SUPERFAMILY 1.75 HMM library and genome assignments server

Domain combination pairs in Bacillus pumilus SAFR-032

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

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Adjacent domain pairs graph

Graph of adjacent domain pairs.


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Domain combination pairs

681 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 2912
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 195
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 189
"Winged helix" DNA-binding domain Periplasmic binding protein-like II 151
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 152
Actin-like ATPase domain Actin-like ATPase domain 144
CheY-like C-terminal effector domain of the bipartite response regulators 131
Homeodomain-like Tetracyclin repressor-like, C-terminal domain 122
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 124
PTS-regulatory domain, PRD PTS-regulatory domain, PRD 114
lambda repressor-like DNA-binding domains Periplasmic binding protein-like I 101
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 102
GroES-like NAD(P)-binding Rossmann-fold domains 92
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 92
CoA-dependent acyltransferases ACP-like 87
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 81
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 86
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 85
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 75
Homeodomain-like SIS domain 71
Sensory domain-like Methyl-accepting chemotaxis protein (MCP) signaling domain 73
CoA-dependent acyltransferases Acetyl-CoA synthetase-like 76
Homeodomain-like Homeodomain-like 76
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 73
Acetyl-CoA synthetase-like ACP-like 76
CoA-dependent acyltransferases CoA-dependent acyltransferases 76
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 66
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 61
SacY-like RNA-binding domain PTS-regulatory domain, PRD 61
HAMP domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 63
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 62
Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase C-terminal domain-like 62
Phoshotransferase/anion transport protein PTS system IIB component-like 64
ACP-like ACP-like 65
Penicillin binding protein dimerisation domain beta-lactamase/transpeptidase-like 64
NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains 55
Glucose permease domain IIB Duplicated hybrid motif 52
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 54
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 54
Single hybrid motif Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 52
Single hybrid motif CoA-dependent acyltransferases 52
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 51
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 52
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex CoA-dependent acyltransferases 52
Thiolase-like Thiolase-like 52
Composite domain of metallo-dependent hydrolases Metallo-dependent hydrolases 53
PTS-regulatory domain, PRD Phoshotransferase/anion transport protein 53
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 52
"Winged helix" DNA-binding domain Chorismate lyase-like 51
PreATP-grasp domain Rudiment single hybrid motif 52
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 51
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 53
HAMP domain-like Homodimeric domain of signal transducing histidine kinase 52
P-loop containing nucleoside triphosphate hydrolases Translation proteins 54
PTS-regulatory domain, PRD PTS system IIB component-like 53
Class II aaRS and biotin synthetases Class II aaRS ABD-related 54
ACP-like NAD(P)-binding Rossmann-fold domains 44
Lysozyme-like beta-lactamase/transpeptidase-like 43
"Winged helix" DNA-binding domain PLP-dependent transferases 41
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 44
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 43
"Winged helix" DNA-binding domain Dimeric alpha+beta barrel 41
Calcium ATPase, transduction domain A HAD-like 44
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein S5 domain 2-like 44
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 44
PDZ domain-like Trypsin-like serine proteases 42
Acetyl-CoA synthetase-like Acetyl-CoA synthetase-like 43
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 41
Sensory domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 43
ACT-like ACT-like 42
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 43
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 44
HAD-like Calcium ATPase, transmembrane domain M 44
Phospholipase D/nuclease Phospholipase D/nuclease 42
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 42
PYP-like sensor domain (PAS domain) PYP-like sensor domain (PAS domain) 44
Aminopeptidase/glucanase lid domain Zn-dependent exopeptidases 31
Thiolase-like ACP-like 33
"Winged helix" DNA-binding domain PTS-regulatory domain, PRD 32
Triger factor/SurA peptide-binding domain-like FKBP-like 32
