SUPERFAMILY 1.75 HMM library and genome assignments server

Domain combination pairs in Cellvibrio japonicus Ueda107

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

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Adjacent domain pairs graph

Graph of adjacent domain pairs.


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Domain combination pairs

877 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 3118
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 2511
Nucleotide cyclase EAL domain-like 2116
(Trans)glycosidases Glycosyl hydrolase domain 1812
PYP-like sensor domain (PAS domain) Nucleotide cyclase 1613
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 162
"Winged helix" DNA-binding domain Periplasmic binding protein-like II 161
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 1411
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheY-like 1412
PYP-like sensor domain (PAS domain) EAL domain-like 1310
Actin-like ATPase domain Actin-like ATPase domain 136
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 1310
PYP-like sensor domain (PAS domain) PYP-like sensor domain (PAS domain) 1212
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 124
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 124
Homodimeric domain of signal transducing histidine kinase CheY-like 1210
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 114
CheY-like C-terminal effector domain of the bipartite response regulators 112
CheY-like EAL domain-like 109
Galactose-binding domain-like (Trans)glycosidases 1010
CheY-like PYP-like sensor domain (PAS domain) 1010
CheY-like Nucleotide cyclase 109
CheY-like CheY-like 108
Carbohydrate-binding domain Type X cellulose binding domain, CBDX 97
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 95
Galactose-binding domain-like Galactose-binding domain-like 99
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 83
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 83
Type X cellulose binding domain, CBDX (Trans)glycosidases 86
Carbohydrate-binding domain (Trans)glycosidases 86
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 83
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB transmembrane domain 83
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB transmembrane domain 83
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 83
P-loop containing nucleoside triphosphate hydrolases Translation proteins 86
Thiolase-like Thiolase-like 73
Carbohydrate-binding domain Galactose-binding domain-like 76
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 73
Histidine-containing phosphotransfer domain, HPT domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 75
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 74
TPR-like TPR-like 75
Histidine-containing phosphotransfer domain, HPT domain CheY-like 76
lambda repressor-like DNA-binding domains Periplasmic binding protein-like I 71
Concanavalin A-like lectins/glucanases Galactose-binding domain-like 77
CheY-like Homeodomain-like 63
NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains 66
CheY-like P-loop containing nucleoside triphosphate hydrolases 63
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 64
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 65
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 66
Histidine-containing phosphotransfer domain, HPT domain Homodimeric domain of signal transducing histidine kinase 64
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 63
GAF domain-like PYP-like sensor domain (PAS domain) 66
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 54
Calcium ATPase, transduction domain A HAD-like 55
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 53
GAF domain-like Nucleotide cyclase 55
PreATP-grasp domain Rudiment single hybrid motif 52
Homeodomain-like Tetracyclin repressor-like, C-terminal domain 51
Arabinanase/levansucrase/invertase Concanavalin A-like lectins/glucanases 52
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein S5 domain 2-like 54
ACP-like ACP-like 55
Thiolase-like ACP-like 55
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 54
NAD(P)-binding Rossmann-fold domains ACP-like 55
EspE N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 53
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 52
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 52
Composite domain of metallo-dependent hydrolases Metallo-dependent hydrolases 52
E set domains (Trans)glycosidases 55
HAD-like Calcium ATPase, transmembrane domain M 55
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 55
Chemotaxis receptor methyltransferase CheR, N-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 41
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 42
PLP-binding barrel Alanine racemase C-terminal domain-like 43
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 42
Thiolase-like NAD(P)-binding Rossmann-fold domains 44
gamma-Crystallin-like Galactose-binding domain-like 44
Alpha-L RNA-binding motif Pseudouridine synthase 41
CoA-dependent acyltransferases ACP-like 44
GAF domain-like EAL domain-like 44
Translation proteins EF-G C-terminal domain-like 43
Acetyl-CoA synthetase-like ACP-like 44
ACT-like ACT-like 43
(Trans)glycosidases Beta-D-glucan exohydrolase, C-terminal domain 42
HAMP domain-like Homodimeric domain of signal transducing histidine kinase 42
"Winged helix" DNA-binding domain GntR ligand-binding domain-like 41
CoA-dependent acyltransferases CoA-dependent acyltransferases 44
Carbohydrate binding domain (Trans)glycosidases 44
EF-G C-terminal domain-like EF-G C-terminal domain-like 43
HAMP domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 42
Nucleic acid-binding proteins Nucleic acid-binding proteins 44
GroES-like NAD(P)-binding Rossmann-fold domains 44
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 43
Triger factor/SurA peptide-binding domain-like FKBP-like 44
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 44
GAF domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 33
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 33
Flavoproteins Riboflavin synthase domain-like 32
HD-domain/PDEase-like ACT-like 32
PDZ domain-like ClpP/crotonase 31
Flavoproteins Ferredoxin reductase-like, C-terminal NADP-linked domain 32
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 33
Galactose mutarotase-like Glycosyl hydrolase domain 32
