SUPERFAMILY 1.75 HMM library and genome assignments server

Domain combination pairs in Agrobacterium vitis S4

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

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Adjacent domain pairs graph

Graph of adjacent domain pairs.


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Domain combination pairs

742 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 6415
"Winged helix" DNA-binding domain Periplasmic binding protein-like II 522
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 4122
P-loop containing nucleoside triphosphate hydrolases MOP-like 392
HAMP domain-like Methyl-accepting chemotaxis protein (MCP) signaling domain 305
"Winged helix" DNA-binding domain GntR ligand-binding domain-like 262
Homeodomain-like Tetracyclin repressor-like, C-terminal domain 211
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 214
Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase C-terminal domain-like 203
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 205
Composite domain of metallo-dependent hydrolases Metallo-dependent hydrolases 196
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 182
GroES-like NAD(P)-binding Rossmann-fold domains 174
Actin-like ATPase domain Actin-like ATPase domain 168
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 167
lambda repressor-like DNA-binding domains Periplasmic binding protein-like I 151
Homeodomain-like Homeodomain-like 155
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 154
Nucleotide cyclase EAL domain-like 157
CheY-like C-terminal effector domain of the bipartite response regulators 142
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheY-like 1410
Glutathione synthetase ATP-binding domain-like PreATP-grasp domain 147
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 141
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 146
"Winged helix" DNA-binding domain Dimeric alpha+beta barrel 141
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 1412
PYP-like sensor domain (PAS domain) PYP-like sensor domain (PAS domain) 1411
Thioredoxin-like GST C-terminal domain-like 131
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 124
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 122
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB transmembrane domain 124
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB transmembrane domain 124
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 124
Homodimeric domain of signal transducing histidine kinase CheY-like 129
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 124
"Winged helix" DNA-binding domain GAF domain-like 111
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 1110
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 104
PreATP-grasp domain Rudiment single hybrid motif 104
(Trans)glycosidases Glycosyl hydrolase domain 107
Pheromone-binding domain of LuxR-like quorum-sensing transcription factors C-terminal effector domain of the bipartite response regulators 91
Thiolase-like Thiolase-like 92
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 94
"Winged helix" DNA-binding domain Actin-like ATPase domain 93
ParB/Sulfiredoxin KorB DNA-binding domain-like 92
PYP-like sensor domain (PAS domain) CheY-like 86
CoA-dependent acyltransferases ACP-like 86
CoA-dependent acyltransferases CoA-dependent acyltransferases 86
PYP-like sensor domain (PAS domain) Nucleotide cyclase 86
Acetyl-CoA synthetase-like ACP-like 86
P-loop containing nucleoside triphosphate hydrolases Translation proteins 87
cAMP-binding domain-like "Winged helix" DNA-binding domain 71
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 74
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 73
PLP-binding barrel Alanine racemase C-terminal domain-like 71
CoA-dependent acyltransferases Acetyl-CoA synthetase-like 75
Calcium ATPase, transduction domain A HAD-like 65
Phage tail proteins Phage fibre proteins 63
Phage tail proteins Phage tail proteins 63
gp5 N-terminal domain-like Phage fibre proteins 63
PYP-like sensor domain (PAS domain) Methyl-accepting chemotaxis protein (MCP) signaling domain 63
HAD-like Calcium ATPase, transmembrane domain M 65
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 65
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 63
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 63
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 66
Phage tail proteins gp5 N-terminal domain-like 63
lambda integrase-like, N-terminal domain DNA breaking-rejoining enzymes 62
E set domains (Trans)glycosidases 54
ACP-like NAD(P)-binding Rossmann-fold domains 54
CheY-like CheY-like 55
Class I glutamine amidotransferase-like Homeodomain-like 52
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 53
ACP-like ACP-like 54
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 52
"Winged helix" DNA-binding domain NagB/RpiA/CoA transferase-like 51
Rudiment single hybrid motif Single hybrid motif 53
Formate dehydrogenase/DMSO reductase, domains 1-3 ADC-like 53
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 53
Regulatory protein AraC Homeodomain-like 53
Glutathione synthetase ATP-binding domain-like Single hybrid motif 53
CheY-like P-loop containing nucleoside triphosphate hydrolases 52
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 51
"Winged helix" DNA-binding domain Chorismate lyase-like 52
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 54
PreATP-grasp domain Single hybrid motif 53
Thiolase-like FabD/lysophospholipase-like 54
