SUPERFAMILY 1.75 HMM library and genome assignments server

Domain combination pairs in Azotobacter vinelandii DJ

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

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Adjacent domain pairs graph

Graph of adjacent domain pairs.


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Domain combination pairs

783 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
"Winged helix" DNA-binding domain Periplasmic binding protein-like II 762
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 3613
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 3318
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 2410
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 245
Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase C-terminal domain-like 222
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 214
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 203
GroES-like NAD(P)-binding Rossmann-fold domains 183
Actin-like ATPase domain Actin-like ATPase domain 154
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 146
Thiolase-like Thiolase-like 133
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 133
Homeodomain-like Ribonuclease H-like 121
CheY-like C-terminal effector domain of the bipartite response regulators 122
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 124
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 118
Homeodomain-like Homeodomain-like 116
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 112
Thioredoxin-like GST C-terminal domain-like 112
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheY-like 119
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 114
beta-Roll beta-Roll 119
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 102
GAF domain-like P-loop containing nucleoside triphosphate hydrolases 104
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB transmembrane domain 103
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 103
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 103
Homodimeric domain of signal transducing histidine kinase CheY-like 108
Composite domain of metallo-dependent hydrolases Metallo-dependent hydrolases 105
GAF domain-like Homeodomain-like 104
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB transmembrane domain 103
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 104
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 103
EAL domain-like Nucleotide cyclase 106
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 93
lambda repressor-like DNA-binding domains Periplasmic binding protein-like I 91
CoA-dependent acyltransferases CoA-dependent acyltransferases 97
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 94
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 92
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 96
Homeodomain-like Tetracyclin repressor-like, C-terminal domain 92
Enolase N-terminal domain-like Enolase C-terminal domain-like 81
HAMP domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 84
HAMP domain-like Homodimeric domain of signal transducing histidine kinase 84
P-loop containing nucleoside triphosphate hydrolases MOP-like 81
Pectin lyase-like beta-Roll 85
CoA-dependent acyltransferases ACP-like 76
PYP-like sensor domain (PAS domain) Nucleotide cyclase 75
"Winged helix" DNA-binding domain GntR ligand-binding domain-like 71
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 74
"Winged helix" DNA-binding domain GAF domain-like 71
CheY-like Homeodomain-like 72
Calcium ATPase, transduction domain A HAD-like 76
P-loop containing nucleoside triphosphate hydrolases Translation proteins 76
CheY-like P-loop containing nucleoside triphosphate hydrolases 72
CoA-dependent acyltransferases Acetyl-CoA synthetase-like 76
Acetyl-CoA synthetase-like ACP-like 76
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 63
2Fe-2S ferredoxin-like Riboflavin synthase domain-like 61
Aldolase post-HMGL domain-like 63
RmlC-like cupins Homeodomain-like 62
PK beta-barrel domain-like PK C-terminal domain-like 61
HAD-like Calcium ATPase, transmembrane domain M 65
Ribosomal protein S5 domain 2-like P-loop containing nucleoside triphosphate hydrolases 66
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 61
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 61
2Fe-2S ferredoxin-like Ferredoxin reductase-like, C-terminal NADP-linked domain 61
