SUPERFAMILY 1.75 HMM library and genome assignments server

Domain combination pairs in Azorhizobium caulinodans ORS 571

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

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Adjacent domain pairs graph

Graph of adjacent domain pairs.


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Domain combination pairs

725 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
"Winged helix" DNA-binding domain Periplasmic binding protein-like II 752
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 3917
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 3112
"Winged helix" DNA-binding domain GntR ligand-binding domain-like 274
Homeodomain-like Tetracyclin repressor-like, C-terminal domain 213
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 214
GroES-like NAD(P)-binding Rossmann-fold domains 194
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 185
Metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 176
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 1610
P-loop containing nucleoside triphosphate hydrolases MOP-like 162
Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase C-terminal domain-like 153
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 152
Thioredoxin-like GST C-terminal domain-like 151
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 159
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 143
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 141
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 144
C-terminal effector domain of the bipartite response regulators CheY-like 144
"Winged helix" DNA-binding domain GAF domain-like 143
Homeodomain-like Homeodomain-like 134
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 124
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB transmembrane domain 114
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 114
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 114
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 113
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 115
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB transmembrane domain 114
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 114
Actin-like ATPase domain Actin-like ATPase domain 114
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 117
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 114
PYP-like sensor domain (PAS domain) Nucleotide cyclase 107
Nucleotide cyclase EAL domain-like 105
Thiolase-like Thiolase-like 102
PYP-like sensor domain (PAS domain) PYP-like sensor domain (PAS domain) 1010
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 94
Formate dehydrogenase/DMSO reductase, domains 1-3 ADC-like 94
Calcium ATPase, transduction domain A HAD-like 94
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 94
Calcium ATPase, transmembrane domain M HAD-like 94
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 95
"Winged helix" DNA-binding domain Dimeric alpha+beta barrel 81
P-loop containing nucleoside triphosphate hydrolases Translation proteins 87
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheY-like 88
Cytochrome c Cytochrome c 88
CheY-like Homeodomain-like 82
lambda repressor-like DNA-binding domains Periplasmic binding protein-like I 71
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 72
Class I glutamine amidotransferase-like Homeodomain-like 73
2Fe-2S ferredoxin-like CO dehydrogenase ISP C-domain like 73
CheY-like P-loop containing nucleoside triphosphate hydrolases 61
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 64
Pectin lyase-like Autotransporter 66
PreATP-grasp domain Rudiment single hybrid motif 63
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 65
Homodimeric domain of signal transducing histidine kinase CheY-like 66
HlyD-like secretion proteins HlyD-like secretion proteins 64
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 61
lambda repressor-like DNA-binding domains RmlC-like cupins 62
TPR-like TPR-like 64
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 65
PurM N-terminal domain-like PurM C-terminal domain-like 63
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 63
PYP-like sensor domain (PAS domain) EAL domain-like 53
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 52
Nucleic acid-binding proteins Nucleic acid-binding proteins 54
"Winged helix" DNA-binding domain PLP-dependent transferases 51
Lysozyme-like PGBD-like 52
Folate-binding domain Aminomethyltransferase beta-barrel domain 54
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 54
Molybdenum cofactor-binding domain CO dehydrogenase molybdoprotein N-domain-like 53
P-loop containing nucleoside triphosphate hydrolases GAF domain-like 55
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 51
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 43
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 41
Protein kinase-like (PK-like) P-loop containing nucleoside triphosphate hydrolases 44
Sm-like ribonucleoproteins Mechanosensitive channel protein MscS (YggB), C-terminal domain 43
PLP-binding barrel Alanine racemase C-terminal domain-like 41
(Trans)glycosidases Glycosyl hydrolase domain 44
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 43
Ribosomal protein S5 domain 2-like P-loop containing nucleoside triphosphate hydrolases 44
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 44
