SUPERFAMILY 1.75 HMM library and genome assignments server

Domain combination pairs in Bacillus weihenstephanensis KBAB4

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

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Adjacent domain pairs graph

Graph of adjacent domain pairs.


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Domain combination pairs

713 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 4810
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 3212
CheY-like C-terminal effector domain of the bipartite response regulators 303
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 263
Homeodomain-like Tetracyclin repressor-like, C-terminal domain 221
HAMP domain-like Homodimeric domain of signal transducing histidine kinase 222
HAMP domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 222
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 212
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 214
Actin-like ATPase domain Actin-like ATPase domain 184
"Winged helix" DNA-binding domain Periplasmic binding protein-like II 171
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 173
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 134
GroES-like NAD(P)-binding Rossmann-fold domains 121
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 121
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 117
Composite domain of metallo-dependent hydrolases Metallo-dependent hydrolases 113
Penicillin binding protein dimerisation domain beta-lactamase/transpeptidase-like 116
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 93
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 92
Glutathione synthetase ATP-binding domain-like PreATP-grasp domain 95
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 96
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 98
"Winged helix" DNA-binding domain PLP-dependent transferases 91
Homeodomain-like Homeodomain-like 95
Phospholipase D/nuclease Phospholipase D/nuclease 84
(Trans)glycosidases Glycosyl hydrolase domain 84
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 86
lambda repressor-like DNA-binding domains Periplasmic binding protein-like I 81
CoA-dependent acyltransferases Acetyl-CoA synthetase-like 87
Acetyl-CoA synthetase-like ACP-like 87
Calcium ATPase, transduction domain A HAD-like 85
CoA-dependent acyltransferases CoA-dependent acyltransferases 87
HAD-like Calcium ATPase, transmembrane domain M 85
CoA-dependent acyltransferases ACP-like 87
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 82
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 75
P-loop containing nucleoside triphosphate hydrolases MOP-like 71
Class II aaRS and biotin synthetases Class II aaRS ABD-related 74
Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase C-terminal domain-like 63
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 62
PYP-like sensor domain (PAS domain) EAL domain-like 63
ACP-like ACP-like 66
PYP-like sensor domain (PAS domain) Nucleotide cyclase 63
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 63
Fibronectin type III Carbohydrate binding domain 63
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 61
Nucleotide cyclase EAL domain-like 63
Metallo-dependent phosphatases 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain 64
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 63
PYP-like sensor domain (PAS domain) P-loop containing nucleoside triphosphate hydrolases 64
PYP-like sensor domain (PAS domain) Homeodomain-like 64
PYP-like sensor domain (PAS domain) PYP-like sensor domain (PAS domain) 66
Lysozyme-like beta-lactamase/transpeptidase-like 63
Acetyl-CoA synthetase-like Acetyl-CoA synthetase-like 66
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 53
lambda repressor-like DNA-binding domains RmlC-like cupins 51
6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 51
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 51
"Winged helix" DNA-binding domain Dimeric alpha+beta barrel 51
NAD(P)-binding Rossmann-fold domains UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 51
Alpha-L RNA-binding motif Pseudouridine synthase 51
"Winged helix" DNA-binding domain NagB/RpiA/CoA transferase-like 51
PreATP-grasp domain Rudiment single hybrid motif 52
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 52
CBS-domain pair FAD-binding/transporter-associated domain-like 51
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Adenine nucleotide alpha hydrolases-like 51
"Winged helix" DNA-binding domain P-loop containing nucleoside triphosphate hydrolases 54
P-loop containing nucleoside triphosphate hydrolases Translation proteins 54
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein S5 domain 2-like 54
"Winged helix" DNA-binding domain Chorismate lyase-like 51
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 53
GAF domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 55
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 51
cAMP-binding domain-like "Winged helix" DNA-binding domain 51
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 43
Thiolase-like Thiolase-like 41
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 44
PLP-binding barrel Alanine racemase C-terminal domain-like 42
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 41
TPR-like TPR-like 43