Class II aaRS and biotin synthetases Class II aaRS ABD-related 33
Nucleotidyltransferase ACT-like 32
Periplasmic binding protein-like II Nucleotide cyclase 33
Lysozyme-like beta-lactamase/transpeptidase-like 33
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 33
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 32
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 33
E set domains Glycosyl hydrolase domain 33
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheW-like 32
CoA-dependent acyltransferases Acetyl-CoA synthetase-like 33
(Trans)glycosidases Chitinase insertion domain 33
RuvA domain 2-like Nucleic acid-binding proteins 33
Integrin alpha N-terminal domain Fibronectin type III 33
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 32
Histidine-containing phosphotransfer domain, HPT domain CheW-like 32
E set domains Six-hairpin glycosidases 32
E set domains E set domains 33
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 31
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 32
CBS-domain pair FAD-binding/transporter-associated domain-like 31
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 33
beta-N-acetylhexosaminidase-like domain (Trans)glycosidases 33
HMA, heavy metal-associated domain HAD-like 33
MurCD N-terminal domain MurD-like peptide ligases, catalytic domain 31
Fibronectin type III Galactose-binding domain-like 33
PurM N-terminal domain-like PurM C-terminal domain-like 32
NAD(P)-binding Rossmann-fold domains ACT-like 32
Arabinanase/levansucrase/invertase Ricin B-like lectins 32
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 32
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 32
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 33
Galactose mutarotase-like (Trans)glycosidases 32
beta-Galactosidase/glucuronidase domain (Trans)glycosidases 33
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 33
Rhodanese/Cell cycle control phosphatase Rhodanese/Cell cycle control phosphatase 32
Acetyl-CoA synthetase-like Acetyl-CoA synthetase-like 33
Integrin alpha N-terminal domain Integrin alpha N-terminal domain 33
MurCD N-terminal domain MurD-like peptide ligases, peptide-binding domain 31
Trypsin-like serine proteases PDZ domain-like 33
Cadherin-like Cadherin-like 33
PYP-like sensor domain (PAS domain) Methyl-accepting chemotaxis protein (MCP) signaling domain 33
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 33
Galactose-binding domain-like beta-Galactosidase/glucuronidase domain 33
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 32
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 31
HD-domain/PDEase-like Nucleotidyltransferase 32
L30e-like alpha/beta knot 31
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 31
cAMP-binding domain-like "Winged helix" DNA-binding domain 31
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
Lysozyme-like PGBD-like 22
HD-domain/PDEase-like TGS-like 21
Rudiment single hybrid motif Single hybrid motif 21
Carbohydrate-binding domain PKD domain 22
EF-G C-terminal domain-like Ribosomal protein S5 domain 2-like 21
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 21
Oligoxyloglucan reducing end-specific cellobiohydrolase Sialidases 22
Glutathione synthetase ATP-binding domain-like PH0987 N-terminal domain-like 21
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 22
Carbohydrate-binding domain YceI-like 22
(Trans)glycosidases CBD9-like 22
CheY-like Methylesterase CheB, C-terminal domain 21
Nucleotidyltransferase TGS-like 21
Galactose-binding domain-like Pectin lyase-like 22
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 21
Formate dehydrogenase/DMSO reductase, domains 1-3 ADC-like 22
Carboxypeptidase regulatory domain-like Porins 22
TSP type-3 repeat TSP type-3 repeat 22
cAMP-binding domain-like cAMP-binding domain-like 21
HAMP domain-like Histidine-containing phosphotransfer domain, HPT domain 21
EspE N-terminal domain-like Fibronectin type III 22
Galactose-binding domain-like alpha/beta-Hydrolases 21
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 22
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 22
PDZ domain-like PDZ domain-like 22
Soluble quinoprotein glucose dehydrogenase Cytochrome c 22
6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 21
P-loop containing nucleoside triphosphate hydrolases MOP-like 21
Folate-binding domain Aminomethyltransferase beta-barrel domain 21
"Winged helix" DNA-binding domain PLP-dependent transferases 21
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 21
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 21
Homodimeric domain of signal transducing histidine kinase CheW-like 21
alpha/beta-Hydrolases S-adenosyl-L-methionine-dependent methyltransferases 22
Carbohydrate binding domain Chitinase insertion domain 22
SMAD/FHA domain SMAD/FHA domain 21
Ribonuclease H-like DNA/RNA polymerases 22
Fibronectin type III Carbohydrate-binding domain 22
Thiolase-like GroES-like 22
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 21
tRNA-binding arm Class II aaRS and biotin synthetases 21
Single hybrid motif Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 22
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
PreATP-grasp domain PH0987 N-terminal domain-like 21
Glutathione synthetase ATP-binding domain-like Cyclophilin-like 21
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 21
CheW-like CheY-like 22
Cyclophilin-like PH0987 N-terminal domain-like 21
NAD(P)-binding Rossmann-fold domains S-adenosyl-L-methionine-dependent methyltransferases 22
Carbohydrate-binding domain alpha/beta-Hydrolases 21
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 21
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 22
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 22
Ricin B-like lectins Ricin B-like lectins 21
Single hybrid motif CoA-dependent acyltransferases 22
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 21
NAD(P)-binding Rossmann-fold domains UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 21
GroES-like ACP-like 22
Cupredoxins Cupredoxins 22
PreATP-grasp domain Single hybrid motif 21
Methylated DNA-protein cysteine methyltransferase domain Methylated DNA-protein cysteine methyltransferase, C-terminal domain 22
Phospholipase D/nuclease Phospholipase D/nuclease 22
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 22
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 22
