SUPERFAMILY 1.75 HMM library and genome assignments server

Domain combination pairs in Xenorhabdus bovienii SS-2004

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

  • For a list of unique full length architectures for this genome click here (can be slow).
Adjacent domain pairs graph

Graph of adjacent domain pairs.


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Domain combination pairs

694 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
Homeodomain-like Ribonuclease H-like 351
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 3113
"Winged helix" DNA-binding domain Periplasmic binding protein-like II 241
CoA-dependent acyltransferases CoA-dependent acyltransferases 1816
CoA-dependent acyltransferases ACP-like 1816
Acetyl-CoA synthetase-like ACP-like 1816
CoA-dependent acyltransferases Acetyl-CoA synthetase-like 1715
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 156
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 1410
Acetyl-CoA synthetase-like Acetyl-CoA synthetase-like 1312
Actin-like ATPase domain Actin-like ATPase domain 124
ACP-like ACP-like 1211
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 115
gp5 N-terminal domain-like Phage fibre proteins 105
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 103
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 96
Phage tail proteins Phage tail proteins 94
Homeodomain-like Homeodomain-like 96
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 92
Glutathione synthetase ATP-binding domain-like PreATP-grasp domain 95
CheY-like C-terminal effector domain of the bipartite response regulators 91
Homeodomain-like Tetracyclin repressor-like, C-terminal domain 81
Phage tail proteins gp5 N-terminal domain-like 83
Thiolase-like Thiolase-like 83
Phage tail proteins Phage fibre proteins 83
GroES-like NAD(P)-binding Rossmann-fold domains 73
P-loop containing nucleoside triphosphate hydrolases Translation proteins 76
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 77
CoA-dependent acyltransferases alpha/beta-Hydrolases 76
Acetyl-CoA synthetase-like alpha/beta-Hydrolases 76
ACP-like alpha/beta-Hydrolases 76
lambda repressor-like DNA-binding domains Periplasmic binding protein-like I 61
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 63
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 65
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 65
Invasin/intimin cell-adhesion fragments Invasin/intimin cell-adhesion fragments 64
Nucleic acid-binding proteins Nucleic acid-binding proteins 53
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 55
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 53
ACT-like ACT-like 54
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 53
P-loop containing nucleoside triphosphate hydrolases MOP-like 51
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 52
PLP-binding barrel Alanine racemase C-terminal domain-like 53
Alpha-L RNA-binding motif Pseudouridine synthase 51
N-terminal domain of DnaB helicase P-loop containing nucleoside triphosphate hydrolases 51
JAB1/MPN domain Cysteine proteinases 51
CBS-domain pair FAD-binding/transporter-associated domain-like 41
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 42
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 42
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 42
Nucleic acid-binding proteins RuvA domain 2-like 44
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 42
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein S5 domain 2-like 44
ACP-like NAD(P)-binding Rossmann-fold domains 44
6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 42
NAD(P)-binding Rossmann-fold domains UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 41
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 43
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 43
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB transmembrane domain 42
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 42
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 44
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Histidine-containing phosphotransfer domain, HPT domain 44
PapD-like Periplasmic chaperone C-domain 41
Class II aaRS and biotin synthetases Class II aaRS ABD-related 43
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 42
Homodimeric domain of signal transducing histidine kinase Histidine-containing phosphotransfer domain, HPT domain 44
Thioredoxin-like GST C-terminal domain-like 41
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 42
"Winged helix" DNA-binding domain GntR ligand-binding domain-like 41
PreATP-grasp domain Rudiment single hybrid motif 42
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 44
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 44
Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase C-terminal domain-like 43
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB transmembrane domain 42
6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 41
MurCD N-terminal domain MurD-like peptide ligases, peptide-binding domain 31
Nucleotidyltransferase HD-domain/PDEase-like 32
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 32
