SUPERFAMILY 1.75 HMM library and genome assignments server

Domain combination pairs in Burkholderia multivorans ATCC 17616

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

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Adjacent domain pairs graph

Graph of adjacent domain pairs.


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Domain combination pairs

800 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
"Winged helix" DNA-binding domain Periplasmic binding protein-like II 1522
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 4620
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 4016
Homeodomain-like Homeodomain-like 358
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 337
CheY-like C-terminal effector domain of the bipartite response regulators 302
GroES-like NAD(P)-binding Rossmann-fold domains 293
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 244
Homeodomain-like Tetracyclin repressor-like, C-terminal domain 242
Actin-like ATPase domain Actin-like ATPase domain 225
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 223
"Winged helix" DNA-binding domain GAF domain-like 212
"Winged helix" DNA-binding domain PLP-dependent transferases 201
"Winged helix" DNA-binding domain GntR ligand-binding domain-like 191
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 198
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 188
"Winged helix" DNA-binding domain Dimeric alpha+beta barrel 181
Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase C-terminal domain-like 183
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 1812
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 175
Cytochrome c Cytochrome c 177
P-loop containing nucleoside triphosphate hydrolases MOP-like 171
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheY-like 1612
Thioredoxin-like GST C-terminal domain-like 161
Composite domain of metallo-dependent hydrolases Metallo-dependent hydrolases 166
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 164
Homodimeric domain of signal transducing histidine kinase CheY-like 1410
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 146
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 1410
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 136
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 131
Class I glutamine amidotransferase-like Homeodomain-like 132
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB transmembrane domain 125
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB transmembrane domain 125
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 125
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 125
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 115
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 111
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 111
2Fe-2S ferredoxin-like CO dehydrogenase ISP C-domain like 113
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 114
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 103
ISP domain Bet v1-like 102
Formate dehydrogenase/DMSO reductase, domains 1-3 ADC-like 105
Thiolase-like Thiolase-like 102
lambda repressor-like DNA-binding domains Periplasmic binding protein-like I 91
Enolase N-terminal domain-like Enolase C-terminal domain-like 91
2Fe-2S ferredoxin-like Ferredoxin reductase-like, C-terminal NADP-linked domain 93
2Fe-2S ferredoxin-like Riboflavin synthase domain-like 93
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 95
P-loop containing nucleoside triphosphate hydrolases Translation proteins 95
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 84
PYP-like sensor domain (PAS domain) CheY-like 86
cAMP-binding domain-like "Winged helix" DNA-binding domain 82
Molybdenum cofactor-binding domain Molybdenum cofactor-binding domain 82
ParB/Sulfiredoxin KorB DNA-binding domain-like 81
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 85
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 83
Phospholipase D/nuclease Phospholipase D/nuclease 75
CheY-like P-loop containing nucleoside triphosphate hydrolases 73
PYP-like sensor domain (PAS domain) PYP-like sensor domain (PAS domain) 76
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 76
TrpR-like TrpR-like 71
Nucleotide cyclase EAL domain-like 75
Lysozyme-like beta-lactamase/transpeptidase-like 73
Calcium ATPase, transduction domain A HAD-like 76
RmlC-like cupins Homeodomain-like 72
PYP-like sensor domain (PAS domain) Nucleotide cyclase 75
Calcium ATPase, transmembrane domain M HAD-like 76
lambda repressor-like DNA-binding domains RmlC-like cupins 71
"Winged helix" DNA-binding domain Chorismate lyase-like 71
CheY-like Homeodomain-like 62
PreATP-grasp domain Rudiment single hybrid motif 63
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 63
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 64
HlyD-like secretion proteins HlyD-like secretion proteins 63
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 65
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 63
Regulatory protein AraC Homeodomain-like 62
MetI-like MetI-like 61
TrpR-like Homeodomain-like 51
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 53
Homeodomain-like SIS domain 52
Homeodomain-like PYP-like sensor domain (PAS domain) 54
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 51
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein S5 domain 2-like 54
Phage tail proteins gp5 N-terminal domain-like 54
Phage tail proteins Phage tail proteins 54
HAMP domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 53
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 52
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 54
Methylesterase CheB, C-terminal domain CheY-like 53
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 53
CO dehydrogenase molybdoprotein N-domain-like Molybdenum cofactor-binding domain 53
PYP-like sensor domain (PAS domain) EAL domain-like 53
Alpha-L RNA-binding motif Pseudouridine synthase 53
Trypsin-like serine proteases PDZ domain-like 54
Adenine nucleotide alpha hydrolases-like Adenine nucleotide alpha hydrolases-like 41
NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains 44
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 42
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 41
(Trans)glycosidases Glycosyl hydrolase domain 44
HAMP domain-like Homodimeric domain of signal transducing histidine kinase 42
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 42
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 42
EF-G C-terminal domain-like EF-G C-terminal domain-like 42
Triger factor/SurA peptide-binding domain-like FKBP-like 44
6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 43
Translation proteins EF-G C-terminal domain-like 42
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 44
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 43
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 43
2Fe-2S ferredoxin-like alpha-helical ferredoxin 41
PYP-like sensor domain (PAS domain) C-terminal effector domain of the bipartite response regulators 44
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 43
Histidine-containing phosphotransfer domain, HPT domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 44
P-loop containing nucleoside triphosphate hydrolases Hypothetical protein YjiA, C-terminal domain 41
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 43
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 41
"Winged helix" DNA-binding domain NagB/RpiA/CoA transferase-like 41
PurM N-terminal domain-like PurM C-terminal domain-like 42
Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), C-terminal domain 43
Sm-like ribonucleoproteins Mechanosensitive channel protein MscS (YggB), C-terminal domain 43
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 42
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 43
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 43
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 32
Aspartate receptor, ligand-binding domain Methyl-accepting chemotaxis protein (MCP) signaling domain 32
PLP-binding barrel Alanine racemase C-terminal domain-like 31
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 33
ACT-like ACT-like 33
Methylated DNA-protein cysteine methyltransferase domain Methylated DNA-protein cysteine methyltransferase, C-terminal domain 32
HD-domain/PDEase-like Nucleotidyltransferase 33
MoeA N-terminal region -like MoeA C-terminal domain-like 31
PYP-like sensor domain (PAS domain) P-loop containing nucleoside triphosphate hydrolases 32
CBS-domain pair FAD-binding/transporter-associated domain-like 31
Nucleic acid-binding proteins Nucleic acid-binding proteins 33
Phage tail proteins Phage fibre proteins 33
NAD(P)-binding Rossmann-fold domains ClpP/crotonase 32
Pheromone-binding domain of LuxR-like quorum-sensing transcription factors C-terminal effector domain of the bipartite response regulators 32
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 31
GAF domain-like P-loop containing nucleoside triphosphate hydrolases 33
Nucleic acid-binding proteins RuvA domain 2-like 33
6-phosphogluconate dehydrogenase C-terminal domain-like ClpP/crotonase 32
MoeA N-terminal region -like Molybdenum cofactor biosynthesis proteins 31
GroES-like GroES-like 31
Penicillin binding protein dimerisation domain beta-lactamase/transpeptidase-like 32
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 32
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 32
MurCD N-terminal domain MurD-like peptide ligases, peptide-binding domain 31
Ribosomal protein S5 domain 2-like EF-G C-terminal domain-like 32
Chemotaxis receptor methyltransferase CheR, N-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 33
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 32
TPR-like TPR-like 33
Pectin lyase-like Autotransporter 33
Molybdenum cofactor biosynthesis proteins MoeA C-terminal domain-like 31
PDZ domain-like PDZ domain-like 32
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 32
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 32
6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 32
gp5 N-terminal domain-like Phage fibre proteins 33
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 33
E set domains (Trans)glycosidases 33
NAD(P)-binding Rossmann-fold domains UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 32
Aconitase iron-sulfur domain LeuD/IlvD-like 32
Cupredoxins Cupredoxins 33
MurCD N-terminal domain MurD-like peptide ligases, catalytic domain 31
Acetyl-CoA synthetase-like ACP-like 33
Terpenoid cyclases/Protein prenyltransferases Terpenoid cyclases/Protein prenyltransferases 32
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 32
Class II aaRS and biotin synthetases Class II aaRS ABD-related 33
EAL domain-like Sensory domain-like 31
Adhesin YadA, collagen-binding domain Pili subunits 22
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheW-like 22
alpha/beta-Hydrolases alpha/beta-Hydrolases 21
Nqo1 FMN-binding domain-like Nqo1C-terminal domain-like 22
FMN-binding split barrel UbiD C-terminal domain-like 22
lambda integrase-like, N-terminal domain DNA breaking-rejoining enzymes 21
PH0987 N-terminal domain-like Cyclophilin-like 21
Cupredoxins Cytochrome c 22
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 21
Adenine nucleotide alpha hydrolases-like DHS-like NAD/FAD-binding domain 21
Methylesterase CheB, C-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 22
Leukotriene A4 hydrolase N-terminal domain Metalloproteases ("zincins"), catalytic domain 22
Ribonuclease H-like DNA/RNA polymerases 22
Chemotaxis receptor methyltransferase CheR, N-terminal domain CheY-like 22
Clc chloride channel CBS-domain pair 21
Nucleotidyltransferase ACT-like 22
Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha) Thioredoxin-like 21
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphoenolpyruvate/pyruvate domain 22
Histidine-containing phosphotransfer domain, HPT domain CheY-like 22
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 22
Translation proteins Ribosomal protein S5 domain 2-like 21
CoA-dependent acyltransferases CoA-dependent acyltransferases 22
GAF domain-like Homeodomain-like 22