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 32
(Trans)glycosidases Glycosyl hydrolase domain 31
EF-G C-terminal domain-like EF-G C-terminal domain-like 32
Thiolase-like FabD/lysophospholipase-like 33
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 31
CBS-domain pair FAD-binding/transporter-associated domain-like 31
PYP-like sensor domain (PAS domain) P-loop containing nucleoside triphosphate hydrolases 32
LysM domain LysM domain 33
Enolase N-terminal domain-like Enolase C-terminal domain-like 31
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 32
PYP-like sensor domain (PAS domain) Homeodomain-like 32
Regulatory protein AraC Homeodomain-like 32
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 32
Class II aaRS and biotin synthetases ThrRS/AlaRS common domain 32
PLP-binding barrel Alanine racemase C-terminal domain-like 32
Sporulation response regulatory protein Spo0B ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 32
Class I glutamine amidotransferase-like LD-carboxypeptidase A C-terminal domain-like 31
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 33
Metallo-dependent phosphatases 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain 33
Nucleic acid-binding proteins RuvA domain 2-like 33
PurM N-terminal domain-like PurM C-terminal domain-like 32
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 32
"Winged helix" DNA-binding domain Phoshotransferase/anion transport protein 32
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 32
"Winged helix" DNA-binding domain PTS system IIB component-like 32
Translation proteins EF-G C-terminal domain-like 32
Carbamate kinase-like ACT-like 31
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 33
FabD/lysophospholipase-like ACP-like 33
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 33
Alpha-L RNA-binding motif Pseudouridine synthase 31
NAD(P)-binding Rossmann-fold domains ACT-like 33
ACP-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 33
Sensory domain-like Sporulation response regulatory protein Spo0B 32
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 31
Thiolase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 33
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 32
"Winged helix" DNA-binding domain NagB/RpiA/CoA transferase-like 31
Nucleic acid-binding proteins Nucleic acid-binding proteins 33
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 22
NAD(P)-binding Rossmann-fold domains CoA-dependent acyltransferases 22
Serine metabolism enzymes domain ACT-like 22
ThrRS/AlaRS common domain Class II aaRS ABD-related 21
P-loop containing nucleoside triphosphate hydrolases MOP-like 21
Penicillin binding protein dimerisation domain Penicillin-binding protein 2x (pbp-2x), c-terminal domain 22
beta-lactamase/transpeptidase-like Penicillin-binding protein 2x (pbp-2x), c-terminal domain 22
TGS-like ThrRS/AlaRS common domain 21
NAD(P)-binding Rossmann-fold domains UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 21
Acetyl-CoA synthetase-like alpha/beta-Hydrolases 22
GAF domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 22
ClpP/crotonase ClpP/crotonase 21
NAD(P)-binding Rossmann-fold domains TrkA C-terminal domain-like 22
PYP-like sensor domain (PAS domain) Nucleotide cyclase 22
Ribonuclease H-like Nucleic acid-binding proteins 22
tRNA-binding arm Class II aaRS and biotin synthetases 21
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 22
HAMP domain-like PYP-like sensor domain (PAS domain) 21
Methylated DNA-protein cysteine methyltransferase domain Methylated DNA-protein cysteine methyltransferase, C-terminal domain 22
PDZ domain-like ClpP/crotonase 21
CheC-like Surface presentation of antigens (SPOA) 22
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 22
MurCD N-terminal domain MurD-like peptide ligases, catalytic domain 21
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 22
Nucleic acid-binding proteins Translation proteins SH3-like domain 22
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 22
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB transmembrane domain 22
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 21
NAD(P)-binding Rossmann-fold domains alpha/beta-Hydrolases 22
HMA, heavy metal-associated domain HAD-like 22
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 21
FabD/lysophospholipase-like NAD(P)-binding Rossmann-fold domains 22
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 22
"Winged helix" DNA-binding domain CBS-domain pair 22
CoA-dependent acyltransferases alpha/beta-Hydrolases 22
PreATP-grasp domain PreATP-grasp domain 22
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 21
TGS-like Class II aaRS ABD-related 21
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 22
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 22
"Winged helix" DNA-binding domain GAF domain-like 21
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 22
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 21
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 22
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB transmembrane domain 22
