SUPERFAMILY 1.75 HMM library and genome assignments server

Domain combination pairs in Desulfatibacillum alkenivorans AK-01

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

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Adjacent domain pairs graph

Graph of adjacent domain pairs.


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Domain combination pairs

912 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 12062
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 9352
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 8746
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheY-like 7543
Homodimeric domain of signal transducing histidine kinase CheY-like 7240
PYP-like sensor domain (PAS domain) CheY-like 6536
PYP-like sensor domain (PAS domain) PYP-like sensor domain (PAS domain) 6039
Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase C-terminal domain-like 533
Homeodomain-like Tetracyclin repressor-like, C-terminal domain 505
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 3714
Thiolase-like Thiolase-like 276
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 2413
TPR-like TPR-like 219
Actin-like ATPase domain Actin-like ATPase domain 197
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 186
CheY-like CheY-like 1715
CheY-like P-loop containing nucleoside triphosphate hydrolases 163
GAF domain-like PYP-like sensor domain (PAS domain) 1614
GAF domain-like Homodimeric domain of signal transducing histidine kinase 1613
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 165
GAF domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 1613
GAF domain-like CheY-like 1512
HAMP domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 159
CheY-like Homeodomain-like 152
HAMP domain-like Homodimeric domain of signal transducing histidine kinase 148
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 135
PYP-like sensor domain (PAS domain) Homeodomain-like 137
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 134
PYP-like sensor domain (PAS domain) P-loop containing nucleoside triphosphate hydrolases 137
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Histidine-containing phosphotransfer domain, HPT domain 1212
Succinyl-CoA synthetase domains Succinyl-CoA synthetase domains 123
Homeodomain-like Homeodomain-like 127
Formate dehydrogenase/DMSO reductase, domains 1-3 ADC-like 122
Cobalamin (vitamin B12)-binding domain Radical SAM enzymes 113
CheY-like C-terminal effector domain of the bipartite response regulators 102
FAD/NAD(P)-binding domain 4Fe-4S ferredoxins 1010
Homodimeric domain of signal transducing histidine kinase Histidine-containing phosphotransfer domain, HPT domain 1010
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 101
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 105
GAF domain-like P-loop containing nucleoside triphosphate hydrolases 107
P-loop containing nucleoside triphosphate hydrolases Translation proteins 106
HAMP domain-like PYP-like sensor domain (PAS domain) 97
CheY-like Histidine-containing phosphotransfer domain, HPT domain 99
ClpP/crotonase ClpP/crotonase 92
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein S5 domain 2-like 96
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 94
Glutathione synthetase ATP-binding domain-like Succinyl-CoA synthetase domains 93
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 83
CheY-like Nucleotide cyclase 84
Metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 86
P-loop containing nucleoside triphosphate hydrolases TPR-like 88
Glutathione synthetase ATP-binding domain-like NAD(P)-binding Rossmann-fold domains 82
alpha-helical ferredoxin Nucleotide-binding domain 88
PYP-like sensor domain (PAS domain) Histidine-containing phosphotransfer domain, HPT domain 77
ACT-like ACT-like 73
Thioesterase/thiol ester dehydrase-isomerase Thioesterase/thiol ester dehydrase-isomerase 73
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 77
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 76
GAF domain-like Homeodomain-like 74
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 72
CheY-like HD-domain/PDEase-like 73
Chemotaxis receptor methyltransferase CheR, N-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 72
HAMP domain-like PP2C-like 72
Periplasmic binding protein-like II ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 66
4Fe-4S ferredoxins Radical SAM enzymes 61
Aldehyde ferredoxin oxidoreductase, N-terminal domain Aldehyde ferredoxin oxidoreductase, C-terminal domains 61
Nucleotide-binding domain 4Fe-4S ferredoxins 66
PLP-binding barrel Alanine racemase C-terminal domain-like 62
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 64
FKBP-like Triger factor/SurA peptide-binding domain-like 63
4Fe-4S ferredoxins FMN-dependent nitroreductase-like 61
EspE N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 64
Translation proteins EF-G C-terminal domain-like 63
NagB/RpiA/CoA transferase-like NagB/RpiA/CoA transferase-like 62
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 63
Periplasmic binding protein-like II Homodimeric domain of signal transducing histidine kinase 66
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 64
Sm-like ribonucleoproteins Mechanosensitive channel protein MscS (YggB), C-terminal domain 52
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 52
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 53
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 52
Sensory domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 54
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 55
FMN-linked oxidoreductases FAD/NAD(P)-binding domain 52
Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), C-terminal domain 52
PurM N-terminal domain-like PurM C-terminal domain-like 52
Flavoproteins 4Fe-4S ferredoxins 51
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 52
EF-G C-terminal domain-like EF-G C-terminal domain-like 52
Periplasmic binding protein-like II PYP-like sensor domain (PAS domain) 55
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 52
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 52
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB transmembrane domain 52
alpha-helical ferredoxin alpha-helical ferredoxin 54
lambda repressor-like DNA-binding domains RmlC-like cupins 53
GroES-like NAD(P)-binding Rossmann-fold domains 52
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 52
CheY-like Periplasmic binding protein-like II 55
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB transmembrane domain 52
Respiratory nitrate reductase 1 gamma chain alpha-helical ferredoxin 53
GAF domain-like Nucleotide cyclase 54
2Fe-2S ferredoxin-like 4Fe-4S ferredoxins 53
