SUPERFAMILY 1.75 HMM library and genome assignments server

Domain combination pairs in Sorangium cellulosum 'So ce 56'

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

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Adjacent domain pairs graph

Graph of adjacent domain pairs.


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Domain combination pairs

1165 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 13068
Protein kinase-like (PK-like) P-loop containing nucleoside triphosphate hydrolases 9353
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 928
P-loop containing nucleoside triphosphate hydrolases TPR-like 6941
Protein kinase-like (PK-like) TPR-like 6739
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 6621
TPR-like TPR-like 6039
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 5539
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 5539
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 5219
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheY-like 5139
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase GAF domain-like 5039
"Winged helix" DNA-binding domain Periplasmic binding protein-like II 482
Homodimeric domain of signal transducing histidine kinase CheY-like 4836
Homodimeric domain of signal transducing histidine kinase GAF domain-like 4636
PYP-like sensor domain (PAS domain) PYP-like sensor domain (PAS domain) 4625
PYP-like sensor domain (PAS domain) SpoIIaa-like 4116
GAF domain-like P-loop containing nucleoside triphosphate hydrolases 3724
SMAD/FHA domain P-loop containing nucleoside triphosphate hydrolases 3410
PYP-like sensor domain (PAS domain) GAF domain-like 3327
PYP-like sensor domain (PAS domain) CheY-like 3324
Thiolase-like Thiolase-like 3116
GAF domain-like Protein kinase-like (PK-like) 3020
SMAD/FHA domain Homeodomain-like 307
Phage tail proteins gp5 N-terminal domain-like 299
GroES-like NAD(P)-binding Rossmann-fold domains 293
Phage tail proteins Phage tail proteins 299
Thioredoxin-like GST C-terminal domain-like 272
Homeodomain-like Tetracyclin repressor-like, C-terminal domain 264
Phage tail proteins Phage fibre proteins 256
gp5 N-terminal domain-like Phage fibre proteins 256
CheY-like P-loop containing nucleoside triphosphate hydrolases 248
CheY-like GAF domain-like 2321
CheY-like Homeodomain-like 235
Actin-like ATPase domain Actin-like ATPase domain 2311
Homeodomain-like Homeodomain-like 196
ACP-like ACP-like 1919
Cytochrome c Cytochrome c 1915
Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase C-terminal domain-like 194
HAMP domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 194
GAF domain-like GAF domain-like 1812
Pentapeptide repeat-like Pentapeptide repeat-like 1810
HAMP domain-like Homodimeric domain of signal transducing histidine kinase 183
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 186
P-loop containing nucleoside triphosphate hydrolases ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 1712
Protein kinase-like (PK-like) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 1611
GAF domain-like SpoIIaa-like 1510
Thiolase-like ACP-like 1515
NAD(P)-binding Rossmann-fold domains ACP-like 1515
P-loop containing nucleoside triphosphate hydrolases Homodimeric domain of signal transducing histidine kinase 1510
Thiolase-like NAD(P)-binding Rossmann-fold domains 1414
Protein kinase-like (PK-like) Homodimeric domain of signal transducing histidine kinase 149
Protein kinase-like (PK-like) Nucleotide cyclase 1412
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 142
CheY-like CheY-like 1312
Composite domain of metallo-dependent hydrolases Metallo-dependent hydrolases 137
NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains 1313
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 133
TSP type-3 repeat OmpA-like 133
Integrin alpha N-terminal domain Integrin alpha N-terminal domain 139
CheY-like C-terminal effector domain of the bipartite response regulators 122
TSP type-3 repeat TSP type-3 repeat 127
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 127
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 126
Protein kinase-like (PK-like) C-type lectin-like 125
Nucleotide cyclase P-loop containing nucleoside triphosphate hydrolases 1212
TPR-like GAF domain-like 128
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 114
Homeodomain-like Ribonuclease H-like 112
Histidine-containing phosphotransfer domain, HPT domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 109
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein S5 domain 2-like 106
ACP-like S-adenosyl-L-methionine-dependent methyltransferases 1010
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 104
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 108
S-adenosyl-L-methionine-dependent methyltransferases Thiolase-like 1010
ARM repeat ARM repeat 108
GAF domain-like Homeodomain-like 106
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 108
CoA-dependent acyltransferases ACP-like 99
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 93
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB transmembrane domain 95
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB transmembrane domain 95
CoA-dependent acyltransferases CoA-dependent acyltransferases 99
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 95
P-loop containing nucleoside triphosphate hydrolases WD40 repeat-like 99
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 95
Protein kinase-like (PK-like) PYP-like sensor domain (PAS domain) 95
Calcium ATPase, transduction domain A HAD-like 96
CoA-dependent acyltransferases Acetyl-CoA synthetase-like 99
P-loop containing nucleoside triphosphate hydrolases PYP-like sensor domain (PAS domain) 95
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 94
Cupredoxins Cupredoxins 95
Acetyl-CoA synthetase-like ACP-like 99
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 95
Periplasmic binding protein-like I SpoIIaa-like 94
Formate dehydrogenase/DMSO reductase, domains 1-3 ADC-like 83
NAD(P)-binding Rossmann-fold domains S-adenosyl-L-methionine-dependent methyltransferases 88
Nucleotide cyclase TPR-like 88
P-loop containing nucleoside triphosphate hydrolases Translation proteins 85
(Trans)glycosidases Glycosyl hydrolase domain 87
Protein kinase-like (PK-like) SpoIIaa-like 84
P-loop containing nucleoside triphosphate hydrolases SpoIIaa-like 84
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 74
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 74
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 72
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 74
TolA/TonB C-terminal domain Porins 76
WD40 repeat-like WD40 repeat-like 77
ClpP/crotonase ClpP/crotonase 73
Phage fibre proteins Phage fibre proteins 72
HAD-like Calcium ATPase, transmembrane domain M 74
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 74
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 72
RmlC-like cupins Homeodomain-like 73
CheY-like Nucleotide cyclase 75
Nucleic acid-binding proteins Nucleic acid-binding proteins 77
Histidine-containing phosphotransfer domain, HPT domain Homodimeric domain of signal transducing histidine kinase 76
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 63
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Adenine nucleotide alpha hydrolases-like 61
E set domains (Trans)glycosidases 65
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 62
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 61
Periplasmic binding protein-like I PP2C-like 62
ACP-like alpha/beta-Hydrolases 66
Thiolase-like FabD/lysophospholipase-like 66
SMAD/FHA domain SMAD/FHA domain 63
Protein kinase-like (PK-like) CheY-like 64
Pectin lyase-like Pectin lyase-like 65
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 63
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 62
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 64
PreATP-grasp domain Rudiment single hybrid motif 63
P-loop containing nucleoside triphosphate hydrolases MOP-like 61
PHM/PNGase F PHM/PNGase F 62
Acetyl-CoA synthetase-like Acetyl-CoA synthetase-like 66
Phospholipase D/nuclease Phospholipase D/nuclease 63
TPR-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 52
Enolase N-terminal domain-like Enolase C-terminal domain-like 52
Metal cation-transporting ATPase, ATP-binding domain N HAD-like 52
Translation proteins EF-G C-terminal domain-like 53
lambda repressor-like DNA-binding domains Periplasmic binding protein-like I 52
Calcium ATPase, transduction domain A Metal cation-transporting ATPase, ATP-binding domain N 52
Starch-binding domain-like Starch-binding domain-like 55
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 53
ACT-like ACT-like 53
Thiolase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 55