TGS-like ACT-like 21
Glutathione synthetase ATP-binding domain-like Single hybrid motif 21
Starch-binding domain-like (Trans)glycosidases 22
Oligoxyloglucan reducing end-specific cellobiohydrolase Oligoxyloglucan reducing end-specific cellobiohydrolase 22
PKD domain PKD domain 22
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 22
Galactose-binding domain-like Integrin alpha N-terminal domain 22
DNA methylase specificity domain DNA methylase specificity domain 22
Nucleic acid-binding proteins Translation proteins SH3-like domain 22
Protein kinase-like (PK-like) TPR-like 22
Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase C-terminal domain-like 22
Rudiment single hybrid motif PH0987 N-terminal domain-like 21
OMPA-like OmpA-like 21
S-adenosyl-L-methionine-dependent methyltransferases ACP-like 22
Starch-binding domain-like Glycosyl hydrolase domain 22
Enolase N-terminal domain-like Enolase C-terminal domain-like 21
Thiolase-like S-adenosyl-L-methionine-dependent methyltransferases 22
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 22
MetI-like MetI-like 22
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 22
Cyclophilin-like Cyclophilin-like 21
Galactose-binding domain-like SGNH hydrolase 22
E set domains Type X cellulose binding domain, CBDX 22
ThrRS/AlaRS common domain Class II aaRS and biotin synthetases 22
Cyclophilin-like Single hybrid motif 21
HAMP domain-like CheY-like 21
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 22
Glycosyl hydrolase domain CBD9-like 22
(Trans)glycosidases Fibronectin type III 22
Galactose mutarotase-like Six-hairpin glycosidases 21
PP2C-like Protein kinase-like (PK-like) 21
Formate/glycerate dehydrogenase catalytic domain-like ACT-like 21
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 21
Thioredoxin-like Thioredoxin-like 22
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex CoA-dependent acyltransferases 22
"Winged helix" DNA-binding domain Dimeric alpha+beta barrel 21
ACP-like alpha/beta-Hydrolases 22
Cytochrome c Cytochrome c 22
Heme-dependent peroxidases Heme-dependent peroxidases 21
Penicillin binding protein dimerisation domain beta-lactamase/transpeptidase-like 22
GAF domain-like Homodimeric domain of signal transducing histidine kinase 22
Translation proteins Ribosomal protein S5 domain 2-like 21
Aldolase post-HMGL domain-like 22
Cadherin-like Fibronectin type III 22
Nucleotidyltransferase Nucleotidyltransferase substrate binding subunit/domain 22
Rudiment single hybrid motif Cyclophilin-like 21
Nucleotidyltransferase Poly A polymerase C-terminal region-like 21
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 22
PreATP-grasp domain Cyclophilin-like 21
NAD(P)-binding Rossmann-fold domains TrkA C-terminal domain-like 22
PYP-like sensor domain (PAS domain) Histidine-containing phosphotransfer domain, HPT domain 22
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 21
PH0987 N-terminal domain-like Single hybrid motif 21
cAMP-binding domain-like Rhodanese/Cell cycle control phosphatase 21
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 22
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
GreA transcript cleavage protein, N-terminal domain FKBP-like 21
E set domains Carbohydrate-binding domain 22
a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Cytochrome c 11
Hsp33 domain HSP33 redox switch-like 11
PIN domain-like DNA/RNA polymerases 11
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 11
MoeA N-terminal region -like Molybdenum cofactor biosynthesis proteins 11
Invasin/intimin cell-adhesion fragments Concanavalin A-like lectins/glucanases 11
SGNH hydrolase TPR-like 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
Class II aaRS and biotin synthetases Translation proteins 11
YVTN repeat-like/Quinoprotein amine dehydrogenase TSP type-3 repeat 11
Probable ACP-binding domain of malonyl-CoA ACP transacylase CoA-dependent acyltransferases 11
Glycerol-3-phosphate (1)-acyltransferase Acyl-CoA N-acyltransferases (Nat) 11
CO dehydrogenase molybdoprotein N-domain-like Molybdenum cofactor-binding domain 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
Cadherin-like Concanavalin A-like lectins/glucanases 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
PreATP-grasp domain PreATP-grasp domain 11
5' to 3' exonuclease, C-terminal subdomain DNA/RNA polymerases 11
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 11
Zinc beta-ribbon Prokaryotic SH3-related domain 11
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 11
Adenine nucleotide alpha hydrolases-like DHS-like NAD/FAD-binding domain 11
Type X cellulose binding domain, CBDX alpha/beta-Hydrolases 11
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 11
YWTD domain RCC1/BLIP-II 11
Nucleic acid-binding proteins PheT/TilS domain 11
Cadherin-like OMPA-like 11
FAD/NAD(P)-binding domain 4Fe-4S ferredoxins 11
Nucleic acid-binding proteins Anticodon-binding domain of PheRS 11
Carbamate kinase-like Acyl-CoA N-acyltransferases (Nat) 11
CBS-domain pair Nucleotide cyclase 11
all-alpha NTP pyrophosphatases all-alpha NTP pyrophosphatases 11
2Fe-2S ferredoxin-like CO dehydrogenase ISP C-domain like 11
2Fe-2S ferredoxin-like FAD-binding/transporter-associated domain-like 11
Thioredoxin-like Mss4-like 11
Transmembrane di-heme cytochromes a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 11
FAD/NAD(P)-binding domain alpha/beta-Hydrolases 11
Trigger factor ribosome-binding domain FKBP-like 11
Beta-D-glucan exohydrolase, C-terminal domain Galactose-binding domain-like 11
post-HMGL domain-like 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 11
FAD-linked oxidases, C-terminal domain alpha-helical ferredoxin 11
Fibronectin type III Fibronectin type III 11
Concanavalin A-like lectins/glucanases Concanavalin A-like lectins/glucanases 11
TGS-like ThrRS/AlaRS common domain 11
YajQ-like YajQ-like 11
Nucleotidyltransferase Nucleotidyltransferase 11
"Winged helix" DNA-binding domain LexA/Signal peptidase 11
YegP-like YegP-like 11
Ribosomal protein S5 domain 2-like HSP90 C-terminal domain 11
Cadherin-like Carboxypeptidase regulatory domain-like 11
Ferritin-like HAD-like 11
Histidine-containing phosphotransfer domain, HPT domain EAL domain-like 11
Tetrahydrobiopterin biosynthesis enzymes-like Tetrahydrobiopterin biosynthesis enzymes-like 11
PurM C-terminal domain-like Class I glutamine amidotransferase-like 11
