SUPERFAMILY 1.75 HMM library and genome assignments server

Domain combination pairs in Alkalilimnicola ehrlichii MLHE-1

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

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Adjacent domain pairs graph

Graph of adjacent domain pairs.


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Domain combination pairs

678 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 2917
PYP-like sensor domain (PAS domain) Nucleotide cyclase 2720
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 2111
Nucleotide cyclase EAL domain-like 1815
PYP-like sensor domain (PAS domain) EAL domain-like 1513
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 157
PYP-like sensor domain (PAS domain) PYP-like sensor domain (PAS domain) 1411
CheY-like P-loop containing nucleoside triphosphate hydrolases 124
CheY-like Homeodomain-like 114
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 114
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 104
Actin-like ATPase domain Actin-like ATPase domain 103
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 104
Formate dehydrogenase/DMSO reductase, domains 1-3 ADC-like 94
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 92
CheY-like C-terminal effector domain of the bipartite response regulators 92
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB transmembrane domain 83
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 83
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB transmembrane domain 83
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 83
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 84
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 85
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 85
P-loop containing nucleoside triphosphate hydrolases Translation proteins 87
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 83
GAF domain-like PYP-like sensor domain (PAS domain) 88
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 74
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 74
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 63
Thiolase-like Thiolase-like 61
Homeodomain-like Tetracyclin repressor-like, C-terminal domain 61
GAF domain-like Nucleotide cyclase 66
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 63
"Winged helix" DNA-binding domain Periplasmic binding protein-like II 61
GroES-like NAD(P)-binding Rossmann-fold domains 61
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 66
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 63
cAMP-binding domain-like "Winged helix" DNA-binding domain 61
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 53
Adenine nucleotide alpha hydrolases-like Adenine nucleotide alpha hydrolases-like 51
GAF domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 54
Cytochrome c Cytochrome c 52
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 55
HAD-like Calcium ATPase, transmembrane domain M 54
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 54
Calcium ATPase, transduction domain A HAD-like 54
PurM N-terminal domain-like PurM C-terminal domain-like 52
gp5 N-terminal domain-like Phage fibre proteins 53
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 55
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 54
Ribosomal protein S5 domain 2-like P-loop containing nucleoside triphosphate hydrolases 55
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 52
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 41
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 43
Homeodomain-like Ribonuclease H-like 42
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 43
CheY-like EAL domain-like 44
HAMP domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 43
TPR-like TPR-like 43
PLP-binding barrel Alanine racemase C-terminal domain-like 43
ACT-like ACT-like 43
GAF domain-like EAL domain-like 44
cAMP-binding domain-like CBS-domain pair 41
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 43
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 43
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 44
Thioredoxin-like GST C-terminal domain-like 41
LeuD/IlvD-like Aconitase iron-sulfur domain 33
Metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 32
Triger factor/SurA peptide-binding domain-like FKBP-like 33
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 31
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 31
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 33
Phage tail proteins Phage fibre proteins 32
PreATP-grasp domain Rudiment single hybrid motif 31
Single hybrid motif CoA-dependent acyltransferases 33
Nucleotidyltransferase HD-domain/PDEase-like 32
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 32
RuvA domain 2-like Nucleic acid-binding proteins 33
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 33
Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase C-terminal domain-like 31
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 31
Phage tail proteins gp5 N-terminal domain-like 32
Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), C-terminal domain 33
Alpha-L RNA-binding motif Pseudouridine synthase 31
Translation proteins EF-G C-terminal domain-like 33
CheY-like Nucleotide cyclase 33
MurCD N-terminal domain MurD-like peptide ligases, peptide-binding domain 31
CheY-like PYP-like sensor domain (PAS domain) 33
Single hybrid motif Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 33
DnaK suppressor protein DksA, alpha-hairpin domain Glucocorticoid receptor-like (DNA-binding domain) 31
EspE N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 32
Nucleic acid-binding proteins Nucleic acid-binding proteins 33
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex CoA-dependent acyltransferases 33
MurCD N-terminal domain MurD-like peptide ligases, catalytic domain 31
Sm-like ribonucleoproteins Mechanosensitive channel protein MscS (YggB), C-terminal domain 33
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 33
GAF domain-like Homodimeric domain of signal transducing histidine kinase 33
HD-domain/PDEase-like ACT-like 32
Phage tail proteins Phage tail proteins 32
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 32
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 33
PYP-like sensor domain (PAS domain) Ribonuclease H-like 31
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 32
Rhodanese/Cell cycle control phosphatase Rhodanese/Cell cycle control phosphatase 32
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 33
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Adenine nucleotide alpha hydrolases-like 31
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 33
EF-G C-terminal domain-like EF-G C-terminal domain-like 33
Class II aaRS and biotin synthetases Class II aaRS ABD-related 33
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 33
Nucleotidyltransferase ACT-like 32
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 32
HMA, heavy metal-associated domain HAD-like 33
Aminopeptidase/glucanase lid domain Zn-dependent exopeptidases 31
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 22
Nqo1 middle domain-like Nqo1C-terminal domain-like 22
Nqo1 FMN-binding domain-like Nqo1C-terminal domain-like 22
Aldolase AFP III-like domain 21
6-phosphogluconate dehydrogenase C-terminal domain-like ClpP/crotonase 22
CBS-domain pair PYP-like sensor domain (PAS domain) 22
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 21
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 22
Phospholipase D/nuclease Phospholipase D/nuclease 22
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 22
Formyltransferase FMT C-terminal domain-like 22
"Winged helix" DNA-binding domain GntR ligand-binding domain-like 21
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 22
P-loop containing nucleoside triphosphate hydrolases MOP-like 21
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 22
DNA methylase specificity domain DNA methylase specificity domain 21
Nucleotide-binding domain Riboflavin synthase domain-like 22
"Winged helix" DNA-binding domain GAF domain-like 21
ISP domain Bet v1-like 22
GAF domain-like Homeodomain-like 21
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 22
Periplasmic binding protein-like II Lysozyme-like 22
6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 21
CBS-domain pair FAD-binding/transporter-associated domain-like 21
CheY-like GAF domain-like 22
MetI-like MetI-like 22
2Fe-2S ferredoxin-like ADC-like 21
Nucleotidyltransferase Poly A polymerase C-terminal region-like 21
Nucleotidyltransferase TGS-like 21
TGS-like ACT-like 21
CheW-like CheY-like 22
Ribosomal protein S5 domain 2-like EF-G C-terminal domain-like 22
RuBisCO, large subunit, small (N-terminal) domain RuBisCo, C-terminal domain 21
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 21
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 22
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 21
Trypsin-like serine proteases PDZ domain-like 22
4Fe-4S ferredoxins ADC-like 21
Glutathione synthetase ATP-binding domain-like Succinyl-CoA synthetase domains 22
HAMP domain-like Homodimeric domain of signal transducing histidine kinase 22
Nucleotidyltransferase Nucleotidyltransferase substrate binding subunit/domain 22
4Fe-4S ferredoxins Formate dehydrogenase/DMSO reductase, domains 1-3 21
Histidine-containing phosphotransfer domain, HPT domain Homodimeric domain of signal transducing histidine kinase 22
tRNA-binding arm Class II aaRS and biotin synthetases 21
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 22
Homodimeric domain of signal transducing histidine kinase CheW-like 22
Lysozyme-like beta-lactamase/transpeptidase-like 22
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 21
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 21
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
HD-domain/PDEase-like GAF domain-like 22
2Fe-2S ferredoxin-like Riboflavin synthase domain-like 21
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 21