Homeodomain-like SIS domain 51
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 54
Homeodomain-like Ribonuclease H-like 52
PH0987 N-terminal domain-like Cyclophilin-like 43
Acetyl-CoA synthetase-like Acetyl-CoA synthetase-like 43
Probable ACP-binding domain of malonyl-CoA ACP transacylase ACP-like 43
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 44
TPR-like UDP-Glycosyltransferase/glycogen phosphorylase 42
Thiolase-like ACP-like 43
FAD-binding/transporter-associated domain-like CO dehydrogenase flavoprotein C-terminal domain-like 43
lambda repressor-like DNA-binding domains LexA/Signal peptidase 41
Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 42
E set domains Glycosyl hydrolase domain 43
Folate-binding domain Aminomethyltransferase beta-barrel domain 43
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 43
FabD/lysophospholipase-like ACP-like 43
Phospholipase D/nuclease Phospholipase D/nuclease 44
beta-Roll beta-Roll 44
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 41
NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains 43
MetI-like MetI-like 42
Sensory domain-like HAMP domain-like 44
2Fe-2S ferredoxin-like CO dehydrogenase ISP C-domain like 42
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 44
P-loop containing nucleoside triphosphate hydrolases Hypothetical protein YjiA, C-terminal domain 41
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein S5 domain 2-like 44
RmlC-like cupins Homeodomain-like 42
PYP-like sensor domain (PAS domain) EAL domain-like 43
Thiolase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 43
Nucleic acid-binding proteins Nucleic acid-binding proteins 44
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 43
Thiolase-like NAD(P)-binding Rossmann-fold domains 43
FabD/lysophospholipase-like NAD(P)-binding Rossmann-fold domains 43
TPR-like TPR-like 43
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 43
HAMP domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 42
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 42
Nucleotidyltransferase Nucleotidyltransferase substrate binding subunit/domain 43
HMA, heavy metal-associated domain HAD-like 43
HAMP domain-like Homodimeric domain of signal transducing histidine kinase 42
Lysozyme-like beta-lactamase/transpeptidase-like 43
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 42
PGBD-like L,D-transpeptidase catalytic domain-like 43
CO dehydrogenase molybdoprotein N-domain-like Molybdenum cofactor-binding domain 42
Probable ACP-binding domain of malonyl-CoA ACP transacylase NAD(P)-binding Rossmann-fold domains 43
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 42
CheY-like Homeodomain-like 41
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 43
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 42
FAD/NAD(P)-binding domain Folate-binding domain 32
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 32
beta-Galactosidase/glucuronidase domain beta-Galactosidase/glucuronidase domain 32
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 31
Cytochrome c Cytochrome c 32
TPR-like C-terminal effector domain of the bipartite response regulators 33
PDZ domain-like PDZ domain-like 33
Alpha-L RNA-binding motif Pseudouridine synthase 32
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 31
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 31
GAF domain-like GAF domain-like 32
Galactose-binding domain-like (Trans)glycosidases 32
PK beta-barrel domain-like PK C-terminal domain-like 31
MalF N-terminal region-like MetI-like 31
Nucleic acid-binding proteins RuvA domain 2-like 33
GAF domain-like CheY-like 32
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 32
Translation proteins EF-G C-terminal domain-like 33
Trypsin-like serine proteases PDZ domain-like 33
GAF domain-like PYP-like sensor domain (PAS domain) 32
EF-G C-terminal domain-like EF-G C-terminal domain-like 33
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 33
Glycoside hydrolase/deacetylase Galactose mutarotase-like 31
Cupredoxins Cupredoxins 33
Triger factor/SurA peptide-binding domain-like FKBP-like 33
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 31
Class II aaRS and biotin synthetases Class II aaRS ABD-related 32
Galactose-binding domain-like beta-Galactosidase/glucuronidase domain 32
ACT-like ACT-like 33
Nucleotide-binding domain FAD-linked reductases, C-terminal domain 32
FAD/NAD(P)-binding domain Aminomethyltransferase beta-barrel domain 32
Families 57/38 glycoside transferase middle domain Galactose mutarotase-like 31
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 33
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 32
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 33
beta-Galactosidase/glucuronidase domain (Trans)glycosidases 32
Sensory domain-like Methyl-accepting chemotaxis protein (MCP) signaling domain 33
Glycoside hydrolase/deacetylase Families 57/38 glycoside transferase middle domain 31
"Winged helix" DNA-binding domain PLP-dependent transferases 31
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 32
lambda repressor-like DNA-binding domains RmlC-like cupins 32
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 33
Methylated DNA-protein cysteine methyltransferase domain Methylated DNA-protein cysteine methyltransferase, C-terminal domain 33
TPR-like P-loop containing nucleoside triphosphate hydrolases 33
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 32
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 32