Cytochrome c oxidase subunit II-like, transmembrane region Cupredoxins 22
ACP-like ACP-like 22
HAMP domain-like PYP-like sensor domain (PAS domain) 22
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
Sialidases Sialidases 21
GroEL equatorial domain-like GroEL apical domain-like 21
Nucleotidyltransferase Poly A polymerase C-terminal region-like 22
2Fe-2S ferredoxin-like 4Fe-4S ferredoxins 22
S-adenosyl-L-methionine-dependent methyltransferases Homodimeric domain of signal transducing histidine kinase 22
Chemotaxis receptor methyltransferase CheR, N-terminal domain Homodimeric domain of signal transducing histidine kinase 22
FAD-binding/transporter-associated domain-like CO dehydrogenase flavoprotein C-terminal domain-like 22
Single hybrid motif CoA-dependent acyltransferases 22
L30e-like alpha/beta knot 21
Histidine-containing phosphotransfer domain, HPT domain CheW-like 22
Aminoacid dehydrogenase-like, N-terminal domain Isocitrate/Isopropylmalate dehydrogenase-like 21
DnaK suppressor protein DksA, alpha-hairpin domain Glucocorticoid receptor-like (DNA-binding domain) 21
Adhesin YadA, collagen-binding domain Adhesin YadA, collagen-binding domain 22
Chemotaxis receptor methyltransferase CheR, N-terminal domain PYP-like sensor domain (PAS domain) 22
HD-domain/PDEase-like ACT-like 22
Protease propeptides/inhibitors Subtilisin-like 22
Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 22
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 22
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 22
Cryptochrome/photolyase, N-terminal domain Cryptochrome/photolyase FAD-binding domain 21
tRNA-binding arm Class II aaRS and biotin synthetases 21
Sensory domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 21
MetI-like P-loop containing nucleoside triphosphate hydrolases 22
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 22
NAD(P)-binding Rossmann-fold domains Isocitrate/Isopropylmalate dehydrogenase-like 21
TATA-box binding protein-like DNA-glycosylase 22
Nqo1 middle domain-like Nqo1C-terminal domain-like 22
Thiamin diphosphate-binding fold (THDP-binding) Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 22
Chemotaxis receptor methyltransferase CheR, N-terminal domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 22
Nucleic acid-binding proteins Translation proteins SH3-like domain 22
CoA-dependent acyltransferases ACP-like 22
Rhodanese/Cell cycle control phosphatase Rhodanese/Cell cycle control phosphatase 22
P-loop containing nucleoside triphosphate hydrolases ACT-like 21
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 21
PapD-like Periplasmic chaperone C-domain 22
S-adenosyl-L-methionine-dependent methyltransferases PYP-like sensor domain (PAS domain) 22
Sensory domain-like Methyl-accepting chemotaxis protein (MCP) signaling domain 22
Nucleotidyltransferase TGS-like 22
4Fe-4S ferredoxins Formate dehydrogenase/DMSO reductase, domains 1-3 22
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex CoA-dependent acyltransferases 22
GroEL-intermediate domain like GroEL apical domain-like 21
FAD-linked oxidases, C-terminal domain alpha-helical ferredoxin 22
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 21
FAD/NAD(P)-binding domain 4Fe-4S ferredoxins 21
GroEL equatorial domain-like GroEL-intermediate domain like 21
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 21
Ada DNA repair protein, N-terminal domain (N-Ada 10) Homeodomain-like 22
Folate-binding domain Aminomethyltransferase beta-barrel domain 22
CoA-dependent acyltransferases Acetyl-CoA synthetase-like 22
Globin-like Ferredoxin reductase-like, C-terminal NADP-linked domain 21
NAD(P)-binding Rossmann-fold domains Thiolase-like 22
Pectin lyase-like Pectin lyase-like 22
FAD-linked reductases, C-terminal domain 4Fe-4S ferredoxins 21
S-adenosyl-L-methionine-dependent methyltransferases ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 22
P-loop containing nucleoside triphosphate hydrolases Restriction endonuclease-like 22
HD-domain/PDEase-like TGS-like 22
E set domains Glycosyl hydrolase domain 22
Probable ACP-binding domain of malonyl-CoA ACP transacylase ACP-like 22
Methylesterase CheB, C-terminal domain PYP-like sensor domain (PAS domain) 22
Homeodomain-like Ribonuclease H-like 21
Sensory domain-like Homodimeric domain of signal transducing histidine kinase 21
PLP-dependent transferases Ornithine decarboxylase C-terminal domain 21
Nitrite/Sulfite reductase N-terminal domain-like Nitrite/Sulfite reductase N-terminal domain-like 21
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 22
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 22
GreA transcript cleavage protein, N-terminal domain FKBP-like 21
Single hybrid motif Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 22
Globin-like Riboflavin synthase domain-like 21
FabD/lysophospholipase-like ACP-like 22
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 22
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
ThrRS/AlaRS common domain Class II aaRS and biotin synthetases 22
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphohistidine domain 22
NagB/RpiA/CoA transferase-like NagB/RpiA/CoA transferase-like 22
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 21
FAD-binding/transporter-associated domain-like alpha-helical ferredoxin 22
Nucleotide-diphospho-sugar transferases RmlC-like cupins 22
Homodimeric domain of signal transducing histidine kinase Histidine-containing phosphotransfer domain, HPT domain 22
alpha-helical ferredoxin Nucleotide-binding domain 22
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 22
Translation proteins ThrRS/AlaRS common domain 22
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 21
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 22
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 21
Methylesterase CheB, C-terminal domain Chemotaxis receptor methyltransferase CheR, N-terminal domain 22
Galactose-binding domain-like Galactose-binding domain-like 21
Glutathione synthetase ATP-binding domain-like Phosphoenolpyruvate/pyruvate domain 21