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheW-like 22
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 21
RCC1/BLIP-II RCC1/BLIP-II 22
4Fe-4S ferredoxins Nitrite and sulphite reductase 4Fe-4S domain-like 21
2Fe-2S ferredoxin-like 4Fe-4S ferredoxins 21
GAF domain-like P-loop containing nucleoside triphosphate hydrolases 21
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 21
Chaperone J-domain HSP40/DnaJ peptide-binding domain 22
2Fe-2S ferredoxin-like Formate dehydrogenase/DMSO reductase, domains 1-3 21
2Fe-2S ferredoxin-like Ferredoxin reductase-like, C-terminal NADP-linked domain 21
NAD(P)-binding Rossmann-fold domains ACT-like 22
Glucocorticoid receptor-like (DNA-binding domain) P-loop containing nucleoside triphosphate hydrolases 22
Nitrite/Sulfite reductase N-terminal domain-like 4Fe-4S ferredoxins 21
Chemotaxis receptor methyltransferase CheR, N-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 22
S-adenosyl-L-methionine-dependent methyltransferases NAD(P)-binding Rossmann-fold domains 21
ThrRS/AlaRS common domain Class II aaRS and biotin synthetases 22
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 21
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 21
Calcium ATPase, transduction domain A Metal cation-transporting ATPase, ATP-binding domain N 21
Nqo1 FMN-binding domain-like Nqo1 middle domain-like 22
"Winged helix" DNA-binding domain Rhodanese/Cell cycle control phosphatase 21
NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains 22
alpha-helical ferredoxin Nucleotide-binding domain 22
HD-domain/PDEase-like TGS-like 21
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
NAD(P)-binding Rossmann-fold domains UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 21
Nucleic acid-binding proteins Translation proteins SH3-like domain 22
MgtE N-terminal domain-like CBS-domain pair 22
CBS-domain pair Nucleotide cyclase 22
TrkA C-terminal domain-like TrkA C-terminal domain-like 22
CBS-domain pair EAL domain-like 22
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 22
Penicillin binding protein dimerisation domain beta-lactamase/transpeptidase-like 21
PDZ domain-like ClpP/crotonase 22
Hedgehog/intein (Hint) domain Homing endonucleases 22
Metal cation-transporting ATPase, ATP-binding domain N Calcium ATPase, transmembrane domain M 21
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 22
HD-domain/PDEase-like Nucleotide cyclase 21
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 21
HCP-like HCP-like 22
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 22
PDZ domain-like PDZ domain-like 22
6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 22
P-loop containing nucleoside triphosphate hydrolases Restriction endonuclease-like 22
Histidine-containing phosphotransfer domain, HPT domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 22
NAD(P)-binding Rossmann-fold domains ClpP/crotonase 22
Metal cation-transporting ATPase, ATP-binding domain N HAD-like 21
alpha/beta-Hydrolases Galactose-binding domain-like 21
Histidine-containing phosphotransfer domain, HPT domain CheW-like 22
PurS-like Class I glutamine amidotransferase-like 11
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 11
Nucleic acid-binding proteins Anticodon-binding domain of PheRS 11
Lysozyme-like LysM domain 11
Methylesterase CheB, C-terminal domain PYP-like sensor domain (PAS domain) 11
GAF domain-like GAF domain-like 11
PurM N-terminal domain-like Class I glutamine amidotransferase-like 11
FAD/NAD(P)-binding domain HI0933 insert domain-like 11
PRTase-like PRTase-like 11
Cupredoxins Cupredoxins 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Eukaryotic type KH-domain (KH-domain type I) 11
Carbamate kinase-like ACT-like 11
P-loop containing nucleoside triphosphate hydrolases CBS-domain pair 11
Pseudouridine synthase PUA domain-like 11
Homo-oligomeric flavin-containing Cys decarboxylases, HFCD CoaB-like 11
Nucleotidylyl transferase tRNA-binding arm 11
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 11
Homing endonucleases Homing endonucleases 11
Bacterial fluorinating enzyme, N-terminal domain Bacterial fluorinating enzyme, C-terminal domain 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
Rho N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 11
Eukaryotic type KH-domain (KH-domain type I) Nucleic acid-binding proteins 11
Thioredoxin-like Nqo1 middle domain-like 11
MoaD/ThiS Rhodanese/Cell cycle control phosphatase 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
Nucleotidyltransferase substrate binding subunit/domain HD-domain/PDEase-like 11
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 11
Periplasmic binding protein-like II Nucleotide cyclase 11
GroEL equatorial domain-like GroEL apical domain-like 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Acetyl-CoA synthetase-like ACP-like 11
MoeA N-terminal region -like MoeA C-terminal domain-like 11
Homocysteine S-methyltransferase Dihydropteroate synthetase-like 11
RuvA domain 2-like DNA helicase RuvA subunit, C-terminal domain 11