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 33
Translation proteins EF-G C-terminal domain-like 33
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 33
Homodimeric domain of signal transducing histidine kinase CheY-like 33
Nucleic acid-binding proteins Translation proteins SH3-like domain 32
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 32
NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains 33
PurM N-terminal domain-like PurM C-terminal domain-like 32
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 33
HAD-like Calcium ATPase, transmembrane domain M 33
HD-domain/PDEase-like ACT-like 32
Nucleotidyltransferase Poly A polymerase C-terminal region-like 33
Prokaryotic type I DNA topoisomerase Zinc beta-ribbon 32
"Winged helix" DNA-binding domain Dimeric alpha+beta barrel 31
MurCD N-terminal domain MurD-like peptide ligases, catalytic domain 31
Calcium ATPase, transduction domain A HAD-like 33
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 33
Nucleotidyltransferase ACT-like 32
Thiolase-like NAD(P)-binding Rossmann-fold domains 33
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 31
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 32
EF-G C-terminal domain-like EF-G C-terminal domain-like 33
Lysozyme-like beta-lactamase/transpeptidase-like 33
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 33
lambda repressor-like DNA-binding domains LexA/Signal peptidase 31
Pectin lyase-like Autotransporter 33
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 32
Phospholipase D/nuclease Phospholipase D/nuclease 33
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 32
Sm-like ribonucleoproteins Mechanosensitive channel protein MscS (YggB), C-terminal domain 32
Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), C-terminal domain 32
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 33
Thiolase-like ACP-like 33
FKBP-like Triger factor/SurA peptide-binding domain-like 33
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheY-like 33
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 32
HlyD-like secretion proteins HlyD-like secretion proteins 31
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 32
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 32
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphohistidine domain 22
Succinyl-CoA synthetase domains Glutathione synthetase ATP-binding domain-like 22
Aspartate receptor, ligand-binding domain Methyl-accepting chemotaxis protein (MCP) signaling domain 21
CheY-like Histidine-containing phosphotransfer domain, HPT domain 22
SGNH hydrolase Autotransporter 21
DNA methylase specificity domain DNA methylase specificity domain 21
RmlC-like cupins Homeodomain-like 21
FabD/lysophospholipase-like NAD(P)-binding Rossmann-fold domains 22
Enolase N-terminal domain-like Enolase C-terminal domain-like 21
(Trans)glycosidases E set domains 22
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 21
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 22
Isochorismatase-like hydrolases ACP-like 21
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 21
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 21
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 22
Carbamate kinase-like ACT-like 22
Class I glutamine amidotransferase-like Homeodomain-like 21
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 22
TGS-like ACT-like 21
Trypsin-like serine proteases PDZ domain-like 22
cAMP-binding domain-like "Winged helix" DNA-binding domain 21
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 22
TrkA C-terminal domain-like TrkA C-terminal domain-like 22
"Winged helix" DNA-binding domain Chorismate lyase-like 21
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 22
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 22
Actin-like ATPase domain HD-domain/PDEase-like 21
PK beta-barrel domain-like PK C-terminal domain-like 21
Single hybrid motif CoA-dependent acyltransferases 22
P-loop containing nucleoside triphosphate hydrolases Restriction endonuclease-like 22
L30e-like alpha/beta knot 22
Single hybrid motif Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 22
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 21
Nucleotidyltransferase TGS-like 21
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 22
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
Metallo-dependent phosphatases 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain 22
Zinc beta-ribbon Zinc beta-ribbon 22
"Winged helix" DNA-binding domain Actin-like ATPase domain 22
GreA transcript cleavage protein, N-terminal domain FKBP-like 21
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 22
Glucocorticoid receptor-like (DNA-binding domain) P-loop containing nucleoside triphosphate hydrolases 22
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 22
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 21
Nucleotidyltransferase Nucleotidyltransferase substrate binding subunit/domain 22
Penicillin binding protein dimerisation domain beta-lactamase/transpeptidase-like 21
lambda integrase-like, N-terminal domain DNA breaking-rejoining enzymes 21
PDZ domain-like PDZ domain-like 22
Folate-binding domain Aminomethyltransferase beta-barrel domain 21