GAF domain-like HD-domain/PDEase-like 53
FAD/NAD(P)-binding domain Nucleotide-binding domain 55
PYP-like sensor domain (PAS domain) C-terminal effector domain of the bipartite response regulators 53
Adenine nucleotide alpha hydrolases-like DHS-like NAD/FAD-binding domain 52
NAD(P)-binding Rossmann-fold domains TrkA C-terminal domain-like 54
PreATP-grasp domain Rudiment single hybrid motif 44
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 43
cAMP-binding domain-like "Winged helix" DNA-binding domain 41
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 43
NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains 44
Nqo1 FMN-binding domain-like Nqo1 middle domain-like 43
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 41
Sensory domain-like Homodimeric domain of signal transducing histidine kinase 43
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 43
TSP type-3 repeat OmpA-like 42
TPR-like GAF domain-like 44
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheW-like 44
Ferritin-like Rubredoxin-like 41
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 44
Calcium-dependent phosphotriesterase Calcium-dependent phosphotriesterase 44
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 43
Pectin lyase-like Pectin lyase-like 44
alpha-helical ferredoxin 4Fe-4S ferredoxins 44
"Winged helix" DNA-binding domain GntR ligand-binding domain-like 41
CheY-like Methylesterase CheB, C-terminal domain 41
Histidine-containing phosphotransfer domain, HPT domain CheW-like 44
PYP-like sensor domain (PAS domain) Nucleotide cyclase 42
"Winged helix" DNA-binding domain Periplasmic binding protein-like II 41
Methionine synthase domain Cobalamin (vitamin B12)-binding domain 42
"Winged helix" DNA-binding domain Chorismate lyase-like 41
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 43
HlyD-like secretion proteins HlyD-like secretion proteins 43
PKD domain Calcium-dependent phosphotriesterase 33
Lysozyme-like beta-lactamase/transpeptidase-like 33
Protein kinase-like (PK-like) cAMP-binding domain-like 32
6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 32
FAD/NAD(P)-binding domain alpha-helical ferredoxin 33
vWA-like OmpA-like 31
Zinc beta-ribbon DNA primase core 32
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 31
cAMP-binding domain-like cAMP-binding domain-like 33
Class II aaRS and biotin synthetases Class II aaRS ABD-related 33
RCC1/BLIP-II TSP type-3 repeat 33
2Fe-2S ferredoxin-like Actin-like ATPase domain 31
Cobalamin (vitamin B12)-binding domain Cobalamin (vitamin B12)-dependent enzymes 32
Acyl-CoA N-acyltransferases (Nat) Acyl-CoA N-acyltransferases (Nat) 32
2Fe-2S ferredoxin-like ADC-like 31
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 33
Integrin alpha N-terminal domain Integrin alpha N-terminal domain 32
P-loop containing nucleoside triphosphate hydrolases Nucleotide cyclase 33
MurCD N-terminal domain MurD-like peptide ligases, peptide-binding domain 31
TK C-terminal domain-like 4Fe-4S ferredoxins 32
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 31
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 33
Trypsin-like serine proteases PDZ domain-like 32
Sensory domain-like HAMP domain-like 32
HAMP domain-like CheY-like 33
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 31
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 32
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 32
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 32
Thioredoxin-like Nqo1 middle domain-like 32
Phospholipase D/nuclease Phospholipase D/nuclease 31
EF-G C-terminal domain-like Ribosomal protein S5 domain 2-like 31
PUA domain-like Ribosomal protein S5 domain 2-like 32
4Fe-4S ferredoxins ADC-like 31
Nucleotide-binding domain Nucleotide-binding domain 33
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 32
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 32
Nqo1 middle domain-like Nqo1C-terminal domain-like 32
Transposase IS200-like TrpR-like 31
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 33
NAD(P)-binding Rossmann-fold domains UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 33
Chaperone J-domain HSP40/DnaJ peptide-binding domain 33
Aspartate/glutamate racemase Aspartate/glutamate racemase 31
Nqo1 FMN-binding domain-like alpha-helical ferredoxin 33
6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 33
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 32
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 33
Thioredoxin-like Nqo1C-terminal domain-like 32
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 31
Translation proteins Ribosomal protein S5 domain 2-like 31
4Fe-4S ferredoxins Formate dehydrogenase/DMSO reductase, domains 1-3 31
Fibronectin type III Fibronectin type III 33
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 32
2Fe-2S ferredoxin-like Formate dehydrogenase/DMSO reductase, domains 1-3 31
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 32
Thiamin diphosphate-binding fold (THDP-binding) 4Fe-4S ferredoxins 32
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 32
Nitrite and sulphite reductase 4Fe-4S domain-like 4Fe-4S ferredoxins 32
vWA-like TSP type-3 repeat 31
Nucleic acid-binding proteins RuvA domain 2-like 33
Thioredoxin-like Nqo1 FMN-binding domain-like 32
MurCD N-terminal domain MurD-like peptide ligases, catalytic domain 31
Tetracyclin repressor-like, C-terminal domain Tetracyclin repressor-like, C-terminal domain 31
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 32
4Fe-4S ferredoxins 4Fe-4S ferredoxins 33
TPR-like Homeodomain-like 33
Nqo1 FMN-binding domain-like Nqo1C-terminal domain-like 32
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 33
Enolase N-terminal domain-like Enolase C-terminal domain-like 32
Sensory domain-like PYP-like sensor domain (PAS domain) 33
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 32
Metallo-hydrolase/oxidoreductase Flavoproteins 21
Calcium-dependent phosphotriesterase Type I dockerin domain 22
PUA domain-like Nucleotidylyl transferase 22
Aldolase post-HMGL domain-like 21
Chemotaxis receptor methyltransferase CheR, N-terminal domain PYP-like sensor domain (PAS domain) 21
PreATP-grasp domain PreATP-grasp domain 21
Rhodanese/Cell cycle control phosphatase Rhodanese/Cell cycle control phosphatase 22
P-loop containing nucleoside triphosphate hydrolases MOP-like 21
Acyl-CoA N-acyltransferases (Nat) Carbon-nitrogen hydrolase 21
cAMP-binding domain-like Nucleotide cyclase 21
HAMP domain-like Methyl-accepting chemotaxis protein (MCP) signaling domain 22
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 22
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 22
