SUPERFAMILY 1.75 HMM library and genome assignments server

Domain combination pairs in Thauera sp. MZ1T

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

  • For a list of unique full length architectures for this genome click here (can be slow).
Adjacent domain pairs graph

Graph of adjacent domain pairs.


Add or remove domain pairs

The links below permit the addition or removal of specific sets of domain combination pairs.


Jump to [ Top of page · Add/remove domain pairs · Domain combination pairs ]

Add or remove genomes

Change the list of genome two-letter codes in the 'Include genomes' box to include domain-pairs from those genomes.
Change the list of genomes in the 'Exclude genomes' box to exclude domain-pairs from those genomes.
List of all two-letter genome codes.

Add or remove genomes:
Include genomes:
Exclude genomes:


Jump to [ Top of page · Add/remove domain pairs · Add/remove genomes ]

Domain combination pairs

729 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 4622
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 3316
"Winged helix" DNA-binding domain Periplasmic binding protein-like II 311
CheY-like C-terminal effector domain of the bipartite response regulators 262
PYP-like sensor domain (PAS domain) Nucleotide cyclase 2216
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 2115
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 1913
Nucleotide cyclase EAL domain-like 1915
PYP-like sensor domain (PAS domain) PYP-like sensor domain (PAS domain) 1514
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 155
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 157
PYP-like sensor domain (PAS domain) EAL domain-like 1511
Actin-like ATPase domain Actin-like ATPase domain 144
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 135
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheY-like 1313
Formate dehydrogenase/DMSO reductase, domains 1-3 ADC-like 135
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 124
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB transmembrane domain 124
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 127
PYP-like sensor domain (PAS domain) CheY-like 1211
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB transmembrane domain 124
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 124
GroES-like NAD(P)-binding Rossmann-fold domains 112
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 113
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 113
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 115
CheY-like P-loop containing nucleoside triphosphate hydrolases 113
Homodimeric domain of signal transducing histidine kinase CheY-like 1111
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 114
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Histidine-containing phosphotransfer domain, HPT domain 109
CheY-like Homeodomain-like 102
P-loop containing nucleoside triphosphate hydrolases Translation proteins 106
HAMP domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 106
CheY-like Nucleotide cyclase 97
Homodimeric domain of signal transducing histidine kinase Histidine-containing phosphotransfer domain, HPT domain 98
Thioredoxin-like GST C-terminal domain-like 91
Homeodomain-like Tetracyclin repressor-like, C-terminal domain 82
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 83
CheY-like Histidine-containing phosphotransfer domain, HPT domain 88
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 84
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 82
cAMP-binding domain-like "Winged helix" DNA-binding domain 82
Thiolase-like Thiolase-like 82
HAMP domain-like Homodimeric domain of signal transducing histidine kinase 84
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 83
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 85
HAD-like Calcium ATPase, transmembrane domain M 75
Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase C-terminal domain-like 72
Calcium ATPase, transduction domain A HAD-like 75
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 75
Cytochrome c Cytochrome c 64
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 65
CheY-like EAL domain-like 65
"Winged helix" DNA-binding domain Dimeric alpha+beta barrel 61
GAF domain-like PYP-like sensor domain (PAS domain) 66
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 64
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 64
"Winged helix" DNA-binding domain GAF domain-like 61
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein S5 domain 2-like 65
ACT-like ACT-like 64
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 63
GAF domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 66
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 63
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 54
Alpha-L RNA-binding motif Pseudouridine synthase 52
Translation proteins EF-G C-terminal domain-like 53
PYP-like sensor domain (PAS domain) Histidine-containing phosphotransfer domain, HPT domain 55
Composite domain of metallo-dependent hydrolases Metallo-dependent hydrolases 54
2Fe-2S ferredoxin-like Ferredoxin reductase-like, C-terminal NADP-linked domain 52
P-loop containing nucleoside triphosphate hydrolases MOP-like 51
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 53
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 51
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 52
Succinyl-CoA synthetase domains Glutathione synthetase ATP-binding domain-like 53
PreATP-grasp domain Rudiment single hybrid motif 52
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 51