"Winged helix" DNA-binding domain Rhodanese/Cell cycle control phosphatase 22
Translation proteins ThrRS/AlaRS common domain 22
Ribonuclease H-like DNA/RNA polymerases 22
2Fe-2S ferredoxin-like Riboflavin synthase domain-like 22
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 22
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphoenolpyruvate/pyruvate domain 22
Pentapeptide repeat-like Pentapeptide repeat-like 22
ClpP/crotonase NAD(P)-binding Rossmann-fold domains 21
DNA ligase/mRNA capping enzyme, catalytic domain RuvA domain 2-like 22
EF-G C-terminal domain-like Ribosomal protein S5 domain 2-like 22
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 21
2Fe-2S ferredoxin-like Ferredoxin reductase-like, C-terminal NADP-linked domain 22
ClpP/crotonase 6-phosphogluconate dehydrogenase C-terminal domain-like 21
NAD(P)-binding Rossmann-fold domains ACT-like 22
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 22
Thiolase-like FabD/lysophospholipase-like 22
Aspartate/glutamate racemase Aspartate/glutamate racemase 21
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 21
Subtilisin-like Autotransporter 22
Formate dehydrogenase/DMSO reductase, domains 1-3 ADC-like 22
MetI-like MetI-like 22
HD-domain/PDEase-like TGS-like 21
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 21
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 22
(Trans)glycosidases Glycosyl hydrolase domain 22
HMA, heavy metal-associated domain HAD-like 22
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 21
Formyltransferase FMT C-terminal domain-like 22
CheY-like Homeodomain-like 21
Aconitase iron-sulfur domain LeuD/IlvD-like 22
ThrRS/AlaRS common domain Class II aaRS and biotin synthetases 22
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 22
beta-lactamase/transpeptidase-like Penicillin-binding protein associated domain 21
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 21
Carbamate kinase-like NAD(P)-binding Rossmann-fold domains 22
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 21
2Fe-2S ferredoxin-like alpha-helical ferredoxin 21
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 21
tRNA-binding arm Class II aaRS and biotin synthetases 21
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 21
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 21
(Trans)glycosidases Chitinase insertion domain 22
FabD/lysophospholipase-like ACP-like 22
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 22
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 21
Composite domain of metallo-dependent hydrolases Metallo-dependent hydrolases 21
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 21
Carbamate kinase-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 22
GAF domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 22
alpha/beta-Hydrolases alpha/beta-Hydrolases 22
CheY-like P-loop containing nucleoside triphosphate hydrolases 21
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex CoA-dependent acyltransferases 22
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 11
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 11
Class II aaRS and biotin synthetases SufE/NifU 11
NAD(P)-binding Rossmann-fold domains Siroheme synthase middle domains-like 11
FAD-binding/transporter-associated domain-like alpha-helical ferredoxin 11
FMT C-terminal domain-like NAD(P)-binding Rossmann-fold domains 11
Aminoacid dehydrogenase-like, N-terminal domain Isocitrate/Isopropylmalate dehydrogenase-like 11
Fe-S cluster assembly (FSCA) domain-like P-loop containing nucleoside triphosphate hydrolases 11
L9 N-domain-like Ribosomal protein L9 C-domain 11
NTF2-like Sec-C motif 11
FKBP-like FKBP-like 11
Ribokinase-like Nucleotidylyl transferase 11
Cytidine deaminase-like Cytidine deaminase-like 11
RNase III domain-like dsRNA-binding domain-like 11
Adenine nucleotide alpha hydrolases-like PheT/TilS domain 11
RuvA domain 2-like DNA helicase RuvA subunit, C-terminal domain 11
PH0987 N-terminal domain-like Cyclophilin-like 11
FAD-linked oxidoreductase ALDH-like 11
P-loop containing nucleoside triphosphate hydrolases TGS-like 11
Carbon-nitrogen hydrolase Adenine nucleotide alpha hydrolases-like 11
Nqo1 FMN-binding domain-like alpha-helical ferredoxin 11
Rho N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
DNA clamp DNA clamp 11
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 11
FMN-binding split barrel UbiD C-terminal domain-like 11
Elongation factor Ts (EF-Ts), dimerisation domain Elongation factor Ts (EF-Ts), dimerisation domain 11
Lysozyme-like LysM domain 11
alpha/beta-Hydrolases S-adenosyl-L-methionine-dependent methyltransferases 11
Putative DNA-binding domain Anticodon-binding domain of PheRS 11
Ribonuclease PH domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
FMN-linked oxidoreductases FAD/NAD(P)-binding domain 11
Epsilon subunit of F1F0-ATP synthase N-terminal domain Epsilon subunit of F1F0-ATP synthase C-terminal domain 11
FAD/NAD(P)-binding domain HI0933 insert domain-like 11
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 11
Resolvase-like Homeodomain-like 11
LysM domain Invasin/intimin cell-adhesion fragments 11
DNA-glycosylase Nudix 11
