42
4Fe-4S ferredoxins P-loop containing nucleoside triphosphate hydrolases 42
RNA-binding domain, RBD WW domain 41
Cytochrome c Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor 41
LEA14-like LEA14-like 41
Flavoproteins Riboflavin synthase domain-like 43
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 41
P-loop containing nucleoside triphosphate hydrolases Smc hinge domain 43
Kelch motif Tropomyosin 41
Zinc-binding domain of translation initiation factor 2 beta ARM repeat 41
Aminopeptidase/glucanase lid domain Zn-dependent exopeptidases 42
LysM domain LysM domain 42
Fe-S cluster assembly (FSCA) domain-like Fe-S cluster assembly (FSCA) domain-like 41
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 43
Actin depolymerizing proteins C-terminal, gelsolin-like domain of Sec23/24 43
UBA-like PUG domain-like 42
ARM repeat "Winged helix" DNA-binding domain 42
HAD-like Glycerol-3-phosphate (1)-acyltransferase 41
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 41
Thioredoxin-like "Winged helix" DNA-binding domain 41
P-loop containing nucleoside triphosphate hydrolases ARM repeat 42
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 41
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 41
Rudiment single hybrid motif N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) 41
Glutathione synthetase ATP-binding domain-like N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) 41
C2 domain (Calcium/lipid-binding domain, CaLB) Protein kinase-like (PK-like) 41
ARM repeat Tudor/PWWP/MBT 44
F-box domain HCP-like 42
RING/U-box Homeodomain-like 42
Translation initiation factor 2 beta, aIF2beta, N-terminal domain ARM repeat 41
4'-phosphopantetheinyl transferase 4'-phosphopantetheinyl transferase 43
alpha-ketoacid dehydrogenase kinase, N-terminal domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 41
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 41
Protein kinase-like (PK-like) Cysteine proteinases 44
RING/U-box RNA-binding domain, RBD 43
Chaperone J-domain Thioredoxin-like 42
WW domain WW domain 44
POZ domain TPR-like 43
Protein kinase-like (PK-like) PapD-like 43
SWIB/MDM2 domain Plus3-like 44
Nucleotidyltransferase Poly A polymerase C-terminal region-like 43
Homeodomain-like FAD-linked reductases, C-terminal domain 42
ADC-like P-loop containing nucleoside triphosphate hydrolases 42
PH domain-like BEACH domain 44
Rad51 N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 41
P-loop containing nucleoside triphosphate hydrolases PRTase-like 41
UraD-Like Transthyretin (synonym: prealbumin) 42
PreATP-grasp domain N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) 41
Flavoproteins Ferredoxin reductase-like, C-terminal NADP-linked domain 43
Homeodomain-like FAD/NAD(P)-binding domain 42
TRAF domain-like TRAF domain-like 44
Kelch motif Metallo-dependent phosphatases 41
HAD-like BRCT domain 44
UROD/MetE-like UROD/MetE-like 41
ACP-like Quinoprotein alcohol dehydrogenase-like 41
P-loop containing nucleoside triphosphate hydrolases TGS-like 43
PA domain Zn-dependent exopeptidases 42
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 44
Galactose mutarotase-like Starch-binding domain-like 42
Acyl-CoA dehydrogenase C-terminal domain-like Acyl-CoA dehydrogenase C-terminal domain-like 42
BAR/IMD domain-like SH3-domain 42
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 41
Myosin rod fragments DNA/RNA polymerases 43
Voltage-gated potassium channels Voltage-gated potassium channels 42
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 42
WGR domain-like Domain of poly(ADP-ribose) polymerase 44
P-loop containing nucleoside triphosphate hydrolases Hypothetical protein YjiA, C-terminal domain 41
DNA-binding domain DNA-binding pseudobarrel domain 43
Protein kinase-like (PK-like) Retrovirus zinc finger-like domains 44
Myosin rod fragments Ribonuclease H-like 43
F-box domain DNA/RNA polymerases 44
Protein kinase-like (PK-like) Mannose-binding lectins 43
HCP-like HIT/MYND zinc finger-like 42
F-box domain YWTD domain 31
PH domain-like HMG-box 31
MOSC N-terminal domain-like PK beta-barrel domain-like 32
Formate/glycerate dehydrogenase catalytic domain-like ACT-like 31
BAR/IMD domain-like PH domain-like 32
Pseudouridine synthase Pseudouridine synthase 33
Ran binding protein zinc finger-like EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 31
CRAL/TRIO N-terminal domain Supernatant protein factor (SPF), C-terminal domain 32
Protein kinase-like (PK-like) (Phosphotyrosine protein) phosphatases II 32
Heat shock protein 70kD (HSP70), C-terminal subdomain Heat shock protein 70kD (HSP70), C-terminal subdomain 31
F-box domain beta-beta-alpha zinc fingers 33
E set domains RNA-binding domain, RBD 31
Tetrahydrobiopterin biosynthesis enzymes-like Tetrahydrobiopterin biosynthesis enzymes-like 32
Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 32
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FMN-linked oxidoreductases 33
Oxidoreductase molybdopterin-binding domain Ferredoxin reductase-like, C-terminal NADP-linked domain 32
RING/U-box UBA-like 32
Oxidoreductase molybdopterin-binding domain Cytochrome b5-like heme/steroid binding domain 32
TRAF domain-like Cysteine proteinases 32
Glutathione synthetase ATP-binding domain-like Phosphoglycerate mutase-like 32
HD-domain/PDEase-like EF-hand 31
P-loop containing nucleoside triphosphate hydrolases beta-beta-alpha zinc fingers 33
DAK1/DegV-like DhaL-like 32
Trimeric LpxA-like enzymes Trimeric LpxA-like enzymes 32
Metalloproteases ("zincins"), catalytic domain Metalloproteases ("zincins"), catalytic domain 33
Tudor/PWWP/MBT SET domain 32
beta-sandwich domain of Sec23/24 RNA-binding domain, RBD 31
F-box domain ApaG-like 32
Ran binding protein zinc finger-like Translation proteins 31
Adenine nucleotide alpha hydrolases-like Molybdenum cofactor biosynthesis proteins 31
Translation proteins ThrRS/AlaRS common domain 32
Myosin rod fragments Acid proteases 32
Protease propeptides/inhibitors Subtilisin-like 32
HAD-like NTF2-like 31
CCCH zinc finger WD40 repeat-like 31
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Alpha subunit of glutamate synthase, C-terminal domain 33
Rhodanese/Cell cycle control phosphatase Rhodanese/Cell cycle control phosphatase 32
F-box domain WD40 repeat-like 32
S-adenosyl-L-methionine-dependent methyltransferases Formin homology 2 domain (FH2 domain) 31
Carbamate kinase-like ALDH-like 31
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 33
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 33
E set domains AMPKBI-like 31
Tudor/PWWP/MBT RNA-binding domain, RBD 31
FF domain FF domain 32
E set domains Cytochrome b5-like heme/steroid binding domain 32
GAT-like domain F-box domain 31
HIT/MYND zinc finger-like Cysteine proteinases 31
P-loop containing nucleoside triphosphate hydrolases HAND domain of the nucleosome remodeling ATPase ISWI 31
Calcium ATPase, transmembrane domain M Calcium ATPase, transmembrane domain M 32
DNase I-like EF-hand 33
PX domain BAR/IMD domain-like 33
Cyclophilin-like TPR-like 31
Cysteine proteinases L domain-like 33
ACT-like Formyltransferase 31
Adenine nucleotide alpha hydrolases-like Cullin repeat-like 31
BRCT domain DNA/RNA polymerases 31
Formate/glycerate dehydrogenase catalytic domain-like Serine metabolism enzymes domain 31
Protein kinase-like (PK-like) NTF2-like 32
TPR-like Ribonuclease H-like 33
S-adenosyl-L-methionine-dependent methyltransferases PLP-dependent transferases 32