2Fe-2S ferredoxin-like Formate dehydrogenase/DMSO reductase, domains 1-3 22
MOP-like MOP-like 22
Methylesterase CheB, C-terminal domain Homodimeric domain of signal transducing histidine kinase 22
S-adenosyl-L-methionine-dependent methyltransferases CheY-like 22
Nqo1 FMN-binding domain-like Nqo1 middle domain-like 22
Aspartate/glutamate racemase Aspartate/glutamate racemase 21
HMA, heavy metal-associated domain HAD-like 22
Nucleotidyltransferase Nucleotidyltransferase substrate binding subunit/domain 22
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 21
ACP-like NAD(P)-binding Rossmann-fold domains 22
Formyltransferase FMT C-terminal domain-like 21
Nitrite and sulphite reductase 4Fe-4S domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 21
NAD(P)-binding Rossmann-fold domains Acyl-CoA N-acyltransferases (Nat) 22
ACT-like Formyltransferase 21
TPR-like UDP-Glycosyltransferase/glycogen phosphorylase 22
Methylesterase CheB, C-terminal domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 22
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 22
PrpR receptor domain-like Homeodomain-like 11
Nucleotidyltransferase substrate binding subunit/domain ACT-like 11
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 11
Nucleotidylyl transferase Riboflavin kinase-like 11
Phase 1 flagellin Phase 1 flagellin 11
Transcription factor NusA, N-terminal domain Rad51 N-terminal domain-like 11
Methionine synthase domain Methionine synthase activation domain-like 11
EAL domain-like CBS-domain pair 11
Surface presentation of antigens (SPOA) Surface presentation of antigens (SPOA) 11
MFS general substrate transporter Glycerol-3-phosphate (1)-acyltransferase 11
Cytochrome P450 Ferredoxin reductase-like, C-terminal NADP-linked domain 11
P-loop containing nucleoside triphosphate hydrolases HRDC-like 11
PIN domain-like P-loop containing nucleoside triphosphate hydrolases 11
Nucleotidylyl transferase Ribosomal protein L25-like 11
Nucleic acid-binding proteins PheT/TilS domain 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
CheY-binding domain of CheA Homodimeric domain of signal transducing histidine kinase 11
LigB-like LigA subunit of an aromatic-ring-opening dioxygenase LigAB 11
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 11
Ribonuclease H-like RuvA domain 2-like 11
UDP-Glycosyltransferase/glycogen phosphorylase UDP-Glycosyltransferase/glycogen phosphorylase 11
Methylglyoxal synthase-like Cytidine deaminase-like 11
ADC-like Riboflavin synthase domain-like 11
YhbC-like, N-terminal domain YhbC-like, C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 11
Cytochrome P450 NAD(P)-binding Rossmann-fold domains 11
Chemotaxis receptor methyltransferase CheR, N-terminal domain Tropomyosin 11
Calcium ATPase, transduction domain A Metal cation-transporting ATPase, ATP-binding domain N 11
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 11
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 11
Riboflavin synthase domain-like Riboflavin synthase domain-like 11
PurS-like PurM N-terminal domain-like 11
Single hybrid motif alpha/beta-Hydrolases 11
Probable ACP-binding domain of malonyl-CoA ACP transacylase NAD(P)-binding Rossmann-fold domains 11
5' to 3' exonuclease, C-terminal subdomain Ribonuclease H-like 11
Nucleotide-binding domain Nucleotide-binding domain 11
Homo-oligomeric flavin-containing Cys decarboxylases, HFCD CoaB-like 11
PRTase-like PRTase-like 11
Transmembrane di-heme cytochromes a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FMN-linked oxidoreductases 11
Thioredoxin-like FAD/NAD(P)-binding domain 11
Thiolase-like S-adenosyl-L-methionine-dependent methyltransferases 11
Tropomyosin PYP-like sensor domain (PAS domain) 11
Putative DNA-binding domain Initiation factor IF2/eIF5b, domain 3 11
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 11
ISP domain FAD/NAD(P)-binding domain 11
4Fe-4S ferredoxins Respiratory nitrate reductase 1 gamma chain 11
Class I glutamine amidotransferase-like LD-carboxypeptidase A C-terminal domain-like 11
Class II aaRS and biotin synthetases YbaK/ProRS associated domain 11
N-terminal domain of DnaB helicase P-loop containing nucleoside triphosphate hydrolases 11
Nucleotidyltransferase substrate binding subunit/domain Nucleotidyltransferase substrate binding subunit/domain 11
PurS-like PurM C-terminal domain-like 11
S-adenosyl-L-methionine-dependent methyltransferases NAD(P)-binding Rossmann-fold domains 11
DNA polymerase beta, N-terminal domain-like PHP domain-like 11
Glycosyl hydrolase domain Protein kinase-like (PK-like) 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
Cysteine proteinases TPR-like 11
Glucose permease domain IIB Glucose permease domain IIB 11
Tetrapyrrole methylase S-adenosyl-L-methionine-dependent methyltransferases 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
FAD/NAD(P)-binding domain Folate-binding domain 11
Adenine nucleotide alpha hydrolases-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Heme-dependent peroxidases Heme-dependent peroxidases 11
Class I glutamine amidotransferase-like Glycosyl hydrolase domain 11
CarD-like TRCF domain-like 11
DNA breaking-rejoining enzymes Homeodomain-like 11
Probable ACP-binding domain of malonyl-CoA ACP transacylase S-adenosyl-L-methionine-dependent methyltransferases 11
Phosphoenolpyruvate/pyruvate domain Nucleotide-diphospho-sugar transferases 11
Cytochrome c OmpA-like 11
Metal cation-transporting ATPase, ATP-binding domain N Calcium ATPase, transmembrane domain M 11
GAF domain-like Nucleotide cyclase 11
TGS-like Class II aaRS and biotin synthetases 11
PurS-like FGAM synthase PurL, linker domain 11
Prokaryotic type KH domain (KH-domain type II) Prokaryotic type KH domain (KH-domain type II) 11
FAD/NAD(P)-binding domain Nitrite/Sulfite reductase N-terminal domain-like 11
GAF domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
HprK N-terminal domain-like PEP carboxykinase-like 11
Glutathione synthetase ATP-binding domain-like Succinyl-CoA synthetase domains 11
Metalloproteases ("zincins"), catalytic domain PDZ domain-like 11
RuvA domain 2-like BRCT domain 11
