SUPERFAMILY 1.75 HMM library and genome assignments server

Domain combination pairs in Genome sequence of Rhizobium sp. strain IRBG74

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

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Adjacent domain pairs graph

Graph of adjacent domain pairs.


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Domain combination pairs

677 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
"Winged helix" DNA-binding domain Periplasmic binding protein-like II 681
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 5111
P-loop containing nucleoside triphosphate hydrolases MOP-like 451
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 3317
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 325
"Winged helix" DNA-binding domain GntR ligand-binding domain-like 291
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 252
Homeodomain-like Tetracyclin repressor-like, C-terminal domain 232
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 224
Homeodomain-like Homeodomain-like 224
GroES-like NAD(P)-binding Rossmann-fold domains 222
lambda repressor-like DNA-binding domains Periplasmic binding protein-like I 221
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 214
Metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 166
"Winged helix" DNA-binding domain Dimeric alpha+beta barrel 161
CheY-like C-terminal effector domain of the bipartite response regulators 162
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 162
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 1613
Actin-like ATPase domain Actin-like ATPase domain 158
Thioredoxin-like GST C-terminal domain-like 151
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 153
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 1310
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 133
HAMP domain-like Methyl-accepting chemotaxis protein (MCP) signaling domain 135
EAL domain-like Nucleotide cyclase 127
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 125
PYP-like sensor domain (PAS domain) PYP-like sensor domain (PAS domain) 129
Enolase N-terminal domain-like Enolase C-terminal domain-like 122
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 112
Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase C-terminal domain-like 113
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 103
"Winged helix" DNA-binding domain GAF domain-like 103
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 94
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheY-like 97
Thiolase-like Thiolase-like 91
MetI-like MetI-like 92
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 82
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB transmembrane domain 83
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 83
Formate dehydrogenase/DMSO reductase, domains 1-3 ADC-like 83
PreATP-grasp domain Rudiment single hybrid motif 83
(Trans)glycosidases Glycosyl hydrolase domain 85
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB transmembrane domain 83
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 83
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 83
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 83
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 83
RmlC-like cupins Homeodomain-like 72
P-loop containing nucleoside triphosphate hydrolases Translation proteins 76
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 73
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 73
PYP-like sensor domain (PAS domain) CheY-like 76
"Winged helix" DNA-binding domain Actin-like ATPase domain 73
cAMP-binding domain-like "Winged helix" DNA-binding domain 62
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 61
Homeodomain-like SIS domain 61
Class I glutamine amidotransferase-like Homeodomain-like 62
Homodimeric domain of signal transducing histidine kinase CheY-like 65
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 63
PLP-binding barrel Alanine racemase C-terminal domain-like 62
Regulatory protein AraC Homeodomain-like 62
"Winged helix" DNA-binding domain Chorismate lyase-like 61
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 63
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 65
CheY-like P-loop containing nucleoside triphosphate hydrolases 62
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 51
P-loop containing nucleoside triphosphate hydrolases Hypothetical protein YjiA, C-terminal domain 51
PYP-like sensor domain (PAS domain) Nucleotide cyclase 54
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 51
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 53
CheY-like Homeodomain-like 51
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 54
"Winged helix" DNA-binding domain NagB/RpiA/CoA transferase-like 51
HAD-like Calcium ATPase, transmembrane domain M 54
Calcium ATPase, transduction domain A HAD-like 54
E set domains (Trans)glycosidases 53
CheY-like CheY-like 53
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 54
PYP-like sensor domain (PAS domain) EAL domain-like 43
Nucleic acid-binding proteins Nucleic acid-binding proteins 44