NAD(P)-binding Rossmann-fold domains Glutamyl tRNA-reductase dimerization domain 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
FAD/NAD(P)-binding domain Nitrite/Sulfite reductase N-terminal domain-like 11
Sensory domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 11
Isochorismatase-like hydrolases ALDH-like 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
Heme-dependent peroxidases Heme-dependent peroxidases 11
Class II aaRS and biotin synthetases GAD domain-like 11
5' to 3' exonuclease, C-terminal subdomain DNA/RNA polymerases 11
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 11
PurM C-terminal domain-like Class I glutamine amidotransferase-like 11
CheY-like Methylesterase CheB, C-terminal domain 11
N-terminal domain of DnaB helicase lambda repressor-like DNA-binding domains 11
Ribosomal protein L6 Ribosomal protein L6 11
Molybdenum cofactor-binding domain Bet v1-like 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
GAF domain-like Phosphoenolpyruvate/pyruvate domain 11
L9 N-domain-like Ribosomal protein L9 C-domain 11
Transmembrane di-heme cytochromes a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 11
FAD-binding/transporter-associated domain-like alpha-helical ferredoxin 11
Sensory domain-like HAMP domain-like 11
Adenine nucleotide alpha hydrolases-like PheT/TilS domain 11
EAL domain-like HD-domain/PDEase-like 11
FMT C-terminal domain-like ClpP/crotonase 11
ParB/Sulfiredoxin KorB DNA-binding domain-like 11
Folate-binding domain Aminomethyltransferase beta-barrel domain 11
Cobalamin (vitamin B12)-binding domain Methionine synthase activation domain-like 11
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 11
Acylphosphatase/BLUF domain-like YrdC/RibB 11
E set domains Glycosyl hydrolase domain 11
P-loop containing nucleoside triphosphate hydrolases LexA/Signal peptidase 11
Glutathione synthetase ATP-binding domain-like Phosphoenolpyruvate/pyruvate domain 11
Cytochrome c oxidase subunit II-like, transmembrane region Cupredoxins 11
E set domains (Trans)glycosidases 11
Zn-dependent exopeptidases LysM domain 11
Nqo1 FMN-binding domain-like alpha-helical ferredoxin 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 11
Glutamyl tRNA-reductase catalytic, N-terminal domain NAD(P)-binding Rossmann-fold domains 11
TPR-like UDP-Glycosyltransferase/glycogen phosphorylase 11
Trigger factor ribosome-binding domain FKBP-like 11
RBP11-like subunits of RNA polymerase C-terminal domain of RNA polymerase alpha subunit 11
Periplasmic binding protein-like II ACT-like 11
Zinc beta-ribbon DNA primase DnaG, C-terminal domain 11
Rhodanese/Cell cycle control phosphatase Activating enzymes of the ubiquitin-like proteins 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Nucleic acid-binding proteins 11
Histidine-containing phosphotransfer domain, HPT domain CheY-like 11
Formyltransferase ClpP/crotonase 11
Cryptochrome/photolyase, N-terminal domain Cryptochrome/photolyase FAD-binding domain 11
P-loop containing nucleoside triphosphate hydrolases TrpR-like 11
TrkA C-terminal domain-like FAD-binding/transporter-associated domain-like 11
P-loop containing nucleoside triphosphate hydrolases Smc hinge domain 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
YhbC-like, N-terminal domain YhbC-like, C-terminal domain 11
Prokaryotic type KH domain (KH-domain type II) Rad51 N-terminal domain-like 11
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 11
RCC1/BLIP-II Galactose oxidase, central domain 11
Flavoproteins Riboflavin synthase domain-like 11
Ribonuclease H-like DNA/RNA polymerases 11
TPR-like S-adenosyl-L-methionine-dependent methyltransferases 11
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
Nitrite/Sulfite reductase N-terminal domain-like Nitrite/Sulfite reductase N-terminal domain-like 11
Dihydropteroate synthetase-like Cobalamin (vitamin B12)-binding domain 11
Prim-pol domain P-loop containing nucleoside triphosphate hydrolases 11
Class II aaRS and biotin synthetases Translation proteins 11
C-terminal effector domain of the bipartite response regulators Nucleotide cyclase 11
Nitrite and sulphite reductase 4Fe-4S domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
Methylesterase CheB, C-terminal domain Chemotaxis receptor methyltransferase CheR, N-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases TGS-like 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
S-adenosyl-L-methionine-dependent methyltransferases PYP-like sensor domain (PAS domain) 11
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 11
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 11
Nucleic acid-binding proteins BRCT domain 11
FAD-binding/transporter-associated domain-like Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain 11
PUA domain-like alpha/beta knot 11
alpha-helical ferredoxin alpha-helical ferredoxin 11
Elongation factor Ts (EF-Ts), dimerisation domain Elongation factor Ts (EF-Ts), dimerisation domain 11
Methylglyoxal synthase-like Cytidine deaminase-like 11