Sm-like ribonucleoproteins Mechanosensitive channel protein MscS (YggB), C-terminal domain 53
Histidine-containing phosphotransfer domain, HPT domain CheY-like 55
PurM N-terminal domain-like PurM C-terminal domain-like 52
TPR-like Homeodomain-like 54
PUA domain-like Ribosomal protein S5 domain 2-like 53
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 53
Toll/Interleukin receptor TIR domain P-loop containing nucleoside triphosphate hydrolases 55
Homodimeric domain of signal transducing histidine kinase Homodimeric domain of signal transducing histidine kinase 55
Carboxypeptidase regulatory domain-like Starch-binding domain-like 55
FabD/lysophospholipase-like ACP-like 55
RCC1/BLIP-II RCC1/BLIP-II 54
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 53
TPR-like Homodimeric domain of signal transducing histidine kinase 52
Histidine-containing phosphotransfer domain, HPT domain CheW-like 54
cAMP-binding domain-like "Winged helix" DNA-binding domain 52
Chemotaxis receptor methyltransferase CheR, N-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 53
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 54
"Winged helix" DNA-binding domain PLP-dependent transferases 51
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheW-like 54
Thioesterase/thiol ester dehydrase-isomerase Thioesterase/thiol ester dehydrase-isomerase 52
EF-G C-terminal domain-like EF-G C-terminal domain-like 53
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 55
Triger factor/SurA peptide-binding domain-like FKBP-like 54
Trypsin-like serine proteases PDZ domain-like 53
SMAD/FHA domain Nucleotide cyclase 53
FabD/lysophospholipase-like NAD(P)-binding Rossmann-fold domains 44
Methyl-accepting chemotaxis protein (MCP) signaling domain Methyl-accepting chemotaxis protein (MCP) signaling domain 44
Metal cation-transporting ATPase, ATP-binding domain N Calcium ATPase, transmembrane domain M 41
Galactose mutarotase-like Six-hairpin glycosidases 43
Metallo-dependent phosphatases 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain 43
PLP-binding barrel Alanine racemase C-terminal domain-like 43
Protein kinase-like (PK-like) Homeodomain-like 43
L domain-like L domain-like 44
YVTN repeat-like/Quinoprotein amine dehydrogenase Cytochrome c 43
PDZ domain-like ClpP/crotonase 42
CheY-like SpoIIaa-like 43
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 44
Acetyl-CoA synthetase-like alpha/beta-Hydrolases 44
Carboxypeptidase regulatory domain-like Carboxypeptidase regulatory domain-like 44
Sigma3 and sigma4 domains of RNA polymerase sigma factors NTF2-like 41
Probable ACP-binding domain of malonyl-CoA ACP transacylase NAD(P)-binding Rossmann-fold domains 44
TPR-like PYP-like sensor domain (PAS domain) 41
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 44
Homodimeric domain of signal transducing histidine kinase CheW-like 43
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 44
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 42
Kelch motif Galactose oxidase, central domain 44
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 42
CoA-dependent acyltransferases alpha/beta-Hydrolases 44
Protein kinase-like (PK-like) Protein kinase-like (PK-like) 44
Probable ACP-binding domain of malonyl-CoA ACP transacylase ACP-like 44
Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), C-terminal domain 42
Arabinanase/levansucrase/invertase Galactose-binding domain-like 42
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 42
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 44
E set domains Glycosyl hydrolase domain 44
Kazal-type serine protease inhibitors Kazal-type serine protease inhibitors 43
Thioredoxin-like Thioredoxin-like 43
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 41
SMAD/FHA domain GAF domain-like 43
S-adenosyl-L-methionine-dependent methyltransferases alpha/beta-Hydrolases 44
Thioredoxin-like FAD/NAD(P)-binding domain 42
"Winged helix" DNA-binding domain S-adenosyl-L-methionine-dependent methyltransferases 42
Arabinanase/levansucrase/invertase Concanavalin A-like lectins/glucanases 43
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 42
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 44
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 42
HCP-like HCP-like 43
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 42
Thiolase-like alpha/beta-Hydrolases 44
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 42
Leukotriene A4 hydrolase N-terminal domain Metalloproteases ("zincins"), catalytic domain 42
Sigma2 domain of RNA polymerase sigma factors NTF2-like 41
2Fe-2S ferredoxin-like CO dehydrogenase ISP C-domain like 31
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 33
Class I glutamine amidotransferase-like Homeodomain-like 31
CBS-domain pair FAD-binding/transporter-associated domain-like 31
TPR-like Porins 33
Acetyl-CoA synthetase-like Thiolase-like 33
Nitrous oxide reductase, N-terminal domain Cytochrome c 33
Single hybrid motif CoA-dependent acyltransferases 32
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 32
EF-G C-terminal domain-like Ribosomal protein S5 domain 2-like 31
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 31
CheY-like EspE N-terminal domain-like 33
PDZ domain-like PDZ domain-like 33
lambda repressor-like DNA-binding domains RmlC-like cupins 31
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 32
Single hybrid motif Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 32
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 32
ISP domain Bet v1-like 31
HlyD-like secretion proteins HlyD-like secretion proteins 33
NHL repeat NHL repeat 32
Carboxypeptidase regulatory domain-like PDZ domain-like 33
Alpha-L RNA-binding motif Pseudouridine synthase 32
Starch-binding domain-like PDZ domain-like 33
Lysozyme-like beta-lactamase/transpeptidase-like 33
(Trans)glycosidases Beta-D-glucan exohydrolase, C-terminal domain 33
Folate-binding domain Aminomethyltransferase beta-barrel domain 31
GAF domain-like Periplasmic binding protein-like I 32
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex CoA-dependent acyltransferases 32
Ribonuclease H-like DNA/RNA polymerases 32
Adenine nucleotide alpha hydrolases-like Adenine nucleotide alpha hydrolases-like 32
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 33
Protein kinase-like (PK-like) WD40 repeat-like 33
lambda integrase-like, N-terminal domain DNA breaking-rejoining enzymes 32
Cobalamin (vitamin B12)-binding domain Radical SAM enzymes 32
PEP carboxykinase N-terminal domain PEP carboxykinase-like 32
Formate dehydrogenase/DMSO reductase, domains 1-3 4Fe-4S ferredoxins 32
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 32
MurCD N-terminal domain MurD-like peptide ligases, catalytic domain 31
NAD(P)-binding Rossmann-fold domains ACT-like 32
Acetyl-CoA synthetase-like NAD(P)-binding Rossmann-fold domains 33
E set domains E set domains 33
S-adenosyl-L-methionine-dependent methyltransferases FabD/lysophospholipase-like 33
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 31
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 33
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphohistidine domain 33
CoA-dependent acyltransferases Thiolase-like 33
S-adenosyl-L-methionine-dependent methyltransferases S-adenosyl-L-methionine-dependent methyltransferases 33
vWA-like Class I glutamine amidotransferase-like 32
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 32
Methionyl-tRNA synthetase (MetRS), Zn-domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 32
Pentapeptide repeat-like WD40 repeat-like 33
Methionine synthase domain Cobalamin (vitamin B12)-binding domain 32
Periplasmic binding protein-like II MetI-like 33
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 31
DPP6 N-terminal domain-like DPP6 N-terminal domain-like 33
Oligoxyloglucan reducing end-specific cellobiohydrolase Oligoxyloglucan reducing end-specific cellobiohydrolase 33
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleotidylyl transferase 32
RuvA domain 2-like Nucleic acid-binding proteins 33
Formyltransferase FMT C-terminal domain-like 32
Cytochrome c PHM/PNGase F 31
Periplasmic binding protein-like II ACT-like 32
Protease propeptides/inhibitors Subtilisin-like 32
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 31
CheY-like Methylesterase CheB, C-terminal domain 32
Class II aaRS and biotin synthetases Class II aaRS ABD-related 33
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 33
Carbamate kinase-like ACT-like 32
Translation proteins Ribosomal protein S5 domain 2-like 31
Purine and uridine phosphorylases P-loop containing nucleoside triphosphate hydrolases 33
Regulatory protein AraC Homeodomain-like 33
MurCD N-terminal domain MurD-like peptide ligases, peptide-binding domain 31