Fibronectin type III C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase 22
NAD(P)-binding Rossmann-fold domains SCP-like 22
HD-domain/PDEase-like ACT-like 22
Ribonuclease H-like mu transposase, C-terminal domain 22
EAL domain-like Nucleotide cyclase 22
(Trans)glycosidases Glycosyl hydrolase domain 22
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphohistidine domain 22
PYP-like sensor domain (PAS domain) PP2C-like 22
Nucleotide cyclase TPR-like 22
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 21
P-loop containing nucleoside triphosphate hydrolases CBS-domain pair 22
TPR-like Sporulation related repeat 22
Respiratory nitrate reductase 1 gamma chain Respiratory nitrate reductase 1 gamma chain 21
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 21
Nucleotidylyl transferase P-loop containing nucleoside triphosphate hydrolases 22
CBS-domain pair MgtE membrane domain-like 21
Cadherin-like Fibronectin type III 22
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 21
Lysozyme-like LysM domain 22
PKD domain Carboxypeptidase regulatory domain-like 22
Voltage-gated potassium channels NAD(P)-binding Rossmann-fold domains 21
Thiolase-like NAD(P)-binding Rossmann-fold domains 22
Multidrug efflux transporter AcrB transmembrane domain Nucleotide cyclase 21
DHH phosphoesterases CBS-domain pair 22
Fibronectin type III Carboxypeptidase regulatory domain-like 22
DNA clamp DNA clamp 21
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 22
"Winged helix" DNA-binding domain PLP-dependent transferases 21
CheY-like CheW-like 22
Trm112p-like S-adenosyl-L-methionine-dependent methyltransferases 21
P-loop containing nucleoside triphosphate hydrolases Restriction endonuclease-like 22
Putative DNA-binding domain mu transposase, C-terminal domain 22
Staphylococcal nuclease Ada DNA repair protein, N-terminal domain (N-Ada 10) 21
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphoenolpyruvate/pyruvate domain 22
Class I glutamine amidotransferase-like Homeodomain-like 21
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 21
Methylesterase CheB, C-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 21
Nucleotidyltransferase Nucleotidyltransferase substrate binding subunit/domain 22
Cadherin-like Cadherin-like 22
CheY-like PP2C-like 22
"Winged helix" DNA-binding domain C-terminal domain of transcriptional repressors 22
post-HMGL domain-like Single hybrid motif 21
Putative DNA-binding domain Ribonuclease H-like 22
Histidine-containing phosphotransfer domain, HPT domain EspE N-terminal domain-like 22
Thiolase-like FabD/lysophospholipase-like 22
Multidrug efflux transporter AcrB transmembrane domain cAMP-binding domain-like 21
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 21
"Winged helix" DNA-binding domain S-adenosyl-L-methionine-dependent methyltransferases 21
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 21
Penicillin binding protein dimerisation domain beta-lactamase/transpeptidase-like 21
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 22
Nucleotidyltransferase ACT-like 22
EspE N-terminal domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 22
Periplasmic binding protein-like II Periplasmic binding protein-like II 22
MoeA N-terminal region -like MoeA C-terminal domain-like 22
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 22
Formyltransferase FMT C-terminal domain-like 21
Methylesterase CheB, C-terminal domain PYP-like sensor domain (PAS domain) 21
Alpha-L RNA-binding motif Pseudouridine synthase 21
Periplasmic binding protein-like II Lysozyme-like 22
ARM repeat ARM repeat 22
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 21
tRNA-binding arm Class II aaRS and biotin synthetases 21
Homodimeric domain of signal transducing histidine kinase CheW-like 22
Homodimeric domain of signal transducing histidine kinase Nucleotide cyclase 22
Carbamate kinase-like ACT-like 22
Methylesterase CheB, C-terminal domain Chemotaxis receptor methyltransferase CheR, N-terminal domain 21
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 21
FAD/NAD(P)-binding domain Rhodanese/Cell cycle control phosphatase 22
Nqo1 middle domain-like 4Fe-4S ferredoxins 21
Collagen-binding domain Invasin/intimin cell-adhesion fragments 22
Nucleic acid-binding proteins Nucleic acid-binding proteins 22
Nucleotidyltransferase HD-domain/PDEase-like 22
Carbon-nitrogen hydrolase Adenine nucleotide alpha hydrolases-like 22
HAD-like Calcium ATPase, transmembrane domain M 22
S-adenosyl-L-methionine-dependent methyltransferases PYP-like sensor domain (PAS domain) 21
MgtE N-terminal domain-like CBS-domain pair 21
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 21
MoeA N-terminal region -like Molybdenum cofactor biosynthesis proteins 22
Putative DNA-binding domain Homeodomain-like 22
Aldolase Single hybrid motif 21
cAMP-binding domain-like PilZ domain-like 21
Nqo1C-terminal domain-like 4Fe-4S ferredoxins 21
MgtE N-terminal domain-like MgtE membrane domain-like 21
Type I dockerin domain NHL repeat 22
TSP type-3 repeat TSP type-3 repeat 22
Clc chloride channel CBS-domain pair 21
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 21
CcmK-like CcmK-like 22
Type I dockerin domain Concanavalin A-like lectins/glucanases 22
GAF domain-like PP2C-like 22
FAD/NAD-linked reductases, dimerisation (C-terminal) domain Rhodanese/Cell cycle control phosphatase 22
Molybdenum cofactor biosynthesis proteins MoeA C-terminal domain-like 22
HCP-like HCP-like 22
Protein kinase-like (PK-like) P-loop containing nucleoside triphosphate hydrolases 22
Calcium ATPase, transduction domain A HAD-like 22
Aldolase AFP III-like domain 21
Voltage-gated potassium channels TrkA C-terminal domain-like 21
PreATP-grasp domain Methylglyoxal synthase-like 21
Nqo1 FMN-binding domain-like 4Fe-4S ferredoxins 21
Thioredoxin-like 4Fe-4S ferredoxins 21
N-terminal domain of DnaB helicase P-loop containing nucleoside triphosphate hydrolases 21
EspE N-terminal domain-like CheW-like 22
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 22
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 21
Periplasmic binding protein-like II GAF domain-like 22
Pectin lyase-like Cadherin-like 22
Translation proteins SH3-like domain Nucleic acid-binding proteins 22
Thiolase-like Nucleic acid-binding proteins 22
NagB/RpiA/CoA transferase-like Acyl-CoA N-acyltransferases (Nat) 21
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 22
HAMP domain-like Histidine-containing phosphotransfer domain, HPT domain 22
RCC1/BLIP-II RCC1/BLIP-II 22
Nucleotidyltransferase Poly A polymerase C-terminal region-like 22
Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases 21
NAD(P)-binding Rossmann-fold domains ACT-like 22