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 54
2Fe-2S ferredoxin-like Riboflavin synthase domain-like 52
PurM N-terminal domain-like PurM C-terminal domain-like 52
Succinyl-CoA synthetase domains Succinyl-CoA synthetase domains 53
CBS-domain pair FAD-binding/transporter-associated domain-like 51
HMA, heavy metal-associated domain HAD-like 43
ClpP/crotonase ClpP/crotonase 43
Resolvase-like Homeodomain-like 41
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 43
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 42
HD-domain/PDEase-like CheY-like 42
NAD(P)-binding Rossmann-fold domains TrkA C-terminal domain-like 44
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 42
GAF domain-like Homodimeric domain of signal transducing histidine kinase 44
"Winged helix" DNA-binding domain GntR ligand-binding domain-like 41
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 43
FKBP-like Triger factor/SurA peptide-binding domain-like 44
GAF domain-like P-loop containing nucleoside triphosphate hydrolases 44
GAF domain-like CheY-like 44
Single hybrid motif CoA-dependent acyltransferases 42
EspE N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 43
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex CoA-dependent acyltransferases 42
"Winged helix" DNA-binding domain PLP-dependent transferases 41
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 44
EF-G C-terminal domain-like EF-G C-terminal domain-like 42
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 41
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 42
NAD(P)-binding Rossmann-fold domains Glutathione synthetase ATP-binding domain-like 42
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 41
Single hybrid motif Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 42
HAMP domain-like Nucleotide cyclase 43
2Fe-2S ferredoxin-like 4Fe-4S ferredoxins 33
Pyruvate-ferredoxin oxidoreductase, PFOR, domain III Thiamin diphosphate-binding fold (THDP-binding) 33
DNA methylase specificity domain DNA methylase specificity domain 32
GAF domain-like Nucleotide cyclase 33
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheW-like 32
MurCD N-terminal domain MurD-like peptide ligases, peptide-binding domain 31
Class II aaRS and biotin synthetases Class II aaRS ABD-related 33
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 32
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 33
Glutathione synthetase ATP-binding domain-like Acyl-CoA N-acyltransferases (Nat) 31
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 32
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 32
Aldolase post-HMGL domain-like 32
Homeodomain-like Ribonuclease H-like 31
HD-domain/PDEase-like ACT-like 32
Trypsin-like serine proteases PDZ domain-like 32
Nqo1 FMN-binding domain-like Nqo1C-terminal domain-like 33
6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 31
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 32
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 32
Nucleotidyltransferase HD-domain/PDEase-like 32
GAF domain-like GAF domain-like 33
(Trans)glycosidases Glycosyl hydrolase domain 33
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 32
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 32
E set domains E set domains 32
lambda integrase-like, N-terminal domain DNA breaking-rejoining enzymes 31
HAMP domain-like PYP-like sensor domain (PAS domain) 32
EF-G C-terminal domain-like Ribosomal protein S5 domain 2-like 32
Sm-like ribonucleoproteins Mechanosensitive channel protein MscS (YggB), C-terminal domain 32
NAD(P)-binding Rossmann-fold domains Acyl-CoA N-acyltransferases (Nat) 31
Succinyl-CoA synthetase domains Acyl-CoA N-acyltransferases (Nat) 31
Nucleotidyltransferase ACT-like 32
Cryptochrome/photolyase, N-terminal domain Cryptochrome/photolyase FAD-binding domain 33
2Fe-2S ferredoxin-like alpha-helical ferredoxin 31
Nucleic acid-binding proteins RuvA domain 2-like 33
HlyD-like secretion proteins HlyD-like secretion proteins 32
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 32
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Adenine nucleotide alpha hydrolases-like 31
6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 33
CheW-like CheY-like 32
PLP-binding barrel Alanine racemase C-terminal domain-like 32
PDZ domain-like PDZ domain-like 32
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 33
MurCD N-terminal domain MurD-like peptide ligases, catalytic domain 31
Nqo1 FMN-binding domain-like Nqo1 middle domain-like 33
TrkA C-terminal domain-like TrkA C-terminal domain-like 32
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 32
NagB/RpiA/CoA transferase-like NagB/RpiA/CoA transferase-like 32
P-loop containing nucleoside triphosphate hydrolases Restriction endonuclease-like 33
NAD(P)-binding Rossmann-fold domains UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 31
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 32
NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains 33
Nqo1 middle domain-like Nqo1C-terminal domain-like 33
Histidine-containing phosphotransfer domain, HPT domain CheW-like 32
GAF domain-like EAL domain-like 33
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 32
Nucleic acid-binding proteins Nucleic acid-binding proteins 33
Thioredoxin-like Nqo1 middle domain-like 22
CO dehydrogenase molybdoprotein N-domain-like Molybdenum cofactor-binding domain 22
Nucleic acid-binding proteins Translation proteins SH3-like domain 22
Cobalamin (vitamin B12)-dependent enzymes Cobalamin (vitamin B12)-binding domain 22
Nqo1 FMN-binding domain-like alpha-helical ferredoxin 22