GIY-YIG endonuclease C-terminal UvrC-binding domain of UvrB 11
Prokaryotic type KH domain (KH-domain type II) Prokaryotic type KH domain (KH-domain type II) 11
Methyl-accepting chemotaxis protein (MCP) signaling domain Sensory domain-like 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
Thermostable phytase (3-phytase) Thermostable phytase (3-phytase) 11
Nqo1 FMN-binding domain-like alpha-helical ferredoxin 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
Chaperone J-domain HSP40/DnaJ peptide-binding domain 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 11
gamma-Crystallin-like Concanavalin A-like lectins/glucanases 11
Thioredoxin-like FAD/NAD(P)-binding domain 11
WD40 repeat-like MetI-like 11
Zn-dependent exopeptidases LysM domain 11
"Winged helix" DNA-binding domain GAF domain-like 11
Phage tail proteins gp5 N-terminal domain-like 11
Fibronectin type III Cytochrome c 11
Glycosyl hydrolase domain Carbohydrate-binding domain 11
Multiheme cytochromes TPR-like 11
Chalcone isomerase TolA/TonB C-terminal domain 11
Glutathione synthetase ATP-binding domain-like Succinyl-CoA synthetase domains 11
lambda repressor-like DNA-binding domains RmlC-like cupins 11
Cupredoxins Cytochrome c 11
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 11
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 11
Periplasmic binding protein-like II PYP-like sensor domain (PAS domain) 11
Nitrite and sulphite reductase 4Fe-4S domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
Nitrite/Sulfite reductase N-terminal domain-like Nitrite/Sulfite reductase N-terminal domain-like 11
Probable ACP-binding domain of malonyl-CoA ACP transacylase GroES-like 11
Cytochrome c oxidase subunit II-like, transmembrane region Cupredoxins 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FMN-linked oxidoreductases 11
Six-hairpin glycosidases Type X cellulose binding domain, CBDX 11
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 11
P-loop containing nucleoside triphosphate hydrolases TGS-like 11
Nudix Thiamin phosphate synthase 11
PHP14-like Phospholipase D/nuclease 11
Nucleotidylyl transferase Riboflavin kinase-like 11
Formyltransferase FMT C-terminal domain-like 11
TGS-like Class II aaRS ABD-related 11
Single hybrid motif Single hybrid motif 11
Aldolase Single hybrid motif 11
YrdC/RibB RibA-like 11
GroES-like GroES-like 11
HRDC-like HRDC-like 11
FAD-linked reductases, C-terminal domain 4Fe-4S ferredoxins 11
GroEL-intermediate domain like GroEL apical domain-like 11
Putative DNA-binding domain P-loop containing nucleoside triphosphate hydrolases 11
FabD/lysophospholipase-like GroES-like 11
Transcription factor NusA, N-terminal domain Nucleic acid-binding proteins 11
FabD/lysophospholipase-like Inosine monophosphate dehydrogenase (IMPDH) 11
"Winged helix" DNA-binding domain NagB/RpiA/CoA transferase-like 11
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Nucleic acid-binding proteins 11
C-terminal UvrC-binding domain of UvrB RuvA domain 2-like 11
PUA domain-like Ribosomal protein S5 domain 2-like 11
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 11
Cadherin-like Integrin alpha N-terminal domain 11
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 11
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 11
Phage tail proteins Phage fibre proteins 11
Nucleotide cyclase SMAD/FHA domain 11
Dihydropteroate synthetase-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
WD40 repeat-like PKD domain 11
Nucleotidylyl transferase tRNA-binding arm 11
Acetyl-CoA synthetase-like NAD(P)-binding Rossmann-fold domains 11
Chorismate mutase II ACT-like 11
Galactose-binding domain-like Cytochrome c 11
Aconitase B, N-terminal domain Aconitase iron-sulfur domain 11
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 11
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
CheY-like HD-domain/PDEase-like 11
LysM domain LysM domain 11
RuvA domain 2-like DNA helicase RuvA subunit, C-terminal domain 11
Anthrax protective antigen Anthrax protective antigen 11
2Fe-2S ferredoxin-like Riboflavin synthase domain-like 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
YceI-like Fibronectin type III 11
beta-N-acetylhexosaminidase-like domain E set domains 11
HMA, heavy metal-associated domain HMA, heavy metal-associated domain 11
PLP-dependent transferases Ornithine decarboxylase C-terminal domain 11
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Carbon-nitrogen hydrolase Adenine nucleotide alpha hydrolases-like 11
Galactose-binding domain-like Family 10 polysaccharide lyase 11
Concanavalin A-like lectins/glucanases PKD domain 11
Eukaryotic type KH-domain (KH-domain type I) Nucleic acid-binding proteins 11
Carbohydrate binding domain Type X cellulose binding domain, CBDX 11
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) Homeodomain-like 11
WD40 repeat-like Quinoprotein alcohol dehydrogenase-like 11
Glucocorticoid receptor-like (DNA-binding domain) P-loop containing nucleoside triphosphate hydrolases 11
YVTN repeat-like/Quinoprotein amine dehydrogenase RCC1/BLIP-II 11
E set domains PKD domain 11
Soluble quinoprotein glucose dehydrogenase RCC1/BLIP-II 11
FabD/lysophospholipase-like NAD(P)-binding Rossmann-fold domains 11
Homocysteine S-methyltransferase Cobalamin (vitamin B12)-binding domain 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 11
Transmembrane di-heme cytochromes Cytochrome c 11
GAF domain-like Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 11
Cadherin-like Quinoprotein alcohol dehydrogenase-like 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain ACT-like 11
NTF2-like Sec-C motif 11
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 11
Peptide methionine sulfoxide reductase Thioredoxin-like 11
HlyD-like secretion proteins HlyD-like secretion proteins 11
Epsilon subunit of F1F0-ATP synthase N-terminal domain Epsilon subunit of F1F0-ATP synthase C-terminal domain 11
HD-domain/PDEase-like P-loop containing nucleoside triphosphate hydrolases 11
L9 N-domain-like Ribosomal protein L9 C-domain 11
PYP-like sensor domain (PAS domain) P-loop containing nucleoside triphosphate hydrolases 11
PPK N-terminal domain-like Phospholipase D/nuclease 11
GAF domain-like Phosphoenolpyruvate/pyruvate domain 11
Invasin/intimin cell-adhesion fragments Invasin/intimin cell-adhesion fragments 11
Nucleic acid-binding proteins Rad51 N-terminal domain-like 11