HAMP domain-like Methyl-accepting chemotaxis protein (MCP) signaling domain 41
MetI-like MetI-like 42
Molybdenum cofactor-binding domain Molybdenum cofactor-binding domain 42
P-loop containing nucleoside triphosphate hydrolases Hypothetical protein YjiA, C-terminal domain 41
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 44
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 43
Enolase N-terminal domain-like Enolase C-terminal domain-like 41
cAMP-binding domain-like "Winged helix" DNA-binding domain 42
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 41
PYP-like sensor domain (PAS domain) CheY-like 44
PYP-like sensor domain (PAS domain) Methyl-accepting chemotaxis protein (MCP) signaling domain 44
PYP-like sensor domain (PAS domain) GAF domain-like 44
GAF domain-like Nucleotide cyclase 44
Triger factor/SurA peptide-binding domain-like FKBP-like 44
Nqo1 middle domain-like Nqo1C-terminal domain-like 32
NAD(P)-binding Rossmann-fold domains ACT-like 33
Rudiment single hybrid motif Single hybrid motif 32
E set domains (Trans)glycosidases 33
Homeodomain-like SIS domain 31
Thioesterase/thiol ester dehydrase-isomerase Thioesterase/thiol ester dehydrase-isomerase 31
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 31
GAF domain-like Homodimeric domain of signal transducing histidine kinase 33
Translation proteins EF-G C-terminal domain-like 33
Homeodomain-like Ribonuclease H-like 31
PreATP-grasp domain Single hybrid motif 32
Nqo1 FMN-binding domain-like Nqo1C-terminal domain-like 32
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 32
Histidine-containing phosphotransfer domain, HPT domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 33
Nqo1 FMN-binding domain-like Nqo1 middle domain-like 32
P-loop containing nucleoside triphosphate hydrolases ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 33
PDZ domain-like PDZ domain-like 31
Class II aaRS and biotin synthetases Class II aaRS ABD-related 33
Histidine-containing phosphotransfer domain, HPT domain CheY-like 33
Nucleic acid-binding proteins RuvA domain 2-like 33
PYP-like sensor domain (PAS domain) P-loop containing nucleoside triphosphate hydrolases 33
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 32
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 33
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 32
Nitrite/Sulfite reductase N-terminal domain-like Nitrite/Sulfite reductase N-terminal domain-like 32
Pectin lyase-like Pectin lyase-like 33
"Winged helix" DNA-binding domain Chorismate lyase-like 32
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 33
Glutathione synthetase ATP-binding domain-like Single hybrid motif 32
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 33
Ferredoxin reductase-like, C-terminal NADP-linked domain 2Fe-2S ferredoxin-like 31
EF-G C-terminal domain-like EF-G C-terminal domain-like 33
CBS-domain pair FAD-binding/transporter-associated domain-like 31
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 32
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 33
Adenine nucleotide alpha hydrolases-like DHS-like NAD/FAD-binding domain 32
Alpha-L RNA-binding motif Pseudouridine synthase 32
FAD-binding/transporter-associated domain-like CO dehydrogenase flavoprotein C-terminal domain-like 31
P-loop containing nucleoside triphosphate hydrolases Homodimeric domain of signal transducing histidine kinase 33
Cobalamin (vitamin B12)-dependent enzymes Cobalamin (vitamin B12)-binding domain 31
Cupredoxins Cupredoxins 32
Trypsin-like serine proteases PDZ domain-like 31
Nitrite and sulphite reductase 4Fe-4S domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 32
GAF domain-like EAL domain-like 33
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 31
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 33
Lysozyme-like beta-lactamase/transpeptidase-like 32
Riboflavin synthase domain-like 2Fe-2S ferredoxin-like 31
TPR-like UDP-Glycosyltransferase/glycogen phosphorylase 32
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 33
Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 32
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 31
GAF domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 33
ACT-like ACT-like 33
HMA, heavy metal-associated domain HAD-like 21
Chaperone J-domain HSP40/DnaJ peptide-binding domain 22
Cyclophilin-like PH0987 N-terminal domain-like 22
Nucleotidyltransferase ACT-like 22
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 21
HAMP domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 22
Adenine nucleotide alpha hydrolases-like Adenine nucleotide alpha hydrolases-like 21
GroEL-intermediate domain like GroEL apical domain-like 21
TrpR-like Ribonuclease H-like 21
6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 22
NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains 22
4Fe-4S ferredoxins Formate dehydrogenase/DMSO reductase, domains 1-3 22
PGBD-like L,D-transpeptidase catalytic domain-like 22
Nucleotidyltransferase Nucleotidyltransferase substrate binding subunit/domain 22
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 21
Cytochrome c oxidase subunit II-like, transmembrane region Cupredoxins 22
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 22
CheY-like Nucleotide cyclase 21
Flavoproteins Ferredoxin reductase-like, C-terminal NADP-linked domain 22
MgtE N-terminal domain-like CBS-domain pair 21