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 66
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 65
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 52
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 53
ACT-like ACT-like 53
Homodimeric domain of signal transducing histidine kinase Histidine-containing phosphotransfer domain, HPT domain 55
6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 51
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 55
PurM N-terminal domain-like PurM C-terminal domain-like 52
PreATP-grasp domain Rudiment single hybrid motif 52
Cytochrome c Cytochrome c 54
Adenine nucleotide alpha hydrolases-like Adenine nucleotide alpha hydrolases-like 51
CBS-domain pair FAD-binding/transporter-associated domain-like 51
NAD(P)-binding Rossmann-fold domains UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 51
Homeodomain-like SIS domain 51
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Histidine-containing phosphotransfer domain, HPT domain 55
PYP-like sensor domain (PAS domain) EAL domain-like 54
Phospholipase D/nuclease Phospholipase D/nuclease 54
PLP-binding barrel Alanine racemase C-terminal domain-like 53
PYP-like sensor domain (PAS domain) Homeodomain-like 44
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 41
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 42
MetI-like MetI-like 42
Rhodanese/Cell cycle control phosphatase Rhodanese/Cell cycle control phosphatase 42
Triger factor/SurA peptide-binding domain-like FKBP-like 44
2Fe-2S ferredoxin-like CO dehydrogenase ISP C-domain like 42
(Trans)glycosidases Glycosyl hydrolase domain 44
Acetyl-CoA synthetase-like Acetyl-CoA synthetase-like 44
Formate dehydrogenase/DMSO reductase, domains 1-3 ADC-like 43
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 41
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 41
PYP-like sensor domain (PAS domain) PYP-like sensor domain (PAS domain) 44
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 41
CheY-like Histidine-containing phosphotransfer domain, HPT domain 44
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 44
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 41
PYP-like sensor domain (PAS domain) P-loop containing nucleoside triphosphate hydrolases 44
Adenine nucleotide alpha hydrolases-like DHS-like NAD/FAD-binding domain 41
HMA, heavy metal-associated domain HAD-like 44
NagB/RpiA/CoA transferase-like NagB/RpiA/CoA transferase-like 42
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 41
MOP-like MOP-like 42
Folate-binding domain Aminomethyltransferase beta-barrel domain 41
ACP-like ACP-like 44
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 43
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 44
cAMP-binding domain-like "Winged helix" DNA-binding domain 41
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 44
Alpha-L RNA-binding motif Pseudouridine synthase 42
Nucleic acid-binding proteins RuvA domain 2-like 44
HD-domain/PDEase-like ACT-like 32
PYP-like sensor domain (PAS domain) CheY-like 32
PYP-like sensor domain (PAS domain) GAF domain-like 33
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 33
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 32
Single hybrid motif CoA-dependent acyltransferases 32
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 33
EF-G C-terminal domain-like EF-G C-terminal domain-like 33
ClpP/crotonase 6-phosphogluconate dehydrogenase C-terminal domain-like 31
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 32
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 33
Aconitase iron-sulfur domain LeuD/IlvD-like 32
Acetyl-CoA synthetase-like alpha/beta-Hydrolases 32
ClpP/crotonase NAD(P)-binding Rossmann-fold domains 31
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 33
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 32
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 32
Nucleic acid-binding proteins Nucleic acid-binding proteins 33
lambda integrase-like, N-terminal domain DNA breaking-rejoining enzymes 31
E set domains (Trans)glycosidases 33
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 32
EspE N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 32
FAD-linked reductases, C-terminal domain 4Fe-4S ferredoxins 31
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 33
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex CoA-dependent acyltransferases 32