Poly A polymerase C-terminal region-like ACT-like 11
Thiolase-like GroES-like 11
Chorismate mutase II NAD(P)-binding Rossmann-fold domains 11
ClpP/crotonase ClpP/crotonase 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase HSP90 C-terminal domain 11
PurS-like Class I glutamine amidotransferase-like 11
Putative DNA-binding domain Translation proteins 11
Periplasmic binding protein-like II GlnB-like 11
Nqo1 FMN-binding domain-like Nqo1C-terminal domain-like 11
TolB, N-terminal domain Tricorn protease N-terminal domain 11
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 11
Fibronectin type III Fibronectin type III 11
Carbohydrate-binding domain (Trans)glycosidases 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 11
S-adenosyl-L-methionine-dependent methyltransferases S-adenosyl-L-methionine-dependent methyltransferases 11
R1 subunit of ribonucleotide reductase, N-terminal domain PFL-like glycyl radical enzymes 11
Single hybrid motif Single hybrid motif 11
Acetyl-CoA synthetase-like NAD(P)-binding Rossmann-fold domains 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 11
Rho N-terminal domain-like Nucleic acid-binding proteins 11
FGAM synthase PurL, linker domain PurM N-terminal domain-like 11
Periplasmic binding protein-like II ACT-like 11
"Winged helix" DNA-binding domain LexA/Signal peptidase 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
OMPA-like OmpA-like 11
NagB/RpiA/CoA transferase-like D-ribose-5-phosphate isomerase (RpiA), lid domain 11
Ribosomal protein S5 domain 2-like HSP90 C-terminal domain 11
5' to 3' exonuclease, C-terminal subdomain DNA/RNA polymerases 11
TGS-like Class II aaRS ABD-related 11
Class II aaRS and biotin synthetases C-terminal domain of transcriptional repressors 11
GroEL equatorial domain-like GroEL-intermediate domain like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Adenine nucleotide alpha hydrolases-like 11
FMN-linked oxidoreductases Alpha subunit of glutamate synthase, C-terminal domain 11
YajQ-like YajQ-like 11
PPK N-terminal domain-like PHP14-like 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleic acid-binding proteins 11
2Fe-2S ferredoxin-like Formate dehydrogenase/DMSO reductase, domains 1-3 11
Nucleotidyltransferase substrate binding subunit/domain Nucleotidyltransferase substrate binding subunit/domain 11
Nitrite/Sulfite reductase N-terminal domain-like Nitrite/Sulfite reductase N-terminal domain-like 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
Homeodomain-like SIS domain 11
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 11
HCP-like HCP-like 11
PrpR receptor domain-like Homeodomain-like 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
Nucleotidylyl transferase tRNA-binding arm 11
Heme oxygenase-like RmlC-like cupins 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Nucleic acid-binding proteins 11
Chemotaxis receptor methyltransferase CheR, N-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 11
PUA domain-like alpha/beta knot 11
FliG FliG 11
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 11
Chorismate mutase II 6-phosphogluconate dehydrogenase C-terminal domain-like 11
PUA domain-like Ribosomal protein S5 domain 2-like 11
Formyltransferase NAD(P)-binding Rossmann-fold domains 11
PLP-dependent transferases Ornithine decarboxylase C-terminal domain 11
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 11
Tryptophan synthase beta subunit-like PLP-dependent enzymes ACT-like 11
Trigger factor ribosome-binding domain FKBP-like 11
Glutamyl tRNA-reductase catalytic, N-terminal domain NAD(P)-binding Rossmann-fold domains 11
CheY-binding domain of CheA ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
GroEL-intermediate domain like GroEL apical domain-like 11
PurM C-terminal domain-like Class I glutamine amidotransferase-like 11
HesB-like domain Fe-S cluster assembly (FSCA) domain-like 11
"Winged helix" DNA-binding domain S-adenosyl-L-methionine-dependent methyltransferases 11
Nqo5-like HydB/Nqo4-like 11
ALDH-like Thioesterase/thiol ester dehydrase-isomerase 11
Band 7/SPFH domain Band 7/SPFH domain 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
Subtilisin-like Pectin lyase-like 11
lambda repressor-like DNA-binding domains RmlC-like cupins 11
Zinc beta-ribbon DNA primase core 11
Tex N-terminal region-like RuvA domain 2-like 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
PYP-like sensor domain (PAS domain) CheY-like 11
Regulatory protein AraC Homeodomain-like 11
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 11
Adenine nucleotide alpha hydrolases-like MesJ substrate recognition domain-like 11
beta-lactamase/transpeptidase-like ABC transporter transmembrane region 11
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 11
Nucleic acid-binding proteins DNA helicase RuvA subunit, C-terminal domain 11
Nucleotidyltransferase substrate binding subunit/domain ACT-like 11
Carbohydrate-binding domain E set domains 11
MalF N-terminal region-like MetI-like 11
MoeA N-terminal region -like Molybdenum cofactor biosynthesis proteins 11
Pectin lyase-like Pectin lyase-like 11
Poly A polymerase C-terminal region-like HD-domain/PDEase-like 11