E set domains Glycosyl hydrolase domain 22
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 22
L30e-like alpha/beta knot 21
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 22
Sensory domain-like Homodimeric domain of signal transducing histidine kinase 21
Subtilisin-like Autotransporter 22
ABC transporter involved in vitamin B12 uptake, BtuC ABC transporter involved in vitamin B12 uptake, BtuC 21
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex CoA-dependent acyltransferases 21
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), C-terminal domain 22
Histidine-containing phosphotransfer domain, HPT domain Homodimeric domain of signal transducing histidine kinase 22
2Fe-2S ferredoxin-like 4Fe-4S ferredoxins 22
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 22
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 21
Thioesterase/thiol ester dehydrase-isomerase Isocitrate/Isopropylmalate dehydrogenase-like 21
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 21
Flavoproteins Riboflavin synthase domain-like 22
beta-Roll beta-Roll 22
FAD/NAD(P)-binding domain Folate-binding domain 22
NAD(P)-binding Rossmann-fold domains ClpP/crotonase 22
Acid phosphatase/Vanadium-dependent haloperoxidase Autotransporter 22
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 21
Diaminopimelate epimerase-like Diaminopimelate epimerase-like 21
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 22
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 21
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 22
Glutathione synthetase ATP-binding domain-like Succinyl-CoA synthetase domains 22
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 21
Single hybrid motif Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 21
Protein kinase-like (PK-like) Homodimeric domain of signal transducing histidine kinase 22
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 22
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 22
RmlC-like cupins Homeodomain-like 22
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 22
Sm-like ribonucleoproteins cAMP-binding domain-like 21
HAMP domain-like Homodimeric domain of signal transducing histidine kinase 22
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 21
Sensory domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 21
"Winged helix" DNA-binding domain NagB/RpiA/CoA transferase-like 21
GAF domain-like Homeodomain-like 22
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 21
Single hybrid motif CoA-dependent acyltransferases 21
PK beta-barrel domain-like PK C-terminal domain-like 21
Nucleotidyltransferase Poly A polymerase C-terminal region-like 22
TrkA C-terminal domain-like TrkA C-terminal domain-like 22
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 21
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 22
ThrRS/AlaRS common domain Class II aaRS and biotin synthetases 22
GroEL equatorial domain-like GroEL apical domain-like 21
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 22
2Fe-2S ferredoxin-like Formate dehydrogenase/DMSO reductase, domains 1-3 22
Formate/glycerate dehydrogenase catalytic domain-like ACT-like 22
Phospholipase D/nuclease Phospholipase D/nuclease 22
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 21
PLP-dependent transferases Ornithine decarboxylase C-terminal domain 22
S-adenosyl-L-methionine-dependent methyltransferases S-adenosyl-L-methionine-dependent methyltransferases 21
ClpP/crotonase ClpP/crotonase 21
CBS-domain pair MgtE membrane domain-like 21
Translation proteins SH3-like domain Nucleic acid-binding proteins 22
Ribonuclease H-like DNA/RNA polymerases 22
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 22
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
MgtE N-terminal domain-like MgtE membrane domain-like 21
Aspartate/glutamate racemase Aspartate/glutamate racemase 21
ACT-like Formyltransferase 21
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 21
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 22
Mechanosensitive channel protein MscS (YggB), C-terminal domain cAMP-binding domain-like 21
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 22
FAD/NAD(P)-binding domain Aminomethyltransferase beta-barrel domain 22
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 22
2Fe-2S ferredoxin-like alpha-helical ferredoxin 22
tRNA-binding arm Class II aaRS and biotin synthetases 21
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 21
GroEL equatorial domain-like GroEL-intermediate domain like 21
Rhodanese/Cell cycle control phosphatase Rhodanese/Cell cycle control phosphatase 21
Protein kinase-like (PK-like) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 22
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 22
N-terminal domain of DnaB helicase P-loop containing nucleoside triphosphate hydrolases 21
Protein kinase-like (PK-like) GAF domain-like 22
Zinc beta-ribbon DNA primase core 22
6-phosphogluconate dehydrogenase C-terminal domain-like ClpP/crotonase 22
FAD/NAD(P)-binding domain FMN-linked oxidoreductases 22
(Trans)glycosidases Nucleotide-diphospho-sugar transferases 11
GreA transcript cleavage protein, N-terminal domain FKBP-like 11
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FMN-linked oxidoreductases 11
Thiolase-like GroES-like 11
Urease metallochaperone UreE, N-terminal domain Urease metallochaperone UreE, C-terminal domain 11