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 21
TGS-like Class II aaRS and biotin synthetases 21
Aspartate/glutamate racemase Aspartate/glutamate racemase 21
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 22
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 21
P-loop containing nucleoside triphosphate hydrolases CBS-domain pair 21
P-loop containing nucleoside triphosphate hydrolases Glucocorticoid receptor-like (DNA-binding domain) 22
Aldolase post-HMGL domain-like 22
6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 21
L30e-like alpha/beta knot 21
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 22
Cytochrome c oxidase subunit II-like, transmembrane region Cupredoxins 22
Thiolase-like NAD(P)-binding Rossmann-fold domains 22
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 21
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Adenine nucleotide alpha hydrolases-like 21
Cytidine deaminase-like Dihydrofolate reductase-like 21
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 22
PDZ domain-like PGBD-like 21
CheY-like "Winged helix" DNA-binding domain 21
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 22
Sm-like ribonucleoproteins Mechanosensitive channel protein MscS (YggB), C-terminal domain 22
PYP-like sensor domain (PAS domain) SpoIIaa-like 21
Flavoproteins Riboflavin synthase domain-like 22
Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), C-terminal domain 22
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 21
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 21
ParB/Sulfiredoxin KorB DNA-binding domain-like 21
EF-G C-terminal domain-like Ribosomal protein S5 domain 2-like 22
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 22
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 22
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 22
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 21
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 21
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 22
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
Flavoproteins Ferredoxin reductase-like, C-terminal NADP-linked domain 22
DnaK suppressor protein DksA, alpha-hairpin domain Glucocorticoid receptor-like (DNA-binding domain) 22
ACP-like alpha/beta-Hydrolases 22
Formate dehydrogenase/DMSO reductase, domains 1-3 ADC-like 21
MalF N-terminal region-like MetI-like 22
Arabinanase/levansucrase/invertase Concanavalin A-like lectins/glucanases 21
"Winged helix" DNA-binding domain GntR ligand-binding domain-like 21
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 22
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 21
MurCD N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 21
Protease propeptides/inhibitors Subtilisin-like 21
TPR-like TPR-like 22
ClpP/crotonase PGBD-like 21
PYP-like sensor domain (PAS domain) Methyl-accepting chemotaxis protein (MCP) signaling domain 22
Carbamate kinase-like PUA domain-like 21
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 21
PLP-dependent transferases Ornithine decarboxylase C-terminal domain 21
Putative DNA-binding domain Probable bacterial effector-binding domain 21
HAD-like Acyl-CoA N-acyltransferases (Nat) 22
Acetyl-CoA synthetase-like NAD(P)-binding Rossmann-fold domains 22
beta-lactamase/transpeptidase-like Penicillin-binding protein associated domain 22
Nucleic acid-binding proteins S-adenosyl-L-methionine-dependent methyltransferases 21
Probable ACP-binding domain of malonyl-CoA ACP transacylase NAD(P)-binding Rossmann-fold domains 22
GroEL-intermediate domain like GroEL apical domain-like 11
Nucleic acid-binding proteins ArfGap/RecO-like zinc finger 11
Elongation factor Ts (EF-Ts), dimerisation domain Elongation factor Ts (EF-Ts), dimerisation domain 11
Sigma3 and sigma4 domains of RNA polymerase sigma factors NagB/RpiA/CoA transferase-like 11
PHP domain-like RuvA domain 2-like 11
Cysteine proteinases Cysteine proteinases 11
Prokaryotic SH3-related domain Prokaryotic SH3-related domain 11
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
PheT/TilS domain Class II aaRS and biotin synthetases 11
"Winged helix" DNA-binding domain LexA/Signal peptidase 11
Homocysteine S-methyltransferase Cobalamin (vitamin B12)-binding domain 11
Nucleic acid-binding proteins DNA helicase RuvA subunit, C-terminal domain 11
post-HMGL domain-like Single hybrid motif 11
MesJ substrate recognition domain-like PheT/TilS domain 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 11
Cupredoxins Cytochrome c 11
4Fe-4S ferredoxins ARM repeat 11
lambda repressor-like DNA-binding domains RmlC-like cupins 11
Ribosomal protein L6 Ribosomal protein L6 11
YajQ-like YajQ-like 11
LysM domain (Trans)glycosidases 11
GIY-YIG endonuclease C-terminal UvrC-binding domain of UvrB 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 11
Nitrite and sulphite reductase 4Fe-4S domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
ACP-like Acyl-CoA N-acyltransferases (Nat) 11
PheT/TilS domain Anticodon-binding domain of PheRS 11
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 11
ACT-like Formyltransferase 11
ACP-like HAD-like 11