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 33
WD40 repeat-like C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase 31
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 31
Glutathione synthetase ATP-binding domain-like Single hybrid motif 33
PUA domain-like Nucleotidylyl transferase 32
FMN-linked oxidoreductases Alpha subunit of glutamate synthase, C-terminal domain 33
Nucleotidyltransferase EF-hand 31
GST C-terminal domain-like Nucleotidylyl transferase 31
ATP-dependent DNA ligase DNA-binding domain DNA ligase/mRNA capping enzyme, catalytic domain 32
NAC domain Ribonuclease H-like 31
PLP-dependent transferases Ornithine decarboxylase C-terminal domain 32
ArfGap/RecO-like zinc finger Ankyrin repeat 32
C-terminal, gelsolin-like domain of Sec23/24 VHP, Villin headpiece domain 32
Ribonuclease H-like Eukaryotic type KH-domain (KH-domain type I) 31
Polo-box domain Ribonuclease H-like 32
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 32
E set domains Riboflavin synthase domain-like 32
Domain of poly(ADP-ribose) polymerase ADP-ribosylation 33
GroEL-intermediate domain like GroEL-intermediate domain like 32
Eukaryotic type KH-domain (KH-domain type I) LigT-like 31
PH domain-like ArfGap/RecO-like zinc finger 32
Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 Elongation factor TFIIS domain 2 31
Staphylococcal nuclease Tudor/PWWP/MBT 32
Dom34/Pelota N-terminal domain-like Translational machinery components 32
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 32
Rudiment single hybrid motif Single hybrid motif 33
P-loop containing nucleoside triphosphate hydrolases CYTH-like phosphatases 32
Myosin rod fragments Retrovirus zinc finger-like domains 32
Actin depolymerizing proteins VHP, Villin headpiece domain 32
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 32
Creatinase/aminopeptidase "Winged helix" DNA-binding domain 32
DNase I-like DNase I-like 32
Nucleic acid-binding proteins Retrovirus zinc finger-like domains 33
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 31
ISP domain Chlorophyll a-b binding protein 31
Nucleic acid-binding proteins "Winged helix" DNA-binding domain 33
GST C-terminal domain-like eEF-1beta-like 32
Sec63 N-terminal domain-like "Winged helix" DNA-binding domain 32
BRCT domain Lesion bypass DNA polymerase (Y-family), little finger domain 31
6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK Dihydropteroate synthetase-like 31
Ribonuclease H-like HRDC-like 31
Cytochrome b5-like heme/steroid binding domain Riboflavin synthase domain-like 32
Acyl-CoA binding protein Kelch motif 32
Oxidoreductase molybdopterin-binding domain Riboflavin synthase domain-like 32
Toll/Interleukin receptor TIR domain P-loop containing nucleoside triphosphate hydrolases 32
RING/U-box BRCT domain 32
BAR/IMD domain-like ArfGap/RecO-like zinc finger 32
Metalloproteases ("zincins"), catalytic domain HAD-like 31
CRAL/TRIO domain Supernatant protein factor (SPF), C-terminal domain 32
GAT-like domain Galactose oxidase, central domain 31
WGR domain-like ADP-ribosylation 33
beta-beta-alpha zinc fingers Hermes dimerisation domain 32
Sec63 N-terminal domain-like Sec63 N-terminal domain-like 32
Starch-binding domain-like Nucleic acid-binding proteins 31
NagB/RpiA/CoA transferase-like D-ribose-5-phosphate isomerase (RpiA), lid domain 31
TPR-like RNA-binding domain, RBD 32
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 32
HAD-like Riboflavin kinase-like 31
Concanavalin A-like lectins/glucanases DNA/RNA polymerases 33
PreATP-grasp domain Single hybrid motif 33
PA domain Transferrin receptor-like dimerisation domain 31
PH domain-like Ankyrin repeat 32
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 31
Cytochrome P450 Cytochrome P450 32
Chromo domain-like Protein kinase-like (PK-like) 33
PH domain-like WD40 repeat-like 33
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 31
RuBisCO, large subunit, small (N-terminal) domain RuBisCo, C-terminal domain 32
SWIB/MDM2 domain SWIB/MDM2 domain 32
TPR-like Cysteine proteinases 31
Galactose-binding domain-like Glycosyl hydrolase domain 31
CoA-dependent acyltransferases CoA-dependent acyltransferases 31
SMI1/KNR4-like ApaG-like 32
Carbamate kinase-like NAD(P)-binding Rossmann-fold domains 31
BAR/IMD domain-like Ankyrin repeat 32
FYVE/PHD zinc finger SWIB/MDM2 domain 33
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 32
PH domain-like Oxysterol-binding protein-like 31
Thioredoxin-like eEF1-gamma domain 31
Plus3-like GYF domain 33
RING/U-box Formin homology 2 domain (FH2 domain) 32
F-box domain SMI1/KNR4-like 32
Bactericidal permeability-increasing protein, BPI Bactericidal permeability-increasing protein, BPI 31
SWIB/MDM2 domain GYF domain 33
SAP domain FYVE/PHD zinc finger 32
Thiamin pyrophosphokinase, catalytic domain Thiamin pyrophosphokinase, substrate-binding domain 31
Thioredoxin-like FAD-dependent thiol oxidase 31
Hypothetical protein c14orf129, hspc210 TPR-like 32
TPR-like DNA/RNA polymerases 33
F-box domain YVTN repeat-like/Quinoprotein amine dehydrogenase 31
ATP-dependent DNA ligase DNA-binding domain Nucleic acid-binding proteins 32
GST C-terminal domain-like Ribosomal protein L25-like 31
Acid proteases Protein kinase-like (PK-like) 33
FYVE/PHD zinc finger Plus3-like 33
RNI-like WD40 repeat-like 32
Alpha-L RNA-binding motif Pseudouridine synthase 32
PurM N-terminal domain-like PurM C-terminal domain-like 32
ACT-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 31
Rhomboid-like UBA-like 31
Carbamate kinase-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 31
Cytochrome b5-like heme/steroid binding domain Ferredoxin reductase-like, C-terminal NADP-linked domain 32
PH domain-like Bet v1-like 33
Aconitase iron-sulfur domain LeuD/IlvD-like 32
PGBD-like Metalloproteases ("zincins"), catalytic domain 31
F-box domain HIT/MYND zinc finger-like 31
SMAD/FHA domain PP2C-like 31
Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 Zinc beta-ribbon 31
P-loop containing nucleoside triphosphate hydrolases WD40 repeat-like 32
HAND domain of the nucleosome remodeling ATPase ISWI Homeodomain-like 31
Surp module (SWAP domain) Surp module (SWAP domain) 32
FYVE/PHD zinc finger Homeodomain-like 32
Staphylococcal nuclease Staphylococcal nuclease 32
Elongation factor TFIIS domain 2 Zinc beta-ribbon 31
Ran binding protein zinc finger-like P-loop containing nucleoside triphosphate hydrolases 31
"Winged helix" DNA-binding domain E set domains 32
(Phosphotyrosine protein) phosphatases II Actin depolymerizing proteins 32
ARM repeat BEACH domain 33
Tropomyosin Mitotic arrest deficient-like 1, Mad1 31
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 32
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 31
ARID-like HMG-box 32
E set domains Ferredoxin reductase-like, C-terminal NADP-linked domain 32
SMAD/FHA domain BRCT domain 21
Restriction endonuclease-like RuvA domain 2-like 22
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FAD/NAD(P)-binding domain 22
PreATP-grasp domain PreATP-grasp domain 22
Ribokinase-like Thiamin phosphate synthase 21
PurM N-terminal domain-like PurM N-terminal domain-like 21
TATA-box binding protein-like DNA-glycosylase 21
Concanavalin A-like lectins/glucanases Nucleotide-diphospho-sugar transferases 21
POZ domain Galactose-binding domain-like 21
ThrRS/AlaRS common domain Class II aaRS ABD-related 22
Cysteine proteinases Subtilisin-like 22
PAH2 domain PAH2 domain 22
L domain-like Ubiquitin-like 22