Lysozyme-like beta-lactamase/transpeptidase-like 42
PreATP-grasp domain Single hybrid motif 42
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 43
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 43
HMA, heavy metal-associated domain HAD-like 43
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 41
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein S5 domain 2-like 44
Rudiment single hybrid motif Single hybrid motif 42
GAF domain-like GAF domain-like 44
ACT-like ACT-like 43
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 44
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 43
Cytochrome c Cytochrome c 42
PGBD-like L,D-transpeptidase catalytic domain-like 43
"Winged helix" DNA-binding domain PLP-dependent transferases 41
Glutathione synthetase ATP-binding domain-like Single hybrid motif 42
Lysozyme-like PGBD-like 42
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 43
Methylated DNA-protein cysteine methyltransferase domain Methylated DNA-protein cysteine methyltransferase, C-terminal domain 44
GAF domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 44
Folate-binding domain Aminomethyltransferase beta-barrel domain 43
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 32
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 31
Aconitase iron-sulfur domain LeuD/IlvD-like 33
HAMP domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 32
E set domains Glycosyl hydrolase domain 32
Alpha-L RNA-binding motif Pseudouridine synthase 32
Class II aaRS and biotin synthetases Class II aaRS ABD-related 33
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 32
Aldolase post-HMGL domain-like 32
Single hybrid motif CoA-dependent acyltransferases 32
HAMP domain-like Homodimeric domain of signal transducing histidine kinase 32
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 32
Sensory domain-like HAMP domain-like 33
2Fe-2S ferredoxin-like CO dehydrogenase ISP C-domain like 32
PYP-like sensor domain (PAS domain) Methyl-accepting chemotaxis protein (MCP) signaling domain 31
ACT-like Formyltransferase 32
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 31
Metallo-dependent phosphatases 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain 33
Phospholipase D/nuclease Phospholipase D/nuclease 33
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 33
Nucleic acid-binding proteins RuvA domain 2-like 33
Translation proteins EF-G C-terminal domain-like 33
FAD/NAD(P)-binding domain Aminomethyltransferase beta-barrel domain 32
beta-Galactosidase/glucuronidase domain (Trans)glycosidases 32
MalF N-terminal region-like MetI-like 31
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 31
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 32
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex CoA-dependent acyltransferases 32
FAD-binding/transporter-associated domain-like CO dehydrogenase flavoprotein C-terminal domain-like 32
HMA, heavy metal-associated domain HMA, heavy metal-associated domain 32
Thioesterase/thiol ester dehydrase-isomerase Thioesterase/thiol ester dehydrase-isomerase 32
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 32
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 33
Galactose-binding domain-like (Trans)glycosidases 32
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 33
lambda repressor-like DNA-binding domains RmlC-like cupins 31
PYP-like sensor domain (PAS domain) GAF domain-like 33
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 32
CoA-dependent acyltransferases CoA-dependent acyltransferases 33
Aspartate/glutamate racemase Aspartate/glutamate racemase 31
EF-G C-terminal domain-like EF-G C-terminal domain-like 33
HAMP domain-like Nucleotide cyclase 33
HlyD-like secretion proteins HlyD-like secretion proteins 32
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 32
TrkA C-terminal domain-like TrkA C-terminal domain-like 32
Sensory domain-like Methyl-accepting chemotaxis protein (MCP) signaling domain 33
Pheromone-binding domain of LuxR-like quorum-sensing transcription factors C-terminal effector domain of the bipartite response regulators 31
Triger factor/SurA peptide-binding domain-like FKBP-like 33
PDZ domain-like PDZ domain-like 33
Single hybrid motif Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 32
FAD/NAD(P)-binding domain Folate-binding domain 32
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 33
Nucleotidyltransferase Nucleotidyltransferase substrate binding subunit/domain 33
CO dehydrogenase molybdoprotein N-domain-like Molybdenum cofactor-binding domain 31
Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 32
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 33
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 31
L30e-like alpha/beta knot 31
Galactose-binding domain-like beta-Galactosidase/glucuronidase domain 32
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 32
GroES-like GroES-like 31
Trypsin-like serine proteases PDZ domain-like 33
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 33
HAMP domain-like PYP-like sensor domain (PAS domain) 22
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 22