Single hybrid motif Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 41
EF-G C-terminal domain-like EF-G C-terminal domain-like 43
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 42
Triger factor/SurA peptide-binding domain-like FKBP-like 42
NAD(P)-binding Rossmann-fold domains ACT-like 43
lambda repressor-like DNA-binding domains TPR-like 42
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex CoA-dependent acyltransferases 41
Aspartate/glutamate racemase Aspartate/glutamate racemase 41
"Winged helix" DNA-binding domain GntR ligand-binding domain-like 41
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 41
Cna protein B-type domain Cna protein B-type domain 44
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 44
Single hybrid motif CoA-dependent acyltransferases 41
PDZ domain-like Trypsin-like serine proteases 42
Enolase N-terminal domain-like Enolase C-terminal domain-like 41
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 43
beta-lactamase/transpeptidase-like Penicillin-binding protein associated domain 42
Bacillus cereus metalloprotein-like Bacillus cereus metalloprotein-like 41
Sensory domain-like Methyl-accepting chemotaxis protein (MCP) signaling domain 42
Class II aaRS and biotin synthetases ThrRS/AlaRS common domain 32
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 31
E set domains Fibronectin type III 31
ACT-like ACT-like 32
Aminopeptidase/glucanase lid domain Zn-dependent exopeptidases 31
PTS-regulatory domain, PRD PTS-regulatory domain, PRD 33
HMA, heavy metal-associated domain HAD-like 33
Sensory domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 31
4'-phosphopantetheinyl transferase 4'-phosphopantetheinyl transferase 31
E set domains Carbohydrate binding domain 31
Metal cation-transporting ATPase, ATP-binding domain N Calcium ATPase, transmembrane domain M 31
Class I glutamine amidotransferase-like LD-carboxypeptidase A C-terminal domain-like 31
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 31
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 33
N-terminal domain of DnaB helicase P-loop containing nucleoside triphosphate hydrolases 31
Translation proteins EF-G C-terminal domain-like 32
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 31
Glucocorticoid receptor-like (DNA-binding domain) P-loop containing nucleoside triphosphate hydrolases 32
Putative DNA-binding domain Probable bacterial effector-binding domain 31
Penicillin binding protein dimerisation domain Penicillin-binding protein 2x (pbp-2x), c-terminal domain 33
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 31
Metal cation-transporting ATPase, ATP-binding domain N HAD-like 31
TPR-like P-loop containing nucleoside triphosphate hydrolases 32
Sensory domain-like PYP-like sensor domain (PAS domain) 31
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 32
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 33
Homeodomain-like Probable bacterial effector-binding domain 31
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 31
P-loop containing nucleoside triphosphate hydrolases ACT-like 31
Calcium ATPase, transduction domain A Metal cation-transporting ATPase, ATP-binding domain N 31
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 32
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 32
HAMP domain-like PYP-like sensor domain (PAS domain) 31
NAD(P)-binding Rossmann-fold domains TrkA C-terminal domain-like 33
Nucleic acid-binding proteins Nucleic acid-binding proteins 33
Sensory domain-like Sporulation response regulatory protein Spo0B 31
tRNA-binding arm Class II aaRS and biotin synthetases 31
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 33
(Trans)glycosidases Cyclophilin-like 31
Sporulation response regulatory protein Spo0B ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 31
Nucleic acid-binding proteins RuvA domain 2-like 33
Nucleotide-diphospho-sugar transferases TPR-like 31
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 33
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 31
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 33
PYP-like sensor domain (PAS domain) Sporulation response regulatory protein Spo0B 31
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 32
beta-lactamase/transpeptidase-like Penicillin-binding protein 2x (pbp-2x), c-terminal domain 33
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 31
Ribosomal protein S5 domain 2-like EF-G C-terminal domain-like 32
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheY-like 22
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 21
NEAT domain-like L domain-like 22
Rhodanese/Cell cycle control phosphatase Metallo-hydrolase/oxidoreductase 22
NEAT domain-like E set domains 22
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Pyrimidine nucleoside phosphorylase C-terminal domain 21
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 21
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 21
HMA, heavy metal-associated domain HMA, heavy metal-associated domain 22
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 21
Voltage-gated potassium channels NAD(P)-binding Rossmann-fold domains 22
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 21
TGS-like ThrRS/AlaRS common domain 21
ACP-like NAD(P)-binding Rossmann-fold domains 22