TrmE connector domain P-loop containing nucleoside triphosphate hydrolases 11
Nucleotidyltransferase substrate binding subunit/domain HD-domain/PDEase-like 11
Formate dehydrogenase/DMSO reductase, domains 1-3 Riboflavin synthase domain-like 11
Fibronectin type III Concanavalin A-like lectins/glucanases 11
Actin-like ATPase domain HD-domain/PDEase-like 11
TrkA C-terminal domain-like TrkA C-terminal domain-like 11
Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases 11
E set domains YVTN repeat-like/Quinoprotein amine dehydrogenase 11
PKD domain (Trans)glycosidases 11
"Winged helix" DNA-binding domain S-adenosyl-L-methionine-dependent methyltransferases 11
YhbC-like, N-terminal domain YhbC-like, C-terminal domain 11
Riboflavin synthase domain-like Riboflavin synthase domain-like 11
PurS-like PurM C-terminal domain-like 11
Sensory domain-like Homodimeric domain of signal transducing histidine kinase 11
Quinoprotein alcohol dehydrogenase-like RCC1/BLIP-II 11
Bacterial muramidases Lysozyme-like 11
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 11
Metalloproteases ("zincins"), catalytic domain gamma-Crystallin-like 11
DPP6 N-terminal domain-like alpha/beta-Hydrolases 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 11
PurM N-terminal domain-like Class I glutamine amidotransferase-like 11
YWTD domain YVTN repeat-like/Quinoprotein amine dehydrogenase 11
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 11
N-terminal domain of DnaB helicase P-loop containing nucleoside triphosphate hydrolases 11
YVTN repeat-like/Quinoprotein amine dehydrogenase YVTN repeat-like/Quinoprotein amine dehydrogenase 11
vWA-like TPR-like 11
Nucleic acid-binding proteins S-adenosyl-L-methionine-dependent methyltransferases 11
HAMP domain-like Nucleotide cyclase 11
Soluble quinoprotein glucose dehydrogenase Galactose-binding domain-like 11
HAMP domain-like PYP-like sensor domain (PAS domain) 11
alpha/beta-Hydrolases alpha/beta-Hydrolases 11
Histidine-containing phosphotransfer domain, HPT domain Histidine-containing phosphotransfer domain, HPT domain 11
Macro domain-like Zn-dependent exopeptidases 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 11
Homeodomain-like SIS domain 11
GAF domain-like CheY-like 11
RelE-like P-loop containing nucleoside triphosphate hydrolases 11
Zinc beta-ribbon Zinc beta-ribbon 11
P-loop containing nucleoside triphosphate hydrolases HRDC-like 11
UROD/MetE-like UROD/MetE-like 11
FAD/NAD(P)-binding domain Nitrite/Sulfite reductase N-terminal domain-like 11
Carbohydrate binding domain Galactose-binding domain-like 11
NAD(P)-binding Rossmann-fold domains CoA-dependent acyltransferases 11
Transcription factor NusA, N-terminal domain Rad51 N-terminal domain-like 11
Quinoprotein alcohol dehydrogenase-like Carboxypeptidase regulatory domain-like 11
Thiolase-like alpha/beta-Hydrolases 11
R1 subunit of ribonucleotide reductase, N-terminal domain PFL-like glycyl radical enzymes 11
Concanavalin A-like lectins/glucanases Type X cellulose binding domain, CBDX 11
Anthrax protective antigen Glycosyl hydrolase domain 11
Molybdenum cofactor biosynthesis proteins MoeA C-terminal domain-like 11
Zinc beta-ribbon DNA primase DnaG, C-terminal domain 11
NAD(P)-binding Rossmann-fold domains Tetrapyrrole methylase 11
GIY-YIG endonuclease RuvA domain 2-like 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
Nucleic acid-binding proteins Prokaryotic type KH domain (KH-domain type II) 11
FAD/NAD(P)-binding domain Nitrite and sulphite reductase 4Fe-4S domain-like 11
DNA primase core DNA primase DnaG, C-terminal domain 11
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 11
ClpP/crotonase ClpP/crotonase 11
Six-hairpin glycosidases PKD domain 11
GroEL equatorial domain-like GroEL apical domain-like 11
Dihydropteroate synthetase-like Cobalamin (vitamin B12)-binding domain 11
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 11
"Winged helix" DNA-binding domain Class II aaRS and biotin synthetases 11
YWTD domain YWTD domain 11
PKD domain Soluble quinoprotein glucose dehydrogenase 11
FAD/NAD(P)-binding domain HI0933 insert domain-like 11
TPR-like Acid proteases 11
Galactose-binding domain-like Lysozyme-like 11
FMN-binding split barrel UbiD C-terminal domain-like 11
Carbohydrate-binding domain Glycosyl hydrolases family 6, cellulases 11
Flagellar hook protein flgE Flagellar hook protein flgE 11
PK beta-barrel domain-like PK C-terminal domain-like 11
Nucleotide-diphospho-sugar transferases RmlC-like cupins 11
Galactose-binding domain-like Class I glutamine amidotransferase-like 11
Phase 1 flagellin Phase 1 flagellin 11
Thioredoxin-like GST C-terminal domain-like 11
Beta-D-glucan exohydrolase, C-terminal domain SGNH hydrolase 11
Translation proteins Translation proteins 11
DNA-glycosylase Nudix 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
Calcium-dependent phosphotriesterase Calcium-dependent phosphotriesterase 11
alpha-helical ferredoxin Nucleotide-binding domain 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
FMN-linked oxidoreductases Alpha subunit of glutamate synthase, C-terminal domain 11
PGBD-like L,D-transpeptidase catalytic domain-like 11
Concanavalin A-like lectins/glucanases (Trans)glycosidases 11
Thiolase-like CoA-dependent acyltransferases 11
Galactose-binding domain-like PKD domain 11
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 11
Cobalamin (vitamin B12)-binding domain Methionine synthase activation domain-like 11
Putative DNA-binding domain Translation proteins 11
Starch-binding domain-like Starch-binding domain-like 11
Galactose mutarotase-like Anthrax protective antigen 11
Thiolase-like FabD/lysophospholipase-like 11
DsbC/DsbG N-terminal domain-like Thioredoxin-like 11
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 11
Probable ACP-binding domain of malonyl-CoA ACP transacylase Inosine monophosphate dehydrogenase (IMPDH) 11
Class II aaRS and biotin synthetases YbaK/ProRS associated domain 11
Methionine synthase domain Methionine synthase activation domain-like 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 11
Nucleic acid-binding proteins DNA helicase RuvA subunit, C-terminal domain 11
Periplasmic binding protein-like II GAF domain-like 11
E set domains RCC1/BLIP-II 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
Nucleotidyltransferase substrate binding subunit/domain ACT-like 11