(Phosphotyrosine protein) phosphatases II DNA ligase/mRNA capping enzyme, catalytic domain 22
R1 subunit of ribonucleotide reductase, N-terminal domain PFL-like glycyl radical enzymes 21
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 21
C-terminal domain of alpha and beta subunits of F1 ATP synthase Epsilon subunit of F1F0-ATP synthase N-terminal domain 21
L domain-like DNA-glycosylase 21
TPR-like SET domain 21
PP2C-like PP2C-like 21
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 22
HAD-like HAD-like 21
CCCH zinc finger HIT-like 21
Prismane protein-like P-loop containing nucleoside triphosphate hydrolases 21
Ubiquitin-like TPR-like 22
Purple acid phosphatase, N-terminal domain Ornithine decarboxylase C-terminal domain 21
WD40 repeat-like Cyclophilin-like 22
FYSH domain Hypothetical protein AF0491, middle domain 21
Metallo-dependent hydrolases Glutamine synthetase/guanido kinase 21
BRCT domain Domain of poly(ADP-ribose) polymerase 22
Ankyrin repeat CCCH zinc finger 21
"Winged helix" DNA-binding domain Ribonuclease H-like 22
(Trans)glycosidases Chitinase insertion domain 21
ARM repeat Hect, E3 ligase catalytic domain 22
DNA-glycosylase Nudix 22
Class II aaRS and biotin synthetases Translation proteins 21
cAMP-binding domain-like Protein kinase-like (PK-like) 21
AN1-like Zinc finger AN1-like Zinc finger 22
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 22
ARM repeat TPR-like 22
FGAM synthase PurL, linker domain Class I glutamine amidotransferase-like 21
PH domain-like "Winged helix" DNA-binding domain 22
P-loop containing nucleoside triphosphate hydrolases Macro domain-like 22
Nucleic acid-binding proteins eIF-2-alpha, C-terminal domain 21
Ubiquitin-like Cap-Gly domain 22
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 22
Cyclophilin-like RNA-binding domain, RBD 22
DNA polymerase beta, N-terminal domain-like PsbU/PolX domain-like 21
Cullin repeat-like UDP-Glycosyltransferase/glycogen phosphorylase 21
Dom34/Pelota N-terminal domain-like L30e-like 21
alpha-helical ferredoxin FAD/NAD(P)-binding domain 22
PUA domain-like S-adenosyl-L-methionine-dependent methyltransferases 22
Cytidine deaminase-like Dihydrofolate reductase-like 21
FYVE/PHD zinc finger Ankyrin repeat 21
Adenine nucleotide alpha hydrolases-like Thioredoxin-like 21
FYVE/PHD zinc finger GYF domain 22
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 22
beta-Galactosidase/glucuronidase domain (Trans)glycosidases 22
UDP-Glycosyltransferase/glycogen phosphorylase GHMP Kinase, C-terminal domain 21
Ubiquitin-like PUG domain-like 22
Cytochrome P450 DNA/RNA polymerases 22
CAD & PB1 domains UBA-like 21
P-loop containing nucleoside triphosphate hydrolases RuvA domain 2-like 21
beta-Galactosidase/glucuronidase domain beta-Galactosidase/glucuronidase domain 22
Ubiquitin-like HAD-like 21
C-terminal, gelsolin-like domain of Sec23/24 C-terminal, gelsolin-like domain of Sec23/24 21
beta-beta-alpha zinc fingers L domain-like 22
Calponin-homology domain, CH-domain EB1 dimerisation domain-like 22
Single hybrid motif ClpP/crotonase 22
Retrovirus zinc finger-like domains F-box domain 22
(Trans)glycosidases (Trans)glycosidases 22
FYVE/PHD zinc finger SAICAR synthase-like 22
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 21
Nucleic acid-binding proteins eIF2alpha middle domain-like 21
PurS-like PurM N-terminal domain-like 21
Formiminotransferase domain of formiminotransferase-cyclodeaminase. Formiminotransferase domain of formiminotransferase-cyclodeaminase. 21
Ribonuclease H-like DNA-binding pseudobarrel domain 22
Concanavalin A-like lectins/glucanases Ribonuclease H-like 22
BRCT domain FYVE/PHD zinc finger 22
F-box domain RING/U-box 22
Formate/glycerate dehydrogenase catalytic domain-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 21
Dihydrofolate reductase-like Thymidylate synthase/dCMP hydroxymethylase 21
UBA-like Thioredoxin-like 21
FGAM synthase PurL, linker domain PurM N-terminal domain-like 21
P-loop containing nucleoside triphosphate hydrolases Glucocorticoid receptor-like (DNA-binding domain) 21
PurM C-terminal domain-like Class I glutamine amidotransferase-like 21
Carbon-nitrogen hydrolase Adenine nucleotide alpha hydrolases-like 22
Macro domain-like Zn-dependent exopeptidases 22
FMN-linked oxidoreductases alpha-helical ferredoxin 22
FMN-linked oxidoreductases FMN-linked oxidoreductases 22
SMAD/FHA domain Phospholipase D/nuclease 22
Serpins Serpins 22
Clavaminate synthase-like beta-beta-alpha zinc fingers 22
F-box domain Quinoprotein alcohol dehydrogenase-like 22
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 22
Cysteine proteinases Cytochrome P450 22
PHL pollen allergen PHL pollen allergen 21
PurM C-terminal domain-like PurM C-terminal domain-like 21
P-loop containing nucleoside triphosphate hydrolases Protein kinase-like (PK-like) 22
FKBP-like Rhodanese/Cell cycle control phosphatase 22
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 22
Galactose-binding domain-like beta-Galactosidase/glucuronidase domain 22
FAD/NAD(P)-binding domain HI0933 insert domain-like 21
Retrovirus zinc finger-like domains RING/U-box 22
PheT/TilS domain Class II aaRS and biotin synthetases 22
C2 domain (Calcium/lipid-binding domain, CaLB) vWA-like 21
Cysteine proteinases Galactose-binding domain-like 21
FYVE/PHD zinc finger PUA domain-like 22
Pseudouridine synthase PUA domain-like 21
Translation proteins PRC-barrel domain 21
SAP domain RNA-binding domain, RBD 21
L30e-like alpha/beta knot 21
Second domain of FERM Prismane protein-like 21
Rudiment single hybrid motif ClpP/crotonase 22
Metallo-dependent hydrolases Glutamine synthetase, N-terminal domain 21
4Fe-4S ferredoxins DNA/RNA polymerases 21
DPP6 N-terminal domain-like Tricorn protease domain 2 21
F-box domain Clavaminate synthase-like 22
Chaperone J-domain E set domains 21
F-box domain Tricorn protease domain 2 21
Cysteine proteinases Mannose-binding lectins 22
Acid proteases Acid proteases 22
ENT-like ENT-like 21
Translational machinery components Insert subdomain of RNA polymerase alpha subunit 22
Cytidine deaminase-like Cytidine deaminase-like 21
BRCT domain Nucleotidyltransferase 21
TPR-like Metallo-dependent phosphatases 21
Concanavalin A-like lectins/glucanases Acid proteases 22
N-terminal nucleophile aminohydrolases (Ntn hydrolases) alpha-helical ferredoxin 22
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 21
Ankyrin repeat Ubiquitin-like 22
Translational machinery components Nucleotide-diphospho-sugar transferases 21
PRTase-like Ribulose-phoshate binding barrel 21
(Phosphotyrosine protein) phosphatases II Nucleic acid-binding proteins 22
Molybdenum cofactor biosynthesis proteins MoeA C-terminal domain-like 21
Arabinanase/levansucrase/invertase Nucleotide-diphospho-sugar transferases 21
DUSP-like Cysteine proteinases 22
Glutamine synthetase/guanido kinase GatB/YqeY motif 21
FYVE/PHD zinc finger GroEL apical domain-like 22
PH domain-like ARM repeat 22
Second domain of FERM P-loop containing nucleoside triphosphate hydrolases 21
Riboflavin synthase domain-like Riboflavin synthase domain-like 21
C-type lectin-like Protein kinase-like (PK-like) 21
Cysteine proteinases UDP-Glycosyltransferase/glycogen phosphorylase 22
Galactose oxidase, central domain Kelch motif 22
L9 N-domain-like Ribosomal protein L9 C-domain 21
CarD-like TRCF domain-like 22
Chaperone J-domain Sec63 N-terminal domain-like 21
Subtilisin-like Retrovirus zinc finger-like domains 22
ISP transmembrane anchor ISP domain 21