Chemotaxis receptor methyltransferase CheR, N-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 31
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 32
L30e-like alpha/beta knot 31
PurM N-terminal domain-like PurM C-terminal domain-like 32
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 32
Lysozyme-like PGBD-like 31
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 31
P-loop containing nucleoside triphosphate hydrolases Restriction endonuclease-like 22
ThrRS/AlaRS common domain Class II aaRS and biotin synthetases 22
alpha/beta-Hydrolases alpha/beta-Hydrolases 21
DNA clamp DNA clamp 22
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex CoA-dependent acyltransferases 21
Nucleotidyltransferase Poly A polymerase C-terminal region-like 22
Phage fibre proteins Phage fibre proteins 21
P-loop containing nucleoside triphosphate hydrolases C-terminal effector domain of the bipartite response regulators 22
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 21
alpha-helical ferredoxin Nucleotide-binding domain 22
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 22
Translation proteins ThrRS/AlaRS common domain 22
GAF domain-like Nucleotide cyclase 21
Ribonuclease H-like mu transposase, C-terminal domain 21
Enolase N-terminal domain-like Enolase C-terminal domain-like 21
Putative DNA-binding domain Homeodomain-like 21
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 22
Nqo1 FMN-binding domain-like Nqo1C-terminal domain-like 22
MgtE N-terminal domain-like MgtE membrane domain-like 21
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 22
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 22
Penicillin binding protein dimerisation domain beta-lactamase/transpeptidase-like 21
CBS-domain pair MgtE membrane domain-like 21
2Fe-2S ferredoxin-like Formate dehydrogenase/DMSO reductase, domains 1-3 22
Aldolase post-HMGL domain-like 22
NagB/RpiA/CoA transferase-like NagB/RpiA/CoA transferase-like 21
P-loop containing nucleoside triphosphate hydrolases Glucocorticoid receptor-like (DNA-binding domain) 22
Nqo1 FMN-binding domain-like Nqo1 middle domain-like 22
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 21
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases 22
Putative DNA-binding domain Ribonuclease H-like 21
Formyltransferase FMT C-terminal domain-like 22
ACP-like alpha/beta-Hydrolases 21
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 22
Chaperone J-domain HSP40/DnaJ peptide-binding domain 22
"Winged helix" DNA-binding domain S-adenosyl-L-methionine-dependent methyltransferases 22
Cyclophilin-like Cyclophilin-like 22
NAD(P)-binding Rossmann-fold domains ACT-like 22
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 21
P-loop containing nucleoside triphosphate hydrolases Protein kinase-like (PK-like) 22
(Trans)glycosidases Beta-D-glucan exohydrolase, C-terminal domain 22
HMA, heavy metal-associated domain HMA, heavy metal-associated domain 21
Single hybrid motif Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 21
CoA-dependent acyltransferases alpha/beta-Hydrolases 21
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 22
4Fe-4S ferredoxins Formate dehydrogenase/DMSO reductase, domains 1-3 22
Ribosomal protein S5 domain 2-like EF-G C-terminal domain-like 22
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 21
Globin-like Methyl-accepting chemotaxis protein (MCP) signaling domain 21
6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 22
MurCD N-terminal domain MurD-like peptide ligases, catalytic domain 21
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 22
Galactose mutarotase-like Six-hairpin glycosidases 22
CBS-domain pair FAD-binding/transporter-associated domain-like 21
CheY-like HD-domain/PDEase-like 21
Cytochrome c oxidase subunit II-like, transmembrane region Cupredoxins 22
NAD(P)-binding Rossmann-fold domains Tetrapyrrole methylase 21
Homodimeric domain of signal transducing histidine kinase CheW-like 22
NAD(P)-binding Rossmann-fold domains UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 22
Siroheme synthase middle domains-like Tetrapyrrole methylase 21
GroES-like GroES-like 21
Nucleotide-binding domain Nucleotide-binding domain 22
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 21
CheY-like Methylesterase CheB, C-terminal domain 21
NAD(P)-binding Rossmann-fold domains Siroheme synthase middle domains-like 21
P-loop containing nucleoside triphosphate hydrolases ACT-like 21
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 21
Histidine-containing phosphotransfer domain, HPT domain Homodimeric domain of signal transducing histidine kinase 22
GAF domain-like Homeodomain-like 22
HAMP domain-like Nucleotide cyclase 22
Adenine nucleotide alpha hydrolases-like DHS-like NAD/FAD-binding domain 21
Nudix "Winged helix" DNA-binding domain 21
MurCD N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
Putative DNA-binding domain mu transposase, C-terminal domain 21
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 22
FAD/NAD(P)-binding domain HI0933 insert domain-like 21
tRNA-binding arm Class II aaRS and biotin synthetases 21
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 22
Thioesterase/thiol ester dehydrase-isomerase Thioesterase/thiol ester dehydrase-isomerase 22
MetI-like P-loop containing nucleoside triphosphate hydrolases 21
Single hybrid motif CoA-dependent acyltransferases 21
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 21
Nucleotidyltransferase ACT-like 22
Nqo1 middle domain-like Nqo1C-terminal domain-like 22