lambda integrase-like, N-terminal domain DNA breaking-rejoining enzymes 21
Chemotaxis receptor methyltransferase CheR, N-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 21
Ribonuclease H-like DNA/RNA polymerases 22
Homeodomain-like SIS domain 21
PLP-dependent transferases Ornithine decarboxylase C-terminal domain 21
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 22
PKD domain Collagen-binding domain 21
MurCD N-terminal domain MurD-like peptide ligases, catalytic domain 21
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), C-terminal domain 21
ThrRS/AlaRS common domain Class II aaRS ABD-related 21
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 22
FAD-binding/transporter-associated domain-like Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain 21
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 22
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 22
MoeA N-terminal region -like MoeA C-terminal domain-like 21
MoeA N-terminal region -like Molybdenum cofactor biosynthesis proteins 21
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 21
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 22
LysM domain LysM domain 22
Cytochrome c oxidase subunit II-like, transmembrane region Cupredoxins 22
"Winged helix" DNA-binding domain GAF domain-like 21
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 21
Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Pyrimidine nucleoside phosphorylase C-terminal domain 21
Rhodanese/Cell cycle control phosphatase Rhodanese/Cell cycle control phosphatase 22
TGS-like Class II aaRS and biotin synthetases 21
ACP-like alpha/beta-Hydrolases 22
CoA-dependent acyltransferases alpha/beta-Hydrolases 22
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 21
Nucleotidylyl transferase Alpha-L RNA-binding motif 21
E set domains (Trans)glycosidases 22
MurCD N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
Bacterial adhesins Cna protein B-type domain 22
PTS system IIB component-like Phoshotransferase/anion transport protein 22
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 22
Nucleic acid-binding proteins S-adenosyl-L-methionine-dependent methyltransferases 21
GAF domain-like GAF domain-like 22
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 21
Nucleic acid-binding proteins Ribonuclease H-like 22
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 21
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 22
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 21
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 21
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 22
Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases 21
MetI-like MetI-like 21
GAF domain-like Homodimeric domain of signal transducing histidine kinase 22
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 22
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain ACT-like 21
CheC-like Surface presentation of antigens (SPOA) 22
TGS-like Class II aaRS ABD-related 21
Carbamate kinase-like ACT-like 21
PurM N-terminal domain-like PurM C-terminal domain-like 22
Acetyl-CoA synthetase-like alpha/beta-Hydrolases 22
DNA clamp DNA clamp 21
L domain-like E set domains 22
Translation proteins Ribosomal protein S5 domain 2-like 21
Molybdenum cofactor biosynthesis proteins MoeA C-terminal domain-like 21
Penicillin-binding protein 2x (pbp-2x), c-terminal domain Penicillin-binding protein 2x (pbp-2x), c-terminal domain 22
PA domain Zn-dependent exopeptidases 21
NTF2-like beta-lactamase/transpeptidase-like 21
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
NAD(P)-binding Rossmann-fold domains Siroheme synthase middle domains-like 21
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 21
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 21
"Winged helix" DNA-binding domain CBS-domain pair 22
NTF2-like Penicillin binding protein dimerisation domain 21
NagB/RpiA/CoA transferase-like alpha-helical ferredoxin 21
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 22
Formate dehydrogenase/DMSO reductase, domains 1-3 ADC-like 22
"Winged helix" DNA-binding domain Thioesterase/thiol ester dehydrase-isomerase 22
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 21
Nucleic acid-binding proteins Translation proteins SH3-like domain 22
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 22
Methylated DNA-protein cysteine methyltransferase domain Methylated DNA-protein cysteine methyltransferase, C-terminal domain 21
HD-domain/PDEase-like Nucleotidyltransferase 22
"Winged helix" DNA-binding domain PTS-regulatory domain, PRD 22
HD-domain/PDEase-like TGS-like 22
Sm-like ribonucleoproteins Mechanosensitive channel protein MscS (YggB), C-terminal domain 21
Nucleotidyltransferase TGS-like 22
Bacterial adhesins Bacterial adhesins 22
Translation proteins ThrRS/AlaRS common domain 22
L30e-like alpha/beta knot 21
Cell wall binding repeat Cell wall binding repeat 11
PK beta-barrel domain-like Phosphohistidine domain 11
L domain-like Methyl-accepting chemotaxis protein (MCP) signaling domain 11
Phase 1 flagellin Phase 1 flagellin 11
Glutathione synthetase ATP-binding domain-like Succinyl-CoA synthetase domains 11
Histidine-containing phosphotransfer domain, HPT domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Glucose permease domain IIB Duplicated hybrid motif 11