P-loop containing nucleoside triphosphate hydrolases C-type lectin-like 31
Chaperone J-domain HSP40/DnaJ peptide-binding domain 32
P-loop containing nucleoside triphosphate hydrolases Pentapeptide repeat-like 33
Peptidase/esterase 'gauge' domain alpha/beta-Hydrolases 32
HD-domain/PDEase-like Nucleotidyltransferase 22
TPR-like SpoIIaa-like 22
Purine and uridine phosphorylases WD40 repeat-like 22
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 21
Nucleotidyltransferase Nucleotidyltransferase substrate binding subunit/domain 22
Nucleotide-diphospho-sugar transferases TPR-like 22
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 22
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 21
NAD(P)-binding Rossmann-fold domains ClpP/crotonase 22
Protein kinase-like (PK-like) SMAD/FHA domain 21
S-adenosyl-L-methionine-dependent methyltransferases Probable ACP-binding domain of malonyl-CoA ACP transacylase 22
Periplasmic binding protein-like II Periplasmic binding protein-like II 21
PP2C-like cAMP-binding domain-like 22
Acetyl-CoA synthetase-like FabD/lysophospholipase-like 22
Acyl-CoA N-acyltransferases (Nat) S-adenosyl-L-methionine-dependent methyltransferases 22
Succinyl-CoA synthetase domains Glutathione synthetase ATP-binding domain-like 22
Growth factor receptor domain YVTN repeat-like/Quinoprotein amine dehydrogenase 22
Multiheme cytochromes Cytochrome c 22
Quinoprotein alcohol dehydrogenase-like Pentapeptide repeat-like 22
Methyl-accepting chemotaxis protein (MCP) signaling domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 22
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 21
Toll/Interleukin receptor TIR domain TPR-like 22
S-adenosyl-L-methionine-dependent methyltransferases PYP-like sensor domain (PAS domain) 22
Dihydropteroate synthetase-like Cobalamin (vitamin B12)-binding domain 21
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 21
CBS-domain pair MgtE membrane domain-like 21
Methylesterase CheB, C-terminal domain PYP-like sensor domain (PAS domain) 22
Acyl-CoA N-acyltransferases (Nat) SCP-like 22
Homocysteine S-methyltransferase Dihydropteroate synthetase-like 21
HD-domain/PDEase-like ACT-like 22
Acetyl-CoA synthetase-like S-adenosyl-L-methionine-dependent methyltransferases 22
MoeA N-terminal region -like Molybdenum cofactor biosynthesis proteins 21
2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain Alkaline phosphatase-like 21
P-loop containing nucleoside triphosphate hydrolases Metallo-dependent phosphatases 22
Galactose oxidase, central domain Galactose oxidase, central domain 22
Molybdenum cofactor biosynthesis proteins MoeA C-terminal domain-like 21
Tryptophan synthase beta subunit-like PLP-dependent enzymes CBS-domain pair 21
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 22
PUA domain-like Nucleotidylyl transferase 21
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Nucleic acid-binding proteins 22
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 22
Methyl-accepting chemotaxis protein (MCP) signaling domain GAF domain-like 22
Aconitase iron-sulfur domain LeuD/IlvD-like 22
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 21
Chorismate mutase II Periplasmic binding protein-like II 21
Trypsin-like serine proteases P-loop containing nucleoside triphosphate hydrolases 22
vWA-like vWA-like 21
Hedgehog/DD-peptidase LysM domain 22
P-loop containing nucleoside triphosphate hydrolases DPP6 N-terminal domain-like 22
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 22
Methylated DNA-protein cysteine methyltransferase domain Methylated DNA-protein cysteine methyltransferase, C-terminal domain 22
Homocysteine S-methyltransferase Methionine synthase domain 21
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphoenolpyruvate/pyruvate domain 22
Phage tail proteins PGBD-like 21
Homocysteine S-methyltransferase Cobalamin (vitamin B12)-binding domain 21
Hypothetical protein PA1324 Hypothetical protein PA1324 21
GroEL equatorial domain-like GroEL-intermediate domain like 21
YrdC/RibB RibA-like 21
Sialidases Oligoxyloglucan reducing end-specific cellobiohydrolase 22
Quinoprotein alcohol dehydrogenase-like WD40 repeat-like 22
Nucleotidyltransferase ACT-like 22
E set domains Six-hairpin glycosidases 22
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 22
Chorismate mutase II ACT-like 21
Carbohydrate-binding domain alpha/beta-Hydrolases 22
Carboxypeptidase regulatory domain-like Porins 22
FAD/NAD(P)-binding domain Nitrite and sulphite reductase 4Fe-4S domain-like 22
Kelch motif Kelch motif 22
Dihydropteroate synthetase-like Methionine synthase activation domain-like 21
MoeA N-terminal region -like MoeA C-terminal domain-like 21
Methylesterase CheB, C-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 22
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 21
GAF domain-like Nucleotide cyclase 22
Methyl-accepting chemotaxis protein (MCP) signaling domain CheY-like 22
TSP type-3 repeat Lamin A/C globular tail domain 22
DPP6 N-terminal domain-like alpha/beta-Hydrolases 22
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 21
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 21
DnaK suppressor protein DksA, alpha-hairpin domain Glucocorticoid receptor-like (DNA-binding domain) 21
Acyl-CoA N-acyltransferases (Nat) Acyl-CoA N-acyltransferases (Nat) 22
Phage fibre proteins PGBD-like 21
EspE N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 21
Glutathione synthetase ATP-binding domain-like Single hybrid motif 22
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 22
Methionine synthase domain Methionine synthase activation domain-like 21
Homocysteine S-methyltransferase Methionine synthase activation domain-like 21
Chemotaxis receptor methyltransferase CheR, N-terminal domain PYP-like sensor domain (PAS domain) 22
Chaperone J-domain TPR-like 22
Methylesterase CheB, C-terminal domain Chemotaxis receptor methyltransferase CheR, N-terminal domain 22
ThrRS/AlaRS common domain Class II aaRS and biotin synthetases 22
TrkA C-terminal domain-like TrkA C-terminal domain-like 21
TROVE domain-like vWA-like 21
Thioesterase/thiol ester dehydrase-isomerase Thiolase-like 22
Penicillin binding protein dimerisation domain beta-lactamase/transpeptidase-like 22
Concanavalin A-like lectins/glucanases Galactose-binding domain-like 22
FAD/NAD(P)-binding domain Nitrite/Sulfite reductase N-terminal domain-like 22
6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 21
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 21
P-loop containing nucleoside triphosphate hydrolases Nucleotidylyl transferase 21
Galactose mutarotase-like (Trans)glycosidases 22
6-phosphogluconate dehydrogenase C-terminal domain-like ClpP/crotonase 22
Methyl-accepting chemotaxis protein (MCP) signaling domain Homodimeric domain of signal transducing histidine kinase 22
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 22
Thioredoxin-like Rhodanese/Cell cycle control phosphatase 22
NAD(P)-binding Rossmann-fold domains alpha/beta-Hydrolases 22
Nucleotidylyl transferase Nucleic acid-binding proteins 22
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 22
Cupredoxins Cytochrome c 22
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 22
cAMP-binding domain-like cAMP-binding domain-like 22
Nucleotide-binding domain FAD-linked reductases, C-terminal domain 21
CoA-dependent acyltransferases NAD(P)-binding Rossmann-fold domains 22
alpha-helical ferredoxin Nucleotide-binding domain 22
PreATP-grasp domain Single hybrid motif 22
GroEL-intermediate domain like GroEL apical domain-like 21
CoA-dependent acyltransferases S-adenosyl-L-methionine-dependent methyltransferases 22
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 21
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 22
FabD/lysophospholipase-like alpha/beta-Hydrolases 22
Nucleic acid-binding proteins Translation proteins SH3-like domain 22
UDP-Glycosyltransferase/glycogen phosphorylase HAD-like 21
Translation proteins ThrRS/AlaRS common domain 22
MgtE N-terminal domain-like MgtE membrane domain-like 21
DHS-like NAD/FAD-binding domain Toll/Interleukin receptor TIR domain 22
Clc chloride channel CBS-domain pair 21
Starch-binding domain-like Porins 21
GroEL equatorial domain-like GroEL apical domain-like 21
"Winged helix" DNA-binding domain GAF domain-like 21
gp5 N-terminal domain-like PGBD-like 21
Rudiment single hybrid motif Single hybrid motif 22
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 21
ADC-like 4Fe-4S ferredoxins 21
DNase I-like Lamin A/C globular tail domain 22
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 21
DPP6 N-terminal domain-like NHL repeat 22
HD-domain/PDEase-like P-loop containing nucleoside triphosphate hydrolases 22
Nucleotidyltransferase Poly A polymerase C-terminal region-like 21