Molybdenum cofactor biosynthesis proteins Nucleotide-diphospho-sugar transferases 11
Class II aaRS and biotin synthetases Translation proteins 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
"Winged helix" DNA-binding domain S-adenosyl-L-methionine-dependent methyltransferases 11
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 11
Riboflavin synthase domain-like PYP-like sensor domain (PAS domain) 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Eukaryotic type KH-domain (KH-domain type I) 11
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 11
PheT/TilS domain Anticodon-binding domain of PheRS 11
Glutamine synthetase/guanido kinase GatB/YqeY motif 11
P-loop containing nucleoside triphosphate hydrolases Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain 11
Carbohydrate binding domain Fibronectin type III 11
SMI1/KNR4-like Ankyrin repeat 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
Acylphosphatase/BLUF domain-like YrdC/RibB 11
PDZ domain-like ClpP/crotonase 11
DAK1/DegV-like DhaL-like 11
DNA clamp DNA clamp 11
PP2C-like Histidine-containing phosphotransfer domain, HPT domain 11
NAD(P)-binding Rossmann-fold domains UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 11
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 11
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 11
MoeA N-terminal region -like MoeA C-terminal domain-like 11
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 11
Acetyl-CoA synthetase-like alpha/beta-Hydrolases 11
alpha/beta-Hydrolases AhpD-like 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 11
Cyclophilin-like Single hybrid motif 11
MoeA N-terminal region -like Molybdenum cofactor biosynthesis proteins 11
Cytidine deaminase-like Dihydrofolate reductase-like 11
TGS-like ThrRS/AlaRS common domain 11
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 11
Periplasmic binding protein-like II ACT-like 11
Translation proteins Ribosomal protein S5 domain 2-like 11
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 11
Class II aaRS and biotin synthetases C-terminal domain of transcriptional repressors 11
RuvA domain 2-like JAB1/MPN domain 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Nucleic acid-binding proteins 11
CheC-like Surface presentation of antigens (SPOA) 11
Thioredoxin-like Nqo1C-terminal domain-like 11
PreATP-grasp domain Cyclophilin-like 11
Homocysteine S-methyltransferase Cobalamin (vitamin B12)-binding domain 11
Thiolase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 11
PEP carboxykinase N-terminal domain PEP carboxykinase-like 11
Thioredoxin-like Nqo1 middle domain-like 11
Tetrapyrrole methylase S-adenosyl-L-methionine-dependent methyltransferases 11
Nucleic acid-binding proteins BRCT domain 11
Formate/glycerate dehydrogenase catalytic domain-like Serine metabolism enzymes domain 11
YjeF N-terminal domain-like Ribokinase-like 11
Tryptophan synthase beta subunit-like PLP-dependent enzymes ACT-like 11
Fibronectin type III (Trans)glycosidases 11
Methylglyoxal synthase-like Cytidine deaminase-like 11
Probable ACP-binding domain of malonyl-CoA ACP transacylase NAD(P)-binding Rossmann-fold domains 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 11
Protein kinase-like (PK-like) PYP-like sensor domain (PAS domain) 11
Nucleic acid-binding proteins Anticodon-binding domain of PheRS 11
FliG FliG 11
beta-lactamase/transpeptidase-like Penicillin-binding protein associated domain 11
YebC-like PFL-like glycyl radical enzymes 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphohistidine domain 11
Nucleotidyltransferase Nucleotidyltransferase 11
Tex N-terminal region-like RuvA domain 2-like 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
Translation proteins PRC-barrel domain 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
GAF domain-like Phosphoenolpyruvate/pyruvate domain 11
DNA ligase/mRNA capping enzyme, catalytic domain RuvA domain 2-like 11
Ferritin-like Calcium ATPase, transmembrane domain M 11
Nucleotide-diphospho-sugar transferases EspE N-terminal domain-like 11
NAD(P)-binding Rossmann-fold domains TrkA C-terminal domain-like 11
HAMP domain-like PYP-like sensor domain (PAS domain) 11
Thiolase-like ACP-like 11
Nucleotide-diphospho-sugar transferases IpsF-like 11
TrmE connector domain P-loop containing nucleoside triphosphate hydrolases 11
Heme-dependent peroxidases Heme-dependent peroxidases 11
Glutathione synthetase ATP-binding domain-like PH0987 N-terminal domain-like 11
GAF domain-like GAF domain-like 11
CheY-like "Winged helix" DNA-binding domain 11
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 11
PUA domain-like Ribosomal protein S5 domain 2-like 11
FabD/lysophospholipase-like GroES-like 11
Phage tail proteins Phage fibre proteins 11
Acid proteases Autotransporter 11
Urease, gamma-subunit Urease, beta-subunit 11
Ankyrin repeat Ankyrin repeat 11
Ribonuclease H-like RuvA domain 2-like 11
alpha/beta-Hydrolases alpha/beta-Hydrolases 11
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 11
NAD(P)-binding Rossmann-fold domains Siroheme synthase middle domains-like 11
PUA domain-like alpha/beta knot 11
PHP14-like Phospholipase D/nuclease 11
AF0104/ALDC/Ptd012-like AF0104/ALDC/Ptd012-like 11
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 11
(Trans)glycosidases Protein kinase-like (PK-like) 11