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 11
Homocysteine S-methyltransferase Methionine synthase activation domain-like 11
Thioredoxin-like Nqo1 FMN-binding domain-like 11
C-terminal effector domain of the bipartite response regulators P-loop containing nucleoside triphosphate hydrolases 11
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 11
Translation proteins PRC-barrel domain 11
Single hybrid motif Single hybrid motif 11
Peptidase/esterase 'gauge' domain alpha/beta-Hydrolases 11
NAD(P)-binding Rossmann-fold domains Tetrapyrrole methylase 11
Aconitase B, N-terminal domain LeuD/IlvD-like 11
lambda repressor-like DNA-binding domains LexA/Signal peptidase 11
Actin-like ATPase domain HD-domain/PDEase-like 11
N-terminal domain of MutM-like DNA repair proteins Glucocorticoid receptor-like (DNA-binding domain) 11
P-loop containing nucleoside triphosphate hydrolases C-terminal UvrC-binding domain of UvrB 11
FMN-binding split barrel UbiD C-terminal domain-like 11
5' to 3' exonuclease, C-terminal subdomain Ribonuclease H-like 11
PPK N-terminal domain-like Phospholipase D/nuclease 11
Nucleic acid-binding proteins Prokaryotic type KH domain (KH-domain type II) 11
Methionine synthase domain Cobalamin (vitamin B12)-binding domain 11
Epsilon subunit of F1F0-ATP synthase N-terminal domain Epsilon subunit of F1F0-ATP synthase C-terminal domain 11
FGAM synthase PurL, linker domain PurM N-terminal domain-like 11
Protein kinase-like (PK-like) P-loop containing nucleoside triphosphate hydrolases 11
Formate/glycerate dehydrogenase catalytic domain-like ACT-like 11
PGBD-like L,D-transpeptidase catalytic domain-like 11
GAF domain-like Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 11
P-loop containing nucleoside triphosphate hydrolases CarD-like 11
Carbamate kinase-like PUA domain-like 11
GAF domain-like Phosphohistidine domain 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
TGS-like Class II aaRS ABD-related 11
DNA-glycosylase Nudix 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FMN-linked oxidoreductases 11
Aldolase post-HMGL domain-like 11
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 11
CarD-like TRCF domain-like 11
Rad51 N-terminal domain-like Rad51 N-terminal domain-like 11
Fe-S cluster assembly (FSCA) domain-like P-loop containing nucleoside triphosphate hydrolases 11
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
C-terminal UvrC-binding domain of UvrB RuvA domain 2-like 11
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 11
FGAM synthase PurL, linker domain Class I glutamine amidotransferase-like 11
Ribbon-helix-helix ACT-like 11
OMPA-like Porins 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 11
Homing endonucleases PFL-like glycyl radical enzymes 11
TGS-like Class II aaRS and biotin synthetases 11
CO dehydrogenase molybdoprotein N-domain-like Molybdenum cofactor-binding domain 11
4Fe-4S ferredoxins 4Fe-4S ferredoxins 11
PheT/TilS domain Putative DNA-binding domain 11
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 11
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 11
MoaD/ThiS Activating enzymes of the ubiquitin-like proteins 11
Acyl-CoA N-acyltransferases (Nat) Carbon-nitrogen hydrolase 11
P-loop containing nucleoside triphosphate hydrolases HRDC-like 11
PUA domain-like Ribosomal protein S5 domain 2-like 11
NagB/RpiA/CoA transferase-like D-ribose-5-phosphate isomerase (RpiA), lid domain 11
Ribosomal protein S5 domain 2-like HSP90 C-terminal domain 11
Tropomyosin OmpA-like 11
Nucleotidyltransferase substrate binding subunit/domain ACT-like 11
YbaK/ProRS associated domain Class II aaRS ABD-related 11
Nudix "Winged helix" DNA-binding domain 11
Methylated DNA-protein cysteine methyltransferase domain Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
Single hybrid motif FAD/NAD(P)-binding domain 11
Ribonuclease H-like Nucleic acid-binding proteins 11
Nitrous oxide reductase, N-terminal domain Cupredoxins 11
Dihydropteroate synthetase-like Methionine synthase activation domain-like 11
Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha) Thioredoxin-like 11
CheC-like Surface presentation of antigens (SPOA) 11
PHP domain-like AF1531-like 11
Flavoproteins Ferredoxin reductase-like, C-terminal NADP-linked domain 11
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 11
UDP-Glycosyltransferase/glycogen phosphorylase S-adenosyl-L-methionine-dependent methyltransferases 11
Ribokinase-like Nucleotidylyl transferase 11
Methionine synthase domain Methionine synthase activation domain-like 11
PHP14-like Phospholipase D/nuclease 11
Ribonuclease H-like RuvA domain 2-like 11
PheT/TilS domain Class II aaRS and biotin synthetases 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphohistidine domain 11
Adenine nucleotide alpha hydrolases-like MesJ substrate recognition domain-like 11
ACT-like Formyltransferase 11
L30e-like alpha/beta knot 11
PreATP-grasp domain PreATP-grasp domain 11
Sensory domain-like Methyl-accepting chemotaxis protein (MCP) signaling domain 11