Macro domain-like Zn-dependent exopeptidases 11
Sensory domain-like Homodimeric domain of signal transducing histidine kinase 11
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 11
Methylesterase CheB, C-terminal domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Glutathione synthetase ATP-binding domain-like post-HMGL domain-like 11
CheY-binding domain of CheA ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
S13-like H2TH domain Glucocorticoid receptor-like (DNA-binding domain) 11
Homocysteine S-methyltransferase Dihydropteroate synthetase-like 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
P-loop containing nucleoside triphosphate hydrolases ACT-like 11
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 11
Alpha-L RNA-binding motif S-adenosyl-L-methionine-dependent methyltransferases 11
DNA-glycosylase Nudix 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Nucleic acid-binding proteins 11
PreATP-grasp domain post-HMGL domain-like 11
Methylesterase CheB, C-terminal domain PYP-like sensor domain (PAS domain) 11
RBP11-like subunits of RNA polymerase C-terminal domain of RNA polymerase alpha subunit 11
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 11
lambda repressor-like DNA-binding domains TPR-like 11
PUA domain-like alpha/beta knot 11
Chaperone J-domain HSP40/DnaJ peptide-binding domain 11
Zn-dependent exopeptidases Sporulation related repeat 11
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 11
Chemotaxis receptor methyltransferase CheR, N-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 11
"Winged helix" DNA-binding domain Class II aaRS and biotin synthetases 11
P-loop containing nucleoside triphosphate hydrolases TrpR-like 11
Cobalamin (vitamin B12)-binding domain Methionine synthase activation domain-like 11
RuvA domain 2-like RuvA domain 2-like 11
Glycoside hydrolase/deacetylase Families 57/38 glycoside transferase middle domain 11
Nucleic acid-binding proteins PheT/TilS domain 11
P-loop containing nucleoside triphosphate hydrolases C-terminal UvrC-binding domain of UvrB 11
"Winged helix" DNA-binding domain C-terminal domain of transcriptional repressors 11
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain ACT-like 11
Rudiment single hybrid motif Aldolase 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphohistidine domain 11
vWA-like vWA-like 11
Formate/glycerate dehydrogenase catalytic domain-like Serine metabolism enzymes domain 11
Eukaryotic type KH-domain (KH-domain type I) HD-domain/PDEase-like 11
S-adenosyl-L-methionine-dependent methyltransferases ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Rudiment single hybrid motif Single hybrid motif 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
Zinc beta-ribbon N-terminal domain of DnaB helicase 11
UDP-Glycosyltransferase/glycogen phosphorylase UDP-Glycosyltransferase/glycogen phosphorylase 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 11
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 11
Aldolase Single hybrid motif 11
Homo-oligomeric flavin-containing Cys decarboxylases, HFCD CoaB-like 11
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 11
S-adenosyl-L-methionine-dependent methyltransferases PYP-like sensor domain (PAS domain) 11
Dihydropteroate synthetase-like Methionine synthase domain 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 11
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 11
Cytochrome P450 Riboflavin synthase domain-like 11
Homocysteine S-methyltransferase Methionine synthase domain 11
Glutamyl tRNA-reductase catalytic, N-terminal domain Glutamyl tRNA-reductase dimerization domain 11
EAL domain-like HD-domain/PDEase-like 11
S-adenosyl-L-methionine-dependent methyltransferases S-adenosyl-L-methionine-dependent methyltransferases 11
HD-domain/PDEase-like ACT-like 11
N-terminal domain of DnaB helicase P-loop containing nucleoside triphosphate hydrolases 11
Molybdenum cofactor biosynthesis proteins MoeA C-terminal domain-like 11
GAF domain-like SpoIIaa-like 11
lambda repressor-like DNA-binding domains SinR repressor dimerisation domain-like 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 11
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 11
TGS-like ACT-like 11
PA domain Subtilisin-like 11
Ribonuclease H-like DNA/RNA polymerases 11
"Winged helix" DNA-binding domain PRTase-like 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
Nitrite/Sulfite reductase N-terminal domain-like Nitrite/Sulfite reductase N-terminal domain-like 11
PheT/TilS domain Putative DNA-binding domain 11
P-loop containing nucleoside triphosphate hydrolases Obg GTP-binding protein C-terminal domain 11
"Winged helix" DNA-binding domain HprK N-terminal domain-like 11
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
Prokaryotic type I DNA topoisomerase Zinc beta-ribbon 11
Nucleotidylyl transferase Riboflavin kinase-like 11
Nucleic acid-binding proteins Anticodon-binding domain of PheRS 11
DNA polymerase beta, N-terminal domain-like PHP domain-like 11
Glutamine synthetase/guanido kinase GatB/YqeY motif 11
"Winged helix" DNA-binding domain Thioesterase/thiol ester dehydrase-isomerase 11