Cytochrome c oxidase subunit II-like, transmembrane region Cupredoxins 22
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 22
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 22
AGR C 984p-like AGR C 984p-like 21
AraD/HMP-PK domain-like NAD(P)-binding Rossmann-fold domains 21
GAF domain-like P-loop containing nucleoside triphosphate hydrolases 22
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 21
Sm-like ribonucleoproteins Mechanosensitive channel protein MscS (YggB), C-terminal domain 22
NAD(P)-binding Rossmann-fold domains Tetrapyrrole methylase 21
MgtE N-terminal domain-like MgtE membrane domain-like 21
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FMN-linked oxidoreductases 22
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 21
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 22
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 22
TPR-like S-adenosyl-L-methionine-dependent methyltransferases 21
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 22
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 21
ABC transporter involved in vitamin B12 uptake, BtuC ABC transporter involved in vitamin B12 uptake, BtuC 21
Pectin lyase-like Autotransporter 22
P-loop containing nucleoside triphosphate hydrolases Glucocorticoid receptor-like (DNA-binding domain) 22
NAD(P)-binding Rossmann-fold domains Isocitrate/Isopropylmalate dehydrogenase-like 21
Ada DNA repair protein, N-terminal domain (N-Ada 10) Methylated DNA-protein cysteine methyltransferase, C-terminal domain 22
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
Diaminopimelate epimerase-like Diaminopimelate epimerase-like 21
PH0987 N-terminal domain-like Cyclophilin-like 22
6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 21
ParB/Sulfiredoxin KorB DNA-binding domain-like 21
CBS-domain pair MgtE membrane domain-like 21
Nucleotidyltransferase ACT-like 22
FAD/NAD(P)-binding domain HI0933 insert domain-like 21
tRNA-binding arm Class II aaRS and biotin synthetases 21
GroEL equatorial domain-like GroEL apical domain-like 21
P-loop containing nucleoside triphosphate hydrolases CBS-domain pair 21
(Trans)glycosidases Class I glutamine amidotransferase-like 21
MurCD N-terminal domain MurD-like peptide ligases, catalytic domain 21
Class II aaRS and biotin synthetases ThrRS/AlaRS common domain 22
Homeodomain-like Methylated DNA-protein cysteine methyltransferase domain 22
Homeodomain-like Methylated DNA-protein cysteine methyltransferase, C-terminal domain 22
Zinc beta-ribbon DNA primase core 22
EF-G C-terminal domain-like Ribosomal protein S5 domain 2-like 22
Translation proteins ThrRS/AlaRS common domain 22
beta-lactamase/transpeptidase-like Sporulation related repeat 22
MgtE N-terminal domain-like CBS-domain pair 21
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 22
MetI-like P-loop containing nucleoside triphosphate hydrolases 22
Nucleic acid-binding proteins Translation proteins SH3-like domain 22
DNA clamp DNA clamp 21
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 22
beta-Galactosidase/glucuronidase domain beta-Galactosidase/glucuronidase domain 21
ClpP/crotonase ClpP/crotonase 21
Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), C-terminal domain 22
Nitrite and sulphite reductase 4Fe-4S domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 22
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 21
Sensory domain-like Homodimeric domain of signal transducing histidine kinase 22
NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains 22
Ferredoxin reductase-like, C-terminal NADP-linked domain 2Fe-2S ferredoxin-like 21
GAF domain-like Homodimeric domain of signal transducing histidine kinase 22
Ada DNA repair protein, N-terminal domain (N-Ada 10) Methylated DNA-protein cysteine methyltransferase domain 22
Cupredoxins Cupredoxins 22
Penicillin binding protein dimerisation domain beta-lactamase/transpeptidase-like 21
alpha/beta-Hydrolases alpha/beta-Hydrolases 21
Riboflavin synthase domain-like 2Fe-2S ferredoxin-like 21
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 22
Calcium ATPase, transduction domain A Metal cation-transporting ATPase, ATP-binding domain N 22
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 22
GroEL equatorial domain-like GroEL-intermediate domain like 21
Aminoacid dehydrogenase-like, N-terminal domain Isocitrate/Isopropylmalate dehydrogenase-like 21
Siroheme synthase middle domains-like Tetrapyrrole methylase 21
post-HMGL domain-like 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 21
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Alpha subunit of glutamate synthase, C-terminal domain 22
2Fe-2S ferredoxin-like Formate dehydrogenase/DMSO reductase, domains 1-3 22
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 22
NAD(P)-binding Rossmann-fold domains UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 21
MurCD N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
Metal cation-transporting ATPase, ATP-binding domain N HAD-like 22
NagB/RpiA/CoA transferase-like NagB/RpiA/CoA transferase-like 21