Isocitrate/Isopropylmalate dehydrogenase-like CBS-domain pair 11
PreATP-grasp domain Methylglyoxal synthase-like 11
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 11
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 11
GIY-YIG endonuclease RuvA domain 2-like 11
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
GAF domain-like C-terminal effector domain of the bipartite response regulators 11
YrdC/RibB RibA-like 11
Band 7/SPFH domain Band 7/SPFH domain 11
Thioredoxin-like Nqo1C-terminal domain-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheY-like 11
Pyruvate-ferredoxin oxidoreductase, PFOR, domain III Thiamin diphosphate-binding fold (THDP-binding) 11
Ribonuclease PH domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
P-loop containing nucleoside triphosphate hydrolases Hedgehog/intein (Hint) domain 11
Translation proteins ThrRS/AlaRS common domain 11
NTF2-like Nucleotide cyclase 11
Nucleic acid-binding proteins Putative DNA-binding domain 11
LysM domain LysM domain 11
2Fe-2S ferredoxin-like CO dehydrogenase ISP C-domain like 11
Succinyl-CoA synthetase domains Acyl-CoA N-acyltransferases (Nat) 11
Bacterial muramidases Lysozyme-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 11
NAD(P)-binding Rossmann-fold domains Isocitrate/Isopropylmalate dehydrogenase-like 11
P-loop containing nucleoside triphosphate hydrolases Acyl-CoA N-acyltransferases (Nat) 11
PurS-like PurM C-terminal domain-like 11
Transcription factor NusA, N-terminal domain Prokaryotic type KH domain (KH-domain type II) 11
Chorismate mutase II Periplasmic binding protein-like II 11
DNA primase core DNA primase DnaG, C-terminal domain 11
FAD-linked oxidases, C-terminal domain alpha-helical ferredoxin 11
Translation proteins Translation proteins 11
Translation proteins Initiation factor IF2/eIF5b, domain 3 11
Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 11
NAD(P)-binding Rossmann-fold domains TrkA C-terminal domain-like 11
RuvA domain 2-like BRCT domain 11
Mss4-like Peptide methionine sulfoxide reductase 11
Siroheme synthase middle domains-like Tetrapyrrole methylase 11
Sensory domain-like Nucleotide cyclase 11
Succinyl-CoA synthetase domains Succinyl-CoA synthetase domains 11
ACP-like Glycerol-3-phosphate (1)-acyltransferase 11
NAD(P)-binding Rossmann-fold domains Siroheme synthase middle domains-like 11
Nucleotidyltransferase Nucleotidyltransferase 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
Glutathione synthetase ATP-binding domain-like Acyl-CoA N-acyltransferases (Nat) 11
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 11
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 11
TrmE connector domain P-loop containing nucleoside triphosphate hydrolases 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain ACT-like 11
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 11
Aconitase B, N-terminal domain Aconitase iron-sulfur domain 11
P-loop containing nucleoside triphosphate hydrolases Homing endonucleases 11
Thioredoxin-like TPR-like 11
Histidine-containing phosphotransfer domain, HPT domain Histidine-containing phosphotransfer domain, HPT domain 11
Pyruvate-ferredoxin oxidoreductase, PFOR, domain III TK C-terminal domain-like 11
Urease metallochaperone UreE, N-terminal domain Urease metallochaperone UreE, C-terminal domain 11
Pili subunits GspK insert domain-like 11
THUMP domain-like Adenine nucleotide alpha hydrolases-like 11
2Fe-2S ferredoxin-like alpha-helical ferredoxin 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Alpha subunit of glutamate synthase, C-terminal domain 11
PIN domain-like DNA/RNA polymerases 11
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 11
GroEL equatorial domain-like GroEL-intermediate domain like 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleotidylyl transferase 11
Zinc beta-ribbon DNA primase core 11
Rho N-terminal domain-like Nucleic acid-binding proteins 11
Putative DNA-binding domain P-loop containing nucleoside triphosphate hydrolases 11
CheY-like HD-domain/PDEase-like 11
NagB/RpiA/CoA transferase-like alpha-helical ferredoxin 11
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 11
PurS-like FGAM synthase PurL, linker domain 11
Tryptophan synthase beta subunit-like PLP-dependent enzymes ACT-like 11
ClpP/crotonase NfeD domain-like 11
Hedgehog/intein (Hint) domain Hedgehog/intein (Hint) domain 11
Riboflavin synthase domain-like Riboflavin synthase domain-like 11
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 11
Carbon-nitrogen hydrolase Adenine nucleotide alpha hydrolases-like 11
CBS-domain pair MgtE membrane domain-like 11
S13-like H2TH domain Glucocorticoid receptor-like (DNA-binding domain) 11
"Winged helix" DNA-binding domain LexA/Signal peptidase 11
N-terminal domain of DnaB helicase P-loop containing nucleoside triphosphate hydrolases 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11
Homocysteine S-methyltransferase Methionine synthase domain 11
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 11