FAD/NAD(P)-binding domain Nitrite and sulphite reductase 4Fe-4S domain-like 11
FGAM synthase PurL, linker domain Class I glutamine amidotransferase-like 11
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 11
YgfB-like Sec-C motif 11
Adenine nucleotide alpha hydrolases-like PheT/TilS domain 11
Rad51 N-terminal domain-like Rad51 N-terminal domain-like 11
DAK1/DegV-like DhaL-like 11
E set domains E set domains 11
PPK N-terminal domain-like PHP14-like 11
lambda repressor-like DNA-binding domains LexA/Signal peptidase 11
PEP carboxykinase N-terminal domain PEP carboxykinase-like 11
4'-phosphopantetheinyl transferase 4'-phosphopantetheinyl transferase 11
Heme-dependent catalase-like Class I glutamine amidotransferase-like 11
CO dehydrogenase ISP C-domain like FAD-binding/transporter-associated domain-like 11
Diaminopimelate epimerase-like Diaminopimelate epimerase-like 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
beta-Galactosidase/glucuronidase domain (Trans)glycosidases 11
Nucleic acid-binding proteins DNA helicase RuvA subunit, C-terminal domain 11
TrmE connector domain P-loop containing nucleoside triphosphate hydrolases 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
CheW-like CheY-like 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
Class II aaRS and biotin synthetases Translation proteins 11
YajQ-like YajQ-like 11
S13-like H2TH domain Glucocorticoid receptor-like (DNA-binding domain) 11
Putative DNA-binding domain Anticodon-binding domain of PheRS 11
MOSC N-terminal domain-like PK beta-barrel domain-like 11
Putative DNA-binding domain P-loop containing nucleoside triphosphate hydrolases 11
Chaperone J-domain HSC20 (HSCB), C-terminal oligomerisation domain 11
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 11
Homodimeric domain of signal transducing histidine kinase CheW-like 11
CobE/GbiG C-terminal domain-like Tetrapyrrole methylase 11
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 11
Rudiment single hybrid motif Single hybrid motif 11
Nucleic acid-binding proteins GAD domain-like 11
Nucleotidyltransferase substrate binding subunit/domain HD-domain/PDEase-like 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain ACT-like 11
DNA ligase/mRNA capping enzyme, catalytic domain RuvA domain 2-like 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
Cytochrome c oxidase subunit II-like, transmembrane region OmpA-like 11
Thiolase-like ACP-like 11
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 11
(Trans)glycosidases Protein kinase-like (PK-like) 11
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 11
Ribosomal protein S5 domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
RuvA domain 2-like RuvA domain 2-like 11
FMN-dependent nitroreductase-like FMN-dependent nitroreductase-like 11
FMN-linked oxidoreductases Alpha subunit of glutamate synthase, C-terminal domain 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Nucleic acid-binding proteins 11
Nucleotidylyl transferase tRNA-binding arm 11
PUA domain-like Ribosomal protein S5 domain 2-like 11
Metallo-hydrolase/oxidoreductase Rhodanese/Cell cycle control phosphatase 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
FAD/NAD-linked reductases, dimerisation (C-terminal) domain FabD/lysophospholipase-like 11
GroES-like ACP-like 11
Translation proteins Initiation factor IF2/eIF5b, domain 3 11
His-Me finger endonucleases DNA-binding domain 11
Molybdenum cofactor-binding domain Cytochrome c 11
FGAM synthase PurL, linker domain PurM C-terminal domain-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Alpha subunit of glutamate synthase, C-terminal domain 11
HAMP domain-like Nucleotide cyclase 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Nucleic acid-binding proteins 11
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain "Winged helix" DNA-binding domain 11
UROD/MetE-like UROD/MetE-like 11
R1 subunit of ribonucleotide reductase, N-terminal domain PFL-like glycyl radical enzymes 11
PheT/TilS domain Putative DNA-binding domain 11
Tricorn protease N-terminal domain Galactose-binding domain-like 11
Caspase-like P-loop containing nucleoside triphosphate hydrolases 11
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 11
HPr-like Phosphohistidine domain 11
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 11
YjeF N-terminal domain-like Ribokinase-like 11
Flavoproteins Riboflavin synthase domain-like 11
Nucleotide-diphospho-sugar transferases PilZ domain-like 11
"Winged helix" DNA-binding domain LexA/Signal peptidase 11
Nucleic acid-binding proteins Rad51 N-terminal domain-like 11
JAB1/MPN domain Cysteine proteinases 11
Nucleotidyltransferase PHP domain-like 11
CoA-transferase family III (CaiB/BaiF) CoA-transferase family III (CaiB/BaiF) 11
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 11
"Winged helix" DNA-binding domain MOP-like 11
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 11
Duplicated hybrid motif Phosphohistidine domain 11
CbiG N-terminal domain-like Tetrapyrrole methylase 11
PheT/TilS domain Class II aaRS and biotin synthetases 11
Methylesterase CheB, C-terminal domain Tropomyosin 11
RuvA domain 2-like DNA helicase RuvA subunit, C-terminal domain 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
ClpP/crotonase ClpP/crotonase 11
ABC transporter involved in vitamin B12 uptake, BtuC ABC transporter involved in vitamin B12 uptake, BtuC 11
Cytochrome P450 2Fe-2S ferredoxin-like 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
Ribbon-helix-helix N-terminal domain of bifunctional PutA protein 11
PPK N-terminal domain-like Phospholipase D/nuclease 11
Ribonuclease PH domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
ARM repeat ARM repeat 11
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 11
Trigger factor ribosome-binding domain FKBP-like 11
PrpR receptor domain-like PYP-like sensor domain (PAS domain) 11
Tex N-terminal region-like Ribonuclease H-like 11
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Soluble quinoprotein glucose dehydrogenase NHL repeat 11
Glucocorticoid receptor-like (DNA-binding domain) P-loop containing nucleoside triphosphate hydrolases 11