Siroheme synthase middle domains-like Tetrapyrrole methylase 11
Methylglyoxal synthase-like Cytidine deaminase-like 11
DNA clamp DNA clamp 11
2Fe-2S ferredoxin-like alpha-helical ferredoxin 11
Probable ACP-binding domain of malonyl-CoA ACP transacylase ACP-like 11
Translation proteins PRC-barrel domain 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphohistidine domain 11
PheT/TilS domain Putative DNA-binding domain 11
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
CheC-like Surface presentation of antigens (SPOA) 11
Concanavalin A-like lectins/glucanases Glycoside hydrolase/deacetylase 11
YbaK/ProRS associated domain HD-domain/PDEase-like 11
Periplasmic binding protein-like II HD-domain/PDEase-like 11
Quinoprotein alcohol dehydrogenase-like Quinoprotein alcohol dehydrogenase-like 11
PIN domain-like Ribonuclease H-like 11
Ribonuclease H-like HRDC-like 11
E set domains Soluble quinoprotein glucose dehydrogenase 11
Ribonuclease H-like Nucleic acid-binding proteins 11
Adenine nucleotide alpha hydrolases-like PheT/TilS domain 11
Terpenoid cyclases/Protein prenyltransferases Carboxypeptidase regulatory domain-like 11
Ferritin-like Calcium ATPase, transmembrane domain M 11
Class II aaRS and biotin synthetases C-terminal domain of transcriptional repressors 11
Ribonuclease H-like RuvA domain 2-like 11
Chorismate mutase II Periplasmic binding protein-like II 11
Starch-binding domain-like vWA-like 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
(Trans)glycosidases Anthrax protective antigen 11
Carbamate kinase-like ACT-like 11
Elongation factor Ts (EF-Ts), dimerisation domain Elongation factor Ts (EF-Ts), dimerisation domain 11
2Fe-2S ferredoxin-like CO dehydrogenase flavoprotein C-terminal domain-like 11
Alkaline phosphatase-like Type I dockerin domain 11
RBP11-like subunits of RNA polymerase C-terminal domain of RNA polymerase alpha subunit 11
PilZ domain-like PilZ domain-like 11
Formate dehydrogenase/DMSO reductase, domains 1-3 Ferredoxin reductase-like, C-terminal NADP-linked domain 11
RuvA domain 2-like RuvA domain 2-like 11
MesJ substrate recognition domain-like PheT/TilS domain 11
PheT/TilS domain Class II aaRS and biotin synthetases 11
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 11
Dihydropteroate synthetase-like Methionine synthase activation domain-like 11
Cadherin-like Galactose-binding domain-like 11
GAF domain-like Phosphohistidine domain 11
Protease propeptides/inhibitors E set domains 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphoenolpyruvate/pyruvate domain 11
Calcium-dependent phosphotriesterase Nucleotide cyclase 11
YjeF N-terminal domain-like Ribokinase-like 11
FAD-binding/transporter-associated domain-like alpha-helical ferredoxin 11
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 11
Leukotriene A4 hydrolase N-terminal domain Metalloproteases ("zincins"), catalytic domain 11
Protease propeptides/inhibitors Subtilisin-like 11
Tex N-terminal region-like RuvA domain 2-like 11
PheT/TilS domain Anticodon-binding domain of PheRS 11
Pectin lyase-like Cadherin-like 11
C-terminal effector domain of the bipartite response regulators TPR-like 11
Carbohydrate-binding domain Arabinanase/levansucrase/invertase 11
EAL domain-like CBS-domain pair 11
"Winged helix" DNA-binding domain Chorismate lyase-like 11
YceI-like Cytochrome c 11
Periplasmic binding protein-like II NosL/MerB-like 11
FGAM synthase PurL, linker domain PurM C-terminal domain-like 11
Resolvase-like Homeodomain-like 11
Purple acid phosphatase, N-terminal domain Metallo-dependent phosphatases 11
4'-phosphopantetheinyl transferase 4'-phosphopantetheinyl transferase 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase HSP90 C-terminal domain 11
Carbamate kinase-like PUA domain-like 11
Thioredoxin-like TPR-like 11
RNase III domain-like dsRNA-binding domain-like 11
Ribosomal protein L6 Ribosomal protein L6 11
Periplasmic binding protein-like II Lysozyme-like 11
YWTD domain Soluble quinoprotein glucose dehydrogenase 11
WD40 repeat-like Oligoxyloglucan reducing end-specific cellobiohydrolase 11
Type X cellulose binding domain, CBDX PKD domain 11
Type X cellulose binding domain, CBDX Glycosyl hydrolases family 6, cellulases 11
HIT-like HIT-like 11
"Winged helix" DNA-binding domain C-terminal domain of transcriptional repressors 11
Aspartate/glutamate racemase Aspartate/glutamate racemase 11
PurS-like Class I glutamine amidotransferase-like 11
CO dehydrogenase ISP C-domain like CO dehydrogenase flavoprotein C-terminal domain-like 11
N-terminal domain of MutM-like DNA repair proteins Glucocorticoid receptor-like (DNA-binding domain) 11
PurS-like FGAM synthase PurL, linker domain 11
Nucleotidyltransferase substrate binding subunit/domain Nucleotidyltransferase substrate binding subunit/domain 11
Homocysteine S-methyltransferase Methionine synthase activation domain-like 11
Subtilisin-like E set domains 11
FGAM synthase PurL, linker domain PurM N-terminal domain-like 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
Prokaryotic type KH domain (KH-domain type II) Rad51 N-terminal domain-like 11
Homocysteine S-methyltransferase Methionine synthase domain 11
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 11
SCP-like Clavaminate synthase-like 11
Methionine synthase domain Cobalamin (vitamin B12)-binding domain 11
2Fe-2S ferredoxin-like Ferredoxin reductase-like, C-terminal NADP-linked domain 11
Acetyl-CoA synthetase-like alpha/beta-Hydrolases 11
Starch-binding domain-like Carboxypeptidase regulatory domain-like 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 11
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 11
YWTD domain E set domains 11
LeuD/IlvD-like Aconitase iron-sulfur domain 11
YVTN repeat-like/Quinoprotein amine dehydrogenase Soluble quinoprotein glucose dehydrogenase 11
Barwin-like endoglucanases Sporulation related repeat 11
Terpenoid cyclases/Protein prenyltransferases Starch-binding domain-like 11
Sm-like ribonucleoproteins Mechanosensitive channel protein MscS (YggB), C-terminal domain 11
Putative DNA-binding domain Anticodon-binding domain of PheRS 11
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 11
Fibronectin type III Carboxypeptidase regulatory domain-like 11
PurS-like PurM N-terminal domain-like 11
RuvA domain 2-like BRCT domain 11
P-loop containing nucleoside triphosphate hydrolases PGBD-like 11
RCC1/BLIP-II RCC1/BLIP-II 11