ACP-like alpha/beta-Hydrolases 32
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 32
TPR-like TPR-like 32
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 33
CoA-dependent acyltransferases alpha/beta-Hydrolases 32
CheY-like CheY-like 33
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 31
Trypsin-like serine proteases PDZ domain-like 33
Lysozyme-like beta-lactamase/transpeptidase-like 33
"Winged helix" DNA-binding domain Dimeric alpha+beta barrel 31
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 31
HlyD-like secretion proteins HlyD-like secretion proteins 31
Calcium-dependent phosphotriesterase beta-Roll 33
FAD/NAD(P)-binding domain 4Fe-4S ferredoxins 31
Class II aaRS and biotin synthetases Class II aaRS ABD-related 33
MurCD N-terminal domain MurD-like peptide ligases, catalytic domain 31
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 33
Single hybrid motif Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 32
MurCD N-terminal domain MurD-like peptide ligases, peptide-binding domain 31
6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 31
Translation proteins EF-G C-terminal domain-like 33
Nucleotidyltransferase ACT-like 32
Nucleotidyltransferase HD-domain/PDEase-like 32
Molybdenum cofactor-binding domain Molybdenum cofactor-binding domain 32
"Winged helix" DNA-binding domain NagB/RpiA/CoA transferase-like 31
Nucleotidyltransferase Nucleotidyltransferase substrate binding subunit/domain 22
Flavoproteins Ferredoxin reductase-like, C-terminal NADP-linked domain 22
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 21
Chaperone J-domain HSP40/DnaJ peptide-binding domain 22
CO dehydrogenase molybdoprotein N-domain-like Molybdenum cofactor-binding domain 22
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphoenolpyruvate/pyruvate domain 22
NagB/RpiA/CoA transferase-like D-ribose-5-phosphate isomerase (RpiA), lid domain 21
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 21
PDZ domain-like PDZ domain-like 22
Cupredoxins Cupredoxins 22
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 21
PDZ domain-like ClpP/crotonase 21
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 22
Cupredoxins Cytochrome c 22
PLP-dependent transferases PLP-dependent transferases 21
NAD(P)-binding Rossmann-fold domains ACT-like 22
HAMP domain-like Histidine-containing phosphotransfer domain, HPT domain 22
Aminopeptidase/glucanase lid domain Zn-dependent exopeptidases 21
Protein kinase-like (PK-like) P-loop containing nucleoside triphosphate hydrolases 22
Sensory domain-like Nucleotide cyclase 21
GroEL equatorial domain-like GroEL apical domain-like 22
Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), C-terminal domain 21
YrdC/RibB RibA-like 21
GroEL-intermediate domain like GroEL apical domain-like 22
Metal cation-transporting ATPase, ATP-binding domain N HAD-like 21
Class II aaRS and biotin synthetases ThrRS/AlaRS common domain 22
Sensory domain-like Sensory domain-like 21
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 22
Periplasmic binding protein-like II Lysozyme-like 22
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 21
2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain Alkaline phosphatase-like 21
GroEL equatorial domain-like GroEL-intermediate domain like 22
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 21
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 22
"Winged helix" DNA-binding domain MOP-like 21
Metal cation-transporting ATPase, ATP-binding domain N Calcium ATPase, transmembrane domain M 21
RuvA domain 2-like RuvA domain 2-like 22
Lysozyme-like PGBD-like 22
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 22
Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 22
Sensory domain-like Homodimeric domain of signal transducing histidine kinase 22
E set domains Glycosyl hydrolase domain 22
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphohistidine domain 22
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 21
Nucleotidyltransferase TGS-like 21
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 22
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 21
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 21
gp5 N-terminal domain-like Phage fibre proteins 21
TGS-like ACT-like 21
Nqo1 FMN-binding domain-like alpha-helical ferredoxin 22
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 22
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 22