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 22
Adenine nucleotide alpha hydrolases-like Adenine nucleotide alpha hydrolases-like 21
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
S-adenosyl-L-methionine-dependent methyltransferases P-loop containing nucleoside triphosphate hydrolases 21
Acetyl-CoA synthetase-like alpha/beta-Hydrolases 21
ClpP/crotonase ClpP/crotonase 21
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 22
HAMP domain-like PYP-like sensor domain (PAS domain) 22
Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), C-terminal domain 21
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 22
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 21
Aspartate/glutamate racemase Aspartate/glutamate racemase 21
Histidine-containing phosphotransfer domain, HPT domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 22
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
GAF domain-like EAL domain-like 21
Nucleic acid-binding proteins Translation proteins SH3-like domain 22
Homeodomain-like mu transposase, C-terminal domain 21
DnaK suppressor protein DksA, alpha-hairpin domain Glucocorticoid receptor-like (DNA-binding domain) 21
Sm-like ribonucleoproteins Mechanosensitive channel protein MscS (YggB), C-terminal domain 21
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 22
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of B transposition protein 21
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheW-like 22
Metallo-dependent phosphatases 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain 22
2Fe-2S ferredoxin-like 4Fe-4S ferredoxins 22
MgtE N-terminal domain-like CBS-domain pair 21
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
Fibronectin type III Cadherin-like 11
TrkA C-terminal domain-like TrkA C-terminal domain-like 11
CBS-domain pair Nucleotide cyclase 11
DNA-glycosylase Nudix 11
PHP14-like Phospholipase D/nuclease 11
CoA-dependent acyltransferases S-adenosyl-L-methionine-dependent methyltransferases 11
Thioredoxin-like Nqo1 middle domain-like 11
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 11
CheY-like Nucleotide cyclase 11
ADC synthase Class I glutamine amidotransferase-like 11
TolB, N-terminal domain Tricorn protease N-terminal domain 11
Arabinanase/levansucrase/invertase Concanavalin A-like lectins/glucanases 11
Adenine nucleotide alpha hydrolases-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
PIN domain-like DNA/RNA polymerases 11
Prokaryotic type I DNA topoisomerase Zinc beta-ribbon 11
Transcription factor NusA, N-terminal domain Prokaryotic type KH domain (KH-domain type II) 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 11
Single hybrid motif Thiamin diphosphate-binding fold (THDP-binding) 11
ClpP/crotonase NAD(P)-binding Rossmann-fold domains 11
FAD/NAD(P)-binding domain Thioredoxin-like 11
FAD-binding/transporter-associated domain-like CO dehydrogenase molybdoprotein N-domain-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FMN-linked oxidoreductases 11
ACP-like S-adenosyl-L-methionine-dependent methyltransferases 11
2Fe-2S ferredoxin-like alpha-helical ferredoxin 11
CO dehydrogenase flavoprotein C-terminal domain-like CO dehydrogenase molybdoprotein N-domain-like 11
Putative DNA-binding domain lambda repressor-like DNA-binding domains 11
Translation proteins Translation proteins 11
GAF domain-like Phosphohistidine domain 11
Nucleic acid-binding proteins GAD domain-like 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
FAD/NAD(P)-binding domain Nitrite/Sulfite reductase N-terminal domain-like 11
Ribonuclease H-like DNA/RNA polymerases 11
beta-Galactosidase/glucuronidase domain Galactose mutarotase-like 11
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases CarD-like 11
FabD/lysophospholipase-like Thioesterase/thiol ester dehydrase-isomerase 11
Zinc beta-ribbon DNA primase core 11
Histidine-containing phosphotransfer domain, HPT domain CheW-like 11
Nucleic acid-binding proteins PheT/TilS domain 11
GAF domain-like Phosphoenolpyruvate/pyruvate domain 11
RBP11-like subunits of RNA polymerase C-terminal domain of RNA polymerase alpha subunit 11
FMT C-terminal domain-like CoA-dependent acyltransferases 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
Tex N-terminal region-like RuvA domain 2-like 11
HAMP domain-like EAL domain-like 11
FMN-binding split barrel UbiD C-terminal domain-like 11
YrdC/RibB RibA-like 11
Glutathione synthetase ATP-binding domain-like Cyclophilin-like 11
NTF2-like FAD/NAD(P)-binding domain 11
"Winged helix" DNA-binding domain Phospholipase D/nuclease 11
Ribonuclease H-like HRDC-like 11
N-terminal domain of DnaB helicase P-loop containing nucleoside triphosphate hydrolases 11
PEP carboxykinase N-terminal domain PEP carboxykinase-like 11
N-terminal domain of bifunctional PutA protein FAD-linked oxidoreductase 11
post-HMGL domain-like 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 11
Formyltransferase CoA-dependent acyltransferases 11
Riboflavin synthase domain-like 2Fe-2S ferredoxin-like 11
Chemotaxis phosphatase CheZ Methyl-accepting chemotaxis protein (MCP) signaling domain 11
beta-N-acetylhexosaminidase-like domain (Trans)glycosidases 11
YhbC-like, N-terminal domain YhbC-like, C-terminal domain 11
Homocysteine S-methyltransferase Methionine synthase domain 11
Ribonuclease H-like FAD/NAD(P)-binding domain 11
Calcium ATPase, transduction domain A Metal cation-transporting ATPase, ATP-binding domain N 11