Nqo1 middle domain-like alpha-helical ferredoxin 22
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 21
CheY-like CBS-domain pair 22
PDZ domain-like ClpP/crotonase 22
Lamin A/C globular tail domain Lamin A/C globular tail domain 22
Cysteine proteinases Fibronectin type III 22
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 22
Calcium-dependent phosphotriesterase Carboxypeptidase regulatory domain-like 22
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
P-loop containing nucleoside triphosphate hydrolases vWA-like 22
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 22
Nitrite/Sulfite reductase N-terminal domain-like 4Fe-4S ferredoxins 21
ThrRS/AlaRS common domain Class II aaRS and biotin synthetases 22
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 21
lambda repressor-like DNA-binding domains LexA/Signal peptidase 21
Periplasmic binding protein-like II GlnB-like 11
TPR-like Periplasmic binding protein-like I 11
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 11
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 11
C-terminal UvrC-binding domain of UvrB RuvA domain 2-like 11
Periplasmic binding protein-like II ACT-like 11
Prokaryotic type KH domain (KH-domain type II) Prokaryotic type KH domain (KH-domain type II) 11
Concanavalin A-like lectins/glucanases EF-hand 11
5' to 3' exonuclease, C-terminal subdomain DNA/RNA polymerases 11
YWTD domain YWTD domain 11
SufE/NifU Fe-S cluster assembly (FSCA) domain-like 11
SCP-like SCP-like 11
Swiveling domain of dehydratase reactivase alpha subunit Actin-like ATPase domain 11
Probable ACP-binding domain of malonyl-CoA ACP transacylase NAD(P)-binding Rossmann-fold domains 11
Aconitase iron-sulfur domain LeuD/IlvD-like 11
Putative isomerase YbhE Concanavalin A-like lectins/glucanases 11
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 11
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 11
P-loop containing nucleoside triphosphate hydrolases Cobalamin (vitamin B12)-dependent enzymes 11
Nucleotidyltransferase Nucleotidyltransferase 11
alpha/beta-Hydrolases alpha/beta-Hydrolases 11
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 11
NTF2-like Sec-C motif 11
Rho N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
DNA-glycosylase Nudix 11
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 11
Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 11
MetI-like P-loop containing nucleoside triphosphate hydrolases 11
Fibronectin type III Concanavalin A-like lectins/glucanases 11
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 11
Eukaryotic type KH-domain (KH-domain type I) HD-domain/PDEase-like 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
"Winged helix" DNA-binding domain NAD(P)-binding Rossmann-fold domains 11
YhbC-like, N-terminal domain YhbC-like, C-terminal domain 11
Galactose-binding domain-like Type I dockerin domain 11
Rudiment single hybrid motif ClpP/crotonase 11
4Fe-4S ferredoxins ARM repeat 11
"Winged helix" DNA-binding domain GAF domain-like 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 11
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 11
Molybdenum cofactor biosynthesis proteins CinA-like 11
Carboxypeptidase regulatory domain-like C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase 11
E set domains E set domains 11
Peptide methionine sulfoxide reductase Mss4-like 11
Ribokinase-like Nucleotidylyl transferase 11
RuvA domain 2-like RuvA domain 2-like 11
MesJ substrate recognition domain-like PheT/TilS domain 11
Nqo1 middle domain-like Nucleotide-binding domain 11
Thioredoxin-like Six-hairpin glycosidases 11
PHP domain-like P-loop containing nucleoside triphosphate hydrolases 11
MoeA C-terminal domain-like Periplasmic binding protein-like II 11
Homeodomain-like mu transposase, C-terminal domain 11
ARM repeat Sec-C motif 11
Collagen-binding domain Collagen-binding domain 11
Class I glutamine amidotransferase-like LD-carboxypeptidase A C-terminal domain-like 11
Concanavalin A-like lectins/glucanases Calcium-dependent phosphotriesterase 11
Chorismate mutase II ACT-like 11
GroES-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
Putative isomerase YbhE Invasin/intimin cell-adhesion fragments 11
CBS-domain pair Nucleotidyltransferase 11
Diaminopimelate epimerase-like Diaminopimelate epimerase-like 11
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
cAMP-binding domain-like FabD/lysophospholipase-like 11
Trigger factor ribosome-binding domain FKBP-like 11
Nucleotidyltransferase substrate binding subunit/domain Nucleotidyltransferase substrate binding subunit/domain 11
Invasin/intimin cell-adhesion fragments EF-hand 11
Zinc beta-ribbon Zinc beta-ribbon 11
UROD/MetE-like Cobalamin (vitamin B12)-binding domain 11
Homo-oligomeric flavin-containing Cys decarboxylases, HFCD CoaB-like 11
Rubredoxin-like Rubredoxin-like 11
Translation proteins Initiation factor IF2/eIF5b, domain 3 11
GAF domain-like Phosphoenolpyruvate/pyruvate domain 11
CBS-domain pair ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
TPR-like HCP-like 11
Cysteine proteinases Caspase-like 11
SMAD/FHA domain SMAD/FHA domain 11
(Trans)glycosidases Six-hairpin glycosidases 11
all-alpha NTP pyrophosphatases all-alpha NTP pyrophosphatases 11
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 11
Pentapeptide repeat-like Toll/Interleukin receptor TIR domain 11
Ribosomal protein S5 domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
Putative DNA-binding domain CheY-like 11
P-loop containing nucleoside triphosphate hydrolases Smc hinge domain 11
Prokaryotic type KH domain (KH-domain type II) Rad51 N-terminal domain-like 11
L9 N-domain-like Ribosomal protein L9 C-domain 11
NHL repeat Concanavalin A-like lectins/glucanases 11
ALDH-like Dehydroquinate synthase-like 11
Multidrug efflux transporter AcrB transmembrane domain Homodimeric domain of signal transducing histidine kinase 11
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 11
Invasin/intimin cell-adhesion fragments Invasin/intimin cell-adhesion fragments 11
Rhomboid-like HSP40/DnaJ peptide-binding domain 11
P-loop containing nucleoside triphosphate hydrolases Phospholipase D/nuclease 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
CBS-domain pair Homeodomain-like 11
Cobalamin (vitamin B12)-binding domain TPR-like 11
Nucleic acid-binding proteins SCP-like 11
4Fe-4S ferredoxins P-loop containing nucleoside triphosphate hydrolases 11
DHS-like NAD/FAD-binding domain TPR-like 11
DHH phosphoesterases Nucleotidyltransferase 11
Homeodomain-like NAD(P)-binding Rossmann-fold domains 11
YWTD domain Concanavalin A-like lectins/glucanases 11
Nucleotide-diphospho-sugar transferases Radical SAM enzymes 11