Sigma3 and sigma4 domains of RNA polymerase sigma factors NagB/RpiA/CoA transferase-like 21
GroEL-intermediate domain like GroEL apical domain-like 21
Nucleotidyltransferase Poly A polymerase C-terminal region-like 22
NAD(P)-binding Rossmann-fold domains ACT-like 22
Nqo1 FMN-binding domain-like Nqo1 middle domain-like 22
CheY-like Nucleotide cyclase 21
Macro domain-like Zn-dependent exopeptidases 21
4Fe-4S ferredoxins Formate dehydrogenase/DMSO reductase, domains 1-3 22
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 22
GAF domain-like Nucleotide cyclase 22
Adenine nucleotide alpha hydrolases-like DHS-like NAD/FAD-binding domain 21
Sensory domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 22
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 22
Nqo1 FMN-binding domain-like Nqo1C-terminal domain-like 22
Metal cation-transporting ATPase, ATP-binding domain N Calcium ATPase, transmembrane domain M 22
DnaK suppressor protein DksA, alpha-hairpin domain Glucocorticoid receptor-like (DNA-binding domain) 21
PurM N-terminal domain-like PurM C-terminal domain-like 22
GAF domain-like Homeodomain-like 22
Globin-like Methyl-accepting chemotaxis protein (MCP) signaling domain 21
Nqo1 middle domain-like Nqo1C-terminal domain-like 22
Rhodanese/Cell cycle control phosphatase Rhodanese/Cell cycle control phosphatase 22
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 21
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 21
NAD(P)-binding Rossmann-fold domains Siroheme synthase middle domains-like 21
HAMP domain-like EAL domain-like 22
FMN-linked oxidoreductases Alpha subunit of glutamate synthase, C-terminal domain 22
Chaperone J-domain HSP40/DnaJ peptide-binding domain 22
TPR-like TPR-like 22
2Fe-2S ferredoxin-like 4Fe-4S ferredoxins 22
CBS-domain pair FAD-binding/transporter-associated domain-like 21
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 11
FAD/NAD(P)-binding domain Nitrite and sulphite reductase 4Fe-4S domain-like 11
Histidine-containing phosphotransfer domain, HPT domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Homo-oligomeric flavin-containing Cys decarboxylases, HFCD CoaB-like 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
Nucleotidylyl transferase Riboflavin kinase-like 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 11
Nucleic acid-binding proteins Rad51 N-terminal domain-like 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
HCP-like PGBD-like 11
TrmE connector domain P-loop containing nucleoside triphosphate hydrolases 11
FAD-linked reductases, C-terminal domain 4Fe-4S ferredoxins 11
TGS-like Class II aaRS ABD-related 11
CoA-dependent acyltransferases ACP-like 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
CheY-like Methylesterase CheB, C-terminal domain 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
R1 subunit of ribonucleotide reductase, N-terminal domain PFL-like glycyl radical enzymes 11
Bacterial muramidases Lysozyme-like 11
Caspase-like Sec63 N-terminal domain-like 11
beta-lactamase/transpeptidase-like Penicillin-binding protein associated domain 11
TGS-like ThrRS/AlaRS common domain 11
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 11
Tetrapyrrole methylase S-adenosyl-L-methionine-dependent methyltransferases 11
RuvA domain 2-like DNA helicase RuvA subunit, C-terminal domain 11
TGS-like ACT-like 11
5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain LysM domain 11
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 11
PPK N-terminal domain-like PHP14-like 11
Galactose mutarotase-like Glycosyl hydrolase domain 11
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 11
Nitrite/Sulfite reductase N-terminal domain-like Nitrite/Sulfite reductase N-terminal domain-like 11
Putative DNA-binding domain P-loop containing nucleoside triphosphate hydrolases 11
Nucleotide-diphospho-sugar transferases Galactose mutarotase-like 11
CO dehydrogenase ISP C-domain like FAD-binding/transporter-associated domain-like 11
GAF domain-like Calcium-dependent phosphotriesterase 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
PDZ domain-like ClpP/crotonase 11
Serine metabolism enzymes domain ACT-like 11
Glutathione synthetase ATP-binding domain-like post-HMGL domain-like 11
"Winged helix" DNA-binding domain HRDC-like 11
Nucleotidyltransferase substrate binding subunit/domain ACT-like 11
LysM domain Duplicated hybrid motif 11
Fe-S cluster assembly (FSCA) domain-like P-loop containing nucleoside triphosphate hydrolases 11
Transmembrane di-heme cytochromes a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 11
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 11
Prokaryotic type KH domain (KH-domain type II) Prokaryotic type KH domain (KH-domain type II) 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 11
DeoB insert domain-like Alkaline phosphatase-like 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Nucleic acid-binding proteins 11
Putative DNA-binding domain Anticodon-binding domain of PheRS 11
TGS-like Class II aaRS and biotin synthetases 11
Carbamate kinase-like PUA domain-like 11
HAMP domain-like GAF domain-like 11