Single hybrid motif TK C-terminal domain-like 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Homeodomain-like NagB/RpiA/CoA transferase-like 11
Cobalamin (vitamin B12)-binding domain Methionine synthase activation domain-like 11
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 11
ABC transporter involved in vitamin B12 uptake, BtuC ABC transporter involved in vitamin B12 uptake, BtuC 11
(Trans)glycosidases (Trans)glycosidases 11
Cryptochrome/photolyase, N-terminal domain Cryptochrome/photolyase FAD-binding domain 11
Poly A polymerase C-terminal region-like ACT-like 11
Glutathione synthetase ATP-binding domain-like Succinyl-CoA synthetase domains 11
Prokaryotic type KH domain (KH-domain type II) Rad51 N-terminal domain-like 11
Rudiment single hybrid motif PH0987 N-terminal domain-like 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
Putative DNA-binding domain Anticodon-binding domain of PheRS 11
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
TGS-like Class II aaRS ABD-related 11
Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Pyrimidine nucleoside phosphorylase C-terminal domain 11
Protein kinase-like (PK-like) Adenine nucleotide alpha hydrolases-like 11
Actin-like ATPase domain Acyl-CoA N-acyltransferases (Nat) 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 11
CobE/GbiG C-terminal domain-like Tetrapyrrole methylase 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
MOSC N-terminal domain-like PK beta-barrel domain-like 11
Bacterial muramidases Lysozyme-like 11
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 11
Thioredoxin-like Nqo1 FMN-binding domain-like 11
Ribosomal protein S5 domain 2-like HSP90 C-terminal domain 11
Transcription factor NusA, N-terminal domain Rad51 N-terminal domain-like 11
MFS general substrate transporter MFS general substrate transporter 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 11
CoA-dependent acyltransferases NAD(P)-binding Rossmann-fold domains 11
Integrin alpha N-terminal domain Integrin alpha N-terminal domain 11
Rho N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
GIY-YIG endonuclease C-terminal UvrC-binding domain of UvrB 11
Pectin lyase-like Autotransporter 11
ClpP/crotonase 6-phosphogluconate dehydrogenase C-terminal domain-like 11
Sensory domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Nucleotidyltransferase TGS-like 11
Putative DNA-binding domain C-terminal effector domain of the bipartite response regulators 11
Sensory domain-like Homodimeric domain of signal transducing histidine kinase 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 11
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 11
Ribonuclease H-like RuvA domain 2-like 11
Fumarate reductase respiratory complex transmembrane subunits 2Fe-2S ferredoxin-like 11
Nucleotide-diphospho-sugar transferases RmlC-like cupins 11
Glutathione synthetase ATP-binding domain-like Phosphoenolpyruvate/pyruvate domain 11
TerB-like Chaperone J-domain 11
Translation proteins Ribosomal protein S5 domain 2-like 11
Nucleic acid-binding proteins DNA helicase RuvA subunit, C-terminal domain 11
Carbamate kinase-like PUA domain-like 11
Nucleic acid-binding proteins Anticodon-binding domain of PheRS 11
CbiG N-terminal domain-like CobE/GbiG C-terminal domain-like 11
HD-domain/PDEase-like ACT-like 11
Class I glutamine amidotransferase-like Glycosyl hydrolase domain 11
NagB/RpiA/CoA transferase-like D-ribose-5-phosphate isomerase (RpiA), lid domain 11
5' to 3' exonuclease, C-terminal subdomain Ribonuclease H-like 11
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 11
Formyltransferase ACP-like 11
Aminoacid dehydrogenase-like, N-terminal domain Isocitrate/Isopropylmalate dehydrogenase-like 11
Formate/glycerate dehydrogenase catalytic domain-like Serine metabolism enzymes domain 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
Formyltransferase S-adenosyl-L-methionine-dependent methyltransferases 11
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 11
Sigma3 and sigma4 domains of RNA polymerase sigma factors CheY-like 11
PIN domain-like Ribonuclease H-like 11
Glutaminase/Asparaginase alpha-D-mannose-specific plant lectins 11
Nucleotidyltransferase substrate binding subunit/domain Nucleotidyltransferase substrate binding subunit/domain 11
Beta-D-glucan exohydrolase, C-terminal domain Anthrax protective antigen 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Alpha subunit of glutamate synthase, C-terminal domain 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphoenolpyruvate/pyruvate domain 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 11
Translation proteins PRC-barrel domain 11
Xylose isomerase-like Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 11
R1 subunit of ribonucleotide reductase, N-terminal domain PFL-like glycyl radical enzymes 11
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 11
Leukotriene A4 hydrolase N-terminal domain Metalloproteases ("zincins"), catalytic domain 11
P-loop containing nucleoside triphosphate hydrolases TrpR-like 11
5' to 3' exonuclease, C-terminal subdomain DNA/RNA polymerases 11
Rhodanese/Cell cycle control phosphatase Rhodanese/Cell cycle control phosphatase 11
GAF domain-like Homodimeric domain of signal transducing histidine kinase 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
Glutathione synthetase ATP-binding domain-like PH0987 N-terminal domain-like 11
Homocysteine S-methyltransferase Methionine synthase activation domain-like 11
Cyclophilin-like Single hybrid motif 11
TGS-like Class II aaRS and biotin synthetases 11