GIY-YIG endonuclease C-terminal UvrC-binding domain of UvrB 11
(Trans)glycosidases (Trans)glycosidases 11
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 11
Galactose-binding domain-like beta-Galactosidase/glucuronidase domain 11
FabD/lysophospholipase-like S-adenosyl-L-methionine-dependent methyltransferases 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) DNA-glycosylase 11
Metal cation-transporting ATPase, ATP-binding domain N HAD-like 11
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 11
Actin-like ATPase domain SIS domain 11
Single hybrid motif FAD/NAD(P)-binding domain 11
Rho N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
NagB/RpiA/CoA transferase-like alpha-helical ferredoxin 11
Caspase-like Sec63 N-terminal domain-like 11
DNA-glycosylase Nudix 11
Ribonuclease H-like Nucleic acid-binding proteins 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
Thiolase-like GroES-like 11
Formate dehydrogenase/DMSO reductase, domains 1-3 Ferredoxin reductase-like, C-terminal NADP-linked domain 11
Carbamate kinase-like PUA domain-like 11
Ribbon-helix-helix ALDH-like 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
Periplasmic binding protein-like II NosL/MerB-like 11
S-adenosyl-L-methionine-dependent methyltransferases TPR-like 11
YrdC/RibB RibA-like 11
2Fe-2S ferredoxin-like FAD-binding/transporter-associated domain-like 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
Bacterial muramidases Lysozyme-like 11
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 11
P-loop containing nucleoside triphosphate hydrolases Smc hinge domain 11
Succinyl-CoA synthetase domains Succinyl-CoA synthetase domains 11
Ribosomal protein S5 domain 2-like HSP90 C-terminal domain 11
FMN-linked oxidoreductases 4Fe-4S ferredoxins 11
FAD-binding/transporter-associated domain-like Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain 11
Terpenoid synthases S-adenosyl-L-methionine-dependent methyltransferases 11
HMA, heavy metal-associated domain HMA, heavy metal-associated domain 11
C-terminal UvrC-binding domain of UvrB RuvA domain 2-like 11
Translation proteins Translation proteins 11
ParB/Sulfiredoxin S-adenosyl-L-methionine-dependent methyltransferases 11
ISP domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 11
MesJ substrate recognition domain-like PheT/TilS domain 11
PurS-like Class I glutamine amidotransferase-like 11
(Trans)glycosidases Class I glutamine amidotransferase-like 11
Class II aaRS and biotin synthetases GAD domain-like 11
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 11
Actin-like ATPase domain Homeodomain-like 11
lambda repressor-like DNA-binding domains CheY-like 11
Aconitase B, N-terminal domain LeuD/IlvD-like 11
DinB/YfiT-like putative metalloenzymes C-type lectin-like 11
TolB, N-terminal domain Tricorn protease N-terminal domain 11
Thioredoxin-like TPR-like 11
Transcription factor NusA, N-terminal domain Nucleic acid-binding proteins 11
PDZ domain-like ClpP/crotonase 11
ABC transporter transmembrane region ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 11
PurM C-terminal domain-like Class I glutamine amidotransferase-like 11
Ribosomal protein L6 Ribosomal protein L6 11
PIN domain-like Ribonuclease H-like 11
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 11
PUA domain-like alpha/beta knot 11
L9 N-domain-like Ribosomal protein L9 C-domain 11
Nucleic acid-binding proteins ArfGap/RecO-like zinc finger 11
Dihydropteroate synthetase-like Methionine synthase activation domain-like 11
GAF domain-like PYP-like sensor domain (PAS domain) 11
N-terminal domain of bifunctional PutA protein FAD-linked oxidoreductase 11
Glutamyl tRNA-reductase catalytic, N-terminal domain NAD(P)-binding Rossmann-fold domains 11
Glutamyl tRNA-reductase catalytic, N-terminal domain Glutamyl tRNA-reductase dimerization domain 11
Adenine nucleotide alpha hydrolases-like Homodimeric domain of signal transducing histidine kinase 11
Sigma3 and sigma4 domains of RNA polymerase sigma factors NTF2-like 11
5' to 3' exonuclease, C-terminal subdomain DNA/RNA polymerases 11
HAMP domain-like Histidine-containing phosphotransfer domain, HPT domain 11
Glutamine synthetase/guanido kinase GatB/YqeY motif 11
P-loop containing nucleoside triphosphate hydrolases ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Calcium-dependent phosphotriesterase Soluble quinoprotein glucose dehydrogenase 11
FAD/NAD(P)-binding domain FabD/lysophospholipase-like 11
Thioredoxin-like Thioredoxin-like 11
ClpP/crotonase NfeD domain-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 11
Lysozyme-like LysM domain 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 11
Creatinase/prolidase N-terminal domain Creatinase/prolidase N-terminal domain 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
Thiolase-like FabD/lysophospholipase-like 11
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 11
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 11
Methionine synthase domain Cobalamin (vitamin B12)-binding domain 11
Homeodomain-like DNA-glycosylase 11
PreATP-grasp domain PreATP-grasp domain 11
Fumarylacetoacetate hydrolase, FAH, N-terminal domain FAH 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleotidylyl transferase 11
CheY-like Nucleotide cyclase 11
Tropomyosin ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
Class II aaRS and biotin synthetases C-terminal domain of transcriptional repressors 11
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 11
S-adenosyl-L-methionine-dependent methyltransferases ACP-like 11
Periplasmic binding protein-like II Cytochrome c 11
Cytochrome c oxidase subunit I-like Cytochrome c oxidase subunit III-like 11
Prokaryotic type KH domain (KH-domain type II) Rad51 N-terminal domain-like 11
GIY-YIG endonuclease RuvA domain 2-like 11
PurM N-terminal domain-like Class I glutamine amidotransferase-like 11
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 11
FAD/NAD(P)-binding domain HI0933 insert domain-like 11
Tryptophan synthase beta subunit-like PLP-dependent enzymes ACT-like 11