PPK N-terminal domain-like PHP14-like 11
PKD domain Invasin/intimin cell-adhesion fragments 11
THUMP domain-like Rhodanese/Cell cycle control phosphatase 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
PUA domain-like S-adenosyl-L-methionine-dependent methyltransferases 11
Tex N-terminal region-like Nucleic acid-binding proteins 11
Adenine nucleotide alpha hydrolases-like MesJ substrate recognition domain-like 11
Cysteine proteinases TPR-like 11
Nucleotide cyclase TPR-like 11
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 11
S-adenosyl-L-methionine-dependent methyltransferases S-adenosyl-L-methionine-dependent methyltransferases 11
Pentapeptide repeat-like Nucleotide cyclase 11
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 11
Six-hairpin glycosidases Carbohydrate-binding domain 11
P-loop containing nucleoside triphosphate hydrolases Smc hinge domain 11
Galactose-binding domain-like Arabinanase/levansucrase/invertase 11
Nucleotidylyl transferase Ribosomal protein L25-like 11
5' to 3' exonuclease, C-terminal subdomain Ribonuclease H-like 11
(Trans)glycosidases SGNH hydrolase 11
E set domains Carbohydrate binding domain 11
Formate dehydrogenase/DMSO reductase, domains 1-3 Flavoproteins 11
Carbohydrate-binding domain Cytochrome c 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
P-loop containing nucleoside triphosphate hydrolases C-terminal UvrC-binding domain of UvrB 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 11
Pentapeptide repeat-like Pentapeptide repeat-like 11
Cytidine deaminase-like Dihydrofolate reductase-like 11
post-HMGL domain-like Single hybrid motif 11
gamma-Crystallin-like Lysozyme-like 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
lambda integrase-like, N-terminal domain DNA breaking-rejoining enzymes 11
Type X cellulose binding domain, CBDX Galactose-binding domain-like 11
Carboxypeptidase regulatory domain-like vWA-like 11
TGS-like Class II aaRS and biotin synthetases 11
Quinoprotein alcohol dehydrogenase-like PKD domain 11
ACT-like Formyltransferase 11
Homeodomain-like Methylated DNA-protein cysteine methyltransferase domain 11
Translation proteins Initiation factor IF2/eIF5b, domain 3 11
Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha) Thioredoxin-like 11
Aminopeptidase/glucanase lid domain Zn-dependent exopeptidases 11
Carbohydrate-binding domain Carbohydrate-binding domain 11
Succinyl-CoA synthetase domains Acyl-CoA N-acyltransferases (Nat) 11
Periplasmic binding protein-like II OmpA-like 11
Restriction endonuclease-like "Winged helix" DNA-binding domain 11
Homocysteine S-methyltransferase Dihydropteroate synthetase-like 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
DnaK suppressor protein DksA, alpha-hairpin domain Glucocorticoid receptor-like (DNA-binding domain) 11
Dimeric alpha+beta barrel Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 11
Starch-binding domain-like E set domains 11
FabD/lysophospholipase-like CoA-dependent acyltransferases 11
Multiheme cytochromes ARM repeat 11
Prokaryotic type I DNA topoisomerase Zinc beta-ribbon 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleic acid-binding proteins 11
Nucleic acid-binding proteins GAD domain-like 11
Tricorn protease domain 2 alpha/beta-Hydrolases 11
Cadherin-like PKD domain 11
ARM repeat TPR-like 11
PreATP-grasp domain Methylglyoxal synthase-like 11
Rho N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
Glutamyl tRNA-reductase catalytic, N-terminal domain NAD(P)-binding Rossmann-fold domains 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Alpha subunit of glutamate synthase, C-terminal domain 11
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 11
Pili subunits GspK insert domain-like 11
Rad51 N-terminal domain-like Rad51 N-terminal domain-like 11
YbaK/ProRS associated domain Class II aaRS ABD-related 11
Carbohydrate-binding domain Barwin-like endoglucanases 11
FAD-binding/transporter-associated domain-like Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 11
Peptide methionine sulfoxide reductase Mss4-like 11
GroEL equatorial domain-like GroEL-intermediate domain like 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 11
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 11
Putative DNA-binding domain Initiation factor IF2/eIF5b, domain 3 11
Tex N-terminal region-like Ribonuclease H-like 11
Carboxypeptidase regulatory domain-like Carboxypeptidase regulatory domain-like 11
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 11
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 11
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
Ferritin-like Calcium ATPase, transduction domain A 11
Oligoxyloglucan reducing end-specific cellobiohydrolase Type X cellulose binding domain, CBDX 11
Pectin lyase-like OMPA-like 11
Integrin alpha N-terminal domain Carbohydrate-binding domain 11
FliG FliG 11
FAD-binding/transporter-associated domain-like CO dehydrogenase flavoprotein C-terminal domain-like 11
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 11
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 11
Galactose mutarotase-like E set domains 11
EspE N-terminal domain-like Galactose-binding domain-like 11
gp5 N-terminal domain-like Phage fibre proteins 11
Carbohydrate-binding domain Family 10 polysaccharide lyase 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleotidylyl transferase 11
Ribokinase-like Nucleotidylyl transferase 11
P-loop containing nucleoside triphosphate hydrolases TrpR-like 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
NAD(P)-binding Rossmann-fold domains Acyl-CoA N-acyltransferases (Nat) 11
Tryptophan synthase beta subunit-like PLP-dependent enzymes ACT-like 11
Nucleic acid-binding proteins Putative DNA-binding domain 11
CoA-dependent acyltransferases alpha/beta-Hydrolases 11
MFS general substrate transporter S-adenosyl-L-methionine-dependent methyltransferases 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
Cytochrome c oxidase subunit II-like, transmembrane region Cytochrome c 11
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 11
Homeodomain-like Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
NAD(P)-binding Rossmann-fold domains Glutamyl tRNA-reductase dimerization domain 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
Pheromone-binding domain of LuxR-like quorum-sensing transcription factors C-terminal effector domain of the bipartite response regulators 11