HD-domain/PDEase-like Nucleotidyltransferase 11
N-terminal domain of bifunctional PutA protein FAD-linked oxidoreductase 11
DnaK suppressor protein DksA, alpha-hairpin domain Glucocorticoid receptor-like (DNA-binding domain) 11
Subtilisin-like Pectin lyase-like 11
Carbamate kinase-like PUA domain-like 11
Adenine nucleotide alpha hydrolases-like Homodimeric domain of signal transducing histidine kinase 11
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 11
CoA-transferase family III (CaiB/BaiF) CoA-transferase family III (CaiB/BaiF) 11
Translation proteins ThrRS/AlaRS common domain 11
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
Nucleic acid-binding proteins Putative DNA-binding domain 11
HD-domain/PDEase-like ACT-like 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Alpha subunit of glutamate synthase, C-terminal domain 11
Nucleic acid-binding proteins DNA helicase RuvA subunit, C-terminal domain 11
Cytochrome P450 Flavoproteins 11
P-loop containing nucleoside triphosphate hydrolases TrpR-like 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11
ISP domain Bet v1-like 11
TolB, N-terminal domain Tricorn protease N-terminal domain 11
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 11
Nucleotidylyl transferase tRNA-binding arm 11
PreATP-grasp domain PH0987 N-terminal domain-like 11
Glycoside hydrolase/deacetylase UraD-Like 11
CoA-dependent acyltransferases ACP-like 11
TK C-terminal domain-like Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 11
PIN domain-like Ribonuclease H-like 11
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 11
RNase III domain-like dsRNA-binding domain-like 11
TerB-like Chaperone J-domain 11
NAD(P)-binding Rossmann-fold domains MurD-like peptide ligases, catalytic domain 11
"Winged helix" DNA-binding domain Bet v1-like 11
Ribonuclease PH domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
Radical SAM enzymes RuvA domain 2-like 11
NAD(P)-binding Rossmann-fold domains Acyl-CoA N-acyltransferases (Nat) 11
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 11
Nucleic acid-binding proteins PheT/TilS domain 11
Metallo-hydrolase/oxidoreductase SCP-like 11
Sigma2 domain of RNA polymerase sigma factors NTF2-like 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 11
Dihydropteroate synthetase-like Cobalamin (vitamin B12)-binding domain 11
Translation proteins Translation proteins 11
Methyl-accepting chemotaxis protein (MCP) signaling domain PilZ domain-like 11
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 11
PheT/TilS domain Putative DNA-binding domain 11
Voltage-gated potassium channels cAMP-binding domain-like 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
FabD/lysophospholipase-like NAD(P)-binding Rossmann-fold domains 11
Homeodomain-like Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
NAD(P)-binding Rossmann-fold domains Isocitrate/Isopropylmalate dehydrogenase-like 11
Tex N-terminal region-like Ribonuclease H-like 11
Hypothetical protein SAV1430 Fe-S cluster assembly (FSCA) domain-like 11
PH0987 N-terminal domain-like Single hybrid motif 11
PPK N-terminal domain-like PHP14-like 11
RuvA domain 2-like DNA helicase RuvA subunit, C-terminal domain 11
Fe-S cluster assembly (FSCA) domain-like P-loop containing nucleoside triphosphate hydrolases 11
Homo-oligomeric flavin-containing Cys decarboxylases, HFCD CoaB-like 11
Peptidase/esterase 'gauge' domain alpha/beta-Hydrolases 11
CoA-dependent acyltransferases Acetyl-CoA synthetase-like 11
alpha-helical ferredoxin Nucleotide-binding domain 11
Eukaryotic type KH-domain (KH-domain type I) Nucleic acid-binding proteins 11
Translation proteins "Winged helix" DNA-binding domain 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
PPK N-terminal domain-like Phospholipase D/nuclease 11
Ribonuclease H-like HRDC-like 11
Carbohydrate binding domain (Trans)glycosidases 11
GAF domain-like Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 11
PheT/TilS domain Class II aaRS and biotin synthetases 11
Single hybrid motif Thiamin diphosphate-binding fold (THDP-binding) 11
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 11
N-terminal domain of MutM-like DNA repair proteins Glucocorticoid receptor-like (DNA-binding domain) 11
Nucleotidyltransferase substrate binding subunit/domain Nucleotidyltransferase substrate binding subunit/domain 11
Thiamin diphosphate-binding fold (THDP-binding) Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 11
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 11
NAD(P)-binding Rossmann-fold domains Tetrapyrrole methylase 11
PreATP-grasp domain PreATP-grasp domain 11
Nucleic acid-binding proteins Prokaryotic type KH domain (KH-domain type II) 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
Homocysteine S-methyltransferase Methionine synthase activation domain-like 11
Leukotriene A4 hydrolase N-terminal domain Metalloproteases ("zincins"), catalytic domain 11
Cryptochrome/photolyase, N-terminal domain Cryptochrome/photolyase FAD-binding domain 11
Oxidoreductase molybdopterin-binding domain E set domains 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 11
CalX-like CalX-like 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
C-terminal UvrC-binding domain of UvrB RuvA domain 2-like 11
Clc chloride channel CBS-domain pair 11
Sigma3 and sigma4 domains of RNA polymerase sigma factors NTF2-like 11