2Fe-2S ferredoxin-like alpha-helical ferredoxin 21
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 21
lambda repressor-like DNA-binding domains P-loop containing nucleoside triphosphate hydrolases 22
Bet v1-like Dimeric alpha+beta barrel 22
GreA transcript cleavage protein, N-terminal domain FKBP-like 21
Carbohydrate-binding domain Concanavalin A-like lectins/glucanases 22
Toll/Interleukin receptor TIR domain Protein kinase-like (PK-like) 22
Pseudouridine synthase S-adenosyl-L-methionine-dependent methyltransferases 22
NAD(P)-binding Rossmann-fold domains UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 21
Formate/glycerate dehydrogenase catalytic domain-like ACT-like 21
Dihydropteroate synthetase-like Methionine synthase domain 21
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 22
6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 22
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 22
Glutathione synthetase ATP-binding domain-like Phosphoenolpyruvate/pyruvate domain 22
MgtE N-terminal domain-like CBS-domain pair 21
Phospholipase D/nuclease P-loop containing nucleoside triphosphate hydrolases 22
PreATP-grasp domain PreATP-grasp domain 22
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
Cobalamin (vitamin B12)-binding domain Methionine synthase activation domain-like 21
Protein kinase-like (PK-like) Tricorn protease domain 2 22
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 22
CO dehydrogenase molybdoprotein N-domain-like Molybdenum cofactor-binding domain 22
NAD(P)-binding Rossmann-fold domains TrkA C-terminal domain-like 21
Nucleotide cyclase Nucleotide cyclase 22
TPR-like Lysozyme-like 22
TPR-like OMPA-like 22
CheY-like HD-domain/PDEase-like 22
Galactose oxidase, central domain TSP type-3 repeat 22
MOSC N-terminal domain-like PK beta-barrel domain-like 21
Kelch motif TSP type-3 repeat 22
FabD/lysophospholipase-like FabD/lysophospholipase-like 22
Arabinanase/levansucrase/invertase Ricin B-like lectins 22
tRNA-binding arm Class II aaRS and biotin synthetases 21
Lysozyme-like LysM domain 22
Purine and uridine phosphorylases Pentapeptide repeat-like 22
vWA-like TPR-like 22
HAMP domain-like CheY-like 21
CoA-dependent acyltransferases FabD/lysophospholipase-like 22
ADC synthase Class I glutamine amidotransferase-like 22
C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase Cytochrome c 22
Barwin-like endoglucanases PHL pollen allergen 22
FAD-binding/transporter-associated domain-like alpha-helical ferredoxin 11
Lysozyme-like LuxS/MPP-like metallohydrolase 11
Metalloproteases ("zincins"), catalytic domain Integrin alpha N-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases TGS-like 11
C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase YWTD domain 11
CoA-dependent acyltransferases FMN-dependent nitroreductase-like 11
alpha-D-mannose-specific plant lectins Integrin alpha N-terminal domain 11
Acetyl-CoA synthetase-like Glycerol-3-phosphate (1)-acyltransferase 11
"Winged helix" DNA-binding domain GIY-YIG endonuclease 11
Nudix Nudix 11
Purine and uridine phosphorylases MCP/YpsA-like 11
Fibronectin type III Concanavalin A-like lectins/glucanases 11
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) Homeodomain-like 11
Rudiment single hybrid motif PH0987 N-terminal domain-like 11
FMN-linked oxidoreductases Alpha subunit of glutamate synthase, C-terminal domain 11
PTS system fructose IIA component-like Phosphoenolpyruvate/pyruvate domain 11
LigT-like Nucleotidyltransferase 11
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 11
CheW-like CheY-like 11
5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain EF-hand 11
Carbon-nitrogen hydrolase P-loop containing nucleoside triphosphate hydrolases 11
Prokaryotic type KH domain (KH-domain type II) Rad51 N-terminal domain-like 11
Nucleotidyltransferase TGS-like 11
Helical scaffold and wing domains of SecA Helical scaffold and wing domains of SecA 11
S-adenosyl-L-methionine-dependent methyltransferases Homodimeric domain of signal transducing histidine kinase 11
Methylesterase CheB, C-terminal domain Homodimeric domain of signal transducing histidine kinase 11
Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases 11
Elongation factor Ts (EF-Ts), dimerisation domain Elongation factor Ts (EF-Ts), dimerisation domain 11
Carbon-nitrogen hydrolase TPR-like 11
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 11
PTS system fructose IIA component-like HPr-like 11
Galactose oxidase, central domain E set domains 11
Carbamate kinase-like PUA domain-like 11
NagB/RpiA/CoA transferase-like NagB/RpiA/CoA transferase-like 11
cAMP-binding domain-like S-adenosyl-L-methionine-dependent methyltransferases 11
NAD(P)-binding Rossmann-fold domains Glutathione synthetase ATP-binding domain-like 11
PIN domain-like Ribonuclease H-like 11
Protein kinase-like (PK-like) ARM repeat 11
Ribosomal protein S5 domain 2-like HSP90 C-terminal domain 11
post-HMGL domain-like 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 11
Periplasmic binding protein-like II NosL/MerB-like 11
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Fe-S cluster assembly (FSCA) domain-like P-loop containing nucleoside triphosphate hydrolases 11
PYP-like sensor domain (PAS domain) Nucleotide cyclase 11
Nucleic acid-binding proteins BRCT domain 11
NHL repeat Quinoprotein alcohol dehydrogenase-like 11
TPR-like MCP/YpsA-like 11
SpoIIaa-like PDZ domain-like 11
WD40 repeat-like Toll/Interleukin receptor TIR domain 11
NAD(P)-binding Rossmann-fold domains Ferredoxin reductase-like, C-terminal NADP-linked domain 11
Carboxypeptidase regulatory domain-like Metallo-dependent phosphatases 11
Sec63 N-terminal domain-like PHP domain-like 11
NAD(P)-binding Rossmann-fold domains Siroheme synthase middle domains-like 11
Transcription factor NusA, N-terminal domain Nucleic acid-binding proteins 11
Cytochrome c Periplasmic binding protein-like I 11
Glutamine synthetase/guanido kinase CBS-domain pair 11
Nucleic acid-binding proteins Anticodon-binding domain of PheRS 11
Nucleotide-diphospho-sugar transferases Acetyl-CoA synthetase-like 11
Ligand-binding domain in the NO signalling and Golgi transport Homeodomain-like 11
"Winged helix" DNA-binding domain GntR ligand-binding domain-like 11
Multiheme cytochromes TPR-like 11
beta-N-acetylhexosaminidase-like domain (Trans)glycosidases 11
Toll/Interleukin receptor TIR domain DPP6 N-terminal domain-like 11
Riboflavin synthase domain-like Riboflavin synthase domain-like 11
Protein kinase-like (PK-like) alpha/beta-Hydrolases 11
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 11
Nitrite and sulphite reductase 4Fe-4S domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 11
NagB/RpiA/CoA transferase-like D-ribose-5-phosphate isomerase (RpiA), lid domain 11
Succinyl-CoA synthetase domains Succinyl-CoA synthetase domains 11
Succinyl-CoA synthetase domains Acyl-CoA N-acyltransferases (Nat) 11
NAD(P)-binding Rossmann-fold domains Acyl-CoA N-acyltransferases (Nat) 11
Nucleotidyltransferase substrate binding subunit/domain HD-domain/PDEase-like 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
PurS-like FGAM synthase PurL, linker domain 11
Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Pyrimidine nucleoside phosphorylase C-terminal domain 11
Subtilisin-like PA domain 11
PHP14-like Phospholipase D/nuclease 11
P-loop containing nucleoside triphosphate hydrolases HRDC-like 11
Carboxypeptidase regulatory domain-like Galactose-binding domain-like 11
YVTN repeat-like/Quinoprotein amine dehydrogenase YVTN repeat-like/Quinoprotein amine dehydrogenase 11
Fucose-specific lectin Galactose oxidase, central domain 11
Galactose-binding domain-like Chondroitin AC/alginate lyase 11
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 11
PTS system fructose IIA component-like Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 11
Diaminopimelate epimerase-like Diaminopimelate epimerase-like 11
Metallo-dependent hydrolases Lamin A/C globular tail domain 11
C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase Nitrous oxide reductase, N-terminal domain 11
ATP-dependent DNA ligase DNA-binding domain Nucleic acid-binding proteins 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
Cysteine proteinases PGBD-like 11
Flavoproteins NTF2-like 11
Cna protein B-type domain PDZ domain-like 11
Acetyl-CoA synthetase-like Clavaminate synthase-like 11
Quinoprotein alcohol dehydrogenase-like P-loop containing nucleoside triphosphate hydrolases 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
PurM C-terminal domain-like Class I glutamine amidotransferase-like 11
Carbohydrate-binding domain Fibronectin type III 11
Nucleotidyltransferase substrate binding subunit/domain Nucleotidyltransferase substrate binding subunit/domain 11