Transcription factor NusA, N-terminal domain Prokaryotic type KH domain (KH-domain type II) 11
Succinyl-CoA synthetase domains Succinyl-CoA synthetase domains 11
NagB/RpiA/CoA transferase-like D-ribose-5-phosphate isomerase (RpiA), lid domain 11
CO dehydrogenase ISP C-domain like FAD-binding/transporter-associated domain-like 11
Oligoxyloglucan reducing end-specific cellobiohydrolase Carbohydrate-binding domain 11
THUMP domain-like Adenine nucleotide alpha hydrolases-like 11
Nucleotidylyl transferase Nucleic acid-binding proteins 11
DNA ligase/mRNA capping enzyme, catalytic domain RuvA domain 2-like 11
C-type lectin-like S-adenosyl-L-methionine-dependent methyltransferases 11
WD40 repeat-like Sialidases 11
MoeA N-terminal region -like MoeA C-terminal domain-like 11
Type X cellulose binding domain, CBDX Barwin-like endoglucanases 11
Class I glutamine amidotransferase-like Homeodomain-like 11
Periplasmic binding protein-like II ACT-like 11
S-adenosyl-L-methionine-dependent methyltransferases Clavaminate synthase-like 11
Periplasmic binding protein-like I Nucleotide cyclase 11
P-loop containing nucleoside triphosphate hydrolases CarD-like 11
YWTD domain Quinoprotein alcohol dehydrogenase-like 11
TerB-like Chaperone J-domain 11
Homeodomain-like Homeodomain-like 11
Histidine-containing phosphotransfer domain, HPT domain Nucleotide cyclase 11
Class II aaRS and biotin synthetases GAD domain-like 11
ADC-like Flavoproteins 11
PKD domain Cytochrome c 11
Starch-binding domain-like Porins 11
Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), C-terminal domain 11
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 11
WD40 repeat-like Carboxypeptidase regulatory domain-like 11
Metalloproteases ("zincins"), catalytic domain Galactose-binding domain-like 11
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 11
EF-hand EF-hand 11
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 11
Nucleic acid-binding proteins ArfGap/RecO-like zinc finger 11
Protein kinase-like (PK-like) C-type lectin-like 11
Periplasmic binding protein-like II EAL domain-like 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
YVTN repeat-like/Quinoprotein amine dehydrogenase Quinoprotein alcohol dehydrogenase-like 11
PUA domain-like alpha/beta knot 11
Invasin/intimin cell-adhesion fragments Cytochrome c 11
ADC-like Ferredoxin reductase-like, C-terminal NADP-linked domain 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
Carbohydrate-binding domain beta-N-acetylhexosaminidase-like domain 11
FGAM synthase PurL, linker domain Class I glutamine amidotransferase-like 11
NAD(P)-binding Rossmann-fold domains Siroheme synthase middle domains-like 11
Aconitase B, N-terminal domain LeuD/IlvD-like 11
Nudix Nudix 11
CheY-like TPR-like 11
Translation proteins ThrRS/AlaRS common domain 11
Sigma2 domain of RNA polymerase sigma factors FAD/NAD(P)-binding domain 11
Probable ACP-binding domain of malonyl-CoA ACP transacylase NAD(P)-binding Rossmann-fold domains 11
Protein kinase-like (PK-like) (Trans)glycosidases 11
S13-like H2TH domain Glucocorticoid receptor-like (DNA-binding domain) 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11
CarD-like TRCF domain-like 11
Nucleic acid-binding proteins BRCT domain 11
lambda repressor-like DNA-binding domains Cyanase C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases Restriction endonuclease-like 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
Nudix "Winged helix" DNA-binding domain 11
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 11
Outer membrane efflux proteins (OEP) OmpA-like 11
Dihydropteroate synthetase-like Methionine synthase domain 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) Methylated DNA-protein cysteine methyltransferase domain 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
Adenine nucleotide alpha hydrolases-like Rhodanese/Cell cycle control phosphatase 11
TolB, N-terminal domain Tricorn protease N-terminal domain 11
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 11
Cadherin-like WD40 repeat-like 11
Thiolase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 11
Zinc beta-ribbon DNA primase core 11
2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain Alkaline phosphatase-like 11
ACT-like HAD-like 11
TrkA C-terminal domain-like FAD-binding/transporter-associated domain-like 11
Glycoside hydrolase/deacetylase Type X cellulose binding domain, CBDX 11
PKD domain Carboxypeptidase regulatory domain-like 11
Homo-oligomeric flavin-containing Cys decarboxylases, HFCD CoaB-like 11
EAL domain-like HD-domain/PDEase-like 11
Soluble quinoprotein glucose dehydrogenase Class I glutamine amidotransferase-like 11
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 11
Rho N-terminal domain-like Nucleic acid-binding proteins 11
Cadherin-like beta-Roll 11
Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 11
HCP-like TPR-like 11
Pseudouridine synthase PUA domain-like 11
FucI/AraA N-terminal and middle domains FucI/AraA C-terminal domain-like 11
Glutamyl tRNA-reductase catalytic, N-terminal domain Glutamyl tRNA-reductase dimerization domain 11
HesB-like domain Fe-S cluster assembly (FSCA) domain-like 11
Adenine nucleotide alpha hydrolases-like Adenine nucleotide alpha hydrolases-like 11
Lysozyme-like LysM domain 11
HD-domain/PDEase-like HD-domain/PDEase-like 11
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Cryptochrome/photolyase, N-terminal domain Cryptochrome/photolyase FAD-binding domain 11
RuvA domain 2-like JAB1/MPN domain 11
Glutamine synthetase/guanido kinase GatB/YqeY motif 11
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 11
FKBP-like FKBP-like 11
Soluble quinoprotein glucose dehydrogenase Invasin/intimin cell-adhesion fragments 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
E set domains Quinoprotein alcohol dehydrogenase-like 11
Terpenoid cyclases/Protein prenyltransferases vWA-like 11
ADC-like Riboflavin synthase domain-like 11
GroES-like CoA-dependent acyltransferases 11
PLP-dependent transferases PLP-dependent transferases 11
FabD/lysophospholipase-like ACP-like 11
Soluble quinoprotein glucose dehydrogenase Quinoprotein alcohol dehydrogenase-like 11
MFS general substrate transporter NfeD domain-like 11
Sensory domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11

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