Ribbon-helix-helix N-terminal domain of bifunctional PutA protein 11
Prokaryotic type KH domain (KH-domain type II) Rad51 N-terminal domain-like 11
GAF domain-like Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 11
N-terminal domain of bifunctional PutA protein FAD-linked oxidoreductase 11
Diaminopimelate epimerase-like Diaminopimelate epimerase-like 11
E set domains Glycosyl hydrolase domain 11
PreATP-grasp domain Single hybrid motif 11
CbiG N-terminal domain-like CobE/GbiG C-terminal domain-like 11
"Winged helix" DNA-binding domain NagB/RpiA/CoA transferase-like 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
Tex N-terminal region-like Nucleic acid-binding proteins 11
P-loop containing nucleoside triphosphate hydrolases HprK N-terminal domain-like 11
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Eukaryotic type KH-domain (KH-domain type I) 11
Nucleotide-binding domain FAD/NAD(P)-binding domain 11
MgtE N-terminal domain-like CBS-domain pair 11
alpha/beta-Hydrolases beta-Roll 11
Aspartate carbamoyltransferase, Regulatory-chain, N-terminal domain Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FMN-linked oxidoreductases 11
Adenine nucleotide alpha hydrolases-like GAF domain-like 11
Thiamin diphosphate-binding fold (THDP-binding) Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 11
S13-like H2TH domain Glucocorticoid receptor-like (DNA-binding domain) 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 11
Chorismate mutase II Periplasmic binding protein-like II 11
Siroheme synthase middle domains-like Tetrapyrrole methylase 11
Glutamyl tRNA-reductase catalytic, N-terminal domain Glutamyl tRNA-reductase dimerization domain 11
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 11
Transcription factor NusA, N-terminal domain Rad51 N-terminal domain-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 11
Phage tail proteins Lysozyme-like 11
Thiolase-like CoA-dependent acyltransferases 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 11
MoeA N-terminal region -like MoeA C-terminal domain-like 11
Glutathione synthetase ATP-binding domain-like Acyl-CoA N-acyltransferases (Nat) 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
P-loop containing nucleoside triphosphate hydrolases CBS-domain pair 11
TPR-like TPR-like 11
DnaK suppressor protein DksA, alpha-hairpin domain Glucocorticoid receptor-like (DNA-binding domain) 11
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
Glutathione synthetase ATP-binding domain-like Phosphoenolpyruvate/pyruvate domain 11
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 11
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 11
WD40 repeat-like Quinoprotein alcohol dehydrogenase-like 11
Carbamate kinase-like Acyl-CoA N-acyltransferases (Nat) 11
PheT/TilS domain Putative DNA-binding domain 11
Metal cation-transporting ATPase, ATP-binding domain N Calcium ATPase, transmembrane domain M 11
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 11
Bacterial muramidases Lysozyme-like 11
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 11
NAD(P)-binding Rossmann-fold domains TrkA C-terminal domain-like 11
THUMP domain-like Adenine nucleotide alpha hydrolases-like 11
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 11
PMT central region-like alpha/beta-Hydrolases 11
Nucleotidyltransferase Nucleotidyltransferase 11
Methylated DNA-protein cysteine methyltransferase domain Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheW-like 11
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 11
Thioesterase/thiol ester dehydrase-isomerase Thioesterase/thiol ester dehydrase-isomerase 11
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
Class II aaRS and biotin synthetases YbaK/ProRS associated domain 11
Chorismate mutase II ACT-like 11
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
lambda repressor-like DNA-binding domains P-loop containing nucleoside triphosphate hydrolases 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
Nudix Nudix 11
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 11
HisI-like all-alpha NTP pyrophosphatases 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Alpha subunit of glutamate synthase, C-terminal domain 11
PGBD-like L,D-transpeptidase catalytic domain-like 11
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Pyrimidine nucleoside phosphorylase C-terminal domain 11
NAD(P)-binding Rossmann-fold domains Isocitrate/Isopropylmalate dehydrogenase-like 11
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 11
Nucleic acid-binding proteins Rad51 N-terminal domain-like 11
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 11
CheY-like Methylesterase CheB, C-terminal domain 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
RuvA domain 2-like BRCT domain 11
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 11
TGS-like ThrRS/AlaRS common domain 11
lambda repressor-like DNA-binding domains Nucleotidylyl transferase 11
Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha) Thioredoxin-like 11
PHP domain-like Nucleic acid-binding proteins 11
Hsp33 domain HSP33 redox switch-like 11
PIN domain-like Ribonuclease H-like 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 11