Eukaryotic type KH-domain (KH-domain type I) Nucleic acid-binding proteins 11
NAD(P)-binding Rossmann-fold domains alpha/beta-Hydrolases 11
Isochorismatase-like hydrolases ACP-like 11
Thioredoxin-like FAD/NAD(P)-binding domain 11
Thiolase-like NAD(P)-binding Rossmann-fold domains 11
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 11
PDZ domain-like PGBD-like 11
CarD-like TRCF domain-like 11
Ribonuclease H-like RuvA domain 2-like 11
PEP carboxykinase N-terminal domain PEP carboxykinase-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Alpha subunit of glutamate synthase, C-terminal domain 11
Nucleic acid-binding proteins Putative DNA-binding domain 11
Adenine nucleotide alpha hydrolases-like PheT/TilS domain 11
PUA domain-like S-adenosyl-L-methionine-dependent methyltransferases 11
E set domains Outer arm dynein light chain 1 11
Homocysteine S-methyltransferase Methionine synthase activation domain-like 11
a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Cytochrome c 11
PUA domain-like Nucleotidylyl transferase 11
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 11
PK C-terminal domain-like Phosphohistidine domain 11
Tex N-terminal region-like Ribonuclease H-like 11
"Winged helix" DNA-binding domain PRTase-like 11
Sec63 N-terminal domain-like Nucleotidyltransferase 11
2Fe-2S ferredoxin-like Formate dehydrogenase/DMSO reductase, domains 1-3 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11
P-loop containing nucleoside triphosphate hydrolases PTS system fructose IIA component-like 11
Glutamyl tRNA-reductase catalytic, N-terminal domain Glutamyl tRNA-reductase dimerization domain 11
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 11
DNA-glycosylase Nudix 11
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 11
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 11
Duplicated hybrid motif LysM domain 11
DeoB insert domain-like Alkaline phosphatase-like 11
HprK N-terminal domain-like Thioesterase/thiol ester dehydrase-isomerase 11
2Fe-2S ferredoxin-like 4Fe-4S ferredoxins 11
RBP11-like subunits of RNA polymerase C-terminal domain of RNA polymerase alpha subunit 11
PreATP-grasp domain PreATP-grasp domain 11
Nucleic acid-binding proteins GAD domain-like 11
5' to 3' exonuclease, C-terminal subdomain Ribonuclease H-like 11
RuvA domain 2-like BRCT domain 11
Acyl-CoA N-acyltransferases (Nat) SCP-like 11
Homodimeric domain of signal transducing histidine kinase CheW-like 11
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 11
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB transmembrane domain 11
Translation proteins PRC-barrel domain 11
Duplicated hybrid motif Hedgehog/DD-peptidase 11
Epsilon subunit of F1F0-ATP synthase N-terminal domain Epsilon subunit of F1F0-ATP synthase C-terminal domain 11
MalF N-terminal region-like MetI-like 11
4Fe-4S ferredoxins ADC-like 11
Translation proteins Translation proteins 11
post-HMGL domain-like Single hybrid motif 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleotidylyl transferase 11
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 11
Terpenoid cyclases/Protein prenyltransferases Terpenoid cyclases/Protein prenyltransferases 11
Rudiment single hybrid motif post-HMGL domain-like 11
Nucleic acid-binding proteins DNA helicase RuvA subunit, C-terminal domain 11
L domain-like Outer arm dynein light chain 1 11
RNase III domain-like dsRNA-binding domain-like 11
N-acetylmuramoyl-L-alanine amidase-like Hedgehog/DD-peptidase 11
Multidrug efflux transporter AcrB transmembrane domain Methyl-accepting chemotaxis protein (MCP) signaling domain 11
Tetrapyrrole methylase HemD-like 11
Fibronectin type III Carbohydrate-binding domain 11
CheY-like PP2C-like 11
MetI-like Periplasmic binding protein-like II 11
Resolvase-like Homeodomain-like 11
Nucleotidyltransferase PAP/OAS1 substrate-binding domain 11
S-adenosyl-L-methionine-dependent methyltransferases NAD(P)-binding Rossmann-fold domains 11
Nucleic acid-binding proteins AF1531-like 11
Putative DNA-binding domain Antibiotic binding domain of TipA-like multidrug resistance regulators 11
Homocysteine S-methyltransferase Dihydropteroate synthetase-like 11
Cytochrome P450 Ferredoxin reductase-like, C-terminal NADP-linked domain 11
R1 subunit of ribonucleotide reductase, N-terminal domain PFL-like glycyl radical enzymes 11
Galactose-binding domain-like Galactose-binding domain-like 11
NAD(P)-binding Rossmann-fold domains ClpP/crotonase 11
Cupredoxins Cupredoxins 11
Starch-binding domain-like E set domains 11
Actin-like ATPase domain HD-domain/PDEase-like 11
Homocysteine S-methyltransferase Cobalamin (vitamin B12)-binding domain 11
P-loop containing nucleoside triphosphate hydrolases Obg GTP-binding protein C-terminal domain 11
Class II aaRS and biotin synthetases Translation proteins 11
Transcription factor NusA, N-terminal domain Nucleic acid-binding proteins 11
Sigma2 domain of RNA polymerase sigma factors NTF2-like 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
GreA transcript cleavage protein, N-terminal domain FKBP-like 11
PIN domain-like Ribonuclease H-like 11
"Winged helix" DNA-binding domain NAD(P)-binding Rossmann-fold domains 11
Ribosomal protein L6 Ribosomal protein L6 11
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
Ribonuclease H-like P-loop containing nucleoside triphosphate hydrolases 11