HAMP domain-like PYP-like sensor domain (PAS domain) 11
Putative DNA-binding domain Initiation factor IF2/eIF5b, domain 3 11
N-terminal domain of DnaB helicase Homing endonucleases 11
Nucleic acid-binding proteins GAD domain-like 11
Nucleotide-diphospho-sugar transferases RmlC-like cupins 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase HSP90 C-terminal domain 11
FMN-linked oxidoreductases Alpha subunit of glutamate synthase, C-terminal domain 11
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 11
EreA/ChaN-like PDZ domain-like 11
Transcription factor NusA, N-terminal domain Rad51 N-terminal domain-like 11
lambda repressor-like DNA-binding domains Homing endonucleases 11
Nucleic acid-binding proteins PheT/TilS domain 11
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 11
Prokaryotic type KH domain (KH-domain type II) Prokaryotic type KH domain (KH-domain type II) 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
Nucleic acid-binding proteins S-adenosyl-L-methionine-dependent methyltransferases 11
RuvA domain 2-like MCP/YpsA-like 11
PEP carboxykinase N-terminal domain PEP carboxykinase-like 11
Chemotaxis receptor methyltransferase CheR, N-terminal domain PYP-like sensor domain (PAS domain) 11
Nucleic acid-binding proteins DNA helicase RuvA subunit, C-terminal domain 11
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 11
Acyl-CoA N-acyltransferases (Nat) Acyl-CoA N-acyltransferases (Nat) 11
Homocysteine S-methyltransferase Cobalamin (vitamin B12)-binding domain 11
Hsp33 domain HSP33 redox switch-like 11
GreA transcript cleavage protein, N-terminal domain FKBP-like 11
N-terminal domain of bifunctional PutA protein ALDH-like 11
E set domains E set domains 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
Single hybrid motif FAD/NAD-linked reductases, dimerisation (C-terminal) domain 11
Lysozyme-like PGBD-like 11
Cytidine deaminase-like Dihydrofolate reductase-like 11
Putative DNA-binding domain Translation proteins 11
Rubredoxin-like FAD/NAD(P)-binding domain 11
S-adenosyl-L-methionine-dependent methyltransferases S-adenosyl-L-methionine-dependent methyltransferases 11
lambda integrase-like, N-terminal domain DNA breaking-rejoining enzymes 11
HesB-like domain Fe-S cluster assembly (FSCA) domain-like 11
Clc chloride channel CBS-domain pair 11
MoeA N-terminal region -like Molybdenum cofactor biosynthesis proteins 11
Thioredoxin-like Six-hairpin glycosidases 11
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 11
Diaminopimelate epimerase-like Diaminopimelate epimerase-like 11
CBS-domain pair CBS-domain pair 11
Methylesterase CheB, C-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
FGAM synthase PurL, linker domain PurM C-terminal domain-like 11
R1 subunit of ribonucleotide reductase, N-terminal domain PFL-like glycyl radical enzymes 11
Class II aaRS and biotin synthetases YbaK/ProRS associated domain 11
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 11
PurS-like PurM N-terminal domain-like 11
FAD/NAD(P)-binding domain Nitrite and sulphite reductase 4Fe-4S domain-like 11
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 11
NAD(P)-binding Rossmann-fold domains Glutathione synthetase ATP-binding domain-like 11
alpha/beta-Hydrolases Nucleotide-diphospho-sugar transferases 11
Chorismate mutase II ACT-like 11
Hedgehog/intein (Hint) domain lambda repressor-like DNA-binding domains 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
Nucleotide cyclase P-loop containing nucleoside triphosphate hydrolases 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphoenolpyruvate/pyruvate domain 11
P-loop containing nucleoside triphosphate hydrolases lambda repressor-like DNA-binding domains 11
"Winged helix" DNA-binding domain Class II aaRS and biotin synthetases 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
PUA domain-like S-adenosyl-L-methionine-dependent methyltransferases 11
Glutamine synthetase/guanido kinase GatB/YqeY motif 11
RuvA domain 2-like JAB1/MPN domain 11
Tex N-terminal region-like Nucleic acid-binding proteins 11
Tex N-terminal region-like Ribonuclease H-like 11
RuvA domain 2-like RuvA domain 2-like 11
TerB-like Chaperone J-domain 11
Periplasmic binding protein-like II EAL domain-like 11
DsbC/DsbG N-terminal domain-like Thioredoxin-like 11
Dihydropteroate synthetase-like Methionine synthase domain 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
Leukotriene A4 hydrolase N-terminal domain Metalloproteases ("zincins"), catalytic domain 11
NAD(P)-binding Rossmann-fold domains Acyl-CoA N-acyltransferases (Nat) 11
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 11
Translation proteins Ribosomal protein S5 domain 2-like 11
MgtE N-terminal domain-like MgtE membrane domain-like 11
WD40 repeat-like MetI-like 11
Macro domain-like Zn-dependent exopeptidases 11
PPK N-terminal domain-like PHP14-like 11
cAMP-binding domain-like HD-domain/PDEase-like 11
PIN domain-like P-loop containing nucleoside triphosphate hydrolases 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 11