Zinc beta-ribbon P-loop containing nucleoside triphosphate hydrolases 11
alpha-helical ferredoxin Ferredoxin reductase-like, C-terminal NADP-linked domain 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
Nucleic acid-binding proteins ArfGap/RecO-like zinc finger 11
TPR-like P-loop containing nucleoside triphosphate hydrolases 11
Probable ACP-binding domain of malonyl-CoA ACP transacylase ACP-like 11
HAMP domain-like PP2C-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Adenine nucleotide alpha hydrolases-like 11
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases CarD-like 11
CalX-like Carbohydrate-binding domain 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphoenolpyruvate/pyruvate domain 11
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 11
Ferritin-like HAD-like 11
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
GIY-YIG endonuclease C-terminal UvrC-binding domain of UvrB 11
Class II aaRS and biotin synthetases GAD domain-like 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
CheY-like Ornithine decarboxylase C-terminal domain 11
Aminoacid dehydrogenase-like, N-terminal domain Isocitrate/Isopropylmalate dehydrogenase-like 11
MOP-like MOP-like 11
Thiolase-like NAD(P)-binding Rossmann-fold domains 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
Hsp33 domain HSP33 redox switch-like 11
Nucleotidylyl transferase Riboflavin kinase-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase HSP90 C-terminal domain 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
Phage tail proteins gp5 N-terminal domain-like 11
YrdC/RibB RibA-like 11
Globin-like Methyl-accepting chemotaxis protein (MCP) signaling domain 11
CO dehydrogenase molybdoprotein N-domain-like Cytochrome c 11
P-loop containing nucleoside triphosphate hydrolases ACT-like 11
Apolipoprotein A-I Apolipoprotein A-I 11
TGS-like Class II aaRS ABD-related 11
ParB/Sulfiredoxin KorB DNA-binding domain-like 11
4Fe-4S ferredoxins ADC-like 11
Dihydropteroate synthetase-like Methionine synthase activation domain-like 11
MurCD N-terminal domain MurD-like peptide ligases, peptide-binding domain 11
EF-G C-terminal domain-like Ribosomal protein S5 domain 2-like 11
6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 11
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 11
YlxR-like L30e-like 11
DNA topoisomerase I domain DNA breaking-rejoining enzymes 11
Rudiment single hybrid motif PH0987 N-terminal domain-like 11
5' to 3' exonuclease, C-terminal subdomain Ribonuclease H-like 11
alpha-helical ferredoxin Riboflavin synthase domain-like 11
CoA-dependent acyltransferases alpha/beta-Hydrolases 11
Homocysteine S-methyltransferase Dihydropteroate synthetase-like 11
Nucleic acid-binding proteins GAD domain-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheW-like 11
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 11
P-loop containing nucleoside triphosphate hydrolases Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 11
RuvA domain 2-like BRCT domain 11
Phage tail proteins Phage tail proteins 11
DNA-glycosylase Nudix 11
5' to 3' exonuclease, C-terminal subdomain DNA/RNA polymerases 11
Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Pyrimidine nucleoside phosphorylase C-terminal domain 11
Nucleotide-diphospho-sugar transferases MurD-like peptide ligases, peptide-binding domain 11
Acetyl-CoA synthetase-like Protein kinase-like (PK-like) 11
alpha/beta-Hydrolases TPR-like 11
4'-phosphopantetheinyl transferase 4'-phosphopantetheinyl transferase 11
Ferritin-like Ferritin-like 11
Thioredoxin-like Nqo1 FMN-binding domain-like 11
Tetracyclin repressor-like, C-terminal domain ALDH-like 11
NagB/RpiA/CoA transferase-like NagB/RpiA/CoA transferase-like 11
CheY-like EAL domain-like 11
Acid phosphatase/Vanadium-dependent haloperoxidase Pectin lyase-like 11
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 11
Glycosyl hydrolase domain Protein kinase-like (PK-like) 11
"Winged helix" DNA-binding domain MOP-like 11
ACP-like alpha/beta-Hydrolases 11
UDP-Glycosyltransferase/glycogen phosphorylase UDP-Glycosyltransferase/glycogen phosphorylase 11
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 11
NAD(P)-binding Rossmann-fold domains Serine metabolism enzymes domain 11
Nucleotidyltransferase substrate binding subunit/domain ACT-like 11
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Carbohydrate-binding domain (Trans)glycosidases 11
Macro domain-like Zn-dependent exopeptidases 11
Adenine nucleotide alpha hydrolases-like GAF domain-like 11
Probable ACP-binding domain of malonyl-CoA ACP transacylase GroES-like 11
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
Metalloproteases ("zincins"), catalytic domain beta-Roll 11
FAD-binding/transporter-associated domain-like Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain 11
YhbC-like, N-terminal domain YhbC-like, C-terminal domain 11
MurCD N-terminal domain MurD-like peptide ligases, catalytic domain 11
CheY-like Methylesterase CheB, C-terminal domain 11
TGS-like Class II aaRS and biotin synthetases 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
GAF domain-like CheY-like 11
Riboflavin synthase domain-like Riboflavin synthase domain-like 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
S13-like H2TH domain Glucocorticoid receptor-like (DNA-binding domain) 11
FabD/lysophospholipase-like ACP-like 11