delta-Endotoxin (insectocide), N-terminal domain delta-Endotoxin (insectocide), middle domain 11
Nucleic acid-binding proteins Anticodon-binding domain of PheRS 11
Lysozyme-like Hedgehog/DD-peptidase 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 11
Glutamyl tRNA-reductase catalytic, N-terminal domain NAD(P)-binding Rossmann-fold domains 11
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 11
Adenine nucleotide alpha hydrolases-like MesJ substrate recognition domain-like 11
P-loop containing nucleoside triphosphate hydrolases TrpR-like 11
Carbamate kinase-like PUA domain-like 11
Formate/glycerate dehydrogenase catalytic domain-like ACT-like 11
Acyl-CoA N-acyltransferases (Nat) PLP-dependent transferases 11
"Winged helix" DNA-binding domain Actin-like ATPase domain 11
Sigma3 and sigma4 domains of RNA polymerase sigma factors NTF2-like 11
Class II aaRS and biotin synthetases GAD domain-like 11
PH0987 N-terminal domain-like Cyclophilin-like 11
Glutathione synthetase ATP-binding domain-like Single hybrid motif 11
ClpP/crotonase PGBD-like 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphohistidine domain 11
Nucleotidylyl transferase tRNA-binding arm 11
PPK N-terminal domain-like Phospholipase D/nuclease 11
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 11
2Fe-2S ferredoxin-like ADC-like 11
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 11
Putative DNA-binding domain Periplasmic binding protein-like II 11
Nucleotide-binding domain FAD-linked reductases, C-terminal domain 11
"Winged helix" DNA-binding domain C-terminal domain of transcriptional repressors 11
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 11
DNA polymerase beta, N-terminal domain-like Nucleotidyltransferase 11
PreATP-grasp domain Aldolase 11
Nucleotidylyl transferase Riboflavin kinase-like 11
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 11
YhbC-like, N-terminal domain YhbC-like, C-terminal domain 11
ClpP/crotonase ClpP/crotonase 11
RuvA domain 2-like JAB1/MPN domain 11
lambda repressor-like DNA-binding domains Cyanase C-terminal domain 11
Nucleotidyltransferase ACT-like 11
Nucleic acid-binding proteins BRCT domain 11
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
P-loop containing nucleoside triphosphate hydrolases Restriction endonuclease-like 11
Eukaryotic type KH-domain (KH-domain type I) HD-domain/PDEase-like 11
Class II aaRS ABD-related C-terminal domain of ProRS 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 11
PA domain Subtilisin-like 11
Outer arm dynein light chain 1 Methyl-accepting chemotaxis protein (MCP) signaling domain 11
Glutathione synthetase ATP-binding domain-like Aldolase 11
UDP-Glycosyltransferase/glycogen phosphorylase Nucleotide-diphospho-sugar transferases 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
L9 N-domain-like Ribosomal protein L9 C-domain 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
P-loop containing nucleoside triphosphate hydrolases SMR domain-like 11
"Winged helix" DNA-binding domain Phoshotransferase/anion transport protein 11
beta-lactamase/transpeptidase-like ABC transporter transmembrane region 11
Chorismate mutase II Aldolase 11
6-phosphogluconate dehydrogenase C-terminal domain-like ClpP/crotonase 11
(Trans)glycosidases Chitinase insertion domain 11
Chitinase insertion domain Fibronectin type III 11
P-loop containing nucleoside triphosphate hydrolases C-terminal UvrC-binding domain of UvrB 11
Fibronectin type III Concanavalin A-like lectins/glucanases 11
CBS-domain pair ACT-like 11
Acetyl-CoA synthetase-like NAD(P)-binding Rossmann-fold domains 11
Cytochrome P450 Riboflavin synthase domain-like 11
E set domains E set domains 11
6-phosphogluconate dehydrogenase C-terminal domain-like ACT-like 11
NAD(P)-binding Rossmann-fold domains Homeodomain-like 11
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 11
HD-domain/PDEase-like ACT-like 11
Acyl-CoA N-acyltransferases (Nat) Acyl-CoA N-acyltransferases (Nat) 11
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 11
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FMN-linked oxidoreductases 11
Sigma3 and sigma4 domains of RNA polymerase sigma factors NagB/RpiA/CoA transferase-like 11
Dihydropteroate synthetase-like Methionine synthase domain 11
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 11
PUA domain-like Ribosomal protein S5 domain 2-like 11
delta-Endotoxin (insectocide), N-terminal domain Galactose-binding domain-like 11
Nucleotidylyl transferase Nucleic acid-binding proteins 11
Aconitase iron-sulfur domain LeuD/IlvD-like 11
Rudiment single hybrid motif Aldolase 11
GroEL equatorial domain-like GroEL-intermediate domain like 11
Hsp33 domain HSP33 redox switch-like 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
delta-Endotoxin (insectocide), middle domain Galactose-binding domain-like 11
CheY-binding domain of CheA CheW-like 11
"Winged helix" DNA-binding domain PTS system fructose IIA component-like 11
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 11
HprK N-terminal domain-like PEP carboxykinase-like 11
Dihydropteroate synthetase-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) Homeodomain-like 11
HprK N-terminal domain-like CBS-domain pair 11
Fe-S cluster assembly (FSCA) domain-like P-loop containing nucleoside triphosphate hydrolases 11