Radical SAM enzymes TPR-like 11
Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 4Fe-4S ferredoxins 11
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 11
"Winged helix" DNA-binding domain Class II aaRS and biotin synthetases 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
Thioredoxin-like Bet v1-like 11
Prokaryotic type I DNA topoisomerase Zinc beta-ribbon 11
NagB/RpiA/CoA transferase-like alpha-helical ferredoxin 11
GAF domain-like EspE N-terminal domain-like 11
NHL repeat NHL repeat 11
Nucleotidylyl transferase tRNA-binding arm 11
Nucleic acid-binding proteins Prokaryotic type KH domain (KH-domain type II) 11
PheT/TilS domain Anticodon-binding domain of PheRS 11
Putative isomerase YbhE Collagen-binding domain 11
Protein kinase-like (PK-like) PYP-like sensor domain (PAS domain) 11
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 11
EspE N-terminal domain-like HD-domain/PDEase-like 11
PreATP-grasp domain Single hybrid motif 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 11
Radical SAM enzymes Nitrogenase accessory factor-like 11
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 11
TGS-like ThrRS/AlaRS common domain 11
Adenine nucleotide alpha hydrolases-like lambda repressor-like DNA-binding domains 11
GAF domain-like GAF domain-like 11
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 11
Radical SAM enzymes Sec-C motif 11
DNA ligase/mRNA capping enzyme, catalytic domain RuvA domain 2-like 11
Nucleotide cyclase ARM repeat 11
Ankyrin repeat Ankyrin repeat 11
HMA, heavy metal-associated domain HMA, heavy metal-associated domain 11
Nucleic acid-binding proteins NAD(P)-binding Rossmann-fold domains 11
SirA-like DsrEFH-like 11
DPP6 N-terminal domain-like Tricorn protease N-terminal domain 11
ACP-like ACP-like 11
Translation proteins "Winged helix" DNA-binding domain 11
GIY-YIG endonuclease RuvA domain 2-like 11
Metallo-hydrolase/oxidoreductase cAMP-binding domain-like 11
CBS-domain pair Nucleotide cyclase 11
NHL repeat PKD domain 11
Thiolase-like Thioesterase/thiol ester dehydrase-isomerase 11
Protein kinase-like (PK-like) HD-domain/PDEase-like 11
Carboxypeptidase regulatory domain-like Hypothetical protein PA1324 11
TrkA C-terminal domain-like TrkA C-terminal domain-like 11
Flagellar hook protein flgE Flagellar hook protein flgE 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 11
Homeodomain-like Probable bacterial effector-binding domain 11
Riboflavin synthase domain-like Riboflavin synthase domain-like 11
CheY-like Metallo-hydrolase/oxidoreductase 11
Acetyl-CoA synthetase-like Acetyl-CoA synthetase-like 11
Ribonuclease PH domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
Starch-binding domain-like Type I dockerin domain 11
S-adenosyl-L-methionine-dependent methyltransferases S-adenosyl-L-methionine-dependent methyltransferases 11
Thioredoxin-like alpha-helical ferredoxin 11
Band 7/SPFH domain Band 7/SPFH domain 11
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 11
Starch-binding domain-like C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase 11
TPR-like Nucleotide-diphospho-sugar transferases 11
Pectin lyase-like Hedgehog/intein (Hint) domain 11
EAL domain-like HD-domain/PDEase-like 11
PA domain Zn-dependent exopeptidases 11
Tricorn protease domain 2 Soluble quinoprotein glucose dehydrogenase 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11
L30e-like alpha/beta knot 11
PreATP-grasp domain N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) 11
PHP domain-like dsRNA-binding domain-like 11
Invasin/intimin cell-adhesion fragments RCC1/BLIP-II 11
FAD-linked oxidoreductase ALDH-like 11
CheY-like TPR-like 11
TPR-like UDP-Glycosyltransferase/glycogen phosphorylase 11
Nucleic acid-binding proteins BRCT domain 11
Thioesterase/thiol ester dehydrase-isomerase NAD(P)-binding Rossmann-fold domains 11
Putative isomerase YbhE EF-hand 11
PHP domain-like CheY-like 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
Carboxypeptidase regulatory domain-like Pectin lyase-like 11
DHS-like NAD/FAD-binding domain RmlC-like cupins 11
Type I dockerin domain YWTD domain 11
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 11
Tetrapyrrole methylase HemD-like 11
NAD(P)-binding Rossmann-fold domains Serine metabolism enzymes domain 11
Concanavalin A-like lectins/glucanases Carboxypeptidase regulatory domain-like 11
Concanavalin A-like lectins/glucanases Collagen-binding domain 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
P-loop containing nucleoside triphosphate hydrolases C-terminal UvrC-binding domain of UvrB 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
FwdE-like Molybdenum cofactor biosynthesis proteins 11
Sporulation related repeat Sporulation related repeat 11
TGS-like ACT-like 11
FabD/lysophospholipase-like ACP-like 11
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Concanavalin A-like lectins/glucanases Invasin/intimin cell-adhesion fragments 11
Isocitrate/Isopropylmalate dehydrogenase-like Actin-like ATPase domain 11
Class II aaRS and biotin synthetases GAD domain-like 11
Tetrapyrrole methylase S-adenosyl-L-methionine-dependent methyltransferases 11
Ribonuclease H-like Nucleic acid-binding proteins 11
NagB/RpiA/CoA transferase-like D-ribose-5-phosphate isomerase (RpiA), lid domain 11
TSP-1 type 1 repeat TSP-1 type 1 repeat 11
Nucleic acid-binding proteins Anticodon-binding domain of PheRS 11
FabD/lysophospholipase-like Thioesterase/thiol ester dehydrase-isomerase 11
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 11
Adenine nucleotide alpha hydrolases-like MesJ substrate recognition domain-like 11
Ligand-binding domain in the NO signalling and Golgi transport Homeodomain-like 11
CheC-like Surface presentation of antigens (SPOA) 11
E set domains (Trans)glycosidases 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
Macro domain-like Zn-dependent exopeptidases 11
Glutathione synthetase ATP-binding domain-like Phosphoenolpyruvate/pyruvate domain 11
Outer arm dynein light chain 1 P-loop containing nucleoside triphosphate hydrolases 11
Protein kinase-like (PK-like) SMAD/FHA domain 11
Fibronectin type III Caspase-like 11
Nudix "Winged helix" DNA-binding domain 11
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 11
Rubredoxin-like Superoxide reductase-like 11
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 11
PHP domain-like UDP-Glycosyltransferase/glycogen phosphorylase 11
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 11
CNF1/YfiH-like putative cysteine hydrolases HD-domain/PDEase-like 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
Class II aaRS and biotin synthetases C-terminal domain of transcriptional repressors 11