Trypsin-like serine proteases YVTN repeat-like/Quinoprotein amine dehydrogenase 11
P-loop containing nucleoside triphosphate hydrolases MCP/YpsA-like 11
GAF domain-like HD-domain/PDEase-like 11
Nucleotidyltransferase substrate binding subunit/domain ACT-like 11
Galactose-binding domain-like Pectin lyase-like 11
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 11
Cyclophilin-like PH0987 N-terminal domain-like 11
HD-domain/PDEase-like TGS-like 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
D-lysine 5,6-aminomutase beta subunit KamE, N-terminal domain Cobalamin (vitamin B12)-binding domain 11
SpoIIaa-like cAMP-binding domain-like 11
YVTN repeat-like/Quinoprotein amine dehydrogenase Thioredoxin-like 11
DNA methylase specificity domain DNA methylase specificity domain 11
Nucleotide-binding domain Ferredoxin reductase-like, C-terminal NADP-linked domain 11
PHP domain-like P-loop containing nucleoside triphosphate hydrolases 11
Nucleotidyltransferase PAP/OAS1 substrate-binding domain 11
Cytochrome c oxidase subunit II-like, transmembrane region Cupredoxins 11
Zinc beta-ribbon DNA primase core 11
TSP type-3 repeat NHL repeat 11
Nqo1 FMN-binding domain-like Nqo1C-terminal domain-like 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) TATA-box binding protein-like 11
GroES-like Thiolase-like 11
Glutamine synthetase/guanido kinase GatB/YqeY motif 11
Galactose-binding domain-like (Trans)glycosidases 11
Fucose-specific lectin Fucose-specific lectin 11
Metallo-hydrolase/oxidoreductase Rhodanese/Cell cycle control phosphatase 11
YjeF N-terminal domain-like Ribokinase-like 11
ACP-like Clavaminate synthase-like 11
HisI-like all-alpha NTP pyrophosphatases 11
Aldolase post-HMGL domain-like 11
Ribonuclease H-like Nucleic acid-binding proteins 11
Heme oxygenase-like RmlC-like cupins 11
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 11
Cna protein B-type domain Starch-binding domain-like 11
Protein kinase-like (PK-like) Cytochrome c 11
P-loop containing nucleoside triphosphate hydrolases Adenine nucleotide alpha hydrolases-like 11
(Trans)glycosidases NAD(P)-binding Rossmann-fold domains 11
MFS general substrate transporter cAMP-binding domain-like 11
Multiheme cytochromes 4Fe-4S ferredoxins 11
Glutathione synthetase ATP-binding domain-like Acyl-CoA N-acyltransferases (Nat) 11
P-loop containing nucleoside triphosphate hydrolases NHL repeat 11
Nucleotide-diphospho-sugar transferases Guanosine diphospho-D-mannose pyrophosphorylase/mannose-6-phosphate isomerase linker domain 11
Metallo-dependent phosphatases Galactose-binding domain-like 11
HPr-like Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 11
P-loop containing nucleoside triphosphate hydrolases YVTN repeat-like/Quinoprotein amine dehydrogenase 11
NAD(P)-binding Rossmann-fold domains EF-hand 11
"Winged helix" DNA-binding domain SCP-like 11
TPR-like Cysteine proteinases 11
Heme-dependent catalase-like Class I glutamine amidotransferase-like 11
FAD/NAD(P)-binding domain FMN-linked oxidoreductases 11
TPR-like Metalloproteases ("zincins"), catalytic domain 11
Nucleic acid-binding proteins ArfGap/RecO-like zinc finger 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
YWTD domain Calcium-dependent phosphotriesterase 11
FucI/AraA N-terminal and middle domains FucI/AraA C-terminal domain-like 11
Ricin B-like lectins alpha/beta-Hydrolases 11
NAD(P)-linked oxidoreductase RNI-like 11
Chemotaxis receptor methyltransferase CheR, N-terminal domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
ACP-like FMN-dependent nitroreductase-like 11
SMAD/FHA domain Trypsin-like serine proteases 11
Translation proteins Initiation factor IF2/eIF5b, domain 3 11
Cobalamin (vitamin B12)-binding domain TPR-like 11
Macro domain-like Zn-dependent exopeptidases 11
lambda repressor-like DNA-binding domains Phoshotransferase/anion transport protein 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
Ferredoxin reductase-like, C-terminal NADP-linked domain Nitric oxide (NO) synthase oxygenase domain 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain ACT-like 11
DNase I-like TSP type-3 repeat 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Cysteine proteinases 11
4Fe-4S ferredoxins FAD/NAD(P)-binding domain 11
Carbohydrate-binding domain Glycoside hydrolase/deacetylase 11
Toll/Interleukin receptor TIR domain C-type lectin-like 11
Globin-like PYP-like sensor domain (PAS domain) 11
GAF domain-like ARM repeat 11
SMAD/FHA domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Methylated DNA-protein cysteine methyltransferase, C-terminal domain DNA-glycosylase 11
2Fe-2S ferredoxin-like Ferredoxin reductase-like, C-terminal NADP-linked domain 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
GAF domain-like PP2C-like 11
Cytochrome c oxidase subunit II-like, transmembrane region Cytochrome c 11
NAD(P)-binding Rossmann-fold domains Chorismate mutase II 11
FAD-linked oxidases, C-terminal domain alpha-helical ferredoxin 11
Calcium-dependent phosphotriesterase Tricorn protease domain 2 11
Zinc beta-ribbon Zinc beta-ribbon 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 11
P-loop containing nucleoside triphosphate hydrolases Dehydroquinate synthase-like 11
NAD(P)-linked oxidoreductase HAD-like 11
AraD/HMP-PK domain-like NAD(P)-binding Rossmann-fold domains 11
S-adenosyl-L-methionine-dependent methyltransferases CheY-like 11
Quinoprotein alcohol dehydrogenase-like YVTN repeat-like/Quinoprotein amine dehydrogenase 11
Class I glutamine amidotransferase-like LD-carboxypeptidase A C-terminal domain-like 11
YlxR-like L30e-like 11
Nucleotide-binding domain Riboflavin synthase domain-like 11
Cna protein B-type domain Porins 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 11
Probable ACP-binding domain of malonyl-CoA ACP transacylase alpha/beta-Hydrolases 11
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 11
GIY-YIG endonuclease RuvA domain 2-like 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
Carbon-nitrogen hydrolase WD40 repeat-like 11
P-loop containing nucleoside triphosphate hydrolases HAD-like 11
Tetrapyrrole methylase S-adenosyl-L-methionine-dependent methyltransferases 11
Ribonuclease H-like RuvA domain 2-like 11
EspE N-terminal domain-like TPR-like 11
PA domain PDZ domain-like 11
ARM repeat cAMP-binding domain-like 11
Double Clp-N motif ClpS-like 11
PYP-like sensor domain (PAS domain) EAL domain-like 11
PurS-like Class I glutamine amidotransferase-like 11
Carbohydrate binding domain (Trans)glycosidases 11
Toll/Interleukin receptor TIR domain NHL repeat 11
GroES-like alpha/beta-Hydrolases 11
Phosphoenolpyruvate/pyruvate domain Nucleotide-diphospho-sugar transferases 11
"Winged helix" DNA-binding domain NagB/RpiA/CoA transferase-like 11
GroES-like S-adenosyl-L-methionine-dependent methyltransferases 11
Protein kinase-like (PK-like) Globin-like 11
L9 N-domain-like Ribosomal protein L9 C-domain 11
Tex N-terminal region-like RuvA domain 2-like 11
Metallo-dependent phosphatases EF-hand 11
DNA topoisomerase I domain DNA breaking-rejoining enzymes 11
Bacterial luciferase-like alpha/beta-Hydrolases 11
LysM domain LysM domain 11
Terpenoid cyclases/Protein prenyltransferases Terpenoid cyclases/Protein prenyltransferases 11
Globin-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
TolA/TonB C-terminal domain Cna protein B-type domain 11
Carbon-nitrogen hydrolase Quinoprotein alcohol dehydrogenase-like 11
RBP11-like subunits of RNA polymerase C-terminal domain of RNA polymerase alpha subunit 11
ACT-like Formyltransferase 11
Homeodomain-like TATA-box binding protein-like 11
HMA, heavy metal-associated domain HAD-like 11
TolB, N-terminal domain DPP6 N-terminal domain-like 11
TGS-like Class II aaRS ABD-related 11
a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Cytochrome c 11
Porins OMPA-like 11
Nqo1 FMN-binding domain-like Nqo1 middle domain-like 11
Ribosome binding protein Y (YfiA homologue) Nucleic acid-binding proteins 11
FabD/lysophospholipase-like Inosine monophosphate dehydrogenase (IMPDH) 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
FAD-binding/transporter-associated domain-like FAD-binding/transporter-associated domain-like 11
EspE N-terminal domain-like HD-domain/PDEase-like 11
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 11
PreATP-grasp domain Cyclophilin-like 11
Ribbon-helix-helix ACT-like 11
CalX-like AbfB domain 11
DNA-glycosylase Nudix 11
Metallo-dependent hydrolases TSP type-3 repeat 11
cAMP-binding domain-like 4Fe-4S ferredoxins 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) DNA-glycosylase 11
S-adenosyl-L-methionine-dependent methyltransferases ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
TPR-like TRAP-like 11
FAD-binding/transporter-associated domain-like Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain 11