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 11
Histidine-containing phosphotransfer domain, HPT domain CheW-like 11
Cyclophilin-like Cyclophilin-like 11
FAD/NAD(P)-binding domain HI0933 insert domain-like 11
Alpha-L RNA-binding motif S-adenosyl-L-methionine-dependent methyltransferases 11
N-terminal domain of bifunctional PutA protein ALDH-like 11
PGBD-like PGBD-like 11
Chemotaxis receptor methyltransferase CheR, N-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 11
Putative DNA-binding domain Anticodon-binding domain of PheRS 11
P-loop containing nucleoside triphosphate hydrolases Restriction endonuclease-like 11
Transcription factor NusA, N-terminal domain Nucleic acid-binding proteins 11
Serine metabolism enzymes domain ACT-like 11
P-loop containing nucleoside triphosphate hydrolases C-terminal UvrC-binding domain of UvrB 11
Single hybrid motif alpha/beta-Hydrolases 11
Ribosomal protein L6 Ribosomal protein L6 11
Glutathione synthetase ATP-binding domain-like Acyl-CoA N-acyltransferases (Nat) 11
Glucocorticoid receptor-like (DNA-binding domain) P-loop containing nucleoside triphosphate hydrolases 11
HRDC-like HRDC-like 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
Rudiment single hybrid motif Cyclophilin-like 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
Ribokinase-like Nucleotidylyl transferase 11
N-acetylmuramoyl-L-alanine amidase-like PGBD-like 11
SCP-like Riboflavin synthase domain-like 11
Cytochrome P450 Ferredoxin reductase-like, C-terminal NADP-linked domain 11
Prokaryotic type I DNA topoisomerase Zinc beta-ribbon 11
Transcription factor NusA, N-terminal domain Rad51 N-terminal domain-like 11
FAD-linked oxidoreductase ALDH-like 11
Ribosomal protein S5 domain 2-like HSP90 C-terminal domain 11
Acetyl-CoA synthetase-like ACP-like 11
PHP domain-like AF1531-like 11
Fic-like "Winged helix" DNA-binding domain 11
4Fe-4S ferredoxins Iron-sulfur subunit of formate dehydrogenase N, transmembrane anchor 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
Methionine synthase domain Cobalamin (vitamin B12)-binding domain 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase PP2C-like 11
all-alpha NTP pyrophosphatases all-alpha NTP pyrophosphatases 11
Thioredoxin-like TPR-like 11
NAD(P)-binding Rossmann-fold domains ACP-like 11
Homeodomain-like Methylated DNA-protein cysteine methyltransferase domain 11
Rhodanese/Cell cycle control phosphatase Ankyrin repeat 11
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
CheW-like CheW-like 11
NagB/RpiA/CoA transferase-like D-ribose-5-phosphate isomerase (RpiA), lid domain 11
FAD-linked reductases, C-terminal domain 4Fe-4S ferredoxins 11
MFS general substrate transporter MFS general substrate transporter 11
HD-domain/PDEase-like HD-domain/PDEase-like 11
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 11
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 11
Penicillin binding protein dimerisation domain beta-lactamase/transpeptidase-like 11
Sensory domain-like Nucleotide cyclase 11
Dimeric alpha+beta barrel Dimeric alpha+beta barrel 11
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 11
Nqo5-like HydB/Nqo4-like 11
Formyltransferase Arabinanase/levansucrase/invertase 11
Transmembrane di-heme cytochromes a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 11
Glutathione synthetase ATP-binding domain-like Phosphoenolpyruvate/pyruvate domain 11
Glutathione synthetase ATP-binding domain-like Cyclophilin-like 11
SCP-like Ferredoxin reductase-like, C-terminal NADP-linked domain 11
Ribosomal protein S5 domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
Formyltransferase FMT C-terminal domain-like 11
Methionine synthase domain Methionine synthase activation domain-like 11
Translation proteins Initiation factor IF2/eIF5b, domain 3 11
Sensory domain-like Methyl-accepting chemotaxis protein (MCP) signaling domain 11
lambda repressor-like DNA-binding domains Cyanase C-terminal domain 11
CheY-like PLP-dependent transferases 11
FAD/NAD(P)-binding domain 4Fe-4S ferredoxins 11
RuvA domain 2-like RuvA domain 2-like 11
Single hybrid motif TK C-terminal domain-like 11
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 11
GIY-YIG endonuclease RuvA domain 2-like 11
Rho N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
GAF domain-like Phosphohistidine domain 11
alpha/beta-Hydrolases Galactose-binding domain-like 11
dUTPase-like dUTPase-like 11
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 11
Dihydropteroate synthetase-like Methionine synthase domain 11
CO dehydrogenase ISP C-domain like CO dehydrogenase molybdoprotein N-domain-like 11
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 11
Carbohydrate-binding domain Carbohydrate-binding domain 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain ACT-like 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases TGS-like 11
TPR-like S-adenosyl-L-methionine-dependent methyltransferases 11
Thioredoxin-like Six-hairpin glycosidases 11
P-loop containing nucleoside triphosphate hydrolases Pyrimidine nucleoside phosphorylase C-terminal domain 11
"Winged helix" DNA-binding domain LexA/Signal peptidase 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
FMN-dependent nitroreductase-like FMN-dependent nitroreductase-like 11
Nucleotide-diphospho-sugar transferases RmlC-like cupins 11
Cobalamin (vitamin B12)-binding domain Methionine synthase activation domain-like 11