Lysozyme-like PGBD-like 22
CheY-like CheY-like 22
FMN-linked oxidoreductases FAD/NAD(P)-binding domain 22
HD-domain/PDEase-like TGS-like 21
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 21
2Fe-2S ferredoxin-like CO dehydrogenase ISP C-domain like 22
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 22
Cytochrome c Quinohemoprotein amine dehydrogenase A chain, domain 3 21
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 21
TPR-like TPR-like 22
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 21
Calcium ATPase, transduction domain A Metal cation-transporting ATPase, ATP-binding domain N 21
ClpP/crotonase 6-phosphogluconate dehydrogenase C-terminal domain-like 22
Class II aaRS and biotin synthetases ThrRS/AlaRS common domain 22
GroEL equatorial domain-like GroEL apical domain-like 22
Nucleotidyltransferase TGS-like 21
Molybdenum cofactor biosynthesis proteins MoeA C-terminal domain-like 21
MoeA N-terminal region -like MoeA C-terminal domain-like 21
ClpP/crotonase NAD(P)-binding Rossmann-fold domains 22
MoeA N-terminal region -like Molybdenum cofactor biosynthesis proteins 21
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 21
PreATP-grasp domain Single hybrid motif 21
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 22
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 22
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 22
HD-domain/PDEase-like Nucleotide cyclase 21
4Fe-4S ferredoxins Formate dehydrogenase/DMSO reductase, domains 1-3 22
Translation proteins Ribosomal protein S5 domain 2-like 21
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 22
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 22
2Fe-2S ferredoxin-like Formate dehydrogenase/DMSO reductase, domains 1-3 22
Nucleotide cyclase SMAD/FHA domain 21
Methylated DNA-protein cysteine methyltransferase domain Methylated DNA-protein cysteine methyltransferase, C-terminal domain 22
Multiheme cytochromes ARM repeat 21
Quinohemoprotein amine dehydrogenase A chain, domain 3 E set domains 21
Nucleotidyltransferase Poly A polymerase C-terminal region-like 22
Rhodanese/Cell cycle control phosphatase Rhodanese/Cell cycle control phosphatase 22
Homodimeric domain of signal transducing histidine kinase CheW-like 21
4Fe-4S ferredoxins 4Fe-4S ferredoxins 22
Pyruvate-ferredoxin oxidoreductase, PFOR, domain III TK C-terminal domain-like 22
Sensory domain-like HAMP domain-like 22
ISP domain Bet v1-like 21
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 22
Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 22
Aspartate/glutamate racemase Aspartate/glutamate racemase 21
Ribonuclease H-like GIY-YIG endonuclease 21
Folate-binding domain Aminomethyltransferase beta-barrel domain 21
TGS-like ACT-like 21
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 21
Aconitase iron-sulfur domain LeuD/IlvD-like 22
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 21
L30e-like alpha/beta knot 21
Multiheme cytochromes TPR-like 21
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 22
ARM repeat TPR-like 21
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 22
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 21
Lysozyme-like beta-lactamase/transpeptidase-like 22
GroEL equatorial domain-like GroEL-intermediate domain like 22
Glutathione synthetase ATP-binding domain-like Single hybrid motif 21
2Fe-2S ferredoxin-like ADC-like 22
E set domains Glycosyl hydrolase domain 22
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 22
NAD(P)-binding Rossmann-fold domains Isocitrate/Isopropylmalate dehydrogenase-like 21
Penicillin binding protein dimerisation domain beta-lactamase/transpeptidase-like 22
tRNA-binding arm Class II aaRS and biotin synthetases 21
Cytochrome c E set domains 21
Phospholipase D/nuclease Phospholipase D/nuclease 22
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
PYP-like sensor domain (PAS domain) P-loop containing nucleoside triphosphate hydrolases 22
Rudiment single hybrid motif Single hybrid motif 21
E set domains (Trans)glycosidases 22
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 21
Protein kinase-like (PK-like) cAMP-binding domain-like 21
Thioredoxin-like Nqo1 FMN-binding domain-like 22
Chaperone J-domain HSP40/DnaJ peptide-binding domain 22
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 22
GreA transcript cleavage protein, N-terminal domain FKBP-like 21
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 22
Cytochrome c C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase 21
Thioredoxin-like Nqo1C-terminal domain-like 22
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 22
GroEL-intermediate domain like GroEL apical domain-like 22
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 21
Adenine nucleotide alpha hydrolases-like DHS-like NAD/FAD-binding domain 21
Protein kinase-like (PK-like) GAF domain-like 22
Metal cation-transporting ATPase, ATP-binding domain N HAD-like 21
Carbamate kinase-like ACT-like 21
4Fe-4S ferredoxins ADC-like 22
Metal cation-transporting ATPase, ATP-binding domain N Calcium ATPase, transmembrane domain M 21
Aminoacid dehydrogenase-like, N-terminal domain Isocitrate/Isopropylmalate dehydrogenase-like 21
4Fe-4S ferredoxins Thiamin diphosphate-binding fold (THDP-binding) 22
PK beta-barrel domain-like PK C-terminal domain-like 21
GAF domain-like Homeodomain-like 22
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 21
Protein kinase-like (PK-like) P-loop containing nucleoside triphosphate hydrolases 22
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 21
FAD-binding/transporter-associated domain-like CO dehydrogenase flavoprotein C-terminal domain-like 22