CBS-domain pair Thioesterase/thiol ester dehydrase-isomerase 11
C-terminal UvrC-binding domain of UvrB RuvA domain 2-like 11
Trigger factor ribosome-binding domain FKBP-like 11
HMA, heavy metal-associated domain HMA, heavy metal-associated domain 11
CoA-dependent acyltransferases Acyl-CoA N-acyltransferases (Nat) 11
DNA ligase/mRNA capping enzyme, catalytic domain RuvA domain 2-like 11
FucI/AraA N-terminal and middle domains FucI/AraA C-terminal domain-like 11
Acyl-CoA N-acyltransferases (Nat) Nucleotidyltransferase 11
Homodimeric domain of signal transducing histidine kinase CheW-like 11
Metal cation-transporting ATPase, ATP-binding domain N Calcium ATPase, transmembrane domain M 11
PYP-like sensor domain (PAS domain) Sporulation response regulatory protein Spo0B 11
PK beta-barrel domain-like Phosphohistidine domain 11
Histidine-containing phosphotransfer domain, HPT domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
LysM domain PGBD-like 11
RNase III domain-like dsRNA-binding domain-like 11
Putative DNA-binding domain Anticodon-binding domain of PheRS 11
DNA clamp DNA clamp 11
NTF2-like beta-lactamase/transpeptidase-like 11
Formyltransferase FMT C-terminal domain-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
Hedgehog/DD-peptidase PGBD-like 11
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 11
CheY-binding domain of CheA Homodimeric domain of signal transducing histidine kinase 11
LysM domain Cysteine proteinases 11
Cytochrome P450 Ferredoxin reductase-like, C-terminal NADP-linked domain 11
Thiolase-like HAD-like 11
beta-lactamase/transpeptidase-like Fibronectin type III 11
Aldolase AFP III-like domain 11
Nucleotide-binding domain ISP domain 11
Bacterial adhesins Bacterial adhesins 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FMN-linked oxidoreductases 11
4'-phosphopantetheinyl transferase 4'-phosphopantetheinyl transferase 11
Carboxypeptidase regulatory domain-like Carboxypeptidase regulatory domain-like 11
2Fe-2S ferredoxin-like alpha-helical ferredoxin 11
DNA polymerase beta, N-terminal domain-like Nucleotidyltransferase 11
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
RuvA domain 2-like BRCT domain 11
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 11
Adenine nucleotide alpha hydrolases-like PheT/TilS domain 11
GAF domain-like P-loop containing nucleoside triphosphate hydrolases 11
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 11
HD-domain/PDEase-like TGS-like 11
PK C-terminal domain-like Phosphohistidine domain 11
PilZ domain-like PilZ domain-like 11
Staphylococcal nuclease Metallo-dependent phosphatases 11
Subtilisin-like Carboxypeptidase regulatory domain-like 11
Nucleotide-diphospho-sugar transferases TPR-like 11
Class II aaRS and biotin synthetases GAD domain-like 11
post-HMGL domain-like 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 11
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
Metal cation-transporting ATPase, ATP-binding domain N HAD-like 11
Thioredoxin-like Six-hairpin glycosidases 11
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 11
Translation proteins Translation proteins 11
Bacterial adhesins Cna protein B-type domain 11
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 11
HprK N-terminal domain-like Thioesterase/thiol ester dehydrase-isomerase 11
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) Methylated DNA-protein cysteine methyltransferase domain 11
Aconitase iron-sulfur domain LeuD/IlvD-like 11
Oligoxyloglucan reducing end-specific cellobiohydrolase Nitrous oxide reductase, N-terminal domain 11
Lysozyme-like Fibronectin type III 11
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Pyrimidine nucleoside phosphorylase C-terminal domain 11
Arabinanase/levansucrase/invertase Galactose-binding domain-like 11
HD-domain/PDEase-like Nucleotidyltransferase 11
UROD/MetE-like UROD/MetE-like 11
Terpenoid cyclases/Protein prenyltransferases Terpenoid cyclases/Protein prenyltransferases 11
6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 11
RuvA domain 2-like JAB1/MPN domain 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
FabD/lysophospholipase-like HAD-like 11
GAF domain-like Homeodomain-like 11
MoeA N-terminal region -like Molybdenum cofactor biosynthesis proteins 11
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
Sensory domain-like PYP-like sensor domain (PAS domain) 11
Nucleotidyltransferase Poly A polymerase C-terminal region-like 11
(Trans)glycosidases Beta-D-glucan exohydrolase, C-terminal domain 11
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 11
Homocysteine S-methyltransferase Methionine synthase activation domain-like 11
Methylesterase CheB, C-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 11
Periplasmic binding protein-like II Periplasmic binding protein-like II 11
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Homeodomain-like "Helical backbone" metal receptor 11
Tex N-terminal region-like Nucleic acid-binding proteins 11
MgtE N-terminal domain-like CBS-domain pair 11
Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Pyrimidine nucleoside phosphorylase C-terminal domain 11