Cryptochrome/photolyase, N-terminal domain Cryptochrome/photolyase FAD-binding domain 11
Hypothetical protein SAV1430 Fe-S cluster assembly (FSCA) domain-like 11
Histidine-containing phosphotransfer domain, HPT domain CheW-like 11
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 11
GIY-YIG endonuclease C-terminal UvrC-binding domain of UvrB 11
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 11
PreATP-grasp domain post-HMGL domain-like 11
Single hybrid motif TK C-terminal domain-like 11
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 11
Fibronectin type III Autotransporter 11
Glutathione synthetase ATP-binding domain-like Glycoside hydrolase/deacetylase 11
Peptidase/esterase 'gauge' domain alpha/beta-Hydrolases 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
Tex N-terminal region-like Ribonuclease H-like 11
Prokaryotic type I DNA topoisomerase Zinc beta-ribbon 11
N-acetylmuramoyl-L-alanine amidase-like PGBD-like 11
YVTN repeat-like/Quinoprotein amine dehydrogenase Thermostable phytase (3-phytase) 11
HMA, heavy metal-associated domain Metal cation-transporting ATPase, ATP-binding domain N 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
2Fe-2S ferredoxin-like CO dehydrogenase flavoprotein C-terminal domain-like 11
Homocysteine S-methyltransferase Cobalamin (vitamin B12)-binding domain 11
MoeA N-terminal region -like Molybdenum cofactor biosynthesis proteins 11
Nucleic acid-binding proteins Putative DNA-binding domain 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
FAD-linked oxidases, C-terminal domain alpha-helical ferredoxin 11
P-loop containing nucleoside triphosphate hydrolases Restriction endonuclease-like 11
5' to 3' exonuclease, C-terminal subdomain DNA/RNA polymerases 11
Transcription factor NusA, N-terminal domain Rad51 N-terminal domain-like 11
YebC-like PFL-like glycyl radical enzymes 11
Nucleotide-diphospho-sugar transferases Six-hairpin glycosidases 11
FliG FliG 11
Nucleotidyltransferase substrate binding subunit/domain Poly A polymerase C-terminal region-like 11
PYP-like sensor domain (PAS domain) C-terminal effector domain of the bipartite response regulators 11
DNA ligase/mRNA capping enzyme, catalytic domain RuvA domain 2-like 11
Nucleic acid-binding proteins ArfGap/RecO-like zinc finger 11
PheT/TilS domain Anticodon-binding domain of PheRS 11
post-HMGL domain-like Single hybrid motif 11
Formate/glycerate dehydrogenase catalytic domain-like ACT-like 11
PHP domain-like AF1531-like 11
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 11
ADC synthase Class I glutamine amidotransferase-like 11
PYP-like sensor domain (PAS domain) Homeodomain-like 11
Formyltransferase FMT C-terminal domain-like 11
Adenine nucleotide alpha hydrolases-like GAF domain-like 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain NAD(P)-linked oxidoreductase 11
Acyl-CoA N-acyltransferases (Nat) TPR-like 11
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 11
EAL domain-like CBS-domain pair 11
Sm-like ribonucleoproteins Sm-like ribonucleoproteins 11
TerB-like Chaperone J-domain 11
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 11
Translation proteins Initiation factor IF2/eIF5b, domain 3 11
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 11
Cobalamin (vitamin B12)-binding domain Methionine synthase activation domain-like 11
Hsp33 domain HSP33 redox switch-like 11
PUA domain-like alpha/beta knot 11
GreA transcript cleavage protein, N-terminal domain FKBP-like 11
Nucleic acid-binding proteins PheT/TilS domain 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 11
Carbamate kinase-like ACT-like 11
Cadherin-like Cadherin-like 11
2Fe-2S ferredoxin-like alpha-helical ferredoxin 11
Tex N-terminal region-like Nucleic acid-binding proteins 11
HD-domain/PDEase-like TGS-like 11
2Fe-2S ferredoxin-like ADC-like 11
Cytidine deaminase-like Dihydrofolate reductase-like 11
TPR-like Terpenoid cyclases/Protein prenyltransferases 11
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 11
alpha-helical ferredoxin Nucleotide-binding domain 11
P-loop containing nucleoside triphosphate hydrolases CarD-like 11
Nucleotide-diphospho-sugar transferases IpsF-like 11
Ribosomal protein S5 domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
PreATP-grasp domain PreATP-grasp domain 11
PHP14-like Phospholipase D/nuclease 11
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase alpha/beta-Hydrolases 11
RBP11-like subunits of RNA polymerase C-terminal domain of RNA polymerase alpha subunit 11
Nucleic acid-binding proteins Anticodon-binding domain of PheRS 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheW-like 11
Alpha-L RNA-binding motif S-adenosyl-L-methionine-dependent methyltransferases 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
RuvA domain 2-like RuvA domain 2-like 11
"Winged helix" DNA-binding domain LexA/Signal peptidase 11
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 11
Dihydropteroate synthetase-like Cobalamin (vitamin B12)-binding domain 11
NagB/RpiA/CoA transferase-like D-ribose-5-phosphate isomerase (RpiA), lid domain 11
Cobalamin (vitamin B12)-dependent enzymes Cobalamin (vitamin B12)-binding domain 11