Sensory domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 22
Flavoproteins Riboflavin synthase domain-like 22
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 21
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 22
Calcium ATPase, transduction domain A Metal cation-transporting ATPase, ATP-binding domain N 21
DsbC/DsbG N-terminal domain-like Thioredoxin-like 21
P-loop containing nucleoside triphosphate hydrolases Hypothetical protein YjiA, C-terminal domain 22
Nucleic acid-binding proteins Translation proteins SH3-like domain 22
PUA domain-like Ribosomal protein S5 domain 2-like 22
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 22
ISP domain Bet v1-like 22
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 22
TTHA1013/TTHA0281-like Ribbon-helix-helix 21
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 22
Fic-like "Winged helix" DNA-binding domain 21
Phage tail proteins Phage fibre proteins 21
Ligand-binding domain in the NO signalling and Golgi transport P-loop containing nucleoside triphosphate hydrolases 21
HAMP domain-like CheY-like 22
HAMP domain-like PYP-like sensor domain (PAS domain) 22
CheY-like HD-domain/PDEase-like 21
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 22
Glucocorticoid receptor-like (DNA-binding domain) P-loop containing nucleoside triphosphate hydrolases 22
P-loop containing nucleoside triphosphate hydrolases Restriction endonuclease-like 22
Pentapeptide repeat-like Pentapeptide repeat-like 22
tRNA-binding arm Class II aaRS and biotin synthetases 21
Penicillin binding protein dimerisation domain beta-lactamase/transpeptidase-like 21
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 22
Sm-like ribonucleoproteins Mechanosensitive channel protein MscS (YggB), C-terminal domain 21
Galactose mutarotase-like E set domains 21
P-loop containing nucleoside triphosphate hydrolases HprK N-terminal domain-like 21
HprK N-terminal domain-like Isocitrate/Isopropylmalate dehydrogenase-like 21
Phage tail proteins gp5 N-terminal domain-like 21
Diaminopimelate epimerase-like Diaminopimelate epimerase-like 21
"Winged helix" DNA-binding domain PLP-dependent transferases 21
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 21
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 22
P-loop containing nucleoside triphosphate hydrolases Isocitrate/Isopropylmalate dehydrogenase-like 21
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
Phage tail proteins Phage tail proteins 21
HD-domain/PDEase-like TGS-like 21
Nucleotidyltransferase Poly A polymerase C-terminal region-like 22
Pectin lyase-like Pectin lyase-like 22
FAD/NAD(P)-binding domain HI0933 insert domain-like 21
DnaK suppressor protein DksA, alpha-hairpin domain Glucocorticoid receptor-like (DNA-binding domain) 21
DNA ligase/mRNA capping enzyme, catalytic domain RuvA domain 2-like 22
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 22
GreA transcript cleavage protein, N-terminal domain FKBP-like 21
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 22
Ligand-binding domain in the NO signalling and Golgi transport Homeodomain-like 21
Histidine-containing phosphotransfer domain, HPT domain CheW-like 11
Zinc beta-ribbon Zinc beta-ribbon 11
Transcription factor NusA, N-terminal domain Nucleic acid-binding proteins 11
TGS-like Class II aaRS ABD-related 11
P-loop containing nucleoside triphosphate hydrolases TrpR-like 11
CheC-like Surface presentation of antigens (SPOA) 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) Homeodomain-like 11
CheY-like Methylesterase CheB, C-terminal domain 11
THUMP domain-like Adenine nucleotide alpha hydrolases-like 11
Class II aaRS and biotin synthetases GAD domain-like 11
Chorismate mutase II Periplasmic binding protein-like II 11
TSP type-3 repeat OmpA-like 11
Phoshotransferase/anion transport protein Phosphohistidine domain 11
P-loop containing nucleoside triphosphate hydrolases PGBD-like 11
Homeodomain-like Methylated DNA-protein cysteine methyltransferase domain 11
RNase III domain-like dsRNA-binding domain-like 11
GAF domain-like Phosphoenolpyruvate/pyruvate domain 11
Class I glutamine amidotransferase-like Homeodomain-like 11
PP2C-like Protein kinase-like (PK-like) 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
Cryptochrome/photolyase, N-terminal domain Cryptochrome/photolyase FAD-binding domain 11