Adenine nucleotide alpha hydrolases-like Rhodanese/Cell cycle control phosphatase 11
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 11
PIN domain-like DNA/RNA polymerases 11
Adenine nucleotide alpha hydrolases-like Adenine nucleotide alpha hydrolases-like 11
P-loop containing nucleoside triphosphate hydrolases Zn-binding ribosomal proteins 11
Pseudouridine synthase PUA domain-like 11
Carbamate kinase-like PUA domain-like 11
Aconitase B, N-terminal domain Aconitase iron-sulfur domain 11
P-loop containing nucleoside triphosphate hydrolases TPR-like 11
Thiolase-like Thioesterase/thiol ester dehydrase-isomerase 11
E set domains alpha/beta-Hydrolases 11
GIY-YIG endonuclease C-terminal UvrC-binding domain of UvrB 11
Succinyl-CoA synthetase domains Acyl-CoA N-acyltransferases (Nat) 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
MgtE N-terminal domain-like MgtE membrane domain-like 11
HAMP domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
"Winged helix" DNA-binding domain C-terminal domain of arginine repressor 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
ACT-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 11
Ribosomal protein L6 Ribosomal protein L6 11
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 11
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 11
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
Homeodomain-like Probable bacterial effector-binding domain 11
NAD(P)-binding Rossmann-fold domains Tetrapyrrole methylase 11
Riboflavin synthase domain-like Riboflavin synthase domain-like 11
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 11
LysM domain LysM domain 11
P-loop containing nucleoside triphosphate hydrolases C-terminal UvrC-binding domain of UvrB 11
GAF domain-like Homodimeric domain of signal transducing histidine kinase 11
ALDH-like Acetyl-CoA synthetase-like 11
PDZ domain-like ClpP/crotonase 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
Ribulose-phoshate binding barrel Ribulose-phoshate binding barrel 11
CheC-like Surface presentation of antigens (SPOA) 11
Leukotriene A4 hydrolase N-terminal domain Metalloproteases ("zincins"), catalytic domain 11
Nucleotidyltransferase substrate binding subunit/domain Poly A polymerase C-terminal region-like 11
Cyclophilin-like Cyclophilin-like 11
His-Me finger endonucleases Ada DNA repair protein, N-terminal domain (N-Ada 10) 11
PheT/TilS domain Anticodon-binding domain of PheRS 11
DsbC/DsbG N-terminal domain-like Thioredoxin-like 11
"Winged helix" DNA-binding domain Ribokinase-like 11
PYP-like sensor domain (PAS domain) P-loop containing nucleoside triphosphate hydrolases 11
HAMP domain-like Homodimeric domain of signal transducing histidine kinase 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
Ribbon-helix-helix ALDH-like 11
C-terminal UvrC-binding domain of UvrB RuvA domain 2-like 11
NAD(P)-binding Rossmann-fold domains CoA-dependent acyltransferases 11
Metalloproteases ("zincins"), catalytic domain beta-Roll 11
ACT-like Formyltransferase 11
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 11
NAD(P)-binding Rossmann-fold domains Glutamyl tRNA-reductase dimerization domain 11
Bet v1-like Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 11
CheY-like CheY-like 11
Chaperone J-domain HSP40/DnaJ peptide-binding domain 11
RuvA domain 2-like RuvA domain 2-like 11
GroES-like GroES-like 11
FAD-binding/transporter-associated domain-like Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain 11
Adenine nucleotide alpha hydrolases-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Probable ACP-binding domain of malonyl-CoA ACP transacylase NAD(P)-binding Rossmann-fold domains 11
Nucleic acid-binding proteins BRCT domain 11
Periplasmic binding protein-like II Lysozyme-like 11
RBP11-like subunits of RNA polymerase C-terminal domain of RNA polymerase alpha subunit 11
HRDC-like HRDC-like 11
P-loop containing nucleoside triphosphate hydrolases Isocitrate/Isopropylmalate dehydrogenase-like 11
Glucose permease domain IIB Duplicated hybrid motif 11
FAD-linked oxidases, C-terminal domain alpha-helical ferredoxin 11
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 11
alpha-helical ferredoxin Nucleotide-binding domain 11
"Winged helix" DNA-binding domain PLP-dependent transferases 11
PurM N-terminal domain-like Class I glutamine amidotransferase-like 11
gp5 N-terminal domain-like Lysozyme-like 11
HAD-like Ribosomal protein S5 domain 2-like 11
Phage fibre proteins Lysozyme-like 11
Flavoproteins Riboflavin synthase domain-like 11
TGS-like Class II aaRS and biotin synthetases 11
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 11
YbaK/ProRS associated domain Class II aaRS ABD-related 11
Nucleotidylyl transferase Nucleic acid-binding proteins 11
Translation proteins Translation proteins 11
Acyl-CoA N-acyltransferases (Nat) Thioesterase/thiol ester dehydrase-isomerase 11
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 11
Tryptophan synthase beta subunit-like PLP-dependent enzymes CBS-domain pair 11
Chaperone J-domain HSC20 (HSCB), C-terminal oligomerisation domain 11
PurS-like PurM N-terminal domain-like 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Nucleic acid-binding proteins 11