FMN-binding split barrel UbiD C-terminal domain-like 11
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 11
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 11
NTF2-like FAD/NAD(P)-binding domain 11
Ribosomal protein L6 Ribosomal protein L6 11
C-terminal UvrC-binding domain of UvrB RuvA domain 2-like 11
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 11
Cytochrome c oxidase subunit I-like Cytochrome c oxidase subunit III-like 11
CBS-domain pair Nucleotide cyclase 11
Urease metallochaperone UreE, N-terminal domain Urease metallochaperone UreE, C-terminal domain 11
MOSC N-terminal domain-like PK beta-barrel domain-like 11
5' to 3' exonuclease, C-terminal subdomain Ribonuclease H-like 11
Ribonuclease H-like RuvA domain 2-like 11
Formate/glycerate dehydrogenase catalytic domain-like Serine metabolism enzymes domain 11
Xylose isomerase-like Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 11
GAF domain-like CheY-like 11
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 11
P-loop containing nucleoside triphosphate hydrolases HRDC-like 11
DNA topoisomerase I domain DNA breaking-rejoining enzymes 11
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 11
Galactose mutarotase-like Six-hairpin glycosidases 11
NAD(P)-binding Rossmann-fold domains TrkA C-terminal domain-like 11
DNA-glycosylase Nudix 11
Nucleic acid-binding proteins BRCT domain 11
Class II aaRS and biotin synthetases C-terminal domain of transcriptional repressors 11
Heme-dependent catalase-like Class I glutamine amidotransferase-like 11
beta-Roll Concanavalin A-like lectins/glucanases 11
Tryptophan synthase beta subunit-like PLP-dependent enzymes ACT-like 11
Adenine nucleotide alpha hydrolases-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
"Winged helix" DNA-binding domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11
MoeA N-terminal region -like MoeA C-terminal domain-like 11
Radical SAM enzymes Nitrogenase accessory factor-like 11
Glutamine synthetase/guanido kinase GatB/YqeY motif 11
Nucleotidylyl transferase tRNA-binding arm 11
Dihydropteroate synthetase-like Methionine synthase activation domain-like 11
AF0104/ALDC/Ptd012-like AF0104/ALDC/Ptd012-like 11
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 11
2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain Alkaline phosphatase-like 11
all-alpha NTP pyrophosphatases all-alpha NTP pyrophosphatases 11
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 11
P-loop containing nucleoside triphosphate hydrolases Smc hinge domain 11
Homocysteine S-methyltransferase Methionine synthase activation domain-like 11
Sigma3 and sigma4 domains of RNA polymerase sigma factors CheY-like 11
FAD-linked reductases, C-terminal domain Aminomethyltransferase beta-barrel domain 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 11
Homocysteine S-methyltransferase Methionine synthase domain 11
Nucleotide-binding domain Nucleotide-binding domain 11
YlxR-like L30e-like 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain ACT-like 11
Molybdenum cofactor biosynthesis proteins MoeA C-terminal domain-like 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
"Winged helix" DNA-binding domain S-adenosyl-L-methionine-dependent methyltransferases 11
lambda integrase-like, N-terminal domain DNA breaking-rejoining enzymes 11
N-terminal domain of MutM-like DNA repair proteins Glucocorticoid receptor-like (DNA-binding domain) 11
CO dehydrogenase ISP C-domain like CO dehydrogenase flavoprotein C-terminal domain-like 11
Nucleotidyltransferase TGS-like 11
Periplasmic binding protein-like II ACT-like 11
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 11
Riboflavin synthase domain-like Riboflavin synthase domain-like 11
Hairpin loop containing domain-like TPR-like 11
Ribonuclease H-like HRDC-like 11
Methylglyoxal synthase-like Cytidine deaminase-like 11
Glutathione synthetase ATP-binding domain-like Aldolase 11
Methionine synthase domain Methionine synthase activation domain-like 11
GAF domain-like Phosphohistidine domain 11
P-loop containing nucleoside triphosphate hydrolases TGS-like 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
Nucleotidyltransferase substrate binding subunit/domain Nucleotidyltransferase substrate binding subunit/domain 11
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 11
RNase III domain-like dsRNA-binding domain-like 11
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 11
Clc chloride channel CBS-domain pair 11
Dihydropteroate synthetase-like Methionine synthase domain 11
Isochorismatase-like hydrolases ACP-like 11
CheY-like Purine and uridine phosphorylases 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
NAD(P)-binding Rossmann-fold domains Serine metabolism enzymes domain 11
Ribonuclease PH domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
Nucleic acid-binding proteins Prokaryotic type KH domain (KH-domain type II) 11
Thioredoxin-like TPR-like 11
Adenine nucleotide alpha hydrolases-like Homodimeric domain of signal transducing histidine kinase 11