Subtilisin-like DNA/RNA polymerases 22
Aspartate/glutamate racemase Aspartate/glutamate racemase 22
BRCT domain PsbU/PolX domain-like 21
TPR-like RNI-like 22
Cysteine proteinases Ankyrin repeat 22
BRCT domain ADP-ribosylation 22
Nucleic acid-binding proteins S-adenosyl-L-methionine-dependent methyltransferases 21
Domain of the SRP/SRP receptor G-proteins Signal peptide-binding domain 21
F-box domain RNA-binding domain, RBD 21
BRCT domain WGR domain-like 22
P-loop containing nucleoside triphosphate hydrolases Cysteine-rich domain 21
P-loop containing nucleoside triphosphate hydrolases HRDC-like 22
EF-hand PLC-like phosphodiesterases 22
PH domain-like Phospholipase D/nuclease 21
UDP-Glycosyltransferase/glycogen phosphorylase Ribosomal protein S5 domain 2-like 21
Actin-like ATPase domain AF1104-like 22
NAD-binding domain of HMG-CoA reductase Substrate-binding domain of HMG-CoA reductase 21
P-loop containing nucleoside triphosphate hydrolases (Trans)glycosidases 22
FMN-linked oxidoreductases FAD/NAD(P)-binding domain 22
Diaminopimelate epimerase-like Diaminopimelate epimerase-like 21
Surp module (SWAP domain) Ubiquitin-like 21
Molybdenum cofactor biosynthesis proteins Molybdenum cofactor biosynthesis proteins 21
Metallo-dependent phosphatases PLP-dependent transferases 21
Myosin rod fragments Chromo domain-like 22
Oxygen-evolving enhancer protein 3, Cyclophilin-like 21
GYF domain RNA-binding domain, RBD 21
Protein kinase-like (PK-like) TATA-box binding protein-like 21
Subtilisin-like Ribonuclease H-like 22
Ankyrin repeat RNA-binding domain, RBD 22
PapD-like Ankyrin repeat 22
HAD-like Thioredoxin-like 22
Activator of Hsp90 ATPase, Aha1 Bet v1-like 21
beta-sandwich domain of Sec23/24 P-loop containing nucleoside triphosphate hydrolases 21
P-loop containing nucleoside triphosphate hydrolases DNase I-like 22
Concanavalin A-like lectins/glucanases BEACH domain 22
Putative DNA-binding domain Class II aaRS and biotin synthetases 22
Chromo domain-like S-adenosyl-L-methionine-dependent methyltransferases 22
Nucleic acid-binding proteins S15/NS1 RNA-binding domain 21
PsbU/PolX domain-like Nucleotidyltransferase 21
P-loop containing nucleoside triphosphate hydrolases Epsilon subunit of F1F0-ATP synthase N-terminal domain 21
PH domain-like Prismane protein-like 21
Fumarylacetoacetate hydrolase, FAH, N-terminal domain FAH 21
cAMP-binding domain-like cAMP-binding domain-like 21
FYVE/PHD zinc finger Chromo domain-like 22
PDZ domain-like ClpP/crotonase 21
PP2C-like cAMP-binding domain-like 21
TATA-box binding protein-like TATA-box binding protein-like 22
Acid proteases L domain-like 22
Glutathione synthetase ATP-binding domain-like ClpP/crotonase 22
P-loop containing nucleoside triphosphate hydrolases Bromodomain 22
PurS-like PurM C-terminal domain-like 21
L domain-like TATA-box binding protein-like 21
CarD-like P-loop containing nucleoside triphosphate hydrolases 22
WD40 repeat-like DNase I-like 22
Outer arm dynein light chain 1 Protein kinase-like (PK-like) 22
Alpha subunit of glutamate synthase, C-terminal domain FAD/NAD(P)-binding domain 22
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 21
Cysteine proteinases DNase I-like 22
Protein kinase-like (PK-like) Acyl-CoA dehydrogenase NM domain-like 22
RING/U-box PUA domain-like 22
Ribonuclease H-like RING/U-box 22
Leukotriene A4 hydrolase N-terminal domain ARM repeat 22
L domain-like Cysteine-rich domain 21
PurM N-terminal domain-like Class I glutamine amidotransferase-like 21
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 21
"Winged helix" DNA-binding domain DNA/RNA polymerases 22
alpha/beta knot Nucleic acid-binding proteins 22
Protein kinase-like (PK-like) beta-lactamase/transpeptidase-like 21
eIF2alpha middle domain-like eIF-2-alpha, C-terminal domain 21
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 21
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 21
ARM repeat POZ domain 22
Nucleotidylyl transferase tRNA-binding arm 22
NSFL1 (p97 ATPase) cofactor p47, SEP domain Ubiquitin-like 22
Second domain of FERM PH domain-like 21
Translation proteins SH3-like domain Translation proteins SH3-like domain 22
POZ domain Pentapeptide repeat-like 21
Concanavalin A-like lectins/glucanases PH domain-like 22
FGAM synthase PurL, linker domain PurM C-terminal domain-like 21
P-loop containing nucleoside triphosphate hydrolases CCCH zinc finger 21
Methylglyoxal synthase-like Cytidine deaminase-like 21
Protein kinase-like (PK-like) BEACH domain 22
N-terminal domain of adenylylcyclase associated protein, CAP C-terminal domain of adenylylcyclase associated protein 21
BRCT domain DNA polymerase beta, N-terminal domain-like 21
CCCH zinc finger ARM repeat 21
P-loop containing nucleoside triphosphate hydrolases D-aminoacid aminotransferase-like PLP-dependent enzymes 21
Chromo domain-like RNI-like 22
PreATP-grasp domain ClpP/crotonase 22
Purple acid phosphatase, N-terminal domain PLP-dependent transferases 21
Putative DNA-binding domain PheT/TilS domain 22
Translation proteins Translation proteins 22
vWA-like SPOC domain-like 22
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 22
Metalloproteases ("zincins"), catalytic domain ARM repeat 22
S15/NS1 RNA-binding domain Class II aaRS and biotin synthetases 21
Alpha subunit of glutamate synthase, C-terminal domain alpha-helical ferredoxin 22
HMA, heavy metal-associated domain Cu,Zn superoxide dismutase-like 21
PH domain-like (Phosphotyrosine protein) phosphatases II 22
Clathrin heavy-chain terminal domain ARM repeat 21
Outer arm dynein light chain 1 RNI-like 22
Amidase signature (AS) enzymes TPR-like 21
DNA polymerase beta, N-terminal domain-like Nucleotidyltransferase 21
Lysozyme-like Lysozyme-like 22
F-box domain HLH, helix-loop-helix DNA-binding domain 21
Probable bacterial effector-binding domain Probable bacterial effector-binding domain 22
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 22
RCC1/BLIP-II LuxS/MPP-like metallohydrolase 22
Tropomyosin Tropomyosin 22
WD40 repeat-like Tricorn protease domain 2 21
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 22
Carbamate kinase-like Acyl-CoA N-acyltransferases (Nat) 22
FAD/NAD(P)-binding domain S-adenosyl-L-methionine-dependent methyltransferases 21
Protein kinase-like (PK-like) DNA-glycosylase 21
PurS-like Class I glutamine amidotransferase-like 21
PurS-like FGAM synthase PurL, linker domain 21
4Fe-4S ferredoxins Ribonuclease H-like 21
Metallo-dependent phosphatases Ornithine decarboxylase C-terminal domain 21
Taf5 N-terminal domain-like WD40 repeat-like 21
Nucleoporin domain WD40 repeat-like 22
Clavaminate synthase-like Clavaminate synthase-like 11
N-terminal, heterodimerisation domain of RBP7 (RpoE) Concanavalin A-like lectins/glucanases 11
POZ domain DNase I-like 11
Thioredoxin-like VC0467-like 11
Cystatin/monellin Cystatin/monellin 11
TolB, C-terminal domain WD40 repeat-like 11
Acyl-CoA N-acyltransferases (Nat) Bromodomain 11
Galactose oxidase, central domain P-loop containing nucleoside triphosphate hydrolases 11
Concanavalin A-like lectins/glucanases P-loop containing nucleoside triphosphate hydrolases 11
Cyclophilin-like Retrovirus zinc finger-like domains 11
PDZ domain-like TPR-like 11
Terpenoid synthases DNA/RNA polymerases 11
Homeodomain-like Bromodomain 11
TPR-like ssDNA-binding transcriptional regulator domain 11
Sec1/munc18-like (SM) proteins Sec1/munc18-like (SM) proteins 11
Argininosuccinate synthetase, C-terminal domain Argininosuccinate synthetase, C-terminal domain 11