Nucleotidyltransferase Nucleotidyltransferase substrate binding subunit/domain 22
Rho N-terminal domain-like Nucleic acid-binding proteins 11
Hemerythrin-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Translation proteins Initiation factor IF2/eIF5b, domain 3 11
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 11
PLP-dependent transferases Ornithine decarboxylase C-terminal domain 11
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 11
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 11
DinB/YfiT-like putative metalloenzymes C-type lectin-like 11
HAMP domain-like CheY-like 11
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 11
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 11
Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha) Thioredoxin-like 11
Protein kinase-like (PK-like) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
WD40 repeat-like Putative isomerase YbhE 11
lambda repressor-like DNA-binding domains P-loop containing nucleoside triphosphate hydrolases 11
PPK N-terminal domain-like PHP14-like 11
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 11
RmlC-like cupins RmlC-like cupins 11
Pseudouridine synthase PUA domain-like 11
5' to 3' exonuclease, C-terminal subdomain DNA/RNA polymerases 11
Nitrite/Sulfite reductase N-terminal domain-like Nitrite/Sulfite reductase N-terminal domain-like 11
2Fe-2S ferredoxin-like FAD-binding/transporter-associated domain-like 11
"Winged helix" DNA-binding domain Chorismate lyase-like 11
RNase III domain-like dsRNA-binding domain-like 11
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 11
FAD/NAD(P)-binding domain ClpP/crotonase 11
Pili subunits RuvA domain 2-like 11
CBS-domain pair MgtE membrane domain-like 11
Protein kinase-like (PK-like) Homodimeric domain of signal transducing histidine kinase 11
Actin-like ATPase domain HD-domain/PDEase-like 11
Subtilisin-like Galactose-binding domain-like 11
FGAM synthase PurL, linker domain Class I glutamine amidotransferase-like 11
PIN domain-like P-loop containing nucleoside triphosphate hydrolases 11
Toll/Interleukin receptor TIR domain Caspase-like 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 11
Protein kinase-like (PK-like) HD-domain/PDEase-like 11
beta-lactamase/transpeptidase-like Penicillin-binding protein associated domain 11
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 11
MgtE N-terminal domain-like CBS-domain pair 11
FMN-linked oxidoreductases Alpha subunit of glutamate synthase, C-terminal domain 11
Ferritin-like Calcium ATPase, transmembrane domain M 11
S-adenosyl-L-methionine-dependent methyltransferases P-loop containing nucleoside triphosphate hydrolases 11
PYP-like sensor domain (PAS domain) Homeodomain-like 11
Nucleic acid-binding proteins PheT/TilS domain 11
FAD-binding/transporter-associated domain-like alpha-helical ferredoxin 11
CheY-like Methylesterase CheB, C-terminal domain 11
2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain Alkaline phosphatase-like 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
ADC synthase D-aminoacid aminotransferase-like PLP-dependent enzymes 11
Thioredoxin-like Thioredoxin-like 11
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 11
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 11
Hemerythrin-like CheY-like 11
HAMP domain-like EAL domain-like 11
Homeodomain-like Homeodomain-like 11
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 11
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
PP2C-like Protein kinase-like (PK-like) 11
Nucleotidyltransferase substrate binding subunit/domain ACT-like 11
MgtE N-terminal domain-like MgtE membrane domain-like 11
Globin-like Riboflavin synthase domain-like 11
CO dehydrogenase ISP C-domain like FAD-binding/transporter-associated domain-like 11
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 11
Nucleotide-diphospho-sugar transferases Alkaline phosphatase-like 11
Urease metallochaperone UreE, N-terminal domain Urease metallochaperone UreE, C-terminal domain 11
Carbon-nitrogen hydrolase Adenine nucleotide alpha hydrolases-like 11
alpha-helical ferredoxin Nucleotide-binding domain 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
Single hybrid motif FAD/NAD-linked reductases, dimerisation (C-terminal) domain 11
C-type lectin-like S-adenosyl-L-methionine-dependent methyltransferases 11
Cupredoxins Cupredoxins 11
Putative DNA-binding domain CheY-like 11
PDZ domain-like ClpP/crotonase 11
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
PEP carboxykinase N-terminal domain PEP carboxykinase-like 11
PheT/TilS domain Putative DNA-binding domain 11
Histidine-containing phosphotransfer domain, HPT domain Histidine-containing phosphotransfer domain, HPT domain 11
PUA domain-like S-adenosyl-L-methionine-dependent methyltransferases 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleic acid-binding proteins 11
Nucleotidyltransferase substrate binding subunit/domain Nucleotidyltransferase substrate binding subunit/domain 11
PIN domain-like Ribonuclease H-like 11
Ligand-binding domain in the NO signalling and Golgi transport ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Putative DNA-binding domain Initiation factor IF2/eIF5b, domain 3 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphoenolpyruvate/pyruvate domain 11
FGAM synthase PurL, linker domain PurM N-terminal domain-like 11
Rho N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
Rad51 N-terminal domain-like Rad51 N-terminal domain-like 11
HMA, heavy metal-associated domain Cation efflux protein transmembrane domain-like 11