TGS-like ThrRS/AlaRS common domain 11
beta-Galactosidase/glucuronidase domain (Trans)glycosidases 11
GAF domain-like Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 11
Rho N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
Isochorismatase-like hydrolases Clavaminate synthase-like 11
Globin-like Homodimeric domain of signal transducing histidine kinase 11
Thioesterase/thiol ester dehydrase-isomerase Probable ACP-binding domain of malonyl-CoA ACP transacylase 11
GroES-like ACP-like 11
Transmembrane di-heme cytochromes Cytochrome c 11
FnI-like domain FnI-like domain 11
Eukaryotic type KH-domain (KH-domain type I) Nucleic acid-binding proteins 11
Formyltransferase ClpP/crotonase 11
PA domain Zn-dependent exopeptidases 11
FMN-dependent nitroreductase-like Thiolase-like 11
Globin-like Globin-like 11
Leukotriene A4 hydrolase N-terminal domain ARM repeat 11
Metallo-dependent phosphatases Multiheme cytochromes 11
Ligand-binding domain in the NO signalling and Golgi transport P-loop containing nucleoside triphosphate hydrolases 11
Chemotaxis receptor methyltransferase CheR, N-terminal domain CheY-like 11
Activating enzymes of the ubiquitin-like proteins FMN-dependent nitroreductase-like 11
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 11
Glutamyl tRNA-reductase catalytic, N-terminal domain NAD(P)-binding Rossmann-fold domains 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
Globin-like alpha/beta-Hydrolases 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 11
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 11
Glycosyl hydrolase domain Protein kinase-like (PK-like) 11
DNA polymerase beta, N-terminal domain-like Nucleotidyltransferase 11
P-loop containing nucleoside triphosphate hydrolases TrpR-like 11
Methylated DNA-protein cysteine methyltransferase domain DNA-glycosylase 11
Transmembrane di-heme cytochromes a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 11
HIT-like P-loop containing nucleoside triphosphate hydrolases 11
PKD domain Nitrous oxide reductase, N-terminal domain 11
ATP-dependent DNA ligase DNA-binding domain DNA ligase/mRNA capping enzyme, catalytic domain 11
Tropomyosin OmpA-like 11
Ribosomal protein S5 domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
FGAM synthase PurL, linker domain PurM N-terminal domain-like 11
CalX-like Arabinanase/levansucrase/invertase 11
GAF domain-like Phosphohistidine domain 11
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 11
WD40 repeat-like ARM repeat 11
Nucleic acid-binding proteins DNA helicase RuvA subunit, C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases Smc hinge domain 11
TPR-like cAMP-binding domain-like 11
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 11
L30e-like alpha/beta knot 11
TolB, C-terminal domain Toll/Interleukin receptor TIR domain 11
Tetrahydrobiopterin biosynthesis enzymes-like Tetrahydrobiopterin biosynthesis enzymes-like 11
Protein kinase-like (PK-like) YVTN repeat-like/Quinoprotein amine dehydrogenase 11
Acetyl-CoA synthetase-like FMN-dependent nitroreductase-like 11
"Winged helix" DNA-binding domain Homeodomain-like 11
CoA-dependent acyltransferases Probable ACP-binding domain of malonyl-CoA ACP transacylase 11
FKBP-like FKBP-like 11
Ribonuclease PH domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
CheY-like lambda repressor-like DNA-binding domains 11
GIY-YIG endonuclease C-terminal UvrC-binding domain of UvrB 11
DNase I-like LigT-like 11
EspE N-terminal domain-like GAF domain-like 11
Tex N-terminal region-like Ribonuclease H-like 11
CarD-like TRCF domain-like 11
TolA/TonB C-terminal domain Carboxypeptidase regulatory domain-like 11
Bacterial adhesins TSP type-3 repeat 11
RuvA domain 2-like DNA helicase RuvA subunit, C-terminal domain 11
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 11
P-loop containing nucleoside triphosphate hydrolases DNA ligase/mRNA capping enzyme, catalytic domain 11
FMN-binding split barrel S-adenosyl-L-methionine-dependent methyltransferases 11
"Winged helix" DNA-binding domain HRDC-like 11
Rhodanese/Cell cycle control phosphatase Activating enzymes of the ubiquitin-like proteins 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
Nucleic acid-binding proteins PheT/TilS domain 11
EspE N-terminal domain-like ARM repeat 11
Multiheme cytochromes Multiheme cytochromes 11
Ribosomal protein L6 Ribosomal protein L6 11
P-loop containing nucleoside triphosphate hydrolases ARM repeat 11
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 11
TPR-like Purine and uridine phosphorylases 11
PurS-like PurM N-terminal domain-like 11
Galactose-binding domain-like Six-hairpin glycosidases 11
DPP6 N-terminal domain-like WD40 repeat-like 11
Adenine nucleotide alpha hydrolases-like Homodimeric domain of signal transducing histidine kinase 11
Cytidine deaminase-like Dihydrofolate reductase-like 11
PheT/TilS domain Putative DNA-binding domain 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleic acid-binding proteins 11
Molybdenum cofactor-binding domain Molybdenum cofactor-binding domain 11
Adenine nucleotide alpha hydrolases-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
NAD(P)-binding Rossmann-fold domains SCP-like 11
RuvA domain 2-like RuvA domain 2-like 11
GroES-like GroES-like 11
6-phosphogluconate dehydrogenase C-terminal domain-like Chorismate mutase II 11
Thioesterase/thiol ester dehydrase-isomerase NAD(P)-binding Rossmann-fold domains 11
Nucleotide-binding domain Nucleotide-binding domain 11
Cupredoxins Starch-binding domain-like 11
Tricorn protease domain 2 WD40 repeat-like 11
Trigger factor ribosome-binding domain FKBP-like 11
Sialidases Blood coagulation inhibitor (disintegrin) 11
PUA domain-like S-adenosyl-L-methionine-dependent methyltransferases 11
4Fe-4S ferredoxins Metallo-hydrolase/oxidoreductase 11
Carbon-nitrogen hydrolase Pentapeptide repeat-like 11
EF-hand Nitric oxide (NO) synthase oxygenase domain 11
Acetyl-CoA synthetase-like SCP-like 11
TNF receptor-like NHL repeat 11
PA domain Metalloproteases ("zincins"), catalytic domain 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
FMN-dependent nitroreductase-like Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT) 11
EPT/RTPC-like RNA 3'-terminal phosphate cyclase, RPTC, insert domain 11
"Winged helix" DNA-binding domain Dimeric alpha+beta barrel 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
Carbohydrate-binding domain Barwin-like endoglucanases 11
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 11
Tricorn protease domain 2 YVTN repeat-like/Quinoprotein amine dehydrogenase 11
Carbohydrate phosphatase ADP-ribosylglycohydrolase 11
TATA-box binding protein-like DNA-glycosylase 11
HesB-like domain Rhodanese/Cell cycle control phosphatase 11
Acylphosphatase/BLUF domain-like YrdC/RibB 11
MFS general substrate transporter ARM repeat 11
Glycoside hydrolase/deacetylase Families 57/38 glycoside transferase middle domain 11
PurM N-terminal domain-like Class I glutamine amidotransferase-like 11
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 11
RNA-binding domain, RBD RNA-binding domain, RBD 11
Nucleic acid-binding proteins Rad51 N-terminal domain-like 11
S-adenosyl-L-methionine-dependent methyltransferases Nucleotide-diphospho-sugar transferases 11
Globin-like SpoIIaa-like 11
Transcription factor NusA, N-terminal domain Prokaryotic type KH domain (KH-domain type II) 11
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 11
CRISPR-associated protein CRISPR-associated protein 11
"Winged helix" DNA-binding domain Actin-like ATPase domain 11
Cobalamin (vitamin B12)-dependent enzymes Cobalamin (vitamin B12)-dependent enzymes 11
EF-hand Ferredoxin reductase-like, C-terminal NADP-linked domain 11
Radical SAM enzymes TPR-like 11
Blood coagulation inhibitor (disintegrin) Fucose-specific lectin 11
FMT C-terminal domain-like ClpP/crotonase 11
S13-like H2TH domain Glucocorticoid receptor-like (DNA-binding domain) 11
Multiheme cytochromes Soluble quinoprotein glucose dehydrogenase 11
NAD(P)-binding Rossmann-fold domains Riboflavin synthase domain-like 11
Lamin A/C globular tail domain Glutathione synthetase ATP-binding domain-like 11
DHS-like NAD/FAD-binding domain ARM repeat 11
HPr-like Phosphoenolpyruvate/pyruvate domain 11
PH0987 N-terminal domain-like Single hybrid motif 11
Nqo5-like HydB/Nqo4-like 11
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 11
Translation proteins Translation proteins 11
C2 domain (Calcium/lipid-binding domain, CaLB) PDZ domain-like 11
Fucose-specific lectin E set domains 11
NAD(P)-binding Rossmann-fold domains Nitric oxide (NO) synthase oxygenase domain 11
Aspartate/glutamate racemase Aspartate/glutamate racemase 11
Glutathione synthetase ATP-binding domain-like DmpA/ArgJ-like 11