ACT-like 4Fe-4S ferredoxins 11
Hypothetical protein PA1324 Porins 11
Tropomyosin Duplicated hybrid motif 11
Thiolase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
P-loop containing nucleoside triphosphate hydrolases Tropomyosin 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
NAD(P)-binding Rossmann-fold domains ClpP/crotonase 11
ACP-like NAD(P)-binding Rossmann-fold domains 11
Carbamate kinase-like PUA domain-like 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
Rhomboid-like TPR-like 11
Chorismate mutase II Periplasmic binding protein-like II 11
Calcium ATPase, transduction domain A Metal cation-transporting ATPase, ATP-binding domain N 11
Tryptophan synthase beta subunit-like PLP-dependent enzymes Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of B transposition protein 11
PLP-dependent transferases alpha/beta-Hydrolases 11
Cna protein B-type domain Hypothetical protein PA1324 11
DHH phosphoesterases Poly A polymerase C-terminal region-like 11
FKBP-like beta and beta-prime subunits of DNA dependent RNA-polymerase 11
Caspase-like Concanavalin A-like lectins/glucanases 11
DPP6 N-terminal domain-like Type I dockerin domain 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
YjeF N-terminal domain-like Ribokinase-like 11
RBP11-like subunits of RNA polymerase C-terminal domain of RNA polymerase alpha subunit 11
3-carboxy-cis,cis-mucoante lactonizing enzyme Calcium-dependent phosphotriesterase 11
PIN domain-like Ribonuclease H-like 11
TolB, N-terminal domain Tricorn protease N-terminal domain 11
"Winged helix" DNA-binding domain 4Fe-4S ferredoxins 11
ParB/Sulfiredoxin KorB DNA-binding domain-like 11
HD-domain/PDEase-like HD-domain/PDEase-like 11
Nucleotidylyl transferase Nucleic acid-binding proteins 11
LysM domain LysM domain 11
Fibronectin type III Collagen-binding domain 11
RuvA domain 2-like BRCT domain 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Eukaryotic type KH-domain (KH-domain type I) 11
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 11
Ribonuclease H-like HRDC-like 11
Adenine nucleotide alpha hydrolases-like Adenine nucleotide alpha hydrolases-like 11
Lamin A/C globular tail domain TSP-1 type 1 repeat 11
Acylphosphatase/BLUF domain-like YrdC/RibB 11
Single hybrid motif ClpP/crotonase 11
Concanavalin A-like lectins/glucanases Quinoprotein alcohol dehydrogenase-like 11
Metallo-dependent phosphatases Type I dockerin domain 11
2Fe-2S ferredoxin-like Nucleotide-binding domain 11
Pectin lyase-like Fibronectin type III 11
Metallo-hydrolase/oxidoreductase Rhodanese/Cell cycle control phosphatase 11
PK beta-barrel domain-like PK C-terminal domain-like 11
GAF domain-like Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 11
2Fe-2S ferredoxin-like alpha-helical ferredoxin 11
Tryptophan synthase beta subunit-like PLP-dependent enzymes Nucleotidylyl transferase 11
Protein kinase-like (PK-like) GAF domain-like 11
Class II aaRS and biotin synthetases C-terminal domain of ProRS 11
Nucleic acid-binding proteins Rad51 N-terminal domain-like 11
PGBD-like L,D-transpeptidase catalytic domain-like 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Nucleic acid-binding proteins 11
Nucleic acid-binding proteins Putative DNA-binding domain 11
EAL domain-like CBS-domain pair 11
MoeA N-terminal region -like Periplasmic binding protein-like II 11
Putative DNA-binding domain Anticodon-binding domain of PheRS 11
5' to 3' exonuclease, C-terminal subdomain Ribonuclease H-like 11
PKD domain Concanavalin A-like lectins/glucanases 11
FabD/lysophospholipase-like NAD(P)-binding Rossmann-fold domains 11
Sensory domain-like PP2C-like 11
Adenine nucleotide alpha hydrolases-like PheT/TilS domain 11
Toll/Interleukin receptor TIR domain DHS-like NAD/FAD-binding domain 11
Bet v1-like NAD(P)-binding Rossmann-fold domains 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
Thiolase-like ACP-like 11
Class II aaRS ABD-related C-terminal domain of ProRS 11
Kelch motif YVTN repeat-like/Quinoprotein amine dehydrogenase 11
NAD(P)-binding Rossmann-fold domains PYP-like sensor domain (PAS domain) 11
Rudiment single hybrid motif Single hybrid motif 11
Cna protein B-type domain Porins 11
Transcription factor NusA, N-terminal domain Rad51 N-terminal domain-like 11
PheT/TilS domain Class II aaRS and biotin synthetases 11
Nucleotidyltransferase substrate binding subunit/domain ACT-like 11
HD-domain/PDEase-like TGS-like 11
Translation proteins Translation proteins 11
Nucleic acid-binding proteins GAD domain-like 11
Alpha subunit of glutamate synthase, C-terminal domain FAD/NAD(P)-binding domain 11
Ribosomal protein L6 Ribosomal protein L6 11
3-carboxy-cis,cis-mucoante lactonizing enzyme YWTD domain 11
CheY-like EspE N-terminal domain-like 11
Nucleotidyltransferase substrate binding subunit/domain HD-domain/PDEase-like 11
Adenine nucleotide alpha hydrolases-like RmlC-like cupins 11
HD-domain/PDEase-like PYP-like sensor domain (PAS domain) 11
"Winged helix" DNA-binding domain LexA/Signal peptidase 11
L domain-like Cadherin-like 11
Transcription factor NusA, N-terminal domain Prokaryotic type KH domain (KH-domain type II) 11
P-loop containing nucleoside triphosphate hydrolases Release factor 11
Pentapeptide repeat-like Voltage-gated potassium channels 11
Protein kinase-like (PK-like) Homeodomain-like 11
Starch-binding domain-like Starch-binding domain-like 11
Nucleotidylyl transferase Riboflavin kinase-like 11
PreATP-grasp domain ClpP/crotonase 11
PKD domain PKD domain 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
YWTD domain NHL repeat 11
NHL repeat Calcium-dependent phosphotriesterase 11
Nucleotide-diphospho-sugar transferases RmlC-like cupins 11
Fibronectin type III PKD domain 11
Metallo-dependent phosphatases 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain 11
NAD(P)-binding Rossmann-fold domains ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Fibronectin type III EF-hand 11
RuvA domain 2-like P-loop containing nucleoside triphosphate hydrolases 11
Translation proteins PRC-barrel domain 11
Putative DNA-binding domain Tetracyclin repressor-like, C-terminal domain 11
MetI-like MetI-like 11
Glutathione synthetase ATP-binding domain-like ClpP/crotonase 11
P-loop containing nucleoside triphosphate hydrolases TrpR-like 11
Tex N-terminal region-like RuvA domain 2-like 11
DPP6 N-terminal domain-like DPP6 N-terminal domain-like 11
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 11
Concanavalin A-like lectins/glucanases Integrin alpha N-terminal domain 11
4'-phosphopantetheinyl transferase 4'-phosphopantetheinyl transferase 11
6-phosphogluconate dehydrogenase C-terminal domain-like ClpP/crotonase 11
CheY-like Roadblock/LC7 domain 11