CarD-like TRCF domain-like 11
FGAM synthase PurL, linker domain PurM C-terminal domain-like 11
Periplasmic binding protein-like II ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Tropomyosin Duplicated hybrid motif 11
Dihydropteroate synthetase-like Methionine synthase activation domain-like 11
RBP11-like subunits of RNA polymerase C-terminal domain of RNA polymerase alpha subunit 11
PPK N-terminal domain-like Phospholipase D/nuclease 11
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 11
RuvA domain 2-like DNA helicase RuvA subunit, C-terminal domain 11
Nucleic acid-binding proteins BRCT domain 11
Cobalamin (vitamin B12)-binding domain P-loop containing nucleoside triphosphate hydrolases 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphohistidine domain 11
Chemotaxis receptor methyltransferase CheR, N-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 11
Putative DNA-binding domain Anticodon-binding domain of PheRS 11
N-terminal domain of bifunctional PutA protein FAD-linked oxidoreductase 11
PurS-like PurM C-terminal domain-like 11
CO dehydrogenase ISP C-domain like CO dehydrogenase flavoprotein C-terminal domain-like 11
P-loop containing nucleoside triphosphate hydrolases LexA/Signal peptidase 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Nucleic acid-binding proteins 11
PurM C-terminal domain-like Class I glutamine amidotransferase-like 11
WD40 repeat-like WD40 repeat-like 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
PilZ domain-like PilZ domain-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 11
Transcription factor NusA, N-terminal domain Prokaryotic type KH domain (KH-domain type II) 11
Fe-S cluster assembly (FSCA) domain-like P-loop containing nucleoside triphosphate hydrolases 11
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 11
Methylglyoxal synthase-like Cytidine deaminase-like 11
PurS-like Class I glutamine amidotransferase-like 11
ACT-like Formyltransferase 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 11
S-adenosyl-L-methionine-dependent methyltransferases LexA/Signal peptidase 11
Tex N-terminal region-like Nucleic acid-binding proteins 11
Aconitase B, N-terminal domain Aconitase iron-sulfur domain 11
RelE-like RelE-like 11
DNA-glycosylase Nudix 11
Metalloproteases ("zincins"), catalytic domain PDZ domain-like 11
Trigger factor ribosome-binding domain FKBP-like 11
PIN domain-like DNA/RNA polymerases 11
Periplasmic binding protein-like II Homodimeric domain of signal transducing histidine kinase 11
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 11
GroEL-intermediate domain like GroEL-intermediate domain like 11
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 11
FAD/NAD(P)-binding domain HI0933 insert domain-like 11
HD-domain/PDEase-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
SMAD/FHA domain SMAD/FHA domain 11
Nucleic acid-binding proteins S-adenosyl-L-methionine-dependent methyltransferases 11
RuvA domain 2-like JAB1/MPN domain 11
Putative DNA-binding domain P-loop containing nucleoside triphosphate hydrolases 11
Nucleotidylyl transferase Nucleic acid-binding proteins 11
Voltage-gated potassium channels NAD(P)-binding Rossmann-fold domains 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
N-terminal domain of bifunctional PutA protein ALDH-like 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleotidylyl transferase 11
Metallo-dependent phosphatases 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain 11
Ligand-binding domain in the NO signalling and Golgi transport Homodimeric domain of signal transducing histidine kinase 11
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 11
YajQ-like YajQ-like 11
CBS-domain pair CBS-domain pair 11
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 11
Transcription factor NusA, N-terminal domain Nucleic acid-binding proteins 11
P-loop containing nucleoside triphosphate hydrolases CarD-like 11
Carbamate kinase-like Acyl-CoA N-acyltransferases (Nat) 11
N-acetylmuramoyl-L-alanine amidase-like PGBD-like 11
Nucleotide-binding domain FAD-linked reductases, C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases ACT-like 11
Acyl-CoA N-acyltransferases (Nat) Acyl-CoA N-acyltransferases (Nat) 11
Adenine nucleotide alpha hydrolases-like PheT/TilS domain 11
Nucleic acid-binding proteins ArfGap/RecO-like zinc finger 11
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 11
Putative DNA-binding domain Cobalamin (vitamin B12)-binding domain 11
Nitrous oxide reductase, N-terminal domain Cupredoxins 11
FAD/NAD(P)-binding domain Nitrite/Sulfite reductase N-terminal domain-like 11
Prokaryotic type I DNA topoisomerase Zinc beta-ribbon 11
Bacterial muramidases Lysozyme-like 11
Phospholipase D/nuclease LexA/Signal peptidase 11
PurS-like FGAM synthase PurL, linker domain 11
Glutamyl tRNA-reductase catalytic, N-terminal domain NAD(P)-binding Rossmann-fold domains 11
Riboflavin synthase domain-like Riboflavin synthase domain-like 11
PLP-dependent transferases PLP-dependent transferases 11
Alkaline phosphatase-like Concanavalin A-like lectins/glucanases 11
Protein kinase-like (PK-like) PYP-like sensor domain (PAS domain) 11
Homocysteine S-methyltransferase Cobalamin (vitamin B12)-binding domain 11
Epsilon subunit of F1F0-ATP synthase N-terminal domain Epsilon subunit of F1F0-ATP synthase C-terminal domain 11
NAD(P)-binding Rossmann-fold domains ACT-like 11
Aldehyde ferredoxin oxidoreductase, N-terminal domain Aldehyde ferredoxin oxidoreductase, C-terminal domains 11
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
Pseudouridine synthase Aldolase 11