Calcium-dependent phosphotriesterase Cytochrome c 11
ARM repeat MurD-like peptide ligases, catalytic domain 11
P-loop containing nucleoside triphosphate hydrolases Phosphoglycerate mutase-like 11
Alpha-L RNA-binding motif S-adenosyl-L-methionine-dependent methyltransferases 11
Urease, gamma-subunit Urease, beta-subunit 11
(Trans)glycosidases PGBD-like 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 11
R1 subunit of ribonucleotide reductase, N-terminal domain PFL-like glycyl radical enzymes 11
Ribulose-phoshate binding barrel Ribulose-phoshate binding barrel 11
Nqo1 middle domain-like Nqo1C-terminal domain-like 11
Rho N-terminal domain-like Nucleic acid-binding proteins 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
RuvA domain 2-like P-loop containing nucleoside triphosphate hydrolases 11
Fucose-specific lectin alpha/beta-Hydrolases 11
Transcription factor NusA, N-terminal domain Rad51 N-terminal domain-like 11
Homeodomain-like Probable bacterial effector-binding domain 11
Prokaryotic type KH domain (KH-domain type II) Prokaryotic type KH domain (KH-domain type II) 11
Prokaryotic type I DNA topoisomerase Zinc beta-ribbon 11
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 11
Chromo domain-like Chromo domain-like 11
Nucleotidyltransferase Nucleotidyltransferase 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
FGAM synthase PurL, linker domain PurM C-terminal domain-like 11
Class II aaRS and biotin synthetases C-terminal domain of ProRS 11
Thioredoxin-like HesB-like domain 11
Composite domain of metallo-dependent hydrolases TSP type-3 repeat 11
Carboxypeptidase regulatory domain-like Cna protein B-type domain 11
SMI1/KNR4-like ARM repeat 11
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 11
Putative DNA-binding domain TPR-like 11
3-carboxy-cis,cis-mucoante lactonizing enzyme Cytochrome c 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
P-loop containing nucleoside triphosphate hydrolases SMR domain-like 11
Putative DNA-binding domain CheY-like 11
Class II aaRS and biotin synthetases Translation proteins 11
PurS-like PurM C-terminal domain-like 11
Cobalamin (vitamin B12)-dependent enzymes Cobalamin (vitamin B12)-binding domain 11
Methylesterase CheB, C-terminal domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
"Winged helix" DNA-binding domain Tetracyclin repressor-like, C-terminal domain 11
TNF receptor-like TNF receptor-like 11
PreATP-grasp domain DmpA/ArgJ-like 11
5' to 3' exonuclease, C-terminal subdomain Ribonuclease H-like 11
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Pyrimidine nucleoside phosphorylase C-terminal domain 11
Rad51 N-terminal domain-like Rad51 N-terminal domain-like 11
LigT-like PAP/OAS1 substrate-binding domain 11
Chaperone J-domain HSC20 (HSCB), C-terminal oligomerisation domain 11
(Trans)glycosidases Cysteine proteinases 11
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 11
HIT-like Phospholipase D/nuclease 11
HPr-like Phosphohistidine domain 11
Methylglyoxal synthase-like Cytidine deaminase-like 11
TGS-like Class II aaRS and biotin synthetases 11
CbiG N-terminal domain-like CobE/GbiG C-terminal domain-like 11
"Winged helix" DNA-binding domain MukF C-terminal domain-like 11
UDP-Glycosyltransferase/glycogen phosphorylase UDP-Glycosyltransferase/glycogen phosphorylase 11
Aminopeptidase/glucanase lid domain Zn-dependent exopeptidases 11
YVTN repeat-like/Quinoprotein amine dehydrogenase Pentapeptide repeat-like 11
P-loop containing nucleoside triphosphate hydrolases Restriction endonuclease-like 11
P-loop containing nucleoside triphosphate hydrolases CarD-like 11
Homo-oligomeric flavin-containing Cys decarboxylases, HFCD CoaB-like 11
TPR-like HCP-like 11
2Fe-2S ferredoxin-like FAD/NAD(P)-binding domain 11
P-loop containing nucleoside triphosphate hydrolases TolB, C-terminal domain 11
Cyclophilin-like Cyclophilin-like 11
4'-phosphopantetheinyl transferase 4'-phosphopantetheinyl transferase 11
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Carbohydrate-binding domain PHL pollen allergen 11
YWTD domain Cytochrome c 11
Putative DNA-binding domain Antibiotic binding domain of TipA-like multidrug resistance regulators 11
CoA-dependent acyltransferases Clavaminate synthase-like 11
N-terminal domain of DnaB helicase P-loop containing nucleoside triphosphate hydrolases 11
Multiheme cytochromes FAD/NAD(P)-binding domain 11
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 11
Hypothetical protein YjbJ Hypothetical protein YjbJ 11
DNA ligase/mRNA capping enzyme, catalytic domain RuvA domain 2-like 11
Tex N-terminal region-like Nucleic acid-binding proteins 11
ARM repeat Cyclophilin-like 11
(Trans)glycosidases Protein kinase-like (PK-like) 11
2Fe-2S ferredoxin-like 4Fe-4S ferredoxins 11
Rhodanese/Cell cycle control phosphatase Rhodanese/Cell cycle control phosphatase 11
DNA polymerase beta, N-terminal domain-like Sec63 N-terminal domain-like 11
NAD-binding domain of HMG-CoA reductase Substrate-binding domain of HMG-CoA reductase 11
Nucleotide cyclase EAL domain-like 11
Carbohydrate binding domain Carbohydrate binding domain 11
Protein kinase-like (PK-like) Periplasmic binding protein-like I 11
Ferritin-like HAD-like 11
Homocysteine S-methyltransferase FAD-linked oxidoreductase 11
Putative DNA-binding domain Cobalamin (vitamin B12)-binding domain 11
Galactose-binding domain-like UraD-Like 11
Terpenoid cyclases/Protein prenyltransferases Alpha-macroglobulin receptor domain 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
AbfB domain Arabinanase/levansucrase/invertase 11
FMN-dependent nitroreductase-like NAD(P)-binding Rossmann-fold domains 11
Subtilisin-like Integrin alpha N-terminal domain 11
TolB, C-terminal domain WD40 repeat-like 11
Sec63 N-terminal domain-like Nucleotidyltransferase 11
Integrin alpha N-terminal domain Hedgehog/intein (Hint) domain 11
PreATP-grasp domain PH0987 N-terminal domain-like 11
beta-lactamase/transpeptidase-like Penicillin-binding protein 2x (pbp-2x), c-terminal domain 11
Acetyl-CoA synthetase-like Bacterial luciferase-like 11
Carbon-nitrogen hydrolase Adenine nucleotide alpha hydrolases-like 11
Nucleotidyltransferase PHP domain-like 11
C-terminal UvrC-binding domain of UvrB RuvA domain 2-like 11
RuvA domain 2-like BRCT domain 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase SpoIIaa-like 11
CBS-domain pair CBS-domain pair 11
NAD(P)-linked oxidoreductase P-loop containing nucleoside triphosphate hydrolases 11
P-loop containing nucleoside triphosphate hydrolases Tricorn protease domain 2 11
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 11
Metalloproteases ("zincins"), catalytic domain Ricin B-like lectins 11
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 11
HprK N-terminal domain-like PEP carboxykinase-like 11
Trypsin-like serine proteases Type III secretory system chaperone-like 11
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 11
Isochorismatase-like hydrolases ACP-like 11
Class II aaRS and biotin synthetases C-terminal domain of transcriptional repressors 11
Tropomyosin vWA-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase HSP90 C-terminal domain 11
FGAM synthase PurL, linker domain Class I glutamine amidotransferase-like 11
Thioredoxin-like TPR-like 11
P-loop containing nucleoside triphosphate hydrolases Chaperone J-domain 11
YhbC-like, N-terminal domain YhbC-like, C-terminal domain 11
Calcium-dependent phosphotriesterase 3-carboxy-cis,cis-mucoante lactonizing enzyme 11
HAMP domain-like PP2C-like 11
CoA-dependent acyltransferases Bacterial luciferase-like 11
FMN-dependent nitroreductase-like FMN-dependent nitroreductase-like 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
FAD-binding/transporter-associated domain-like CO dehydrogenase flavoprotein C-terminal domain-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FMN-linked oxidoreductases 11
Thioesterase/thiol ester dehydrase-isomerase FabD/lysophospholipase-like 11
ACT-like HAD-like 11
Chemotaxis receptor methyltransferase CheR, N-terminal domain Homodimeric domain of signal transducing histidine kinase 11
PPK N-terminal domain-like Phospholipase D/nuclease 11
TSP type-3 repeat vWA-like 11
Molybdenum cofactor biosynthesis proteins CinA-like 11
YWTD domain YWTD domain 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
HAMP domain-like PYP-like sensor domain (PAS domain) 11
TolB, N-terminal domain TPR-like 11
PPK N-terminal domain-like PHP14-like 11
Chelatase Thioredoxin-like 11
Caspase-like SMAD/FHA domain 11
N-terminal domain of MutM-like DNA repair proteins Glucocorticoid receptor-like (DNA-binding domain) 11
EF-hand Riboflavin synthase domain-like 11
Ferritin-like Calcium ATPase, transmembrane domain M 11
RNase III domain-like dsRNA-binding domain-like 11
2Fe-2S ferredoxin-like Riboflavin synthase domain-like 11
Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 11
DNA repair protein MutS, domain III SMR domain-like 11
Riboflavin synthase domain-like Nitric oxide (NO) synthase oxygenase domain 11
Protein kinase-like (PK-like) TolB, N-terminal domain 11
PIN domain-like DNA/RNA polymerases 11
HAMP domain-like Histidine-containing phosphotransfer domain, HPT domain 11
Calcium-dependent phosphotriesterase NHL repeat 11
NAD(P)-binding Rossmann-fold domains Glycerol-3-phosphate (1)-acyltransferase 11
P-loop containing nucleoside triphosphate hydrolases C-terminal UvrC-binding domain of UvrB 11
FMN-binding split barrel Acyl-CoA N-acyltransferases (Nat) 11
SMAD/FHA domain PP2C-like 11
PTS system fructose IIA component-like Phosphohistidine domain 11
PheT/TilS domain Anticodon-binding domain of PheRS 11
TNF receptor-like Arabinanase/levansucrase/invertase 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
Galactose-binding domain-like E set domains 11
DNase I-like PAP/OAS1 substrate-binding domain 11
Tetrapyrrole methylase HemD-like 11
PKD domain Cytochrome c 11
MalF N-terminal region-like MetI-like 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Nucleic acid-binding proteins 11
FAD/NAD(P)-binding domain ISP domain 11
PreATP-grasp domain Methylglyoxal synthase-like 11
Actin-like ATPase domain HD-domain/PDEase-like 11
"Winged helix" DNA-binding domain LexA/Signal peptidase 11
3-carboxy-cis,cis-mucoante lactonizing enzyme YWTD domain 11
NAD(P)-binding Rossmann-fold domains Glutamyl tRNA-reductase dimerization domain 11
Ferritin-like Calcium ATPase, transduction domain A 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 11
DHS-like NAD/FAD-binding domain P-loop containing nucleoside triphosphate hydrolases 11
PRTase-like alpha/beta-Hydrolases 11
Nucleic acid-binding proteins GAD domain-like 11
Glucocorticoid receptor-like (DNA-binding domain) P-loop containing nucleoside triphosphate hydrolases 11
Protein kinase-like (PK-like) PDZ domain-like 11
EF-hand Cytochrome c 11
Arabinanase/levansucrase/invertase Arabinanase/levansucrase/invertase 11
Caspase-like Toll/Interleukin receptor TIR domain 11
Ribonuclease H-like HRDC-like 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11
(Phosphotyrosine protein) phosphatases II (Phosphotyrosine protein) phosphatases II 11
Dimeric alpha+beta barrel Dimeric alpha+beta barrel 11
Nitrite/Sulfite reductase N-terminal domain-like Nitrite/Sulfite reductase N-terminal domain-like 11
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 11
PIN domain-like P-loop containing nucleoside triphosphate hydrolases 11
Translation proteins PRC-barrel domain 11
Composite domain of metallo-dependent hydrolases Lamin A/C globular tail domain 11
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 11
NHL repeat Cytochrome c 11
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 11
Probable ACP-binding domain of malonyl-CoA ACP transacylase Inosine monophosphate dehydrogenase (IMPDH) 11
Glycerol-3-phosphate (1)-acyltransferase SCP-like 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
Galactose mutarotase-like Glycosyl hydrolase domain 11
Nucleotide cyclase Homeodomain-like 11
Cyclophilin-like Single hybrid motif 11
PUA domain-like alpha/beta knot 11
CheY-like TPR-like 11
Glutamyl tRNA-reductase catalytic, N-terminal domain Glutamyl tRNA-reductase dimerization domain 11
TGS-like ACT-like 11
vWA-like SMAD/FHA domain 11
SMAD/FHA domain Homodimeric domain of signal transducing histidine kinase 11
Class II aaRS ABD-related C-terminal domain of ProRS 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Alpha subunit of glutamate synthase, C-terminal domain 11
Protein kinase-like (PK-like) Macro domain-like 11
lambda repressor-like DNA-binding domains Periplasmic binding protein-like II 11
Nucleic acid-binding proteins Putative DNA-binding domain 11
Carboxypeptidase regulatory domain-like Multiheme cytochromes 11
Nucleic acid-binding proteins S-adenosyl-L-methionine-dependent methyltransferases 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Eukaryotic type KH-domain (KH-domain type I) 11
DNA polymerase beta, N-terminal domain-like PHP domain-like 11
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 11
all-alpha NTP pyrophosphatases all-alpha NTP pyrophosphatases 11
Protein kinase-like (PK-like) C-terminal domain of RNA polymerase alpha subunit 11
Zn-dependent exopeptidases PDZ domain-like 11
TPR-like UDP-Glycosyltransferase/glycogen phosphorylase 11
Galactose-binding domain-like beta-Galactosidase/glucuronidase domain 11
CheW-like CheW-like 11
Trypsin-like serine proteases gamma-Crystallin-like 11
Class II aaRS and biotin synthetases GAD domain-like 11
Alkaline phosphatase-like ARM repeat 11
FMN-linked oxidoreductases 4Fe-4S ferredoxins 11
Carbamate kinase-like Acyl-CoA N-acyltransferases (Nat) 11
Metallo-dependent phosphatases DNA ligase/mRNA capping enzyme, catalytic domain 11
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 11
Glutathione synthetase ATP-binding domain-like Cyclophilin-like 11
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 11
PK beta-barrel domain-like PK C-terminal domain-like 11
Starch-binding domain-like OmpA-like 11
Fibronectin type III Lipase/lipooxygenase domain (PLAT/LH2 domain) 11
TPR-like ARM repeat 11
Galactose-binding domain-like TSP type-3 repeat 11
Hsp33 domain HSP33 redox switch-like 11
Cryptochrome/photolyase, N-terminal domain Cryptochrome/photolyase FAD-binding domain 11
DNase I-like Nucleotidyltransferase 11
Putative DNA-binding domain Methionine synthase domain 11
Nudix "Winged helix" DNA-binding domain 11
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 11
2Fe-2S ferredoxin-like Formate dehydrogenase/DMSO reductase, domains 1-3 11
Prokaryotic type I DNA topoisomerase P-loop containing nucleoside triphosphate hydrolases 11
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 11
Adenine nucleotide alpha hydrolases-like GAF domain-like 11
MFS general substrate transporter S-adenosyl-L-methionine-dependent methyltransferases 11
Mss4-like Peptide methionine sulfoxide reductase 11
Nucleic acid-binding proteins Prokaryotic type KH domain (KH-domain type II) 11
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 11
Adenine nucleotide alpha hydrolases-like DHS-like NAD/FAD-binding domain 11
Trypsin-like serine proteases Toll/Interleukin receptor TIR domain 11
ACP-like Bacterial luciferase-like 11
DNA clamp DNA clamp 11
Galactose-binding domain-like Galactose-binding domain-like 11
Carboxypeptidase regulatory domain-like NHL repeat 11
Glutathione synthetase ATP-binding domain-like PH0987 N-terminal domain-like 11
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 11
Trypsin-like serine proteases Carbohydrate-binding domain 11
Blood coagulation inhibitor (disintegrin) Blood coagulation inhibitor (disintegrin) 11
TerB-like Metallo-dependent phosphatases 11
Protein kinase-like (PK-like) Multiheme cytochromes 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
Nucleotide-diphospho-sugar transferases NAD(P)-binding Rossmann-fold domains 11
Putative DNA-binding domain Anticodon-binding domain of PheRS 11
Galactose mutarotase-like Starch-binding domain-like 11
Thymidylate synthase-complementing protein Thy1 Thymidylate synthase-complementing protein Thy1 11
Purple acid phosphatase, N-terminal domain Metallo-dependent phosphatases 11
Nucleotidylyl transferase Riboflavin kinase-like 11
Trypsin-like serine proteases Integrin alpha N-terminal domain 11
4Fe-4S ferredoxins HydA/Nqo6-like 11
Homeodomain-like DNA-glycosylase 11
Rudiment single hybrid motif Cyclophilin-like 11
MFS general substrate transporter MFS general substrate transporter 11
Metalloproteases ("zincins"), catalytic domain ARM repeat 11
PGBD-like Calcium-dependent phosphotriesterase 11
EPT/RTPC-like EPT/RTPC-like 11
Thioredoxin-like Six-hairpin glycosidases 11
Bacillus cereus metalloprotein-like Bacillus cereus metalloprotein-like 11
Cytochrome c Soluble quinoprotein glucose dehydrogenase 11
(Trans)glycosidases (Trans)glycosidases 11
Six-hairpin glycosidases Starch-binding domain-like 11
PheT/TilS domain Class II aaRS and biotin synthetases 11
Terpenoid synthases Terpenoid synthases 11
Acetyl-CoA synthetase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 11
Penicillin binding protein dimerisation domain Penicillin-binding protein 2x (pbp-2x), c-terminal domain 11
5' to 3' exonuclease, C-terminal subdomain DNA/RNA polymerases 11
UDP-Glycosyltransferase/glycogen phosphorylase Nucleotide-diphospho-sugar transferases 11
P-loop containing nucleoside triphosphate hydrolases Microbial and mitochondrial ADK, insert "zinc finger" domain 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11

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