RuvA domain 2-like DNA helicase RuvA subunit, C-terminal domain 11
Prokaryotic type KH domain (KH-domain type II) Prokaryotic type KH domain (KH-domain type II) 11
Thiolase-like CoA-dependent acyltransferases 11
P-loop containing nucleoside triphosphate hydrolases SMR domain-like 11
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 11
MFS general substrate transporter ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
"Winged helix" DNA-binding domain DnaD domain-like 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
Dihydropteroate synthetase-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
Dihydropteroate synthetase-like Methionine synthase activation domain-like 11
GroES-like GroES-like 11
Class II aaRS and biotin synthetases C-terminal domain of transcriptional repressors 11
CarD-like TRCF domain-like 11
Zinc beta-ribbon Prokaryotic SH3-related domain 11
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 11
"Winged helix" DNA-binding domain Putative transcriptional regulator TM1602, C-terminal domain 11
HprK N-terminal domain-like CBS-domain pair 11
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 11
CoA-dependent acyltransferases HAD-like 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
GroEL equatorial domain-like GroEL apical domain-like 11
PUA domain-like Nucleotidylyl transferase 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
Staphylococcal nuclease 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain 11
PreATP-grasp domain Single hybrid motif 11
cAMP-binding domain-like "Winged helix" DNA-binding domain 11
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 11
Homeodomain-like Probable bacterial effector-binding domain 11
DNA repair protein MutS, domain III SMR domain-like 11
Class II aaRS and biotin synthetases YbaK/ProRS associated domain 11
THUMP domain-like Adenine nucleotide alpha hydrolases-like 11
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
Periplasmic binding protein-like II ACT-like 11
PH0987 N-terminal domain-like Cyclophilin-like 11
Pectin lyase-like Pectin lyase-like 11
Voltage-gated potassium channels NAD(P)-binding Rossmann-fold domains 11
Tex N-terminal region-like Ribonuclease H-like 11
FAD-binding/transporter-associated domain-like Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain 11
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 11
Class II aaRS and biotin synthetases Translation proteins 11
PreATP-grasp domain Methylglyoxal synthase-like 11
NAD(P)-binding Rossmann-fold domains P-loop containing nucleoside triphosphate hydrolases 11
NAD(P)-binding Rossmann-fold domains Homeodomain-like 11
lambda integrase-like, N-terminal domain DNA breaking-rejoining enzymes 11
Adenine nucleotide alpha hydrolases-like MesJ substrate recognition domain-like 11
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 11
alpha-helical ferredoxin Nucleotide-binding domain 11
Nucleic acid-binding proteins Putative DNA-binding domain 11
Glutathione synthetase ATP-binding domain-like Succinyl-CoA synthetase domains 11
DPP6 N-terminal domain-like alpha/beta-Hydrolases 11
L9 N-domain-like Ribosomal protein L9 C-domain 11
UDP-Glycosyltransferase/glycogen phosphorylase Prokaryotic SH3-related domain 11
Molybdenum cofactor biosynthesis proteins CinA-like 11
Nucleotide-diphospho-sugar transferases S-adenosyl-L-methionine-dependent methyltransferases 11
all-alpha NTP pyrophosphatases all-alpha NTP pyrophosphatases 11
GAF domain-like C-terminal effector domain of the bipartite response regulators 11
Transcription factor NusA, N-terminal domain Prokaryotic type KH domain (KH-domain type II) 11
Zinc beta-ribbon DNA primase core 11
Class II aaRS and biotin synthetases SufE/NifU 11
Probable ACP-binding domain of malonyl-CoA ACP transacylase CoA-dependent acyltransferases 11
Folate-binding domain Aminomethyltransferase beta-barrel domain 11
Glutathione synthetase ATP-binding domain-like Aldolase 11
Probable ACP-binding domain of malonyl-CoA ACP transacylase Acyl-CoA N-acyltransferases (Nat) 11
Bacterial fluorinating enzyme, N-terminal domain Bacterial fluorinating enzyme, C-terminal domain 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
N-acetylmuramoyl-L-alanine amidase-like LysM domain 11
CheW-like CheY-like 11
Multidrug efflux transporter AcrB transmembrane domain Methyl-accepting chemotaxis protein (MCP) signaling domain 11
Nucleotidyltransferase TGS-like 11
DNA primase core N-terminal domain of DnaB helicase 11
P-loop containing nucleoside triphosphate hydrolases CarD-like 11
"Winged helix" DNA-binding domain HRDC-like 11
Tex N-terminal region-like RuvA domain 2-like 11
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheW-like 11
PIN domain-like Ribonuclease H-like 11
P-loop containing nucleoside triphosphate hydrolases HRDC-like 11
FabD/lysophospholipase-like CoA-dependent acyltransferases 11
FliG FliG 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
MgtE N-terminal domain-like MgtE membrane domain-like 11
FabD/lysophospholipase-like FabD/lysophospholipase-like 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