PDZ domain-like Ribosomal protein S5 domain 2-like 11
2Fe-2S ferredoxin-like alpha-helical ferredoxin 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
DPP6 N-terminal domain-like alpha/beta-Hydrolases 11
NagB/RpiA/CoA transferase-like D-ribose-5-phosphate isomerase (RpiA), lid domain 11
Flavoproteins Ferredoxin reductase-like, C-terminal NADP-linked domain 11
Zinc beta-ribbon DNA primase core 11
Class II aaRS and biotin synthetases C-terminal domain of ProRS 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
all-alpha NTP pyrophosphatases all-alpha NTP pyrophosphatases 11
Thiolase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 11
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 11
Subtilisin-like Carbohydrate binding domain 11
FliG FliG 11
6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 11
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
NAD(P)-binding Rossmann-fold domains P-loop containing nucleoside triphosphate hydrolases 11
"Winged helix" DNA-binding domain Putative transcriptional regulator TM1602, C-terminal domain 11
GroEL equatorial domain-like GroEL apical domain-like 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
ABC transporter involved in vitamin B12 uptake, BtuC ABC transporter involved in vitamin B12 uptake, BtuC 11
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 11
YbaK/ProRS associated domain Class II aaRS ABD-related 11
Putative DNA-binding domain Anticodon-binding domain of PheRS 11
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 11
DNA polymerase beta, N-terminal domain-like Sec63 N-terminal domain-like 11
PDZ domain-like ClpP/crotonase 11
P-loop containing nucleoside triphosphate hydrolases HRDC-like 11
Thiolase-like ACP-like 11
FAD/NAD(P)-binding domain ISP domain 11
Cobalamin (vitamin B12)-binding domain Methionine synthase activation domain-like 11
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
NHL repeat Calcium-dependent phosphotriesterase 11
4Fe-4S ferredoxins Formate dehydrogenase/DMSO reductase, domains 1-3 11
CheY-binding domain of CheA ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Alpha-L RNA-binding motif S-adenosyl-L-methionine-dependent methyltransferases 11
C-terminal UvrC-binding domain of UvrB RuvA domain 2-like 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
Nucleic acid-binding proteins ArfGap/RecO-like zinc finger 11
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 11
Lysozyme-like Fibronectin type III 11
PreATP-grasp domain Methylglyoxal synthase-like 11
Prokaryotic type I DNA topoisomerase Zinc beta-ribbon 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
DNA repair protein MutS, domain III SMR domain-like 11
Sec63 N-terminal domain-like PHP domain-like 11
Protein kinase-like (PK-like) TPR-like 11
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 11
ParB/Sulfiredoxin KorB DNA-binding domain-like 11
EAL domain-like Sensory domain-like 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
Rudiment single hybrid motif Single hybrid motif 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 11
Probable ACP-binding domain of malonyl-CoA ACP transacylase NAD(P)-binding Rossmann-fold domains 11
Nucleotidyltransferase Poly A polymerase C-terminal region-like 11
ALDH-like Dehydroquinate synthase-like 11
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 11
Homocysteine S-methyltransferase Methionine synthase domain 11
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 11
P-loop containing nucleoside triphosphate hydrolases HSP20-like chaperones 11
EsxAB dimer-like Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Nucleic acid-binding proteins 11
Chaperone J-domain TPR-like 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 11
2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain Alkaline phosphatase-like 11
Nucleic acid-binding proteins Prokaryotic type KH domain (KH-domain type II) 11
Protein kinase-like (PK-like) HCP-like 11
CheW-like CheY-like 11
YojJ-like RuvA domain 2-like 11
P-loop containing nucleoside triphosphate hydrolases PTS-regulatory domain, PRD 11
E set domains Glycosyl hydrolase domain 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphoenolpyruvate/pyruvate domain 11
Homocysteine S-methyltransferase FAD-linked oxidoreductase 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
RCC1/BLIP-II RCC1/BLIP-II 11
Starch-binding domain-like (Trans)glycosidases 11
Transcription factor NusA, N-terminal domain Prokaryotic type KH domain (KH-domain type II) 11
GAF domain-like PYP-like sensor domain (PAS domain) 11
Ribonuclease H-like AF1531-like 11
YrdC/RibB RibA-like 11
"Winged helix" DNA-binding domain HRDC-like 11
Nitrite/Sulfite reductase N-terminal domain-like Nitrite/Sulfite reductase N-terminal domain-like 11
Starch-binding domain-like Glycosyl hydrolase domain 11
RuvA domain 2-like RuvA domain 2-like 11
Regulatory protein AraC Homeodomain-like 11
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 11
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 11
Rho N-terminal domain-like Nucleic acid-binding proteins 11
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 11
Globin-like Ferredoxin reductase-like, C-terminal NADP-linked domain 11
Formyltransferase FMT C-terminal domain-like 11
E set domains Methyl-accepting chemotaxis protein (MCP) signaling domain 11