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 11
P-loop containing nucleoside triphosphate hydrolases TrpR-like 11
Carbamate kinase-like ACT-like 11
PYP-like sensor domain (PAS domain) Methyl-accepting chemotaxis protein (MCP) signaling domain 11
P-loop containing nucleoside triphosphate hydrolases TGS-like 11
Adenine nucleotide alpha hydrolases-like GAF domain-like 11
DsbC/DsbG N-terminal domain-like Thioredoxin-like 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleic acid-binding proteins 11
Sigma2 domain of RNA polymerase sigma factors NTF2-like 11
Thiolase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 11
Zinc beta-ribbon DNA primase core 11
Dihydropteroate synthetase-like Methionine synthase domain 11
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 11
RNase III domain-like dsRNA-binding domain-like 11
Homeodomain-like C-terminal effector domain of the bipartite response regulators 11
EspE N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
MCP/YpsA-like "Winged helix" DNA-binding domain 11
DNA topoisomerase I domain DNA breaking-rejoining enzymes 11
Cupredoxins OmpA-like 11
Acetyl-CoA synthetase-like Acetyl-CoA synthetase-like 11
Single hybrid motif FAD/NAD-linked reductases, dimerisation (C-terminal) domain 11
FliG FliG 11
Actin-like ATPase domain HD-domain/PDEase-like 11
PRC-barrel domain PRC-barrel domain 11
Xylose isomerase-like Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 11
PreATP-grasp domain Methylglyoxal synthase-like 11
YbaK/ProRS associated domain Class II aaRS ABD-related 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 11
ADC-like Ferredoxin reductase-like, C-terminal NADP-linked domain 11
PLP-dependent transferases PLP-dependent transferases 11
beta-Galactosidase/glucuronidase domain beta-Galactosidase/glucuronidase domain 11
Probable ACP-binding domain of malonyl-CoA ACP transacylase GroES-like 11
Voltage-gated potassium channels NAD(P)-binding Rossmann-fold domains 11
Flavoproteins Ferredoxin reductase-like, C-terminal NADP-linked domain 11
lambda repressor-like DNA-binding domains PYP-like sensor domain (PAS domain) 11
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 11
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
4Fe-4S ferredoxins ADC-like 11
Cytidine deaminase-like Dihydrofolate reductase-like 11
NAD(P)-binding Rossmann-fold domains TrkA C-terminal domain-like 11
FKBP-like FKBP-like 11
PheT/TilS domain Anticodon-binding domain of PheRS 11
Nucleotidyltransferase Nucleotidyltransferase 11
TGS-like Class II aaRS ABD-related 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 11
ABC transporter transmembrane region CheY-like 11
N-terminal domain of bifunctional PutA protein ALDH-like 11
S-adenosyl-L-methionine-dependent methyltransferases Tropomyosin 11
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
CheC-like Surface presentation of antigens (SPOA) 11
Galactose-binding domain-like (Trans)glycosidases 11
Pseudouridine synthase PUA domain-like 11
Eukaryotic type KH-domain (KH-domain type I) Nucleic acid-binding proteins 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase HSP90 C-terminal domain 11
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 11
S-adenosyl-L-methionine-dependent methyltransferases EreA/ChaN-like 11
CbiG N-terminal domain-like CobE/GbiG C-terminal domain-like 11
FAD/NAD(P)-binding domain Aminomethyltransferase beta-barrel domain 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
NAD(P)-binding Rossmann-fold domains ACT-like 11
Chaperone J-domain HSP40/DnaJ peptide-binding domain 11
DNA clamp DNA clamp 11
Sensory domain-like Nucleotide cyclase 11
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 11
Periplasmic binding protein-like II ACT-like 11
FMN-linked oxidoreductases Nucleotide-binding domain 11
Carboxypeptidase regulatory domain-like (Trans)glycosidases 11
ADC-like Flavoproteins 11
Urease metallochaperone UreE, N-terminal domain Urease metallochaperone UreE, C-terminal domain 11
Fe-S cluster assembly (FSCA) domain-like P-loop containing nucleoside triphosphate hydrolases 11
Cytochrome c oxidase subunit II-like, transmembrane region Cytochrome c 11
GAF domain-like GAF domain-like 11
"Winged helix" DNA-binding domain Acyl-CoA N-acyltransferases (Nat) 11
Tropomyosin P-loop containing nucleoside triphosphate hydrolases 11
HPr-like Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 11
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 11
Tex N-terminal region-like RuvA domain 2-like 11
Nucleic acid-binding proteins S-adenosyl-L-methionine-dependent methyltransferases 11
Homeodomain-like Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
PUA domain-like S-adenosyl-L-methionine-dependent methyltransferases 11
Nucleic acid-binding proteins Prokaryotic type KH domain (KH-domain type II) 11
Tex N-terminal region-like Nucleic acid-binding proteins 11
Putative DNA-binding domain Translation proteins 11
Carbamate kinase-like Acyl-CoA N-acyltransferases (Nat) 11
Nucleic acid-binding proteins Anticodon-binding domain of PheRS 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
2Fe-2S ferredoxin-like ADC-like 11
RBP11-like subunits of RNA polymerase C-terminal domain of RNA polymerase alpha subunit 11
Tropomyosin CheY-like 11
P-loop containing nucleoside triphosphate hydrolases CarD-like 11
Duplicated hybrid motif HPr-like 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
Peptidase/esterase 'gauge' domain alpha/beta-Hydrolases 11
Duplicated hybrid motif Phosphoenolpyruvate/pyruvate domain 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Adenine nucleotide alpha hydrolases-like 11
Ribbon-helix-helix FAD-linked oxidoreductase 11
DNA polymerase beta, N-terminal domain-like RuvA domain 2-like 11
P-loop containing nucleoside triphosphate hydrolases CBS-domain pair 11
TGS-like ThrRS/AlaRS common domain 11
GAF domain-like EAL domain-like 11
FabD/lysophospholipase-like NAD(P)-binding Rossmann-fold domains 11
Rho N-terminal domain-like Nucleic acid-binding proteins 11
CheY-binding domain of CheA ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
PIN domain-like DNA/RNA polymerases 11