FMN-linked oxidoreductases 4Fe-4S ferredoxins 11
PPK N-terminal domain-like Phospholipase D/nuclease 11
2Fe-2S ferredoxin-like ADC-like 11
Macro domain-like Zn-dependent exopeptidases 11
Alpha-L RNA-binding motif S-adenosyl-L-methionine-dependent methyltransferases 11
CheY-like Histidine-containing phosphotransfer domain, HPT domain 11
MoeA N-terminal region -like Molybdenum cofactor biosynthesis proteins 11
Class II aaRS and biotin synthetases GAD domain-like 11
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases Smc hinge domain 11
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 11
Rudiment single hybrid motif Aldolase 11
Class II aaRS and biotin synthetases Translation proteins 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain ACT-like 11
Putative DNA-binding domain RmlC-like cupins 11
Ribonuclease H-like Nucleic acid-binding proteins 11
DNA topoisomerase I domain DNA breaking-rejoining enzymes 11
GAF domain-like P-loop containing nucleoside triphosphate hydrolases 11
Resolvase-like Homeodomain-like 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
DNA ligase/mRNA capping enzyme, catalytic domain RuvA domain 2-like 11
dUTPase-like dUTPase-like 11
Cytidine deaminase-like Dihydrofolate reductase-like 11
Glutathione synthetase ATP-binding domain-like Aldolase 11
GIY-YIG endonuclease RuvA domain 2-like 11
YjeF N-terminal domain-like Ribokinase-like 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
FabD/lysophospholipase-like GroES-like 11
P-loop containing nucleoside triphosphate hydrolases C-terminal UvrC-binding domain of UvrB 11
Heme-dependent peroxidases Heme-dependent peroxidases 11
Nucleic acid-binding proteins Prokaryotic type KH domain (KH-domain type II) 11
Radical SAM enzymes RuvA domain 2-like 11
AraD/HMP-PK domain-like NAD(P)-binding Rossmann-fold domains 11
FAD-binding/transporter-associated domain-like Molybdenum cofactor-binding domain 11
Homeodomain-like Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 11
Transmembrane di-heme cytochromes YceI-like 11
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 11
Formate/glycerate dehydrogenase catalytic domain-like ACT-like 11
Nitrite and sulphite reductase 4Fe-4S domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) Methylated DNA-protein cysteine methyltransferase domain 11
PPK N-terminal domain-like PHP14-like 11
post-HMGL domain-like Single hybrid motif 11
FAD-linked reductases, C-terminal domain Aminomethyltransferase beta-barrel domain 11
Homocysteine S-methyltransferase Cobalamin (vitamin B12)-binding domain 11
2Fe-2S ferredoxin-like CO dehydrogenase flavoprotein C-terminal domain-like 11
Nucleotide-diphospho-sugar transferases PilZ domain-like 11
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
CO dehydrogenase ISP C-domain like FAD-binding/transporter-associated domain-like 11
Rhodanese/Cell cycle control phosphatase Acyl-CoA N-acyltransferases (Nat) 11
P-loop containing nucleoside triphosphate hydrolases HRDC-like 11
FMT C-terminal domain-like Acetyl-CoA synthetase-like 11
Hypothetical protein SAV1430 Fe-S cluster assembly (FSCA) domain-like 11
4'-phosphopantetheinyl transferase 4'-phosphopantetheinyl transferase 11
GroEL equatorial domain-like GroEL-intermediate domain like 11
HCP-like HCP-like 11
Actin-like ATPase domain P-loop containing nucleoside triphosphate hydrolases 11
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 11
Putative DNA-binding domain Cobalamin (vitamin B12)-binding domain 11
PUA domain-like Ribosomal protein S5 domain 2-like 11
alpha-helical ferredoxin ARM repeat 11
DeoB insert domain-like Alkaline phosphatase-like 11
FAD-linked reductases, C-terminal domain 4Fe-4S ferredoxins 11
Riboflavin synthase domain-like Riboflavin synthase domain-like 11
Thiolase-like Thioesterase/thiol ester dehydrase-isomerase 11
Acetyl-CoA synthetase-like NAD(P)-binding Rossmann-fold domains 11
2Fe-2S ferredoxin-like Nucleotide cyclase 11
Heme-dependent catalase-like Class I glutamine amidotransferase-like 11
RuvA domain 2-like DNA helicase RuvA subunit, C-terminal domain 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
"Winged helix" DNA-binding domain Iron-dependent repressor protein, dimerization domain 11
Periplasmic binding protein-like II Periplasmic binding protein-like II 11
PreATP-grasp domain Cyclophilin-like 11
PheT/TilS domain Anticodon-binding domain of PheRS 11
P-loop containing nucleoside triphosphate hydrolases TGS-like 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) Homeodomain-like 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
Adenine nucleotide alpha hydrolases-like Homodimeric domain of signal transducing histidine kinase 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase HSP90 C-terminal domain 11
Galactose mutarotase-like Galactose mutarotase-like 11
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 11
FAD-binding/transporter-associated domain-like Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain 11
Protein kinase-like (PK-like) PLP-dependent transferases 11
PDZ domain-like ClpP/crotonase 11
"Winged helix" DNA-binding domain Periplasmic binding protein-like I 11
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 11
Periplasmic binding protein-like II ACT-like 11
TGS-like ThrRS/AlaRS common domain 11
GAF domain-like Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 11
GAF domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
GroEL equatorial domain-like GroEL apical domain-like 11
Cadherin-like Cadherin-like 11