Aldolase post-HMGL domain-like 11
GroEL-intermediate domain like GroEL apical domain-like 11
Cytochrome P450 Flavoproteins 11
Heme-dependent catalase-like Class I glutamine amidotransferase-like 11
PPK N-terminal domain-like PHP14-like 11
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 11
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 11
RuBisCO, large subunit, small (N-terminal) domain RuBisCo, C-terminal domain 11
BH3980-like MFS general substrate transporter 11
PreATP-grasp domain Single hybrid motif 11
"Winged helix" DNA-binding domain C-terminal domain of arginine repressor 11
beta-lactamase/transpeptidase-like Fibronectin type III 11
Methionine synthase domain Methionine synthase activation domain-like 11
Subtilisin-like Fibronectin type III 11
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 11
Hedgehog/intein (Hint) domain Homing endonucleases 11
P-loop containing nucleoside triphosphate hydrolases Smc hinge domain 11
Tryptophan synthase beta subunit-like PLP-dependent enzymes ACT-like 11
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 11
Methionine synthase domain Cobalamin (vitamin B12)-binding domain 11
PheT/TilS domain Class II aaRS and biotin synthetases 11
Chaperone J-domain HSP40/DnaJ peptide-binding domain 11
Homodimeric domain of signal transducing histidine kinase CheY-like 11
Class II aaRS and biotin synthetases C-terminal domain of transcriptional repressors 11
Riboflavin synthase domain-like Riboflavin synthase domain-like 11
Globin-like Methyl-accepting chemotaxis protein (MCP) signaling domain 11
Globin-like Riboflavin synthase domain-like 11
Metallo-dependent phosphatases Fibronectin type III 11
Glutamine synthetase/guanido kinase GatB/YqeY motif 11
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases TGS-like 11
PreATP-grasp domain post-HMGL domain-like 11
Dihydropteroate synthetase-like Methionine synthase activation domain-like 11
FAD/NAD(P)-binding domain HI0933 insert domain-like 11
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 11
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
Tex N-terminal region-like RuvA domain 2-like 11
Dimeric alpha+beta barrel Dimeric alpha+beta barrel 11
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase C-terminal effector domain of the bipartite response regulators 11
PK beta-barrel domain-like PK C-terminal domain-like 11
PTS-regulatory domain, PRD Phoshotransferase/anion transport protein 11
(Trans)glycosidases Fibronectin type III 11
Oligoxyloglucan reducing end-specific cellobiohydrolase WD40 repeat-like 11
CBS-domain pair Thioesterase/thiol ester dehydrase-isomerase 11
Tex N-terminal region-like Nucleic acid-binding proteins 11
FAD/NAD(P)-binding domain Nitrite/Sulfite reductase N-terminal domain-like 11
"Winged helix" DNA-binding domain Class II aaRS and biotin synthetases 11
Double Clp-N motif Acyl-CoA N-acyltransferases (Nat) 11
Cystatin/monellin Cystatin/monellin 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
NEAT domain-like Outer arm dynein light chain 1 11
Nitrite and sulphite reductase 4Fe-4S domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 11
PHP14-like Phospholipase D/nuclease 11
DNA polymerase beta, N-terminal domain-like PHP domain-like 11
Chitinase insertion domain Carbohydrate-binding domain 11
Thiolase-like FabD/lysophospholipase-like 11
(Trans)glycosidases Beta-D-glucan exohydrolase, C-terminal domain 11
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
SacY-like RNA-binding domain PTS-regulatory domain, PRD 11
NEAT domain-like NEAT domain-like 11
FAD/NAD(P)-binding domain Nitrite and sulphite reductase 4Fe-4S domain-like 11
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 11
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 11
Elongation factor Ts (EF-Ts), dimerisation domain Elongation factor Ts (EF-Ts), dimerisation domain 11
FabD/lysophospholipase-like ACP-like 11
Class II aaRS and biotin synthetases SufE/NifU 11
NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains 11
Histidine-containing phosphotransfer domain, HPT domain CheW-like 11
Histidine-containing phosphotransfer domain, HPT domain CheY-binding domain of CheA 11
FMN-linked oxidoreductases Alpha subunit of glutamate synthase, C-terminal domain 11
Zinc beta-ribbon Prokaryotic SH3-related domain 11
Class II aaRS and biotin synthetases YbaK/ProRS associated domain 11
PIN domain-like DNA/RNA polymerases 11
RuvA domain 2-like DNA helicase RuvA subunit, C-terminal domain 11
lambda repressor-like DNA-binding domains SinR repressor dimerisation domain-like 11
Translation proteins Initiation factor IF2/eIF5b, domain 3 11
Serine metabolism enzymes domain ACT-like 11
alpha/beta-Hydrolases Galactose-binding domain-like 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 11
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
Dihydropteroate synthetase-like Cobalamin (vitamin B12)-binding domain 11
Acyl-CoA N-acyltransferases (Nat) Pentapeptide repeat-like 11
NEAT domain-like Methyl-accepting chemotaxis protein (MCP) signaling domain 11
CoA-dependent acyltransferases NAD(P)-binding Rossmann-fold domains 11
Thioredoxin-like Thioredoxin-like 11
L,D-transpeptidase pre-catalytic domain-like L,D-transpeptidase catalytic domain-like 11
Nucleotide-diphospho-sugar transferases S-adenosyl-L-methionine-dependent methyltransferases 11