NAD(P)-binding Rossmann-fold domains Serine metabolism enzymes domain 11
Rhodanese/Cell cycle control phosphatase Metallo-hydrolase/oxidoreductase 11
Ribonuclease H-like RuvA domain 2-like 11
Adenine nucleotide alpha hydrolases-like DHS-like NAD/FAD-binding domain 11
Eukaryotic type KH-domain (KH-domain type I) Nucleic acid-binding proteins 11
LysM domain Barwin-like endoglucanases 11
Methylglyoxal synthase-like Cytidine deaminase-like 11
S-adenosyl-L-methionine-dependent methyltransferases Homodimeric domain of signal transducing histidine kinase 11
5' to 3' exonuclease, C-terminal subdomain Ribonuclease H-like 11
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 11
Homocysteine S-methyltransferase FAD-linked oxidoreductase 11
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 11
"Winged helix" DNA-binding domain NAD(P)-binding Rossmann-fold domains 11
Calcium ATPase, transduction domain A Metal cation-transporting ATPase, ATP-binding domain N 11
Translation proteins Ribosomal protein S5 domain 2-like 11
FAD/NAD(P)-binding domain Nitrite and sulphite reductase 4Fe-4S domain-like 11
GreA transcript cleavage protein, N-terminal domain FKBP-like 11
Cytochrome c oxidase subunit II-like, transmembrane region Cytochrome c 11
Thiolase-like Acyl-CoA N-acyltransferases (Nat) 11
Nucleotide-diphospho-sugar transferases PilZ domain-like 11
PrpR receptor domain-like P-loop containing nucleoside triphosphate hydrolases 11
Transcription factor NusA, N-terminal domain Nucleic acid-binding proteins 11
RuBisCO, large subunit, small (N-terminal) domain RuBisCo, C-terminal domain 11
Riboflavin synthase domain-like Riboflavin synthase domain-like 11
"Winged helix" DNA-binding domain Periplasmic binding protein-like I 11
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 11
Class II aaRS and biotin synthetases C-terminal domain of ProRS 11
Rudiment single hybrid motif post-HMGL domain-like 11
N-acetylmuramoyl-L-alanine amidase-like PGBD-like 11
(Trans)glycosidases Class I glutamine amidotransferase-like 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
CheY-binding domain of CheA CheW-like 11
R1 subunit of ribonucleotide reductase, N-terminal domain PFL-like glycyl radical enzymes 11
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 11
Acyl-CoA N-acyltransferases (Nat) Carbon-nitrogen hydrolase 11
P-loop containing nucleoside triphosphate hydrolases Restriction endonuclease-like 11
P-loop containing nucleoside triphosphate hydrolases Smc hinge domain 11
NAD(P)-binding Rossmann-fold domains PYP-like sensor domain (PAS domain) 11
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 11
YojJ-like RuvA domain 2-like 11
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 11
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 11
NTF2-like Penicillin binding protein dimerisation domain 11
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 11
Families 57/38 glycoside transferase middle domain Galactose mutarotase-like 11
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
PIN domain-like DNA/RNA polymerases 11
Histidine-containing phosphotransfer domain, HPT domain Homodimeric domain of signal transducing histidine kinase 11
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
P-loop containing nucleoside triphosphate hydrolases TGS-like 11
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
YhbC-like, N-terminal domain YhbC-like, C-terminal domain 11
Nucleic acid-binding proteins Prokaryotic type KH domain (KH-domain type II) 11
Rhomboid-like TPR-like 11
CheY-like Homeodomain-like 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
Nucleotidyltransferase PHP domain-like 11
N-terminal domain of MutM-like DNA repair proteins Glucocorticoid receptor-like (DNA-binding domain) 11
Globin-like Methyl-accepting chemotaxis protein (MCP) signaling domain 11
FabD/lysophospholipase-like Acyl-CoA N-acyltransferases (Nat) 11
FAD/NAD(P)-binding domain Nitrite/Sulfite reductase N-terminal domain-like 11
"Winged helix" DNA-binding domain Iron-dependent repressor protein, dimerization domain 11
Dihydropteroate synthetase-like Cobalamin (vitamin B12)-binding domain 11
Gamma-glutamyl cyclotransferase-like Gamma-glutamyl cyclotransferase-like 11
Translation proteins Initiation factor IF2/eIF5b, domain 3 11
Glutamyl tRNA-reductase catalytic, N-terminal domain NAD(P)-binding Rossmann-fold domains 11
"Winged helix" DNA-binding domain C-terminal domain of arginine repressor 11
P-loop containing nucleoside triphosphate hydrolases Dimeric alpha+beta barrel 11
Class II aaRS ABD-related C-terminal domain of ProRS 11
Translation proteins PRC-barrel domain 11
Nucleotidylyl transferase tRNA-binding arm 11
Formate/glycerate dehydrogenase catalytic domain-like ACT-like 11
2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain Alkaline phosphatase-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Alpha subunit of glutamate synthase, C-terminal domain 11
MoeA N-terminal region -like MoeA C-terminal domain-like 11
GroEL equatorial domain-like GroEL-intermediate domain like 11
Globin-like Ferredoxin reductase-like, C-terminal NADP-linked domain 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