Metallo-dependent phosphatases 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain 11
TerB-like Chaperone J-domain 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
P-loop containing nucleoside triphosphate hydrolases Ankyrin repeat 11
Nucleotidylyl transferase YegP-like 11
Fumarylacetoacetate hydrolase, FAH, N-terminal domain FAH 11
Prokaryotic type KH domain (KH-domain type II) Prokaryotic type KH domain (KH-domain type II) 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
GAF domain-like Nucleotide cyclase 11
PPK N-terminal domain-like PHP14-like 11
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 11
Xylose isomerase-like Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 11
Class II aaRS and biotin synthetases Translation proteins 11
NAD(P)-binding Rossmann-fold domains TrkA C-terminal domain-like 11
Transmembrane di-heme cytochromes a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 11
Translation proteins PRC-barrel domain 11
FabD/lysophospholipase-like ACP-like 11
vWA-like TPR-like 11
Soluble quinoprotein glucose dehydrogenase beta-Roll 11
Zinc beta-ribbon DNA primase core 11
FAD-binding/transporter-associated domain-like Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain 11
Nucleic acid-binding proteins PheT/TilS domain 11
Adenine nucleotide alpha hydrolases-like Rhodanese/Cell cycle control phosphatase 11
Nitrite/Sulfite reductase N-terminal domain-like Nitrite/Sulfite reductase N-terminal domain-like 11
Regulatory protein AraC Homeodomain-like 11
Methylglyoxal synthase-like Cytidine deaminase-like 11
FMN-linked oxidoreductases Alpha subunit of glutamate synthase, C-terminal domain 11
Acyl-CoA N-acyltransferases (Nat) Glutathione synthetase ATP-binding domain-like 11
GIY-YIG endonuclease C-terminal UvrC-binding domain of UvrB 11
Aconitase B, N-terminal domain LeuD/IlvD-like 11
Inosine monophosphate dehydrogenase (IMPDH) NAD(P)-binding Rossmann-fold domains 11
THUMP domain-like Rhodanese/Cell cycle control phosphatase 11
Fe-S cluster assembly (FSCA) domain-like P-loop containing nucleoside triphosphate hydrolases 11
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 11
FMN-linked oxidoreductases ACP-like 11
Soluble quinoprotein glucose dehydrogenase Calcium-dependent phosphotriesterase 11
Tex N-terminal region-like Ribonuclease H-like 11
Nucleic acid-binding proteins Putative DNA-binding domain 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
Globin-like Nucleotide cyclase 11
PIN domain-like P-loop containing nucleoside triphosphate hydrolases 11
FMN-dependent nitroreductase-like FMN-dependent nitroreductase-like 11
HAD-like UDP-Glycosyltransferase/glycogen phosphorylase 11
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 11
Ribonuclease PH domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 11
C-terminal UvrC-binding domain of UvrB RuvA domain 2-like 11
PGBD-like L,D-transpeptidase catalytic domain-like 11
P-loop containing nucleoside triphosphate hydrolases Homodimeric domain of signal transducing histidine kinase 11
Protein kinase-like (PK-like) Protein kinase-like (PK-like) 11
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 11
4Fe-4S ferredoxins ADC-like 11
2Fe-2S ferredoxin-like CO dehydrogenase flavoprotein C-terminal domain-like 11
Sec-C motif Sec-C motif 11
TPR-like UDP-Glycosyltransferase/glycogen phosphorylase 11
UDP-Glycosyltransferase/glycogen phosphorylase Nucleotide-diphospho-sugar transferases 11
FKBP-like FKBP-like 11
Homodimeric domain of signal transducing histidine kinase CheW-like 11
FMN-linked oxidoreductases NAD(P)-binding Rossmann-fold domains 11
Heme-dependent peroxidases Heme-dependent peroxidases 11
Cytochrome c oxidase subunit II-like, transmembrane region Cupredoxins 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 11
CheY-binding domain of CheA CheW-like 11
HPr-like Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 11
Siroheme synthase middle domains-like Tetrapyrrole methylase 11
Probable ACP-binding domain of malonyl-CoA ACP transacylase NAD(P)-binding Rossmann-fold domains 11
Nucleotide cyclase Nucleotide cyclase 11
Nucleotidylyl transferase Ribosomal protein L25-like 11
GIY-YIG endonuclease RuvA domain 2-like 11
Thiolase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 11
Nucleotidyltransferase substrate binding subunit/domain Nucleotidyltransferase substrate binding subunit/domain 11
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