Pyruvate-ferredoxin oxidoreductase, PFOR, domain III TK C-terminal domain-like 11
beta-lactamase/transpeptidase-like P-loop containing nucleoside triphosphate hydrolases 11
Aldolase Single hybrid motif 11
Molybdenum cofactor biosynthesis proteins CinA-like 11
TrmE connector domain P-loop containing nucleoside triphosphate hydrolases 11
Thiamin pyrophosphokinase, catalytic domain Thiamin pyrophosphokinase, substrate-binding domain 11
SirA-like Rhodanese/Cell cycle control phosphatase 11
Nucleic acid-binding proteins PheT/TilS domain 11
"Winged helix" DNA-binding domain HprK N-terminal domain-like 11
SH3-domain Cysteine proteinases 11
DnaK suppressor protein DksA, alpha-hairpin domain Glucocorticoid receptor-like (DNA-binding domain) 11
Macro domain-like Zn-dependent exopeptidases 11
UROD/MetE-like UROD/MetE-like 11
Lysozyme-like N-acetylmuramoyl-L-alanine amidase-like 11
GIY-YIG endonuclease C-terminal UvrC-binding domain of UvrB 11
GIY-YIG endonuclease RuvA domain 2-like 11
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 11
PheT/TilS domain Anticodon-binding domain of PheRS 11
Obg GTP-binding protein N-terminal domain Obg GTP-binding protein C-terminal domain 11
DAK1/DegV-like DhaL-like 11
EF-hand EF-hand 11
(Trans)glycosidases Carbohydrate-binding domain 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
Adenine nucleotide alpha hydrolases-like DHS-like NAD/FAD-binding domain 11
Respiratory nitrate reductase 1 gamma chain alpha-helical ferredoxin 11
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 11
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 11
Flavoproteins Riboflavin synthase domain-like 11
P-loop containing nucleoside triphosphate hydrolases Hypothetical protein YjiA, C-terminal domain 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
"Winged helix" DNA-binding domain Iron-dependent repressor protein, dimerization domain 11
YajQ-like YajQ-like 11
Nucleic acid-binding proteins HD-domain/PDEase-like 11
PTS-regulatory domain, PRD PTS system fructose IIA component-like 11
Voltage-gated potassium channels TrkA C-terminal domain-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheW-like 11
Folate-binding domain Aminomethyltransferase beta-barrel domain 11
"Winged helix" DNA-binding domain LexA/Signal peptidase 11
Probable ACP-binding domain of malonyl-CoA ACP transacylase ACP-like 11
GAF domain-like CheY-like 11
4Fe-4S ferredoxins ARM repeat 11
FabD/lysophospholipase-like NAD(P)-binding Rossmann-fold domains 11
Nucleotidyltransferase PHP domain-like 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
Histidine-containing phosphotransfer domain, HPT domain Homodimeric domain of signal transducing histidine kinase 11
Peptide methionine sulfoxide reductase Mss4-like 11
Cupredoxins Cytochrome c 11
CheC-like CheC-like 11
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases CBS-domain pair 11
E set domains alpha/beta-Hydrolases 11
MFS general substrate transporter MFS general substrate transporter 11
PheT/TilS domain Putative DNA-binding domain 11
N-terminal domain of MutM-like DNA repair proteins Glucocorticoid receptor-like (DNA-binding domain) 11
Hypothetical protein SAV1430 ARM repeat 11
PUA domain-like alpha/beta knot 11
Metallo-dependent phosphatases Concanavalin A-like lectins/glucanases 11
Glutathione synthetase ATP-binding domain-like post-HMGL domain-like 11
Prokaryotic type KH domain (KH-domain type II) Prokaryotic type KH domain (KH-domain type II) 11
Cytidine deaminase-like Dihydrofolate reductase-like 11
"Winged helix" DNA-binding domain PTS system IIB component-like 11
TGS-like ACT-like 11
Cytochrome c oxidase subunit II-like, transmembrane region Cytochrome c 11
PTS-regulatory domain, PRD PTS system IIB component-like 11
Methylglyoxal synthase-like Cytidine deaminase-like 11
Homo-oligomeric flavin-containing Cys decarboxylases, HFCD CoaB-like 11
Trigger factor ribosome-binding domain FKBP-like 11
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
NAD(P)-binding Rossmann-fold domains PYP-like sensor domain (PAS domain) 11
LysM domain (Trans)glycosidases 11
Rho N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 11
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 11
Tetrapyrrole methylase all-alpha NTP pyrophosphatases 11
CheY-binding domain of CheA Homodimeric domain of signal transducing histidine kinase 11
P-loop containing nucleoside triphosphate hydrolases CarD-like 11
THUMP domain-like Adenine nucleotide alpha hydrolases-like 11
Pyruvate-ferredoxin oxidoreductase, PFOR, domain III Thiamin diphosphate-binding fold (THDP-binding) 11
DNA ligase/mRNA capping enzyme, catalytic domain RuvA domain 2-like 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
TPR-like HCP-like 11
NAD(P)-binding Rossmann-fold domains Glutamyl tRNA-reductase dimerization domain 11
S13-like H2TH domain Glucocorticoid receptor-like (DNA-binding domain) 11
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 11
MesJ substrate recognition domain-like PheT/TilS domain 11
Periplasmic binding protein-like II ACT-like 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
5' to 3' exonuclease, C-terminal subdomain DNA/RNA polymerases 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11

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