Hemopexin-like domain Hemopexin-like domain 11
BRCT domain P-loop containing nucleoside triphosphate hydrolases 11
Six-hairpin glycosidases AbfB domain 11
CBS-domain pair FAD-binding/transporter-associated domain-like 11
UBC-like UBA-like 11
Ubiquitin-like Cysteine proteinases 11
ARM repeat Nucleic acid-binding proteins 11
ARM repeat DNase I-like 11
Ribonuclease H-like Heme-dependent peroxidases 11
Adenine nucleotide alpha hydrolases-like DHS-like NAD/FAD-binding domain 11
Kelch motif DNase I-like 11
ARM repeat UBA-like 11
RNA-binding domain, RBD ENTH/VHS domain 11
Nucleotide-diphospho-sugar transferases Protein kinase-like (PK-like) 11
Cytochrome P450 Phosphoglycerate mutase-like 11
RuvA domain 2-like SH2 domain 11
Adenine nucleotide alpha hydrolases-like YjgF-like 11
DNA-binding pseudobarrel domain P-loop containing nucleoside triphosphate hydrolases 11
HAD-like NHL repeat 11
Concanavalin A-like lectins/glucanases Retrovirus zinc finger-like domains 11
ClpP/crotonase Protein kinase-like (PK-like) 11
EF-hand C2 domain (Calcium/lipid-binding domain, CaLB) 11
HD-domain/PDEase-like ACT-like 11
STI-like DNA/RNA polymerases 11
Glucocorticoid receptor-like (DNA-binding domain) Domain of poly(ADP-ribose) polymerase 11
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 11
HIT-like HIT-like 11
PIN domain-like Nucleic acid-binding proteins 11
Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
Ribonuclease H-like Nucleic acid-binding proteins 11
alpha/beta-Hydrolases P-loop containing nucleoside triphosphate hydrolases 11
RNI-like Arginase/deacetylase 11
DNA/RNA polymerases Galactose-binding domain-like 11
Putative DNA-binding domain Putative DNA-binding domain 11
Acid proteases RNI-like 11
ARM repeat Retrovirus zinc finger-like domains 11
P-loop containing nucleoside triphosphate hydrolases Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain 11
Hermes dimerisation domain DNA/RNA polymerases 11
vWA-like C-terminal domain of Ku80 11
beta-beta-alpha zinc fingers DNA/RNA polymerases 11
RNI-like DNase I-like 11
Aquaporin-like Retrovirus zinc finger-like domains 11
Heme-dependent peroxidases RNI-like 11
Chaperone J-domain HSC20 (HSCB), C-terminal oligomerisation domain 11
Ribonuclease H-like t-snare proteins 11
F-box domain TPR-like 11
Ribosome inactivating proteins (RIP) Cysteine proteinases 11
SAP domain WGR domain-like 11
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 11
Thioredoxin-like YWTD domain 11
Acyl-CoA N-acyltransferases (Nat) BRCT domain 11
Tryptophan synthase beta subunit-like PLP-dependent enzymes ACT-like 11
Protein prenylyltransferase L domain-like 11
Kelch motif RING/U-box 11
Crambin-like Crambin-like 11
PAZ domain Retrovirus zinc finger-like domains 11
P-loop containing nucleoside triphosphate hydrolases HIT-like 11
Formin homology 2 domain (FH2 domain) EF-hand 11
F-box domain Arabinanase/levansucrase/invertase 11
L domain-like Thioredoxin-like 11
beta-Galactosidase/glucuronidase domain Galactose mutarotase-like 11
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 11
FAD/NAD(P)-binding domain Thioredoxin-like 11
Glycerol-3-phosphate (1)-acyltransferase Ribonuclease H-like 11
Cna protein B-type domain Cna protein B-type domain 11
F-box domain Calcium-dependent phosphotriesterase 11
BRCT domain post-AAA+ oligomerization domain-like 11
"Winged helix" DNA-binding domain HRDC-like 11
PUA domain-like eIF1-like 11
RNA-binding domain, RBD S-adenosyl-L-methionine-dependent methyltransferases 11
L-aspartase-like Class II aaRS ABD-related 11
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 11
Chaperone J-domain RNA-binding domain, RBD 11
C2 domain (Calcium/lipid-binding domain, CaLB) (Trans)glycosidases 11
Metallo-hydrolase/oxidoreductase Protein kinase-like (PK-like) 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
TGS-like Class II aaRS ABD-related 11
Ribonuclease H-like FAD-binding/transporter-associated domain-like 11
Cna protein B-type domain Starch-binding domain-like 11
Urease, gamma-subunit Composite domain of metallo-dependent hydrolases 11
Tricorn protease N-terminal domain DPP6 N-terminal domain-like 11
WW domain FF domain 11
RNA polymerase subunits RING/U-box 11
C2 domain (Calcium/lipid-binding domain, CaLB) Formin homology 2 domain (FH2 domain) 11
alpha/beta-Hydrolases alpha/beta-Hydrolases 11
Putative isomerase YbhE RING/U-box 11
CCCH zinc finger S-adenosyl-L-methionine-dependent methyltransferases 11
Acid proteases Cysteine proteinases 11
DNA/RNA polymerases Nucleic acid-binding proteins 11
F-box domain 3-carboxy-cis,cis-mucoante lactonizing enzyme 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
Ankyrin repeat RCC1/BLIP-II 11
2Fe-2S ferredoxin-like Glucocorticoid receptor-like (DNA-binding domain) 11
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 11
Tropomyosin Smc hinge domain 11
BAR/IMD domain-like EreA/ChaN-like 11
Tudor/PWWP/MBT DNA repair protein MutS, domain III 11
Plus3-like CCCH zinc finger 11
Nucleic acid-binding proteins BRCA2 tower domain 11
Nucleic acid-binding proteins Concanavalin A-like lectins/glucanases 11
DNA/RNA polymerases Acetyl-CoA synthetase-like 11
POZ domain Tricorn protease domain 2 11
Osmotin, thaumatin-like protein Protein kinase-like (PK-like) 11
BSD domain-like BSD domain-like 11
RING/U-box DNA/RNA polymerases 11
Tubulin nucleotide-binding domain-like Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 11
Tropomyosin Myosin rod fragments 11
Acetyl-CoA synthetase-like Trimeric LpxA-like enzymes 11
Calponin-homology domain, CH-domain ARM repeat 11
Tex N-terminal region-like RuvA domain 2-like 11
beta-sandwich domain of Sec23/24 Ribonuclease H-like 11
Tricorn protease N-terminal domain alpha/beta-Hydrolases 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
FYVE/PHD zinc finger CCCH zinc finger 11
Glucocorticoid receptor-like (DNA-binding domain) BRCT domain 11
6-phosphogluconate dehydrogenase C-terminal domain-like YgbK-like 11
Nucleic acid-binding proteins TPR-like 11
DNA primase core P-loop containing nucleoside triphosphate hydrolases 11
UBA-like NSFL1 (p97 ATPase) cofactor p47, SEP domain 11
Glucocorticoid receptor-like (DNA-binding domain) ADP-ribosylation 11
HLH, helix-loop-helix DNA-binding domain Formin homology 2 domain (FH2 domain) 11
Ribonuclease H-like Galactose-binding domain-like 11
DNA/RNA polymerases Starch-binding domain-like 11
Growth factor receptor domain Retrovirus zinc finger-like domains 11
DNA/RNA polymerases Thioesterase/thiol ester dehydrase-isomerase 11
Ribonuclease H-like Acetyl-CoA synthetase-like 11
Leukotriene A4 hydrolase N-terminal domain Leukotriene A4 hydrolase N-terminal domain 11
2Fe-2S ferredoxin-like 4Fe-4S ferredoxins 11
HesB-like domain Ribonuclease H-like 11
CRAL/TRIO domain FKBP-like 11
Thioredoxin-like Ribonuclease H-like 11
Ubiquitin-like Acid proteases 11
Ribonuclease H-like SH2 domain 11
PUA domain-like Formin homology 2 domain (FH2 domain) 11
beta-sandwich domain of Sec23/24 Cysteine proteinases 11
UBA-like Hect, E3 ligase catalytic domain 11
Voltage-gated potassium channels TrkA C-terminal domain-like 11
Tudor/PWWP/MBT DNA repair protein MutS, domain II 11
NAD(P)-binding Rossmann-fold domains YgbK-like 11
MFS general substrate transporter Ribonuclease H-like 11
Endosomal sorting complex assembly domain VPS28 C-terminal domain-like 11
F-box domain NHL repeat 11
Cysteine proteinases Cupredoxins 11
RuBisCO, large subunit, small (N-terminal) domain S15/NS1 RNA-binding domain 11