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 11
P-loop containing nucleoside triphosphate hydrolases Adenine nucleotide alpha hydrolases-like 11
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
Xylose isomerase-like Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 11
Ferredoxin reductase-like, C-terminal NADP-linked domain PYP-like sensor domain (PAS domain) 11
Molybdenum cofactor biosynthesis proteins MoeA C-terminal domain-like 11
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 11
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
Bacterial muramidases Lysozyme-like 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
GroES-like GroES-like 11
Homocysteine S-methyltransferase Methionine synthase domain 11
Putative DNA-binding domain Ribonuclease H-like 11
alpha/beta-Hydrolases TerB-like 11
Sigma3 and sigma4 domains of RNA polymerase sigma factors CheY-like 11
Trigger factor ribosome-binding domain FKBP-like 11
Nucleic acid-binding proteins Rad51 N-terminal domain-like 11
P-loop containing nucleoside triphosphate hydrolases Smc hinge domain 11
Protein kinase-like (PK-like) LanC-like 11
CarD-like TRCF domain-like 11
Carbamate kinase-like ACT-like 11
Aconitase iron-sulfur domain LeuD/IlvD-like 11
CheY-like PP2C-like 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
Ferritin-like Calcium ATPase, transduction domain A 11
Succinyl-CoA synthetase domains Succinyl-CoA synthetase domains 11
Protease propeptides/inhibitors Subtilisin-like 11
RBP11-like subunits of RNA polymerase C-terminal domain of RNA polymerase alpha subunit 11
P-loop containing nucleoside triphosphate hydrolases HRDC-like 11
TTHA1013/TTHA0281-like Ribbon-helix-helix 11
Prokaryotic type KH domain (KH-domain type II) Rad51 N-terminal domain-like 11
lambda integrase-like, N-terminal domain DNA breaking-rejoining enzymes 11
NAD(P)-binding Rossmann-fold domains MurD-like peptide ligases, peptide-binding domain 11
Nucleotide-binding domain Nucleotide-binding domain 11
Adenine nucleotide alpha hydrolases-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Nucleotidyltransferase TGS-like 11
MetI-like P-loop containing nucleoside triphosphate hydrolases 11
CheW-like CheY-like 11
Poly A polymerase C-terminal region-like ACT-like 11
Rho N-terminal domain-like Nucleic acid-binding proteins 11
DNA primase core P-loop containing nucleoside triphosphate hydrolases 11
Actin-like ATPase domain HD-domain/PDEase-like 11
Prokaryotic type KH domain (KH-domain type II) Prokaryotic type KH domain (KH-domain type II) 11
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain "Winged helix" DNA-binding domain 11
2Fe-2S ferredoxin-like ADC-like 11
Carbon-nitrogen hydrolase Carbon-nitrogen hydrolase 11
Methylated DNA-protein cysteine methyltransferase domain Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
Transcription factor NusA, N-terminal domain Prokaryotic type KH domain (KH-domain type II) 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
TGS-like ACT-like 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 11
PreATP-grasp domain Methylglyoxal synthase-like 11
Siroheme synthase middle domains-like Tetrapyrrole methylase 11
Nucleotidyltransferase substrate binding subunit/domain Poly A polymerase C-terminal region-like 11
FMN-linked oxidoreductases Alpha subunit of glutamate synthase, C-terminal domain 11
Succinyl-CoA synthetase domains Acyl-CoA N-acyltransferases (Nat) 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
Tex N-terminal region-like Nucleic acid-binding proteins 11
NAD(P)-binding Rossmann-fold domains Glutathione synthetase ATP-binding domain-like 11
RuBisCO, large subunit, small (N-terminal) domain RuBisCo, C-terminal domain 11
GroES-like ACP-like 11
gp5 N-terminal domain-like Phage fibre proteins 11
beta-Barrel protease inhibitors beta-Barrel protease inhibitors 11
Carbon-nitrogen hydrolase Adenine nucleotide alpha hydrolases-like 11
Homeodomain-like ALDH-like 11
CoA-dependent acyltransferases CoA-dependent acyltransferases 11
Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases 11
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 11
Thiolase-like FabD/lysophospholipase-like 11
CO dehydrogenase ISP C-domain like Molybdenum cofactor-binding domain 11
2Fe-2S ferredoxin-like CO dehydrogenase molybdoprotein N-domain-like 11
2Fe-2S ferredoxin-like Molybdenum cofactor-binding domain 11
PIN domain-like DNA/RNA polymerases 11
vWA-like TPR-like 11
Molybdenum cofactor-binding domain Cytochrome c 11
Ribonuclease H-like Nucleic acid-binding proteins 11
Radical SAM enzymes Nitrogenase accessory factor-like 11
HD-domain/PDEase-like TGS-like 11
Homodimeric domain of signal transducing histidine kinase CheW-like 11
alpha-helical ferredoxin SCP-like 11
PYP-like sensor domain (PAS domain) Homeodomain-like 11
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Pyrimidine nucleoside phosphorylase C-terminal domain 11
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 11
CalX-like (Trans)glycosidases 11
Cytochrome P450 Riboflavin synthase domain-like 11
HAMP domain-like Nucleotide cyclase 11
Elongation factor Ts (EF-Ts), dimerisation domain Elongation factor Ts (EF-Ts), dimerisation domain 11
Periplasmic binding protein-like II MetI-like 11
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 11

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