FMN-dependent nitroreductase-like FMN-dependent nitroreductase-like 11
Translation proteins Translation proteins 11
Ankyrin repeat Sigma2 domain of RNA polymerase sigma factors 11
Dihydropteroate synthetase-like Methionine synthase domain 11
PreATP-grasp domain PreATP-grasp domain 11
Sec-C motif NTF2-like 11
NAD(P)-binding Rossmann-fold domains RmlC-like cupins 11
CheC-like Surface presentation of antigens (SPOA) 11
Glutamine synthetase/guanido kinase GatB/YqeY motif 11
Chorismate mutase II Periplasmic binding protein-like II 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase HSP90 C-terminal domain 11
FKBP-like FKBP-like 11
"Winged helix" DNA-binding domain LexA/Signal peptidase 11
Glucocorticoid receptor-like (DNA-binding domain) P-loop containing nucleoside triphosphate hydrolases 11
L9 N-domain-like Ribosomal protein L9 C-domain 11
HD-domain/PDEase-like "Winged helix" DNA-binding domain 11
Aconitase B, N-terminal domain LeuD/IlvD-like 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
Quinoprotein alcohol dehydrogenase-like Calcium-dependent phosphotriesterase 11
Protein kinase-like (PK-like) CheY-like 11
Glutathione synthetase ATP-binding domain-like Phosphoenolpyruvate/pyruvate domain 11
Protein kinase-like (PK-like) Histidine-containing phosphotransfer domain, HPT domain 11
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 11
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
P-loop containing nucleoside triphosphate hydrolases Putative isomerase YbhE 11
Acetyl-CoA synthetase-like Glutathione synthetase ATP-binding domain-like 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
CBS-domain pair Nucleotide cyclase 11
Homocysteine S-methyltransferase Methionine synthase domain 11
PreATP-grasp domain Methylglyoxal synthase-like 11
Methionine synthase domain Cobalamin (vitamin B12)-binding domain 11
YrdC/RibB RibA-like 11
Periplasmic binding protein-like II EAL domain-like 11
Acyl-CoA N-acyltransferases (Nat) beta-carbonic anhydrase, cab 11
Ligand-binding domain in the NO signalling and Golgi transport Homeodomain-like 11
P-loop containing nucleoside triphosphate hydrolases Histidine-containing phosphotransfer domain, HPT domain 11
P-loop containing nucleoside triphosphate hydrolases Cobalamin (vitamin B12)-dependent enzymes 11
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 11
Cytidine deaminase-like Dihydrofolate reductase-like 11
Nucleotidylyl transferase Ribosomal protein L25-like 11
Periplasmic binding protein-like II ACT-like 11
Ferritin-like Calcium ATPase, transduction domain A 11
Class II aaRS and biotin synthetases GAD domain-like 11
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 11
PUA domain-like alpha/beta knot 11
Class II aaRS and biotin synthetases YbaK/ProRS associated domain 11
Sensory domain-like Homodimeric domain of signal transducing histidine kinase 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
YgfB-like Sec-C motif 11
Homocysteine S-methyltransferase Dihydropteroate synthetase-like 11
Tetrapyrrole methylase S-adenosyl-L-methionine-dependent methyltransferases 11
(Trans)glycosidases Nucleotide-diphospho-sugar transferases 11
Putative DNA-binding domain Translation proteins 11
Ferritin-like HAD-like 11
FAD/NAD(P)-binding domain 4Fe-4S ferredoxins 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
Aldolase RmlC-like cupins 11
Ribonuclease H-like DNA/RNA polymerases 11
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 11
HMA, heavy metal-associated domain HMA, heavy metal-associated domain 11
Alpha-L RNA-binding motif S-adenosyl-L-methionine-dependent methyltransferases 11
Transcription factor NusA, N-terminal domain Rad51 N-terminal domain-like 11
RuvA domain 2-like RuvA domain 2-like 11
YbaK/ProRS associated domain Class II aaRS ABD-related 11
Prokaryotic type KH domain (KH-domain type II) Prokaryotic type KH domain (KH-domain type II) 11
Nucleotidyltransferase Nucleotidyltransferase 11
P-loop containing nucleoside triphosphate hydrolases Hypothetical protein YjiA, C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 11
Voltage-gated potassium channels TrkA C-terminal domain-like 11
CBS-domain pair PYP-like sensor domain (PAS domain) 11
P-loop containing nucleoside triphosphate hydrolases C-terminal UvrC-binding domain of UvrB 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
Nucleic acid-binding proteins Anticodon-binding domain of PheRS 11
PH0987 N-terminal domain-like Cyclophilin-like 11
Dihydropteroate synthetase-like Cobalamin (vitamin B12)-binding domain 11
Adenine nucleotide alpha hydrolases-like MesJ substrate recognition domain-like 11
Translation proteins PRC-barrel domain 11
cAMP-binding domain-like CBS-domain pair 11
ParB/Sulfiredoxin KorB DNA-binding domain-like 11
PYP-like sensor domain (PAS domain) Methyl-accepting chemotaxis protein (MCP) signaling domain 11
2Fe-2S ferredoxin-like CO dehydrogenase flavoprotein C-terminal domain-like 11
Tryptophan synthase beta subunit-like PLP-dependent enzymes ACT-like 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
NagB/RpiA/CoA transferase-like 4Fe-4S ferredoxins 11
Prokaryotic type KH domain (KH-domain type II) Rad51 N-terminal domain-like 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 11
Single hybrid motif Single hybrid motif 11
C-terminal UvrC-binding domain of UvrB RuvA domain 2-like 11
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 11
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 11
DnaK suppressor protein DksA, alpha-hairpin domain Glucocorticoid receptor-like (DNA-binding domain) 11
OmpA-like Metalloproteases ("zincins"), catalytic domain 11