5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain LysM domain 11
PreATP-grasp domain post-HMGL domain-like 11
PheT/TilS domain Class II aaRS and biotin synthetases 11
Transcription factor NusA, N-terminal domain Nucleic acid-binding proteins 11
UDP-Glycosyltransferase/glycogen phosphorylase UDP-Glycosyltransferase/glycogen phosphorylase 11
Metallo-dependent phosphatases LysM domain 11
Nitrite/Sulfite reductase N-terminal domain-like Nitrite/Sulfite reductase N-terminal domain-like 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
GroES-like ACP-like 11
(Trans)glycosidases Anthrax protective antigen 11
Methylglyoxal synthase-like Cytidine deaminase-like 11
NAD(P)-binding Rossmann-fold domains Isocitrate/Isopropylmalate dehydrogenase-like 11
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 11
PLP-dependent transferases PLP-dependent transferases 11
Nucleotidylyl transferase Riboflavin kinase-like 11
(Trans)glycosidases Galactose mutarotase-like 11
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Pyrimidine nucleoside phosphorylase C-terminal domain 11
S13-like H2TH domain Glucocorticoid receptor-like (DNA-binding domain) 11
C-terminal UvrC-binding domain of UvrB RuvA domain 2-like 11
FMT C-terminal domain-like ACP-like 11
2Fe-2S ferredoxin-like FAD-binding/transporter-associated domain-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 11
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 11
Thioredoxin-like TPR-like 11
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
Nucleotidyltransferase substrate binding subunit/domain Poly A polymerase C-terminal region-like 11
Homeodomain-like Methylated DNA-protein cysteine methyltransferase domain 11
Sigma3 and sigma4 domains of RNA polymerase sigma factors NagB/RpiA/CoA transferase-like 11
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 11
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 11
Nucleotidyltransferase substrate binding subunit/domain ACT-like 11
RuvA domain 2-like BRCT domain 11
Dihydropteroate synthetase-like Methionine synthase domain 11
Glutamine synthetase/guanido kinase GatB/YqeY motif 11
FAD/NAD(P)-binding domain 4Fe-4S ferredoxins 11
Metal cation-transporting ATPase, ATP-binding domain N HAD-like 11
Trigger factor ribosome-binding domain FKBP-like 11
Fumarate reductase respiratory complex transmembrane subunits Nucleotide cyclase 11
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 11
Ribosomal protein L6 Ribosomal protein L6 11
LysM domain LysM domain 11
Nucleic acid-binding proteins ArfGap/RecO-like zinc finger 11
FMT C-terminal domain-like S-adenosyl-L-methionine-dependent methyltransferases 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 11
Formyltransferase Acetyl-CoA synthetase-like 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
Glycosyl hydrolase domain Protein kinase-like (PK-like) 11
4Fe-4S ferredoxins ADC-like 11
CO dehydrogenase flavoprotein C-terminal domain-like Molybdenum cofactor-binding domain 11
Serine metabolism enzymes domain ACT-like 11
Fibronectin type III Fibronectin type III 11
Galactose-binding domain-like Galactose mutarotase-like 11
Methionine synthase domain Methionine synthase activation domain-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 11
FAD-linked oxidoreductase ALDH-like 11
Aconitase iron-sulfur domain LeuD/IlvD-like 11
CarD-like TRCF domain-like 11
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 11
Transmembrane di-heme cytochromes a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 11
TPR-like Nucleotide cyclase 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
FliG FliG 11
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 11
Fibronectin type III Autotransporter 11
HCP-like PGBD-like 11
UDP-Glycosyltransferase/glycogen phosphorylase Six-hairpin glycosidases 11
PreATP-grasp domain PH0987 N-terminal domain-like 11
TGS-like ACT-like 11
FAD/NAD(P)-binding domain Nitrite and sulphite reductase 4Fe-4S domain-like 11
PreATP-grasp domain Methylglyoxal synthase-like 11
Translation proteins Initiation factor IF2/eIF5b, domain 3 11
beta-Roll Concanavalin A-like lectins/glucanases 11
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 11
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 11
Tex N-terminal region-like Ribonuclease H-like 11
LysM domain Duplicated hybrid motif 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
E set domains E set domains 11
Rudiment single hybrid motif Cyclophilin-like 11
Putative DNA-binding domain P-loop containing nucleoside triphosphate hydrolases 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
Prokaryotic type KH domain (KH-domain type II) Prokaryotic type KH domain (KH-domain type II) 11
Tryptophan synthase beta subunit-like PLP-dependent enzymes ACT-like 11
Fe-S cluster assembly (FSCA) domain-like P-loop containing nucleoside triphosphate hydrolases 11
N-acetylmuramoyl-L-alanine amidase-like PGBD-like 11
Peptidase/esterase 'gauge' domain alpha/beta-Hydrolases 11
Apolipoprotein A-I Apolipoprotein A-I 11
Molybdenum cofactor biosynthesis proteins MoeA C-terminal domain-like 11
ACT-like Formyltransferase 11
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 11
GreA transcript cleavage protein, N-terminal domain FKBP-like 11
NAD(P)-binding Rossmann-fold domains Serine metabolism enzymes domain 11
(Trans)glycosidases Class I glutamine amidotransferase-like 11
Hairpin loop containing domain-like Terpenoid cyclases/Protein prenyltransferases 11
Ferredoxin reductase-like, C-terminal NADP-linked domain 2Fe-2S ferredoxin-like 11