DNA polymerase beta, N-terminal domain-like Nucleotidyltransferase 11
MalF N-terminal region-like MetI-like 11
Metallo-dependent phosphatases 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain 11
GAF domain-like Homodimeric domain of signal transducing histidine kinase 11
Periplasmic binding protein-like I Homeodomain-like 11
(Phosphotyrosine protein) phosphatases II FAD/NAD(P)-binding domain 11
Elongation factor Ts (EF-Ts), dimerisation domain Elongation factor Ts (EF-Ts), dimerisation domain 11
PK beta-barrel domain-like PK C-terminal domain-like 11
Translation proteins "Winged helix" DNA-binding domain 11
FGAM synthase PurL, linker domain PurM N-terminal domain-like 11
FAD-linked oxidoreductase ALDH-like 11
PYP-like sensor domain (PAS domain) Histidine-containing phosphotransfer domain, HPT domain 11
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 11
Ribonuclease H-like GIY-YIG endonuclease 11
NagB/RpiA/CoA transferase-like D-ribose-5-phosphate isomerase (RpiA), lid domain 11
Nucleotide-diphospho-sugar transferases (Trans)glycosidases 11
Chorismate mutase II Periplasmic binding protein-like II 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
Formate dehydrogenase/DMSO reductase, domains 1-3 Riboflavin synthase domain-like 11
PHP14-like Phospholipase D/nuclease 11
Duplicated hybrid motif Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 11
Tropomyosin Homodimeric domain of signal transducing histidine kinase 11
Dihydropteroate synthetase-like Cobalamin (vitamin B12)-binding domain 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
P-loop containing nucleoside triphosphate hydrolases C-terminal UvrC-binding domain of UvrB 11
ADC synthase D-aminoacid aminotransferase-like PLP-dependent enzymes 11
Cobalamin (vitamin B12)-binding domain Methionine synthase activation domain-like 11
Epsilon subunit of F1F0-ATP synthase N-terminal domain Epsilon subunit of F1F0-ATP synthase C-terminal domain 11
L domain-like Protein kinase-like (PK-like) 11
alpha/beta-Hydrolases NAD(P)-binding Rossmann-fold domains 11
(Trans)glycosidases Beta-D-glucan exohydrolase, C-terminal domain 11
Chorismate mutase II ACT-like 11
CheY-binding domain of CheA CheW-like 11
Pili subunits GspK insert domain-like 11
Homeodomain-like Methylated DNA-protein cysteine methyltransferase domain 11
Aconitase B, N-terminal domain Aconitase iron-sulfur domain 11
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 11
Transcription factor NusA, N-terminal domain Prokaryotic type KH domain (KH-domain type II) 11
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 11
FabD/lysophospholipase-like GroES-like 11
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Eukaryotic type KH-domain (KH-domain type I) 11
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 11
Single hybrid motif Single hybrid motif 11
N-terminal domain of MutM-like DNA repair proteins Glucocorticoid receptor-like (DNA-binding domain) 11
"Winged helix" DNA-binding domain Actin-like ATPase domain 11
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 11
Adenine nucleotide alpha hydrolases-like MesJ substrate recognition domain-like 11
Acetyl-CoA synthetase-like NAD(P)-binding Rossmann-fold domains 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
FMN-binding split barrel Nudix 11
Translation proteins PRC-barrel domain 11
2Fe-2S ferredoxin-like CO dehydrogenase flavoprotein C-terminal domain-like 11
Sensory domain-like HAMP domain-like 11
TGS-like ACT-like 11
Homeodomain-like TATA-box binding protein-like 11
Cytochrome P450 Riboflavin synthase domain-like 11
Acyl-CoA N-acyltransferases (Nat) Acyl-CoA N-acyltransferases (Nat) 11
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 11
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 11
Glutathione synthetase ATP-binding domain-like Single hybrid motif 11
PreATP-grasp domain Single hybrid motif 11
Nucleic acid-binding proteins Putative DNA-binding domain 11
Origin of replication-binding domain, RBD-like P-loop containing nucleoside triphosphate hydrolases 11
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 11
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
NAD(P)-binding Rossmann-fold domains Glutamyl tRNA-reductase dimerization domain 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
CBS-domain pair Nucleotide cyclase 11
Purple acid phosphatase, N-terminal domain Metallo-dependent phosphatases 11
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 11
Hsp33 domain HSP33 redox switch-like 11
Formate dehydrogenase/DMSO reductase, domains 1-3 Flavoproteins 11
Protein kinase-like (PK-like) P-loop containing nucleoside triphosphate hydrolases 11
NagB/RpiA/CoA transferase-like 4Fe-4S ferredoxins 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) Methylated DNA-protein cysteine methyltransferase domain 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11
HPr-like Phosphoenolpyruvate/pyruvate domain 11
CO dehydrogenase ISP C-domain like CO dehydrogenase flavoprotein C-terminal domain-like 11
FMN-linked oxidoreductases FAD/NAD(P)-binding domain 11
Histidine-containing phosphotransfer domain, HPT domain CheY-binding domain of CheA 11
PrpR receptor domain-like P-loop containing nucleoside triphosphate hydrolases 11
Tropomyosin TPR-like 11
Nucleotidylyl transferase Nucleic acid-binding proteins 11
Nucleic acid-binding proteins BRCT domain 11
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 11
P-loop containing nucleoside triphosphate hydrolases Sec63 N-terminal domain-like 11
Succinyl-CoA synthetase domains Acyl-CoA N-acyltransferases (Nat) 11
Macro domain-like Zn-dependent exopeptidases 11
Carbon-nitrogen hydrolase Adenine nucleotide alpha hydrolases-like 11
N-acetylmuramoyl-L-alanine amidase-like PGBD-like 11
Rhodanese/Cell cycle control phosphatase P-loop containing nucleoside triphosphate hydrolases 11
S-adenosyl-L-methionine-dependent methyltransferases GroES-like 11
Aldolase post-HMGL domain-like 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) TATA-box binding protein-like 11

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