Concanavalin A-like lectins/glucanases Pectin lyase-like 11
Nucleotide-diphospho-sugar transferases S-adenosyl-L-methionine-dependent methyltransferases 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
Cytidine deaminase-like Dihydrofolate reductase-like 11
Concanavalin A-like lectins/glucanases Cadherin-like 11
P-loop containing nucleoside triphosphate hydrolases HSP20-like chaperones 11
2Fe-2S ferredoxin-like FAD/NAD(P)-binding domain 11
Radical SAM enzymes alpha/beta-Hydrolases 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 11
Carbohydrate-binding domain Type I dockerin domain 11
Thiolase-like SCP-like 11
Class II aaRS and biotin synthetases Translation proteins 11
Multidrug efflux transporter AcrB transmembrane domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
TK C-terminal domain-like Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 11
Rho N-terminal domain-like Nucleic acid-binding proteins 11
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 11
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 11
Invasin/intimin cell-adhesion fragments YVTN repeat-like/Quinoprotein amine dehydrogenase 11
Tex N-terminal region-like Ribonuclease H-like 11
Tex N-terminal region-like Nucleic acid-binding proteins 11
Concanavalin A-like lectins/glucanases Concanavalin A-like lectins/glucanases 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 11
WD40 repeat-like Type I dockerin domain 11
CoA-dependent acyltransferases CoA-dependent acyltransferases 11
Glucocorticoid receptor-like (DNA-binding domain) P-loop containing nucleoside triphosphate hydrolases 11
Putative DNA-binding domain NAD(P)-binding Rossmann-fold domains 11
CBS-domain pair ACT-like 11
P-loop containing nucleoside triphosphate hydrolases "Helical backbone" metal receptor 11
Cysteine proteinases Cadherin-like 11
FliG FliG 11
Metal cation-transporting ATPase, ATP-binding domain N HAD-like 11
Protein kinase-like (PK-like) Protein kinase-like (PK-like) 11
Serine metabolism enzymes domain ACT-like 11
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
CarD-like TRCF domain-like 11
Probable ACP-binding domain of malonyl-CoA ACP transacylase ACP-like 11
Nucleotidyltransferase TGS-like 11
P-loop containing nucleoside triphosphate hydrolases ARM repeat 11
Metallo-hydrolase/oxidoreductase SCP-like 11
Epsilon subunit of F1F0-ATP synthase N-terminal domain Epsilon subunit of F1F0-ATP synthase C-terminal domain 11
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 11
P-loop containing nucleoside triphosphate hydrolases CarD-like 11
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 11
RuvA domain 2-like MCP/YpsA-like 11
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 11
P-loop containing nucleoside triphosphate hydrolases Ribonuclease H-like 11
PheT/TilS domain Putative DNA-binding domain 11
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain "Winged helix" DNA-binding domain 11
Nucleic acid-binding proteins HD-domain/PDEase-like 11
FMN-dependent nitroreductase-like FMN-dependent nitroreductase-like 11
Nqo1 FMN-binding domain-like Nucleotide-binding domain 11
GreA transcript cleavage protein, N-terminal domain FKBP-like 11
CheY-like cAMP-binding domain-like 11
GIY-YIG endonuclease C-terminal UvrC-binding domain of UvrB 11
DHS-like NAD/FAD-binding domain P-loop containing nucleoside triphosphate hydrolases 11
Alpha subunit of glutamate synthase, C-terminal domain 4Fe-4S ferredoxins 11
NAD(P)-binding Rossmann-fold domains Glutamyl tRNA-reductase dimerization domain 11
Ribokinase-like Aldolase 11
Glutathione synthetase ATP-binding domain-like Single hybrid motif 11
YVTN repeat-like/Quinoprotein amine dehydrogenase Acyl-CoA N-acyltransferases (Nat) 11
Invasin/intimin cell-adhesion fragments Type I dockerin domain 11
Glutathione synthetase ATP-binding domain-like N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) 11
Nqo1C-terminal domain-like alpha-helical ferredoxin 11
Zn-dependent exopeptidases Carboxypeptidase regulatory domain-like 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 11
"Winged helix" DNA-binding domain Iron-dependent repressor protein, dimerization domain 11
Nucleic acid-binding proteins PheT/TilS domain 11
Glutamyl tRNA-reductase catalytic, N-terminal domain Glutamyl tRNA-reductase dimerization domain 11
DnaK suppressor protein DksA, alpha-hairpin domain Glucocorticoid receptor-like (DNA-binding domain) 11
Nucleotidylyl transferase Ribosomal protein L25-like 11
Bacterial fluorinating enzyme, N-terminal domain Bacterial fluorinating enzyme, C-terminal domain 11
Thioesterase/thiol ester dehydrase-isomerase SCP-like 11
Collagen-binding domain EF-hand 11
PKD domain Sialidases 11
PHP domain-like RNase III domain-like 11
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 11
FAD-binding/transporter-associated domain-like Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain 11
Sensory domain-like Methyl-accepting chemotaxis protein (MCP) signaling domain 11
Nucleotide-diphospho-sugar transferases PLP-dependent transferases 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
TGS-like Class II aaRS ABD-related 11
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 11
P-loop containing nucleoside triphosphate hydrolases PGBD-like 11
Cryptochrome/photolyase, N-terminal domain Cryptochrome/photolyase FAD-binding domain 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
TPR-like Terpenoid cyclases/Protein prenyltransferases 11
UROD/MetE-like Methionine synthase domain 11
CRISPR-associated protein CRISPR-associated protein 11
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 11
Periplasmic binding protein-like II CheW-like 11
NAD(P)-binding Rossmann-fold domains Siroheme synthase middle domains-like 11
PUA domain-like alpha/beta knot 11
CBS-domain pair Homodimeric domain of signal transducing histidine kinase 11
Histidine-containing phosphotransfer domain, HPT domain Histidine-containing phosphotransfer domain, HPT domain 11
Dihydropteroate synthetase-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
Metal cation-transporting ATPase, ATP-binding domain N Calcium ATPase, transmembrane domain M 11
HD-domain/PDEase-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Pectin lyase-like Type I dockerin domain 11
S-adenosyl-L-methionine-dependent methyltransferases TPR-like 11
Caspase-like Cadherin-like 11
Nucleotide-diphospho-sugar transferases Protein kinase-like (PK-like) 11
RCC1/BLIP-II YVTN repeat-like/Quinoprotein amine dehydrogenase 11
YWTD domain PKD domain 11
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 11
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 11
HMA, heavy metal-associated domain HAD-like 11