EF-G C-terminal domain-like Ribosomal protein S5 domain 2-like 11
PUA domain-like alpha/beta knot 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FMN-linked oxidoreductases 11
Zn-dependent exopeptidases LysM domain 11
Purple acid phosphatase, N-terminal domain Metallo-dependent phosphatases 11
S13-like H2TH domain Glucocorticoid receptor-like (DNA-binding domain) 11
OMPA-like OmpA-like 11
N-terminal domain of bifunctional PutA protein FAD-linked oxidoreductase 11
CarD-like TRCF domain-like 11
Rho N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
Single hybrid motif alpha/beta-Hydrolases 11
Putative DNA-binding domain Initiation factor IF2/eIF5b, domain 3 11
Putative DNA-binding domain P-loop containing nucleoside triphosphate hydrolases 11
Cytochrome c oxidase subunit II-like, transmembrane region Cytochrome c 11
PurM C-terminal domain-like Class I glutamine amidotransferase-like 11
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 11
Nucleic acid-binding proteins DNA helicase RuvA subunit, C-terminal domain 11
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 11
Chaperone J-domain HSC20 (HSCB), C-terminal oligomerisation domain 11
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
HesB-like domain Fe-S cluster assembly (FSCA) domain-like 11
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 11
Homocysteine S-methyltransferase Cobalamin (vitamin B12)-binding domain 11
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 11
Aldolase Single hybrid motif 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
Molybdenum cofactor biosynthesis proteins MoeA C-terminal domain-like 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Eukaryotic type KH-domain (KH-domain type I) 11
CBS-domain pair MgtE membrane domain-like 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 11
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 11
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 11
SCP-like Clavaminate synthase-like 11
R1 subunit of ribonucleotide reductase, N-terminal domain Hedgehog/intein (Hint) domain 11
PheT/TilS domain Anticodon-binding domain of PheRS 11
Concanavalin A-like lectins/glucanases beta-Roll 11
GAF domain-like Phosphohistidine domain 11
Carbamate kinase-like PUA domain-like 11
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 11
P-loop containing nucleoside triphosphate hydrolases HRDC-like 11
ABC transporter involved in vitamin B12 uptake, BtuC ABC transporter involved in vitamin B12 uptake, BtuC 11
P-loop containing nucleoside triphosphate hydrolases Adenine nucleotide alpha hydrolases-like 11
PheT/TilS domain Class II aaRS and biotin synthetases 11
HAMP domain-like EAL domain-like 11
PYP-like sensor domain (PAS domain) Methyl-accepting chemotaxis protein (MCP) signaling domain 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
Rudiment single hybrid motif Single hybrid motif 11
alpha-helical ferredoxin Nucleotide-binding domain 11
Homocysteine S-methyltransferase Dihydropteroate synthetase-like 11
FMN-linked oxidoreductases Thiolase-like 11
E set domains E set domains 11
PurS-like Class I glutamine amidotransferase-like 11
Inosine monophosphate dehydrogenase (IMPDH) Probable ACP-binding domain of malonyl-CoA ACP transacylase 11
PIN domain-like DNA/RNA polymerases 11
YbaK/ProRS associated domain Class II aaRS ABD-related 11
Periplasmic binding protein-like II OmpA-like 11
Methylated DNA-protein cysteine methyltransferase domain Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
Nqo1 FMN-binding domain-like Nqo1 middle domain-like 11
Ribosomal protein S5 domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 11
Translation proteins Ribosomal protein S5 domain 2-like 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
PurS-like PurM C-terminal domain-like 11
DNA clamp DNA clamp 11
FabD/lysophospholipase-like NAD(P)-binding Rossmann-fold domains 11
Translation proteins Initiation factor IF2/eIF5b, domain 3 11
post-HMGL domain-like Single hybrid motif 11
FMN-linked oxidoreductases Nitrite and sulphite reductase 4Fe-4S domain-like 11
PPK N-terminal domain-like Phospholipase D/nuclease 11
(Trans)glycosidases Nucleotide-diphospho-sugar transferases 11
Porins P-loop containing nucleoside triphosphate hydrolases 11
Glutathione synthetase ATP-binding domain-like Single hybrid motif 11
ACT-like Formyltransferase 11