Dcp2 domain-like Nudix 11
Starch-binding domain-like Glutathione synthetase ATP-binding domain-like 11
WD40 repeat-like Calcium-dependent phosphotriesterase 11
DNA-glycosylase Retrovirus zinc finger-like domains 11
Ribonuclease H-like Ribosome inactivating proteins (RIP) 11
Leucine zipper domain Concanavalin A-like lectins/glucanases 11
Ankyrin repeat Ribonuclease H-like 11
Aldolase Aldolase 11
Tricorn protease domain 2 alpha/beta-Hydrolases 11
Retrovirus zinc finger-like domains FAD-binding/transporter-associated domain-like 11
L domain-like Chromo domain-like 11
P-loop containing nucleoside triphosphate hydrolases Tropomyosin 11
PRP4-like WD40 repeat-like 11
FYVE/PHD zinc finger TPR-like 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleic acid-binding proteins 11
TGS-like ThrRS/AlaRS common domain 11
Ribonuclease H-like Thioesterase/thiol ester dehydrase-isomerase 11
WD40 repeat-like Bromodomain 11
alpha/beta-Hydrolases NAD(P)-binding Rossmann-fold domains 11
SRF-like Cysteine proteinases 11
GAT-like domain Aconitase iron-sulfur domain 11
Acetyl-CoA synthetase-like RING/U-box 11
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 11
Retrovirus zinc finger-like domains RNI-like 11
NAD(P)-binding Rossmann-fold domains Citrate synthase 11
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 11
DNA/RNA polymerases t-snare proteins 11
Acid proteases UBA-like 11
Cyclin-like Cysteine proteinases 11
GST C-terminal domain-like Nucleic acid-binding proteins 11
6-phosphogluconate dehydrogenase C-terminal domain-like Aldolase 11
DNA/RNA polymerases FAD-binding/transporter-associated domain-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) N-terminal nucleophile aminohydrolases (Ntn hydrolases) 11
Metallo-hydrolase/oxidoreductase Nucleic acid-binding proteins 11
SWIB/MDM2 domain eIF1-like 11
Ricin B-like lectins Glycosyl hydrolase domain 11
Protein kinase-like (PK-like) RNA-binding domain, RBD 11
DNA/RNA polymerases DNA-binding pseudobarrel domain 11
Sigma2 domain of RNA polymerase sigma factors Sigma2 domain of RNA polymerase sigma factors 11
Ubiquitin-like Bromodomain 11
TGS-like Class II aaRS and biotin synthetases 11
Ribonuclease H-like Starch-binding domain-like 11
R3H domain Ankyrin repeat 11
Glucocorticoid receptor-like (DNA-binding domain) HAD-like 11
PUA domain-like alpha/beta knot 11
ARM repeat F-box domain 11
DNA-glycosylase DNA/RNA polymerases 11
Macro domain-like Macro domain-like 11
Concanavalin A-like lectins/glucanases WD40 repeat-like 11
RNA-binding domain, RBD PWI domain 11
L domain-like ARM repeat 11
GYF domain CCCH zinc finger 11
Ankyrin repeat S-adenosyl-L-methionine-dependent methyltransferases 11
PreATP-grasp domain Methylglyoxal synthase-like 11
Elongation factor Ts (EF-Ts), dimerisation domain Elongation factor Ts (EF-Ts), dimerisation domain 11
TRAF domain-like DNA/RNA polymerases 11
Concanavalin A-like lectins/glucanases SH2 domain 11
EGF/Laminin EGF/Laminin 11
Lipocalins Lipocalins 11
SWIB/MDM2 domain CCCH zinc finger 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
Tricorn protease domain 2 ARM repeat 11
Terpenoid synthases Terpenoid synthases 11
PUA domain-like SWIB/MDM2 domain 11
Thioredoxin-like DNA/RNA polymerases 11
Acyl-CoA binding protein Galactose oxidase, central domain 11
F-box domain Arginase/deacetylase 11
L domain-like RING/U-box 11
NAD(P)-binding Rossmann-fold domains Homeodomain-like 11
SET domain HIT/MYND zinc finger-like 11
L domain-like (Trans)glycosidases 11
Nucleotidyltransferase TGS-like 11
Cysteine proteinases Metallo-dependent phosphatases 11
GroEL equatorial domain-like GroEL equatorial domain-like 11
DNA-binding pseudobarrel domain L domain-like 11
PapD-like Ubiquitin-like 11
Protein kinase-like (PK-like) PH domain-like 11
DEK C-terminal domain ssDNA-binding transcriptional regulator domain 11
RPB6/omega subunit-like RPB6/omega subunit-like 11
DNA/RNA polymerases GST C-terminal domain-like 11
Nucleic acid-binding proteins Cysteine proteinases 11
Ribonuclease H-like SNARE-like 11
Carbohydrate phosphatase Carbohydrate phosphatase 11
SH2 domain SH2 domain 11
ARM repeat alpha/beta-Hydrolases 11
Pseudo ankyrin repeat-like Ankyrin repeat 11
FYVE/PHD zinc finger Transducin (alpha subunit), insertion domain 11
Cap-Gly domain L domain-like 11
"Winged helix" DNA-binding domain Zinc beta-ribbon 11
RCC1/BLIP-II Acid proteases 11
PHL pollen allergen Histone-fold 11
RNA-binding domain, RBD Surp module (SWAP domain) 11
Nucleic acid-binding proteins UBA-like 11
beta-beta-alpha zinc fingers CCCH zinc finger 11
Actin-crosslinking proteins Actin-crosslinking proteins 11
Pre-PUA domain PUA domain-like 11
Nucleic acid-binding proteins Elongation factor Ts (EF-Ts), dimerisation domain 11
N-terminal, heterodimerisation domain of RBP7 (RpoE) Protein kinase-like (PK-like) 11
UBC-like Protein kinase-like (PK-like) 11
Homeodomain-like Formin homology 2 domain (FH2 domain) 11
FAD/NAD(P)-binding domain Heme-dependent catalase-like 11
DNA/RNA polymerases beta-carbonic anhydrase, cab 11
DNA/RNA polymerases Ribosome inactivating proteins (RIP) 11
Folate-binding domain Aminomethyltransferase beta-barrel domain 11
cAMP-binding domain-like Thioesterase/thiol ester dehydrase-isomerase 11
Acetyl-CoA synthetase-like Heme-dependent catalase-like 11
PRC-barrel domain PRC-barrel domain 11
Tex N-terminal region-like Nucleic acid-binding proteins 11
Class I glutamine amidotransferase-like ADC synthase 11
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 11
RING/U-box Acid proteases 11
Ribonuclease H-like beta-carbonic anhydrase, cab 11
WD40 repeat-like TPR-like 11
vWA-like Cysteine-rich domain 11
C2 domain (Calcium/lipid-binding domain, CaLB) alpha/beta-Hydrolases 11
SAP domain ADP-ribosylation 11
L-aspartase-like L-aspartase-like 11
Glycerol-3-phosphate (1)-acyltransferase DNA/RNA polymerases 11
TolB, C-terminal domain SNARE fusion complex 11
DEK C-terminal domain SWIB/MDM2 domain 11
Cysteine proteinases Cysteine proteinases 11
RmlC-like cupins RmlC-like cupins 11
HD-domain/PDEase-like TGS-like 11
PR-1-like Protein kinase-like (PK-like) 11
PLP-dependent transferases PK beta-barrel domain-like 11
TRAF domain-like Ribonuclease H-like 11
WW domain S-adenosyl-L-methionine-dependent methyltransferases 11
PAZ domain DNA/RNA polymerases 11
"Winged helix" DNA-binding domain Retrovirus zinc finger-like domains 11
UBA-like DNase I-like 11
Acyl-CoA N-acyltransferases (Nat) Acyl-CoA N-acyltransferases (Nat) 11
YjgF-like YjgF-like 11
PX domain EreA/ChaN-like 11
Plant lectins/antimicrobial peptides Plant lectins/antimicrobial peptides 11
Growth factor receptor domain Ribonuclease H-like 11
Tudor/PWWP/MBT Tudor/PWWP/MBT 11
Concanavalin A-like lectins/glucanases EGF/Laminin 11
F-box domain Actin-like ATPase domain 11
Lipocalins WRKY DNA-binding domain 11
Acyl-CoA binding protein Ankyrin repeat 11
Nucleotide-binding domain Nucleotide-binding domain 11
SPOC domain-like SAP domain 11
TAF(II)230 TBP-binding fragment Bromodomain 11
PGBD-like DnaJ/Hsp40 cysteine-rich domain 11
Chromo domain-like Homeodomain-like 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
Rhodanese/Cell cycle control phosphatase alpha/beta-Hydrolases 11
YjeF N-terminal domain-like FMN-binding split barrel 11
Chaperone J-domain beta-beta-alpha zinc fingers 11
P-loop containing nucleoside triphosphate hydrolases PLP-dependent transferases 11
SufE/NifU NadA-like 11
TPR-like DNase I-like 11
DNA repair protein MutS, domain I GIY-YIG endonuclease 11