Translation proteins ThrRS/AlaRS common domain 11
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 11
Phospholipase D/nuclease P-loop containing nucleoside triphosphate hydrolases 11
Formyltransferase FMT C-terminal domain-like 11
FAD-linked reductases, C-terminal domain 4Fe-4S ferredoxins 11
DsbC/DsbG N-terminal domain-like Thioredoxin-like 11
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 11
N-terminal domain of DnaB helicase P-loop containing nucleoside triphosphate hydrolases 11
Hypothetical protein SAV1430 Fe-S cluster assembly (FSCA) domain-like 11
TGS-like Class II aaRS and biotin synthetases 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FMN-linked oxidoreductases 11
Sensory domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
Single hybrid motif FAD/NAD(P)-binding domain 11
Class II aaRS and biotin synthetases C-terminal domain of transcriptional repressors 11
Tex N-terminal region-like Ribonuclease H-like 11
Nudix "Winged helix" DNA-binding domain 11
GAF domain-like EspE N-terminal domain-like 11
Homocysteine S-methyltransferase Methionine synthase activation domain-like 11
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Pyrimidine nucleoside phosphorylase C-terminal domain 11
Thioesterase/thiol ester dehydrase-isomerase Isocitrate/Isopropylmalate dehydrogenase-like 11
MetI-like MetI-like 11
EreA/ChaN-like PDZ domain-like 11
GAF domain-like Histidine-containing phosphotransfer domain, HPT domain 11
NagB/RpiA/CoA transferase-like D-ribose-5-phosphate isomerase (RpiA), lid domain 11
5' to 3' exonuclease, C-terminal subdomain Ribonuclease H-like 11
Toll/Interleukin receptor TIR domain CheY-like 11
Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases 11
PurM N-terminal domain-like Class I glutamine amidotransferase-like 11
Nucleotidylyl transferase YegP-like 11
Nitrite and sulphite reductase 4Fe-4S domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
Metalloproteases ("zincins"), catalytic domain Collagen-binding domain 11
Zinc beta-ribbon Prokaryotic SH3-related domain 11
Methionine synthase domain Methionine synthase activation domain-like 11
GIY-YIG endonuclease RuvA domain 2-like 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
Cytochrome c oxidase subunit II-like, transmembrane region Cytochrome c 11
Transmembrane di-heme cytochromes a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 11
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 11
FAD-binding/transporter-associated domain-like Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain 11
beta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like 11
CheY-like TPR-like 11
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
Nucleic acid-binding proteins Putative DNA-binding domain 11
MFS general substrate transporter MFS general substrate transporter 11
Nucleotidylyl transferase Riboflavin kinase-like 11
Barwin-like endoglucanases Sporulation related repeat 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11
Nudix Thiamin phosphate synthase 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
Hemerythrin-like Homodimeric domain of signal transducing histidine kinase 11
Elongation factor Ts (EF-Ts), dimerisation domain Elongation factor Ts (EF-Ts), dimerisation domain 11
CBS-domain pair EAL domain-like 11
HCP-like Lysozyme-like 11
TGS-like Class II aaRS ABD-related 11
Periplasmic binding protein-like II GAF domain-like 11
HprK N-terminal domain-like PEP carboxykinase-like 11
P-loop containing nucleoside triphosphate hydrolases Homodimeric domain of signal transducing histidine kinase 11
S-adenosyl-L-methionine-dependent methyltransferases Phospholipase D/nuclease 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
HD-domain/PDEase-like GAF domain-like 11
Globin-like Ferredoxin reductase-like, C-terminal NADP-linked domain 11
DNA clamp DNA clamp 11
FMN-linked oxidoreductases ClpP/crotonase 11
Macro domain-like Zn-dependent exopeptidases 11
Glutamyl tRNA-reductase catalytic, N-terminal domain Glutamyl tRNA-reductase dimerization domain 11
N-terminal domain of MutM-like DNA repair proteins Glucocorticoid receptor-like (DNA-binding domain) 11
Nucleotidyltransferase substrate binding subunit/domain HD-domain/PDEase-like 11
Cupredoxins Cytochrome c 11
FMN-binding split barrel UbiD C-terminal domain-like 11
Ribosomal protein L6 Ribosomal protein L6 11
Zinc beta-ribbon DNA primase core 11
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
Nucleic acid-binding proteins Rad51 N-terminal domain-like 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
Nucleic acid-binding proteins GAD domain-like 11
FabD/lysophospholipase-like FabD/lysophospholipase-like 11
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 11
Periplasmic binding protein-like II Nucleotide cyclase 11
Thioesterase/thiol ester dehydrase-isomerase Thioesterase/thiol ester dehydrase-isomerase 11
GroES-like GroES-like 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
Nucleic acid-binding proteins DNA helicase RuvA subunit, C-terminal domain 11
Cytochrome c oxidase subunit II-like, transmembrane region Cupredoxins 11
Periplasmic binding protein-like II PYP-like sensor domain (PAS domain) 11
Ligand-binding domain in the NO signalling and Golgi transport P-loop containing nucleoside triphosphate hydrolases 11
P-loop containing nucleoside triphosphate hydrolases HRDC-like 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 11
Toll/Interleukin receptor TIR domain NTF2-like 11
Carbamate kinase-like PUA domain-like 11
MesJ substrate recognition domain-like PheT/TilS domain 11