NAD(P)-binding Rossmann-fold domains ClpP/crotonase 11
NagB/RpiA/CoA transferase-like alpha-helical ferredoxin 11
FAD/NAD(P)-binding domain HI0933 insert domain-like 11
DeoB insert domain-like Alkaline phosphatase-like 11
MetI-like Periplasmic binding protein-like II 11
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 11
Tropomyosin Duplicated hybrid motif 11
PreATP-grasp domain Aldolase 11
YbaK/ProRS associated domain Class II aaRS ABD-related 11
LysM domain L,D-transpeptidase catalytic domain-like 11
Ribonuclease H-like P-loop containing nucleoside triphosphate hydrolases 11
Six-hairpin glycosidases Carbohydrate-binding domain 11
Nucleic acid-binding proteins BRCT domain 11
KaiA/RbsU domain PP2C-like 11
Globin-like Riboflavin synthase domain-like 11
Cryptochrome/photolyase, N-terminal domain Cryptochrome/photolyase FAD-binding domain 11
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 11
NAD(P)-binding Rossmann-fold domains Siroheme synthase middle domains-like 11
Lamin A/C globular tail domain Metallo-dependent phosphatases 11
Translation proteins ThrRS/AlaRS common domain 11
PEP carboxykinase N-terminal domain PEP carboxykinase-like 11
HprK N-terminal domain-like PEP carboxykinase-like 11
FMN-linked oxidoreductases Alpha subunit of glutamate synthase, C-terminal domain 11
5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 11
CBS-domain pair MgtE membrane domain-like 11
PrpR receptor domain-like Homeodomain-like 11
Cupredoxins Cupredoxins 11
Probable ACP-binding domain of malonyl-CoA ACP transacylase HAD-like 11
Metallo-dependent phosphatases Metallo-dependent phosphatases 11
Nucleotide cyclase EAL domain-like 11
PDZ domain-like Ribosomal protein S5 domain 2-like 11
a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Cytochrome c 11
Diaminopimelate epimerase-like Diaminopimelate epimerase-like 11
Hsp33 domain HSP33 redox switch-like 11
PUA domain-like S-adenosyl-L-methionine-dependent methyltransferases 11
Obg GTP-binding protein N-terminal domain Obg GTP-binding protein C-terminal domain 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
EAL domain-like Sensory domain-like 11
6-phosphogluconate dehydrogenase C-terminal domain-like ACT-like 11
PUA domain-like Ribosomal protein S5 domain 2-like 11
Epsilon subunit of F1F0-ATP synthase N-terminal domain Epsilon subunit of F1F0-ATP synthase C-terminal domain 11
Cystatin/monellin Cystatin/monellin 11
Hypothetical protein SAV1430 ARM repeat 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
Lysozyme-like Cysteine proteinases 11
PYP-like sensor domain (PAS domain) EAL domain-like 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11
Penicillin-binding protein 2x (pbp-2x), c-terminal domain Penicillin-binding protein 2x (pbp-2x), c-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 11
Duplicated hybrid motif LysM domain 11
Tetrapyrrole methylase all-alpha NTP pyrophosphatases 11
Respiratory nitrate reductase 1 gamma chain alpha-helical ferredoxin 11
P-loop containing nucleoside triphosphate hydrolases Metallo-dependent phosphatases 11
Histidine-containing phosphotransfer domain, HPT domain CheW-like 11
Nucleotidyltransferase ACT-like 11
Methionine synthase domain Cobalamin (vitamin B12)-binding domain 11
TPR-like Hypothetical protein MPN330 11
Glutathione synthetase ATP-binding domain-like Single hybrid motif 11
"Winged helix" DNA-binding domain Actin-like ATPase domain 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 11
GIY-YIG endonuclease RuvA domain 2-like 11
Nucleic acid-binding proteins GAD domain-like 11
WD40 repeat-like Quinoprotein alcohol dehydrogenase-like 11
Glycoside hydrolase/deacetylase Galactose mutarotase-like 11
NAD(P)-binding Rossmann-fold domains Glutamyl tRNA-reductase dimerization domain 11
SirA-like Rhodanese/Cell cycle control phosphatase 11
Cna protein B-type domain Cna protein B-type domain 11
Histidine-containing phosphotransfer domain, HPT domain CheY-binding domain of CheA 11
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 11
Thiamin pyrophosphokinase, catalytic domain Thiamin pyrophosphokinase, substrate-binding domain 11
5' to 3' exonuclease, C-terminal subdomain DNA/RNA polymerases 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
CheY-like Methylesterase CheB, C-terminal domain 11
Inosine monophosphate dehydrogenase (IMPDH) Inosine monophosphate dehydrogenase (IMPDH) 11
Methylesterase CheB, C-terminal domain Homodimeric domain of signal transducing histidine kinase 11
Cytochrome P450 Flavoproteins 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphoenolpyruvate/pyruvate domain 11
HisI-like all-alpha NTP pyrophosphatases 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 11
Nucleotidylyl transferase Nucleic acid-binding proteins 11
Methionine synthase domain Methionine synthase activation domain-like 11
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 11
6-phosphogluconate dehydrogenase C-terminal domain-like ClpP/crotonase 11
PK beta-barrel domain-like PK C-terminal domain-like 11

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