Ribbon-helix-helix ACT-like 11
Trimeric LpxA-like enzymes S-adenosyl-L-methionine-dependent methyltransferases 11
Carbamate kinase-like ACT-like 11
Nucleic acid-binding proteins Putative DNA-binding domain 11
Nucleic acid-binding proteins S-adenosyl-L-methionine-dependent methyltransferases 11
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 11
TrmE connector domain P-loop containing nucleoside triphosphate hydrolases 11
PreATP-grasp domain Aldolase 11
Cobalamin (vitamin B12)-dependent enzymes Cobalamin (vitamin B12)-binding domain 11
Aldolase Single hybrid motif 11
PGBD-like PGBD-like 11
Thiolase-like GroES-like 11
Eukaryotic type KH-domain (KH-domain type I) Nucleic acid-binding proteins 11
all-alpha NTP pyrophosphatases all-alpha NTP pyrophosphatases 11
beta-lactamase/transpeptidase-like Sporulation related repeat 11
Cadherin-like Autotransporter 11
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 11
"Winged helix" DNA-binding domain LexA/Signal peptidase 11
Homo-oligomeric flavin-containing Cys decarboxylases, HFCD CoaB-like 11
PH0987 N-terminal domain-like Single hybrid motif 11
EAL domain-like CBS-domain pair 11
Glutathione synthetase ATP-binding domain-like post-HMGL domain-like 11
GroEL-intermediate domain like GroEL apical domain-like 11
Homocysteine S-methyltransferase Dihydropteroate synthetase-like 11
CbiG N-terminal domain-like Tetrapyrrole methylase 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 11
Thioredoxin-like Nqo1C-terminal domain-like 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 11
Probable ACP-binding domain of malonyl-CoA ACP transacylase GroES-like 11
Tex N-terminal region-like Nucleic acid-binding proteins 11
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 11
Tetrapyrrole methylase S-adenosyl-L-methionine-dependent methyltransferases 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
Nucleic acid-binding proteins BRCT domain 11
Clc chloride channel CBS-domain pair 11
PreATP-grasp domain PreATP-grasp domain 11
HlyD-like secretion proteins HlyD-like secretion proteins 11
L9 N-domain-like Ribosomal protein L9 C-domain 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
FAD-linked reductases, C-terminal domain Folate-binding domain 11
YebC-like PFL-like glycyl radical enzymes 11
Nucleotidyltransferase Nucleotidyltransferase 11
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 11
FMN-linked oxidoreductases Alpha subunit of glutamate synthase, C-terminal domain 11
HD-domain/PDEase-like TGS-like 11
Acid phosphatase/Vanadium-dependent haloperoxidase Pectin lyase-like 11
Methionine synthase domain Cobalamin (vitamin B12)-binding domain 11
"Winged helix" DNA-binding domain Acyl-CoA N-acyltransferases (Nat) 11
YlxR-like L30e-like 11
Acetyl-CoA synthetase-like S-adenosyl-L-methionine-dependent methyltransferases 11
HRDC-like HRDC-like 11
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
N-terminal domain of bifunctional PutA protein ALDH-like 11
N-terminal domain of MutM-like DNA repair proteins Glucocorticoid receptor-like (DNA-binding domain) 11
TPR-like S-adenosyl-L-methionine-dependent methyltransferases 11
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 11
Dihydropteroate synthetase-like Methionine synthase activation domain-like 11
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 11
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 11
CO dehydrogenase ISP C-domain like CO dehydrogenase flavoprotein C-terminal domain-like 11
PUA domain-like alpha/beta knot 11
HD-domain/PDEase-like Nucleotidyltransferase 11
(Phosphotyrosine protein) phosphatases II Metallo-hydrolase/oxidoreductase 11
beta-lactamase/transpeptidase-like Penicillin-binding protein associated domain 11
RNase III domain-like dsRNA-binding domain-like 11
MoeA N-terminal region -like MoeA C-terminal domain-like 11
Metal cation-transporting ATPase, ATP-binding domain N Calcium ATPase, transmembrane domain M 11
Urease metallochaperone UreE, N-terminal domain Urease metallochaperone UreE, C-terminal domain 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
Dihydropteroate synthetase-like Cobalamin (vitamin B12)-binding domain 11
ISP domain Bet v1-like 11
(Trans)glycosidases Protein kinase-like (PK-like) 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphohistidine domain 11
RuvA domain 2-like RuvA domain 2-like 11
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 11
Actin-like ATPase domain HD-domain/PDEase-like 11
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 11
PheT/TilS domain Putative DNA-binding domain 11
AGR C 984p-like AGR C 984p-like 11
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 11
Nucleic acid-binding proteins Rad51 N-terminal domain-like 11
Diaminopimelate epimerase-like Diaminopimelate epimerase-like 11
RuvA domain 2-like JAB1/MPN domain 11
P-loop containing nucleoside triphosphate hydrolases CBS-domain pair 11
Hsp33 domain HSP33 redox switch-like 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 11
Nucleotidylyl transferase tRNA-binding arm 11
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 11
Rudiment single hybrid motif post-HMGL domain-like 11
Nucleotide-diphospho-sugar transferases IpsF-like 11
alpha/beta-Hydrolases Galactose-binding domain-like 11
Carbon-nitrogen hydrolase Adenine nucleotide alpha hydrolases-like 11
PLP-dependent transferases Ornithine decarboxylase C-terminal domain 11
Rho N-terminal domain-like Nucleic acid-binding proteins 11

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