N-acetylmuramoyl-L-alanine amidase-like PGBD-like 11
4Fe-4S ferredoxins Formate dehydrogenase/DMSO reductase, domains 1-3 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
Prokaryotic type KH domain (KH-domain type II) Prokaryotic type KH domain (KH-domain type II) 11
Inosine monophosphate dehydrogenase (IMPDH) PLP-dependent transferases 11
THUMP domain-like Rhodanese/Cell cycle control phosphatase 11
MOSC N-terminal domain-like 2Fe-2S ferredoxin-like 11
PK beta-barrel domain-like 2Fe-2S ferredoxin-like 11
P-loop containing nucleoside triphosphate hydrolases C-terminal effector domain of the bipartite response regulators 11
FMN-linked oxidoreductases Nucleotide-binding domain 11
DNA primase core DNA primase DnaG, C-terminal domain 11
Nucleic acid-binding proteins Anticodon-binding domain of PheRS 11
PurS-like FGAM synthase PurL, linker domain 11
PheT/TilS domain Class II aaRS and biotin synthetases 11
PreATP-grasp domain Methylglyoxal synthase-like 11
beta-lactamase/transpeptidase-like P-loop containing nucleoside triphosphate hydrolases 11
"Winged helix" DNA-binding domain GAF domain-like 11
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 11
PYP-like sensor domain (PAS domain) Histidine-containing phosphotransfer domain, HPT domain 11
MesJ substrate recognition domain-like PheT/TilS domain 11
Rudiment single hybrid motif Single hybrid motif 11
GAF domain-like Phosphohistidine domain 11
PTS system fructose IIA component-like PTS IIb component 11
"Winged helix" DNA-binding domain C-terminal domain of transcriptional repressors 11
P-loop containing nucleoside triphosphate hydrolases HRDC-like 11
5' to 3' exonuclease, C-terminal subdomain Ribonuclease H-like 11
NTF2-like C-terminal effector domain of the bipartite response regulators 11
Translation proteins PRC-barrel domain 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
GIY-YIG endonuclease RuvA domain 2-like 11
CBS-domain pair MgtE membrane domain-like 11
CarD-like TRCF domain-like 11
Rad51 N-terminal domain-like Rad51 N-terminal domain-like 11
Flavoproteins Ferredoxin reductase-like, C-terminal NADP-linked domain 11
Transcription factor NusA, N-terminal domain Nucleic acid-binding proteins 11
HprK N-terminal domain-like Isocitrate/Isopropylmalate dehydrogenase-like 11
Nucleotidyltransferase substrate binding subunit/domain HD-domain/PDEase-like 11
Ribbon-helix-helix FAD-linked oxidoreductase 11
Zinc beta-ribbon P-loop containing nucleoside triphosphate hydrolases 11
Metal cation-transporting ATPase, ATP-binding domain N HAD-like 11
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 11
GroEL equatorial domain-like GroEL apical domain-like 11
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
"Winged helix" DNA-binding domain Class II aaRS and biotin synthetases 11
Adenine nucleotide alpha hydrolases-like Homodimeric domain of signal transducing histidine kinase 11
Thiolase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 11
N-terminal domain of bifunctional PutA protein ALDH-like 11
Class I glutamine amidotransferase-like LD-carboxypeptidase A C-terminal domain-like 11
CRISPR-associated protein CRISPR-associated protein 11
PMT central region-like beta-Roll 11
NTF2-like NTF2-like 11
Formate/glycerate dehydrogenase catalytic domain-like ACT-like 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
FGAM synthase PurL, linker domain PurM C-terminal domain-like 11
Nucleic acid-binding proteins GAD domain-like 11
Nqo1 FMN-binding domain-like Nqo1 middle domain-like 11
Probable ACP-binding domain of malonyl-CoA ACP transacylase ACP-like 11
Nucleotidylyl transferase Riboflavin kinase-like 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
H-NS histone-like proteins H-NS histone-like proteins 11
P-loop containing nucleoside triphosphate hydrolases CarD-like 11
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 11
PEP carboxykinase N-terminal domain PEP carboxykinase-like 11
Enolase C-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
P-loop containing nucleoside triphosphate hydrolases ACT-like 11
CheY-binding domain of CheA CheW-like 11
Ribonuclease H-like Nucleic acid-binding proteins 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11
Histidine-containing phosphotransfer domain, HPT domain CheW-like 11
Calcium ATPase, transduction domain A Metal cation-transporting ATPase, ATP-binding domain N 11
"Winged helix" DNA-binding domain MukF C-terminal domain-like 11
"Winged helix" DNA-binding domain MOP-like 11
PHP14-like Phospholipase D/nuclease 11
Translation proteins Ribosomal protein S5 domain 2-like 11
MOSC N-terminal domain-like PK beta-barrel domain-like 11
Homodimeric domain of signal transducing histidine kinase CheW-like 11
beta-N-acetylhexosaminidase-like domain (Trans)glycosidases 11
Histidine-containing phosphotransfer domain, HPT domain CheY-binding domain of CheA 11
Ribosomal protein S5 domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
GAF domain-like Homeodomain-like 11
Translation proteins Initiation factor IF2/eIF5b, domain 3 11
Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Pyrimidine nucleoside phosphorylase C-terminal domain 11