Chaperone J-domain HSC20 (HSCB), C-terminal oligomerisation domain 11
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 11
FAD/NAD(P)-binding domain Nitrite and sulphite reductase 4Fe-4S domain-like 11
Homo-oligomeric flavin-containing Cys decarboxylases, HFCD CoaB-like 11
GspK insert domain-like RuvA domain 2-like 11
lambda repressor-like DNA-binding domains S-adenosyl-L-methionine-dependent methyltransferases 11
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 11
FliG FliG 11
Zinc beta-ribbon DNA primase DnaG, C-terminal domain 11
Galactose-binding domain-like Galactose-binding domain-like 11
FAD-linked oxidases, C-terminal domain FAD-linked oxidases, C-terminal domain 11
GIY-YIG endonuclease C-terminal UvrC-binding domain of UvrB 11
TolB, N-terminal domain Tricorn protease N-terminal domain 11
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 11
Nucleotidylyl transferase tRNA-binding arm 11
YjeF N-terminal domain-like Ribokinase-like 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
HAMP domain-like GAF domain-like 11
Hsp33 domain HSP33 redox switch-like 11
Sensory domain-like Nucleotide cyclase 11
"Winged helix" DNA-binding domain Phosphotyrosine protein phosphatases I 11
CbiG N-terminal domain-like CobE/GbiG C-terminal domain-like 11
UDP-Glycosyltransferase/glycogen phosphorylase UDP-Glycosyltransferase/glycogen phosphorylase 11
alpha/beta-Hydrolases alpha/beta-Hydrolases 11
Ribosomal protein S5 domain 2-like HSP90 C-terminal domain 11
NagB/RpiA/CoA transferase-like alpha-helical ferredoxin 11
Nucleotide-diphospho-sugar transferases UDP-Glycosyltransferase/glycogen phosphorylase 11
DNA primase core DNA primase DnaG, C-terminal domain 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain ACT-like 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
Chorismate mutase II ACT-like 11
Cobalamin (vitamin B12)-binding domain Methionine synthase activation domain-like 11
S13-like H2TH domain Glucocorticoid receptor-like (DNA-binding domain) 11
post-HMGL domain-like 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 11
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 11
Tex N-terminal region-like RuvA domain 2-like 11
Restriction endonuclease-like Zinc beta-ribbon 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 11
P-loop containing nucleoside triphosphate hydrolases TGS-like 11
TGS-like ThrRS/AlaRS common domain 11
Ribonuclease H-like Nucleic acid-binding proteins 11
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 11
Adenine nucleotide alpha hydrolases-like Adenine nucleotide alpha hydrolases-like 11
RuvA domain 2-like BRCT domain 11
Heme-dependent peroxidases Heme-dependent peroxidases 11
Pentapeptide repeat-like Pentapeptide repeat-like 11
PurS-like PurM N-terminal domain-like 11
Class II aaRS and biotin synthetases Translation proteins 11
Regulatory protein AraC Homeodomain-like 11
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 11
FAD-linked oxidoreductase ALDH-like 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
Leukotriene A4 hydrolase N-terminal domain Metalloproteases ("zincins"), catalytic domain 11
P-loop containing nucleoside triphosphate hydrolases ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
P-loop containing nucleoside triphosphate hydrolases WD40 repeat-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
PUA domain-like Ribosomal protein S5 domain 2-like 11
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 11
PheT/TilS domain Class II aaRS and biotin synthetases 11
PHP14-like Phospholipase D/nuclease 11
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 11
S-adenosyl-L-methionine-dependent methyltransferases S-adenosyl-L-methionine-dependent methyltransferases 11
Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), C-terminal domain 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Alpha subunit of glutamate synthase, C-terminal domain 11
FAD-linked oxidases, C-terminal domain alpha-helical ferredoxin 11
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 11
Enolase N-terminal domain-like Enolase C-terminal domain-like 11
PRTase-like PRTase-like 11
DinB/YfiT-like putative metalloenzymes S-adenosyl-L-methionine-dependent methyltransferases 11
TrmE connector domain P-loop containing nucleoside triphosphate hydrolases 11
NAD(P)-binding Rossmann-fold domains Glutamyl tRNA-reductase dimerization domain 11
EPT/RTPC-like P-loop containing nucleoside triphosphate hydrolases 11
Pili subunits GspK insert domain-like 11
Rhodanese/Cell cycle control phosphatase P-loop containing nucleoside triphosphate hydrolases 11
DNA ligase/mRNA capping enzyme, catalytic domain RuvA domain 2-like 11
PheT/TilS domain Anticodon-binding domain of PheRS 11
Ribonuclease H-like RuvA domain 2-like 11
Eukaryotic type KH-domain (KH-domain type I) Nucleic acid-binding proteins 11
Ligand-binding domain in the NO signalling and Golgi transport PYP-like sensor domain (PAS domain) 11
PGBD-like L,D-transpeptidase catalytic domain-like 11
Nucleic acid-binding proteins Prokaryotic type KH domain (KH-domain type II) 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 11
Nucleotide-diphospho-sugar transferases RmlC-like cupins 11
Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Pyrimidine nucleoside phosphorylase C-terminal domain 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
YhbC-like, N-terminal domain YhbC-like, C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases TrpR-like 11
Thioredoxin-like FAD/NAD(P)-binding domain 11

Jump to [ Top of page · Add/remove domain pairs · Add/remove genomes · Domain combination pairs ]