UBA-like S-adenosyl-L-methionine-dependent methyltransferases 11
Translational machinery components C-terminal domain of RNA polymerase alpha subunit 11
Cysteine proteinases UBA-like 11
WD40 repeat-like SNARE fusion complex 11
Thioredoxin-like DNase I-like 11
RNA-binding domain, RBD DPP6 N-terminal domain-like 11
P-loop containing nucleoside triphosphate hydrolases Thioredoxin-like 11
Ypt/Rab-GAP domain of gyp1p Formin homology 2 domain (FH2 domain) 11
NAC domain NAC domain 11
TRAF domain-like Retrovirus zinc finger-like domains 11
Class I glutamine amidotransferase-like Ribulose-phoshate binding barrel 11
HMG-box HMG-box 11
Kelch motif S-adenosyl-L-methionine-dependent methyltransferases 11
HAD-like YWTD domain 11
DNA repair protein MutS, domain III SMR domain-like 11
HCP-like Homing endonucleases 11
Urease, beta-subunit Metallo-dependent hydrolases 11
Macro domain-like HIT-like 11
P-loop containing nucleoside triphosphate hydrolases Eukaryotic type KH-domain (KH-domain type I) 11
Trimeric LpxA-like enzymes ARM repeat 11
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 11
S-adenosyl-L-methionine-dependent methyltransferases Retrovirus zinc finger-like domains 11
ITPase-like ITPase-like 11
Nucleic acid-binding proteins Protein kinase-like (PK-like) 11
Urease, gamma-subunit Metallo-dependent hydrolases 11
Cna protein B-type domain Carboxypeptidase regulatory domain-like 11
Acid proteases t-snare proteins 11
RNA-binding domain, RBD Ubiquitin-like 11
USP8 N-terminal domain-like JAB1/MPN domain 11
beta-beta-alpha zinc fingers EF-hand 11
Tudor/PWWP/MBT DNA repair protein MutS, domain I 11
ClpP/crotonase Cysteine proteinases 11
Macro domain-like CRAL/TRIO domain 11
P-loop containing nucleoside triphosphate hydrolases GIY-YIG endonuclease 11
Glutamyl tRNA-reductase catalytic, N-terminal domain Glutamyl tRNA-reductase dimerization domain 11
beta-sandwich domain of Sec23/24 Retrovirus zinc finger-like domains 11
FMN-dependent nitroreductase-like FMN-dependent nitroreductase-like 11
Ribonuclease H-like Outer arm dynein light chain 1 11
lambda repressor-like DNA-binding domains Cyanase C-terminal domain 11
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 11
P-loop containing nucleoside triphosphate hydrolases vWA-like 11
DNase I-like L domain-like 11
dsRNA-binding domain-like S-adenosyl-L-methionine-dependent methyltransferases 11
Urease, beta-subunit Composite domain of metallo-dependent hydrolases 11
S-adenosyl-L-methionine-dependent methyltransferases P-loop containing nucleoside triphosphate hydrolases 11
Nucleotidyltransferase ACT-like 11
Metallo-hydrolase/oxidoreductase Metallo-hydrolase/oxidoreductase 11
Glycerol-3-phosphate (1)-acyltransferase EF-hand 11
Concanavalin A-like lectins/glucanases (Trans)glycosidases 11
WD40 repeat-like HAD-like 11
Ribulose-phoshate binding barrel Rnp2-like 11
Metallo-hydrolase/oxidoreductase ATP-dependent DNA ligase DNA-binding domain 11
Tropomyosin RING/U-box 11
EF-hand TPR-like 11
FKBP-like Triger factor/SurA peptide-binding domain-like 11
TRAF domain-like Formin homology 2 domain (FH2 domain) 11
ACP-like Trimeric LpxA-like enzymes 11
4Fe-4S ferredoxins Metallo-hydrolase/oxidoreductase 11
L-aspartase-like Class II aaRS and biotin synthetases 11
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
NAD(P)-binding Rossmann-fold domains Ribonuclease H-like 11
FAD/NAD(P)-binding domain SMAD/FHA domain 11
F-box domain Tricorn protease N-terminal domain 11
RCC1/BLIP-II Galactose oxidase, central domain 11
NAD(P)-binding Rossmann-fold domains Retrovirus zinc finger-like domains 11
L domain-like FabD/lysophospholipase-like 11
Ribose/Galactose isomerase RpiB/AlsB RmlC-like cupins 11
Chromo domain-like beta-carbonic anhydrase, cab 11
Glutamyl tRNA-reductase catalytic, N-terminal domain NAD(P)-binding Rossmann-fold domains 11
Obg GTP-binding protein N-terminal domain Obg GTP-binding protein C-terminal domain 11
PDZ domain-like Rubredoxin-like 11
(Phosphotyrosine protein) phosphatases II Formin homology 2 domain (FH2 domain) 11
Bromodomain FYVE/PHD zinc finger 11
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 11
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 11
Fe-S cluster assembly (FSCA) domain-like P-loop containing nucleoside triphosphate hydrolases 11
Tudor/PWWP/MBT P-loop containing nucleoside triphosphate hydrolases 11
F-box domain Putative isomerase YbhE 11
BRCA2 helical domain Nucleic acid-binding proteins 11
Acid proteases DNase I-like 11
DNA-binding pseudobarrel domain RNI-like 11
SPOC domain-like C-terminal domain of Ku80 11
DPP6 N-terminal domain-like Calcium-dependent phosphotriesterase 11
F-box domain LysM domain 11
Rhomboid-like Ran binding protein zinc finger-like 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
Periplasmic binding protein-like I Voltage-gated potassium channels 11
Protein kinase-like (PK-like) PRP4-like 11
YgbK-like Aldolase 11
Urease, gamma-subunit Urease, beta-subunit 11
SMAD/FHA domain P-loop containing nucleoside triphosphate hydrolases 11
DNA/RNA polymerases Heme-dependent peroxidases 11
SufE/NifU BolA-like 11
RNA-binding domain, RBD Formin homology 2 domain (FH2 domain) 11
Class II aaRS and biotin synthetases GAD domain-like 11
PAZ domain Ubiquitin-like 11
Starch-binding domain-like (Trans)glycosidases 11
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 11
4Fe-4S ferredoxins Formate dehydrogenase/DMSO reductase, domains 1-3 11
POZ domain Calcium-dependent phosphotriesterase 11
Cysteine proteinases Calpain large subunit, middle domain (domain III) 11
Ribonuclease H-like Ubiquitin-like 11
DNA clamp DNA clamp 11
Cysteine proteinases WRKY DNA-binding domain 11
Tryptophan synthase beta subunit-like PLP-dependent enzymes Tryptophan synthase beta subunit-like PLP-dependent enzymes 11
RNI-like RING/U-box 11
GYF domain SET domain 11
Nqo1 FMN-binding domain-like Nqo1C-terminal domain-like 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
S-adenosyl-L-methionine-dependent methyltransferases DNA/RNA polymerases 11
Ribonuclease H-like EF-hand 11
HMA, heavy metal-associated domain Metal cation-transporting ATPase, ATP-binding domain N 11
S-adenosyl-L-methionine-dependent methyltransferases Protein kinase-like (PK-like) 11
ARM repeat Concanavalin A-like lectins/glucanases 11
"Winged helix" DNA-binding domain Protein kinase-like (PK-like) 11
Chromo domain-like Acyl-CoA N-acyltransferases (Nat) 11
Cupredoxins Retrovirus zinc finger-like domains 11
Cytochrome P450 Ribonuclease H-like 11
RuBisCo, C-terminal domain S15/NS1 RNA-binding domain 11
Nucleotide-diphospho-sugar transferases ARM repeat 11
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 11
Ankyrin repeat DNA/RNA polymerases 11
POZ domain Quinoprotein alcohol dehydrogenase-like 11
Hermes dimerisation domain Acid proteases 11
ARM repeat Chaperone J-domain 11
Cytochrome P450 Acid proteases 11
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 11
RuvA domain 2-like Nucleic acid-binding proteins 11
Chaperone J-domain Chaperone J-domain 11
Ribonuclease H-like Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor 11
FAD/NAD(P)-binding domain ACP-like 11
Quinoprotein alcohol dehydrogenase-like C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase 11
PLP-dependent transferases MOSC N-terminal domain-like 11
SAP domain Domain of poly(ADP-ribose) polymerase 11
Trigger factor ribosome-binding domain FKBP-like 11
Retrovirus zinc finger-like domains Starch-binding domain-like 11