Eukaryotic type KH-domain (KH-domain type I) Nucleic acid-binding proteins 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
2Fe-2S ferredoxin-like ADC-like 11
Nucleic acid-binding proteins PheT/TilS domain 11
NAD(P)-binding Rossmann-fold domains Acyl-CoA N-acyltransferases (Nat) 11
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 11
4Fe-4S ferredoxins ADC-like 11
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 11
HMA, heavy metal-associated domain HMA, heavy metal-associated domain 11
E set domains E set domains 11
Carbohydrate-binding domain beta-N-acetylhexosaminidase-like domain 11
Nucleic acid-binding proteins S-adenosyl-L-methionine-dependent methyltransferases 11
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 11
P-loop containing nucleoside triphosphate hydrolases Hypothetical protein YjiA, C-terminal domain 11
Nitrite and sulphite reductase 4Fe-4S domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleotidylyl transferase 11
ALDH-like Dehydroquinate synthase-like 11
GAF domain-like Phosphoenolpyruvate/pyruvate domain 11
PreATP-grasp domain PreATP-grasp domain 11
Glutathione synthetase ATP-binding domain-like Single hybrid motif 11
PurS-like PurM C-terminal domain-like 11
GroES-like ACP-like 11
Peptidase/esterase 'gauge' domain alpha/beta-Hydrolases 11
P-loop containing nucleoside triphosphate hydrolases TrpR-like 11
N-terminal domain of MutM-like DNA repair proteins Glucocorticoid receptor-like (DNA-binding domain) 11
Methylglyoxal synthase-like Cytidine deaminase-like 11
Nucleic acid-binding proteins Putative DNA-binding domain 11
PLP-dependent transferases PLP-dependent transferases 11
TPR-like C-terminal effector domain of the bipartite response regulators 11
Nucleotidylyl transferase P-loop containing nucleoside triphosphate hydrolases 11
Putative DNA-binding domain Initiation factor IF2/eIF5b, domain 3 11
PYP-like sensor domain (PAS domain) Homeodomain-like 11
UROD/MetE-like UROD/MetE-like 11
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 11
Macro domain-like Zn-dependent exopeptidases 11
Molybdenum cofactor biosynthesis proteins MoeA C-terminal domain-like 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
Tex N-terminal region-like Ribonuclease H-like 11
NAD(P)-binding Rossmann-fold domains Glutathione synthetase ATP-binding domain-like 11
YdgH-like YdgH-like 11
beta-N-acetylhexosaminidase-like domain E set domains 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
Rhodanese/Cell cycle control phosphatase Rhodanese/Cell cycle control phosphatase 11
Nucleic acid-binding proteins Prokaryotic type KH domain (KH-domain type II) 11
FGAM synthase PurL, linker domain Class I glutamine amidotransferase-like 11
Ribbon-helix-helix Replication modulator SeqA, C-terminal DNA-binding domain 11
Succinyl-CoA synthetase domains Succinyl-CoA synthetase domains 11
Class II aaRS and biotin synthetases GAD domain-like 11
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
Globin-like Riboflavin synthase domain-like 11
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 11
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 11
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 11
Cupredoxins Cupredoxins 11
Putative DNA-binding domain P-loop containing nucleoside triphosphate hydrolases 11
Zinc beta-ribbon "Winged helix" DNA-binding domain 11
Globin-like Ferredoxin reductase-like, C-terminal NADP-linked domain 11
PPK N-terminal domain-like Phospholipase D/nuclease 11
Class II aaRS and biotin synthetases Translation proteins 11
all-alpha NTP pyrophosphatases all-alpha NTP pyrophosphatases 11
Nucleic acid-binding proteins ArfGap/RecO-like zinc finger 11
Ribonuclease H-like RuvA domain 2-like 11
Nucleotidylyl transferase Ribosomal protein L25-like 11
Thioredoxin-like TPR-like 11
Nqo1 middle domain-like Nqo1C-terminal domain-like 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
YhbC-like, N-terminal domain YhbC-like, C-terminal domain 11
Cytidine deaminase-like Dihydrofolate reductase-like 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
Zinc beta-ribbon DNA primase DnaG, C-terminal domain 11
MFS general substrate transporter MFS general substrate transporter 11
Ribonuclease H-like HRDC-like 11
Aconitase B, N-terminal domain LeuD/IlvD-like 11
2Fe-2S ferredoxin-like 4Fe-4S ferredoxins 11
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 11
PrpR receptor domain-like P-loop containing nucleoside triphosphate hydrolases 11
Transcription factor NusA, N-terminal domain Prokaryotic type KH domain (KH-domain type II) 11
P-loop containing nucleoside triphosphate hydrolases Acyl-CoA N-acyltransferases (Nat) 11
Homo-oligomeric flavin-containing Cys decarboxylases, HFCD CoaB-like 11
TrmE connector domain P-loop containing nucleoside triphosphate hydrolases 11
CheY-binding domain of CheA Homodimeric domain of signal transducing histidine kinase 11
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 11
DeoB insert domain-like Alkaline phosphatase-like 11
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 11
Cytochrome c oxidase subunit II-like, transmembrane region Cupredoxins 11
FabD/lysophospholipase-like GroES-like 11

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