all-alpha NTP pyrophosphatases all-alpha NTP pyrophosphatases 11
YjeF N-terminal domain-like Ribokinase-like 11
Molybdenum cofactor biosynthesis proteins MoeA C-terminal domain-like 11
Hedgehog/intein (Hint) domain PFL-like glycyl radical enzymes 11
Nucleotidylyl transferase Riboflavin kinase-like 11
ACT-like HAD-like 11
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 11
Hypothetical protein TM0160 PDZ domain-like 11
Nucleotidylyl transferase Nucleic acid-binding proteins 11
Putative DNA-binding domain Anticodon-binding domain of PheRS 11
CO dehydrogenase molybdoprotein N-domain-like Bet v1-like 11
RNase III domain-like dsRNA-binding domain-like 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
DNA ligase/mRNA capping enzyme, catalytic domain RuvA domain 2-like 11
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 11
HMA, heavy metal-associated domain HMA, heavy metal-associated domain 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 11
GroEL-intermediate domain like GroEL apical domain-like 11
FliG FliG 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Nucleic acid-binding proteins 11
Voltage-gated potassium channels NAD(P)-binding Rossmann-fold domains 11
alpha/beta-Hydrolases alpha/beta-Hydrolases 11
Enolase N-terminal domain-like Enolase C-terminal domain-like 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
PK beta-barrel domain-like PK C-terminal domain-like 11
beta-lactamase/transpeptidase-like Penicillin-binding protein associated domain 11
TolB, N-terminal domain Tricorn protease N-terminal domain 11
Thioesterase/thiol ester dehydrase-isomerase Isocitrate/Isopropylmalate dehydrogenase-like 11
FAD-linked oxidoreductase ALDH-like 11
PYP-like sensor domain (PAS domain) P-loop containing nucleoside triphosphate hydrolases 11
GIY-YIG endonuclease C-terminal UvrC-binding domain of UvrB 11
UROD/MetE-like UROD/MetE-like 11
Homodimeric domain of signal transducing histidine kinase CheY-like 11
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 11
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 11
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 11
MFS general substrate transporter MFS general substrate transporter 11
PheT/TilS domain Anticodon-binding domain of PheRS 11
Nucleotidyltransferase substrate binding subunit/domain Nucleotidyltransferase substrate binding subunit/domain 11
Fic-like "Winged helix" DNA-binding domain 11
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 11
(Trans)glycosidases Glycosyl hydrolase domain 11
Aldehyde ferredoxin oxidoreductase, N-terminal domain Aldehyde ferredoxin oxidoreductase, C-terminal domains 11
MesJ substrate recognition domain-like PheT/TilS domain 11
DNA clamp DNA clamp 11
Sensory domain-like EAL domain-like 11
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleic acid-binding proteins 11
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 11
Sensory domain-like Homodimeric domain of signal transducing histidine kinase 11
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Glutamyl tRNA-reductase catalytic, N-terminal domain Glutamyl tRNA-reductase dimerization domain 11
PYP-like sensor domain (PAS domain) Homeodomain-like 11
Barwin-like endoglucanases Sporulation related repeat 11
FKBP-like FKBP-like 11
Acetyl-CoA synthetase-like Glycerol-3-phosphate (1)-acyltransferase 11
Ribosomal protein S5 domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
TGS-like ThrRS/AlaRS common domain 11
Aminoacid dehydrogenase-like, N-terminal domain Isocitrate/Isopropylmalate dehydrogenase-like 11
lambda repressor-like DNA-binding domains Cyanase C-terminal domain 11
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 11
N-terminal domain of DnaB helicase Hedgehog/intein (Hint) domain 11
PIN domain-like Ribonuclease H-like 11
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 11
Nucleotide-binding domain Ferredoxin reductase-like, C-terminal NADP-linked domain 11
Transcription factor NusA, N-terminal domain Nucleic acid-binding proteins 11
FAD-binding/transporter-associated domain-like CO dehydrogenase flavoprotein C-terminal domain-like 11
Invasin/intimin cell-adhesion fragments Invasin/intimin cell-adhesion fragments 11
Nudix Thiamin phosphate synthase 11
Sensory domain-like PYP-like sensor domain (PAS domain) 11
PHP domain-like P-loop containing nucleoside triphosphate hydrolases 11
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 11
N-terminal domain of bifunctional PutA protein FAD-linked oxidoreductase 11
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 11
Tex N-terminal region-like RuvA domain 2-like 11
Nucleic acid-binding proteins Rad51 N-terminal domain-like 11
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 11
Carbamate kinase-like Acyl-CoA N-acyltransferases (Nat) 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
S-adenosyl-L-methionine-dependent methyltransferases MFS general substrate transporter 11

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