ARM repeat FabD/lysophospholipase-like 11
beta-sandwich domain of Sec23/24 DNA/RNA polymerases 11
MFS general substrate transporter TPR-like 11
Voltage-gated potassium channels alpha/beta-Hydrolases 11
FAD-linked reductases, C-terminal domain 4Fe-4S ferredoxins 11
R3H domain P-loop containing nucleoside triphosphate hydrolases 11
Tex N-terminal region-like Ribonuclease H-like 11
Carbamate kinase-like LysM domain 11
Nucleic acid-binding proteins SH2 domain 11
Protein kinase-like (PK-like) Acyl-CoA dehydrogenase C-terminal domain-like 11
ARM repeat RNI-like 11
Ribonuclease H-like PLP-dependent transferases 11
Surp module (SWAP domain) ENTH/VHS domain 11
Ran binding protein zinc finger-like DNase I-like 11
F-box domain Cysteine proteinases 11
Formin homology 2 domain (FH2 domain) SET domain 11
PP2C-like Cyclin-like 11
Metallo-hydrolase/oxidoreductase DNA ligase/mRNA capping enzyme, catalytic domain 11
Putative isomerase YbhE ARM repeat 11
Cysteine proteinases DNA-binding domain 11
NAD(P)-binding Rossmann-fold domains DNA/RNA polymerases 11
FAD/NAD(P)-binding domain 4Fe-4S ferredoxins 11
Putative isomerase YbhE DNase I-like 11
Nucleotidylyl transferase Nucleic acid-binding proteins 11
Ubiquitin-like Hect, E3 ligase catalytic domain 11
Metallo-hydrolase/oxidoreductase EGF/Laminin 11
Translational machinery components RBP11-like subunits of RNA polymerase 11
Cysteine proteinases DNA topoisomerase IV, alpha subunit 11
Six-hairpin glycosidases Acid proteases 11
Chromo domain-like Ankyrin repeat 11
Glucocorticoid receptor-like (DNA-binding domain) WGR domain-like 11
BRCA2 helical domain BRCA2 tower domain 11
Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment DNA breaking-rejoining enzymes 11
DNA-glycosylase Ribonuclease H-like 11
Gamma-glutamyl cyclotransferase-like Mitochondrial glycoprotein MAM33-like 11
beta and beta-prime subunits of DNA dependent RNA-polymerase beta and beta-prime subunits of DNA dependent RNA-polymerase 11
F-box domain NTF2-like 11
Heme oxygenase-like HAD-like 11
TGS-like ACT-like 11
SSo0622-like Kelch motif 11
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
S-adenosyl-L-methionine-dependent methyltransferases Ribonuclease H-like 11
Trimeric LpxA-like enzymes Heme-dependent catalase-like 11
Ubiquitin-like F-box domain 11
Cullin repeat-like DNA/RNA polymerases 11
Transmembrane di-heme cytochromes a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 11
NAD(P)-binding Rossmann-fold domains L domain-like 11
Plant invertase/pectin methylesterase inhibitor DNA/RNA polymerases 11
RNA-binding domain, RBD Clavaminate synthase-like 11
Cyclin-like NAD(P)-binding Rossmann-fold domains 11
Ribosomal protein S6 Ribosomal protein S6 11
HisI-like all-alpha NTP pyrophosphatases 11
E set domains E set domains 11
F-box domain DNase I-like 11
F-box domain Protein kinase-like (PK-like) 11
DNA/RNA polymerases RuvA domain 2-like 11
Tex N-terminal region-like SH2 domain 11
Radical SAM enzymes Acyl-CoA N-acyltransferases (Nat) 11
ACP-like Heme-dependent catalase-like 11
TPR-like Metallo-dependent hydrolases 11
Thioredoxin-like NHL repeat 11
AF0104/ALDC/Ptd012-like L domain-like 11
UBC-like Endosomal sorting complex assembly domain 11
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 11
Retrovirus zinc finger-like domains Galactose-binding domain-like 11
Sec63 N-terminal domain-like DNA/RNA polymerases 11
ARM repeat SH3-domain 11
Retrovirus zinc finger-like domains Acetyl-CoA synthetase-like 11
DNA/RNA polymerases Clavaminate synthase-like 11
Pre-protein crosslinking domain of SecA Pre-protein crosslinking domain of SecA 11
FAD/NAD(P)-binding domain Trimeric LpxA-like enzymes 11
RNA polymerase subunit RPB10 RNA polymerase subunit RPB10 11
Skp1 dimerisation domain-like DNase I-like 11
Starch-binding domain-like Carboxypeptidase regulatory domain-like 11
AraD/HMP-PK domain-like HAD-like 11
beta-beta-alpha zinc fingers S-adenosyl-L-methionine-dependent methyltransferases 11
(Phosphotyrosine protein) phosphatases II NAD kinase/diacylglycerol kinase-like 11
Concanavalin A-like lectins/glucanases Calpain large subunit, middle domain (domain III) 11
Class II aaRS and biotin synthetases HD-domain/PDEase-like 11
alpha/beta-Hydrolases NAC domain 11
2Fe-2S ferredoxin-like Formate dehydrogenase/DMSO reductase, domains 1-3 11
RING/U-box Myosin rod fragments 11
Nqo1 FMN-binding domain-like Nqo1 middle domain-like 11
Hypothetical protein SAV1430 Fe-S cluster assembly (FSCA) domain-like 11
ACP-like ACP-like 11
Ribonuclease H-like RuvA domain 2-like 11
TPR-like PH domain-like 11
Pectin lyase-like DNA/RNA polymerases 11
Phosphoglycerate kinase S-adenosyl-L-methionine-dependent methyltransferases 11
Cytochrome P450 Sm-like ribonucleoproteins 11
PYP-like sensor domain (PAS domain) CheY-like 11
LuxS/MPP-like metallohydrolase Acid proteases 11
L9 N-domain-like Ribonuclease H-like 11
alpha-helical ferredoxin Glucocorticoid receptor-like (DNA-binding domain) 11
Acid proteases beta-carbonic anhydrase, cab 11
AF0104/ALDC/Ptd012-like P-loop containing nucleoside triphosphate hydrolases 11
DNA/RNA polymerases EGF/Laminin 11
P-loop containing nucleoside triphosphate hydrolases SMR domain-like 11
(Phosphotyrosine protein) phosphatases II (Phosphotyrosine protein) phosphatases II 11
Histone-fold ARM repeat 11
Nqo1 middle domain-like Nqo1C-terminal domain-like 11
Starch-binding domain-like Starch-binding domain-like 11
Protease propeptides/inhibitors PA domain 11
Concanavalin A-like lectins/glucanases Cysteine proteinases 11
PR-1-like PR-1-like 11
SAM/Pointed domain Metallo-hydrolase/oxidoreductase 11
Clavaminate synthase-like Protein kinase-like (PK-like) 11
vWA-like SAP domain 11
beta-sandwich domain of Sec23/24 Subtilisin-like 11
TPR-like NAD kinase/diacylglycerol kinase-like 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
FAD/NAD(P)-binding domain Acetyl-CoA synthetase-like 11
Formyltransferase FMT C-terminal domain-like 11
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
SSo0622-like S-adenosyl-L-methionine-dependent methyltransferases 11
F-box domain P-loop containing nucleoside triphosphate hydrolases 11
Flavoproteins Radical SAM enzymes 11
Concanavalin A-like lectins/glucanases Chromo domain-like 11
F-box domain Pectin lyase-like 11
NAD(P)-binding Rossmann-fold domains Glutamyl tRNA-reductase dimerization domain 11
Periplasmic binding protein-like II GlnB-like 11
SAP domain DNase I-like 11
TAF(II)230 TBP-binding fragment Ubiquitin-like 11
Ankyrin repeat HCP-like 11
Phosphoglycerate mutase-like Phosphoglycerate mutase-like 11
PAZ domain PAZ domain 11
Heme-dependent peroxidases Heme-dependent peroxidases 11
Calcyclin-binding protein-like HSP20-like chaperones 11
Cysteine proteinases ARM repeat 11
Voltage-gated potassium channels Formin homology 2 domain (FH2 domain) 11
P-loop containing nucleoside triphosphate hydrolases Obg GTP-binding protein C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases TPR-like 11
RuvA domain 2-like RuvA domain 2-like 11
Nucleic acid-binding proteins DNase I-like 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Nucleic acid-binding proteins 11
Nucleic acid-binding proteins Homeodomain-like 11
DNA-binding domain P-loop containing nucleoside triphosphate hydrolases 11
Retrovirus zinc finger-like domains Phosphoglycerate mutase-like 11
TPR-like HSP20-like chaperones 11
Protein kinase-like (PK-like) DNase I-like 11

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