Cyclophilin-like Cyclophilin-like 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 11
6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 11
S13-like H2TH domain Glucocorticoid receptor-like (DNA-binding domain) 11
Homocysteine S-methyltransferase Dihydropteroate synthetase-like 11
PreATP-grasp domain Aldolase 11
NAD(P)-binding Rossmann-fold domains NAD(P)-linked oxidoreductase 11
Radical SAM enzymes RuvA domain 2-like 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
L9 N-domain-like Ribosomal protein L9 C-domain 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
beta-N-acetylhexosaminidase-like domain (Trans)glycosidases 11
LmbE-like Class I glutamine amidotransferase-like 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 11
Caspase-like P-loop containing nucleoside triphosphate hydrolases 11
lambda repressor-like DNA-binding domains LexA/Signal peptidase 11
Fumarate reductase respiratory complex transmembrane subunits Nucleotide cyclase 11
HD-domain/PDEase-like Nucleotidyltransferase 11
Ribonuclease H-like DNA/RNA polymerases 11
Nucleic acid-binding proteins DNA helicase RuvA subunit, C-terminal domain 11
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
PYP-like sensor domain (PAS domain) P-loop containing nucleoside triphosphate hydrolases 11
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 11
FAD-binding/transporter-associated domain-like Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain 11
(Trans)glycosidases NAD(P)-binding Rossmann-fold domains 11
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 11
PEP carboxykinase N-terminal domain PEP carboxykinase-like 11
FAD-linked oxidoreductase ALDH-like 11
PIN domain-like DNA/RNA polymerases 11
Ribonuclease H-like Nucleic acid-binding proteins 11
"Winged helix" DNA-binding domain Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain 11
Tex N-terminal region-like RuvA domain 2-like 11
Putative DNA-binding domain C-terminal effector domain of the bipartite response regulators 11
Trigger factor ribosome-binding domain FKBP-like 11
Eukaryotic type KH-domain (KH-domain type I) Nucleic acid-binding proteins 11
GAF domain-like Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 11
Nucleotidyltransferase Nucleotidyltransferase 11
NE0471 N-terminal domain-like lambda repressor-like DNA-binding domains 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
Class II aaRS and biotin synthetases Translation proteins 11
Hairpin loop containing domain-like Terpenoid cyclases/Protein prenyltransferases 11
GAF domain-like Phosphoenolpyruvate/pyruvate domain 11
Rhodanese/Cell cycle control phosphatase Acyl-CoA N-acyltransferases (Nat) 11
Creatinase/prolidase N-terminal domain Creatinase/prolidase N-terminal domain 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
Apolipoprotein A-I Apolipoprotein A-I 11
Translation proteins PRC-barrel domain 11
PK beta-barrel domain-like PK C-terminal domain-like 11
CarD-like TRCF domain-like 11
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 11
Prokaryotic type KH domain (KH-domain type II) Rad51 N-terminal domain-like 11
GIY-YIG endonuclease RuvA domain 2-like 11
FAD-linked reductases, C-terminal domain Folate-binding domain 11
Nucleic acid-binding proteins S-adenosyl-L-methionine-dependent methyltransferases 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphohistidine domain 11
FAD-binding/transporter-associated domain-like alpha-helical ferredoxin 11
P-loop containing nucleoside triphosphate hydrolases Sec63 N-terminal domain-like 11
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 11
E set domains E set domains 11
ClpP/crotonase 6-phosphogluconate dehydrogenase C-terminal domain-like 11
RuvA domain 2-like JAB1/MPN domain 11
Elongation factor Ts (EF-Ts), dimerisation domain Elongation factor Ts (EF-Ts), dimerisation domain 11
N-terminal domain of bifunctional PutA protein ALDH-like 11
Class II aaRS and biotin synthetases GAD domain-like 11
ClpP/crotonase NAD(P)-binding Rossmann-fold domains 11
N-terminal domain of bifunctional PutA protein FAD-linked oxidoreductase 11
(Phosphotyrosine protein) phosphatases II Metallo-hydrolase/oxidoreductase 11
Glutathione synthetase ATP-binding domain-like Succinyl-CoA synthetase domains 11
Nucleotide-diphospho-sugar transferases RmlC-like cupins 11
Transcription factor NusA, N-terminal domain Prokaryotic type KH domain (KH-domain type II) 11
HD-domain/PDEase-like ACT-like 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Eukaryotic type KH-domain (KH-domain type I) 11
FMN-linked oxidoreductases FAD/NAD(P)-binding domain 11
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 11
Arabinanase/levansucrase/invertase Concanavalin A-like lectins/glucanases 11
Aldolase Single hybrid motif 11
CoA-dependent acyltransferases Acetyl-CoA synthetase-like 11
Flavoproteins Ferredoxin reductase-like, C-terminal NADP-linked domain 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
YrdC/RibB RibA-like 11
Adenine nucleotide alpha hydrolases-like Adenine nucleotide alpha hydrolases-like 11
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 11
4Fe-4S ferredoxins ADC-like 11