Alpha-L RNA-binding motif S-adenosyl-L-methionine-dependent methyltransferases 11
F1F0 ATP synthase subunit C F1F0 ATP synthase subunit C 11
P-loop containing nucleoside triphosphate hydrolases TGS-like 11
Putative DNA-binding domain Phoshotransferase/anion transport protein 11
Nucleotide cyclase Hemerythrin-like 11
SpoIIaa-like CheY-like 11
PDZ domain-like PDZ domain-like 11
PYP-like sensor domain (PAS domain) EAL domain-like 11
Putative isomerase YbhE Fibronectin type III 11
Phosphofructokinase Phosphofructokinase 11
P-loop containing nucleoside triphosphate hydrolases Acyl-CoA N-acyltransferases (Nat) 11
Pili subunits Pili subunits 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 11
Homeodomain-like Ribonuclease H-like 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
4Fe-4S ferredoxins FMN-linked oxidoreductases 11
S-adenosyl-L-methionine-dependent methyltransferases MFS general substrate transporter 11
Kelch motif RCC1/BLIP-II 11
YWTD domain Calcium-dependent phosphotriesterase 11
Lamin A/C globular tail domain Type I dockerin domain 11
GAF domain-like Phosphohistidine domain 11
Protein kinase-like (PK-like) TPR-like 11
GAF domain-like Histidine-containing phosphotransfer domain, HPT domain 11
NAD(P)-linked oxidoreductase alpha-helical ferredoxin 11
Chaperone J-domain P-loop containing nucleoside triphosphate hydrolases 11
Multiheme cytochromes Multiheme cytochromes 11
Ribonuclease H-like RuvA domain 2-like 11
Nucleotidylyl transferase Phosphoenolpyruvate/pyruvate domain 11
Glutamine synthetase/guanido kinase GatB/YqeY motif 11
HRDC-like HRDC-like 11
Regulatory protein AraC Homeodomain-like 11
Molybdenum cofactor biosynthesis proteins Periplasmic binding protein-like II 11
GroEL-intermediate domain like GroEL apical domain-like 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
FMN-linked oxidoreductases Nucleotide-binding domain 11
lambda repressor-like DNA-binding domains Periplasmic binding protein-like II 11
Nqo1C-terminal domain-like Nucleotide-binding domain 11
HD-domain/PDEase-like Homodimeric domain of signal transducing histidine kinase 11
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
Aminopeptidase/glucanase lid domain Zn-dependent exopeptidases 11
Formate/glycerate dehydrogenase catalytic domain-like ACT-like 11
ClpP/crotonase NfeD domain-like 11
Rudiment single hybrid motif N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) 11
Ligand-binding domain in the NO signalling and Golgi transport P-loop containing nucleoside triphosphate hydrolases 11
YrdC/RibB RibA-like 11
NAD(P)-binding Rossmann-fold domains 4Fe-4S ferredoxins 11
NAD(P)-binding Rossmann-fold domains Homodimeric domain of signal transducing histidine kinase 11
Integrin alpha N-terminal domain Type I dockerin domain 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 11
PEP carboxykinase N-terminal domain PEP carboxykinase-like 11
PIN domain-like DNA/RNA polymerases 11
Fibronectin type III Invasin/intimin cell-adhesion fragments 11
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 11
GroEL equatorial domain-like GroEL apical domain-like 11
Radical SAM enzymes "Winged helix" DNA-binding domain 11
2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain Alkaline phosphatase-like 11
Formate/glycerate dehydrogenase catalytic domain-like Serine metabolism enzymes domain 11
UDP-Glycosyltransferase/glycogen phosphorylase Nucleotide-diphospho-sugar transferases 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 11
Invasin/intimin cell-adhesion fragments Kelch motif 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain ACT-like 11
PYP-like sensor domain (PAS domain) Methyl-accepting chemotaxis protein (MCP) signaling domain 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Nucleic acid-binding proteins 11
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 11
YWTD domain YVTN repeat-like/Quinoprotein amine dehydrogenase 11
GAF domain-like EAL domain-like 11
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 11
DHS-like NAD/FAD-binding domain lambda repressor-like DNA-binding domains 11
Nucleic acid-binding proteins ArfGap/RecO-like zinc finger 11
Transcription factor NusA, N-terminal domain Nucleic acid-binding proteins 11
Starch-binding domain-like Carboxypeptidase regulatory domain-like 11
TGS-like Class II aaRS and biotin synthetases 11
CBS-domain pair PYP-like sensor domain (PAS domain) 11
PHP domain-like AF1531-like 11
Thioredoxin-like Nucleotide-binding domain 11
R1 subunit of ribonucleotide reductase, N-terminal domain PFL-like glycyl radical enzymes 11
Eukaryotic type KH-domain (KH-domain type I) Nucleic acid-binding proteins 11
EspE N-terminal domain-like Homodimeric domain of signal transducing histidine kinase 11
CheY-like EAL domain-like 11
Ribonuclease H-like DNA/RNA polymerases 11
Thiamin diphosphate-binding fold (THDP-binding) Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 11
Cobalamin (vitamin B12)-binding domain P-loop containing nucleoside triphosphate hydrolases 11
DPP6 N-terminal domain-like Invasin/intimin cell-adhesion fragments 11
CBS-domain pair FAD-binding/transporter-associated domain-like 11
Glutamyl tRNA-reductase catalytic, N-terminal domain NAD(P)-binding Rossmann-fold domains 11
Translation proteins ThrRS/AlaRS common domain 11
GroEL equatorial domain-like GroEL-intermediate domain like 11
Oligoxyloglucan reducing end-specific cellobiohydrolase Oligoxyloglucan reducing end-specific cellobiohydrolase 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
Heme-dependent peroxidases Heme-dependent peroxidases 11
Starch-binding domain-like Fibronectin type III 11
Type I dockerin domain PKD domain 11
Carboxypeptidase regulatory domain-like Cadherin-like 11
CbiG N-terminal domain-like CobE/GbiG C-terminal domain-like 11
Barwin-like endoglucanases Sporulation related repeat 11
Invasin/intimin cell-adhesion fragments Oligoxyloglucan reducing end-specific cellobiohydrolase 11
Fibronectin type III Hedgehog/intein (Hint) domain 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
Nucleic acid-binding proteins S-adenosyl-L-methionine-dependent methyltransferases 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
RNase III domain-like dsRNA-binding domain-like 11
PIN domain-like P-loop containing nucleoside triphosphate hydrolases 11
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 11
CBS-domain pair Poly A polymerase C-terminal region-like 11
Tetracyclin repressor-like, C-terminal domain NAD(P)-binding Rossmann-fold domains 11
Fibronectin type III Sialidases 11
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
E set domains Glycosyl hydrolase domain 11

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