Poly A polymerase C-terminal region-like ACT-like 11
Nudix "Winged helix" DNA-binding domain 11
Transcription factor NusA, N-terminal domain Nucleic acid-binding proteins 11
HRDC-like HRDC-like 11
Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Pyrimidine nucleoside phosphorylase C-terminal domain 11
Metallo-dependent phosphatases LysM domain 11
Bet v1-like Bet v1-like 11
Translation proteins Translation proteins 11
TolB, N-terminal domain Tricorn protease N-terminal domain 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
2Fe-2S ferredoxin-like FAD-binding/transporter-associated domain-like 11
MFS general substrate transporter MFS general substrate transporter 11
PreATP-grasp domain Methylglyoxal synthase-like 11
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 11
"Winged helix" DNA-binding domain Calcium-dependent phosphotriesterase 11
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 11
Nucleic acid-binding proteins GAD domain-like 11
Histidine-containing phosphotransfer domain, HPT domain Homodimeric domain of signal transducing histidine kinase 11
PheT/TilS domain Class II aaRS and biotin synthetases 11
PIN domain-like Ribonuclease H-like 11
Cadherin-like Autotransporter 11
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 11
Heme-dependent peroxidases Heme-dependent peroxidases 11
Rho N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
Nucleotide-binding domain FAD-linked reductases, C-terminal domain 11
PPK N-terminal domain-like Phospholipase D/nuclease 11
P-loop containing nucleoside triphosphate hydrolases ACT-like 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphoenolpyruvate/pyruvate domain 11
ISP domain Bet v1-like 11
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 11
FAD/NAD(P)-binding domain Nitrite/Sulfite reductase N-terminal domain-like 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 11
cAMP-binding domain-like FAD/NAD(P)-binding domain 11
Galactose mutarotase-like Galactose mutarotase-like 11
Rudiment single hybrid motif Aldolase 11
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 11
PGBD-like PGBD-like 11
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Pyrimidine nucleoside phosphorylase C-terminal domain 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
Rho N-terminal domain-like Nucleic acid-binding proteins 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) Homeodomain-like 11
Leukotriene A4 hydrolase N-terminal domain Metalloproteases ("zincins"), catalytic domain 11
YhbC-like, N-terminal domain YhbC-like, C-terminal domain 11
Glutathione synthetase ATP-binding domain-like Phosphoenolpyruvate/pyruvate domain 11
FAD/NAD(P)-binding domain 4Fe-4S ferredoxins 11
Acid phosphatase/Vanadium-dependent haloperoxidase Pectin lyase-like 11
Chemotaxis receptor methyltransferase CheR, N-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 11
Cupredoxins Cytochrome c 11
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 11
Galactose mutarotase-like (Trans)glycosidases 11
Homodimeric domain of signal transducing histidine kinase CheW-like 11
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 11
Pseudouridine synthase PUA domain-like 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
P-loop containing nucleoside triphosphate hydrolases Protein kinase-like (PK-like) 11
PLP-dependent transferases PLP-dependent transferases 11
Actin-like ATPase domain HD-domain/PDEase-like 11
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
C-terminal effector domain of the bipartite response regulators TPR-like 11
Aconitase B, N-terminal domain LeuD/IlvD-like 11
Fumarate reductase respiratory complex transmembrane subunits 2Fe-2S ferredoxin-like 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
PheT/TilS domain Putative DNA-binding domain 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 11
Rudiment single hybrid motif post-HMGL domain-like 11
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 11
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 11
P-loop containing nucleoside triphosphate hydrolases TrpR-like 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
Methionine synthase domain Cobalamin (vitamin B12)-binding domain 11
Single hybrid motif Thiamin diphosphate-binding fold (THDP-binding) 11
Aconitase B, N-terminal domain Aconitase iron-sulfur domain 11
RuvA domain 2-like BRCT domain 11
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 11
P-loop containing nucleoside triphosphate hydrolases C-terminal UvrC-binding domain of UvrB 11
PUA domain-like Ribosomal protein S5 domain 2-like 11
Flavoproteins Riboflavin synthase domain-like 11
N-terminal domain of DnaB helicase P-loop containing nucleoside triphosphate hydrolases 11
Carbon-nitrogen hydrolase Adenine nucleotide alpha hydrolases-like 11
dUTPase-like dUTPase-like 11
Translation proteins Ribosomal protein S5 domain 2-like 11
YjeF N-terminal domain-like Ribokinase-like 11
"Winged helix" DNA-binding domain Acyl-CoA N-acyltransferases (Nat) 11
2Fe-2S ferredoxin-like Nucleotide cyclase 11
Cadherin-like Fibronectin type III 11

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