FMN-linked oxidoreductases Probable ACP-binding domain of malonyl-CoA ACP transacylase 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
Lysozyme-like LysM domain 11
Class II aaRS and biotin synthetases C-terminal domain of transcriptional repressors 11
"Winged helix" DNA-binding domain Class II aaRS and biotin synthetases 11
FMN-linked oxidoreductases FabD/lysophospholipase-like 11
"Winged helix" DNA-binding domain LexA/Signal peptidase 11
TGS-like Class II aaRS and biotin synthetases 11
Translation proteins ThrRS/AlaRS common domain 11
Globin-like Riboflavin synthase domain-like 11
RuvA domain 2-like DNA helicase RuvA subunit, C-terminal domain 11
Carbon-nitrogen hydrolase Adenine nucleotide alpha hydrolases-like 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
RuvA domain 2-like JAB1/MPN domain 11
all-alpha NTP pyrophosphatases all-alpha NTP pyrophosphatases 11
Thiolase-like ACP-like 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) Methylated DNA-protein cysteine methyltransferase domain 11
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 11
5' to 3' exonuclease, C-terminal subdomain Ribonuclease H-like 11
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 11
Thioesterase/thiol ester dehydrase-isomerase Thioesterase/thiol ester dehydrase-isomerase 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Adenine nucleotide alpha hydrolases-like 11
CBS-domain pair Nucleotide cyclase 11
Adenine nucleotide alpha hydrolases-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
FMN-binding split barrel UbiD C-terminal domain-like 11
Ribosome binding protein Y (YfiA homologue) Nucleic acid-binding proteins 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
SufE/NifU Fe-S cluster assembly (FSCA) domain-like 11
Eukaryotic type KH-domain (KH-domain type I) Nucleic acid-binding proteins 11
FGAM synthase PurL, linker domain PurM C-terminal domain-like 11
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 11
Rad51 N-terminal domain-like Rad51 N-terminal domain-like 11
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 11
Nudix Thiamin phosphate synthase 11
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 11
Translation proteins Translation proteins 11
Thiolase-like NAD(P)-binding Rossmann-fold domains 11
Probable ACP-binding domain of malonyl-CoA ACP transacylase ACP-like 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
Macro domain-like Zn-dependent exopeptidases 11
S-adenosyl-L-methionine-dependent methyltransferases S-adenosyl-L-methionine-dependent methyltransferases 11
Pseudouridine synthase PUA domain-like 11
GspK insert domain-like RuvA domain 2-like 11
P-loop containing nucleoside triphosphate hydrolases C-terminal UvrC-binding domain of UvrB 11
L9 N-domain-like Ribosomal protein L9 C-domain 11
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 11
PEP carboxykinase N-terminal domain PEP carboxykinase-like 11
ACP-like NAD(P)-binding Rossmann-fold domains 11
Galactose mutarotase-like Six-hairpin glycosidases 11
Prefoldin Nucleotide-diphospho-sugar transferases 11
Chorismate mutase II ACT-like 11
Dimeric alpha+beta barrel Dimeric alpha+beta barrel 11
2Fe-2S ferredoxin-like Formate dehydrogenase/DMSO reductase, domains 1-3 11
Leukotriene A4 hydrolase N-terminal domain Metalloproteases ("zincins"), catalytic domain 11
NAD(P)-binding Rossmann-fold domains Siroheme synthase middle domains-like 11
Homeodomain-like Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
Terpenoid cyclases/Protein prenyltransferases Terpenoid cyclases/Protein prenyltransferases 11
Cytidine deaminase-like Dihydrofolate reductase-like 11
P-loop containing nucleoside triphosphate hydrolases CarD-like 11
Phoshotransferase/anion transport protein Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 11
Glutamine synthetase/guanido kinase GatB/YqeY motif 11
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
Tryptophan synthase beta subunit-like PLP-dependent enzymes ACT-like 11
Methionine synthase domain Cobalamin (vitamin B12)-binding domain 11
Adenine nucleotide alpha hydrolases-like MesJ substrate recognition domain-like 11
Nucleotidyltransferase substrate binding subunit/domain HD-domain/PDEase-like 11
PLP-dependent transferases Ornithine decarboxylase C-terminal domain 11
Zinc beta-ribbon DNA primase DnaG, C-terminal domain 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 11
HPr-like Phosphohistidine domain 11
HAMP domain-like Nucleotide cyclase 11
Homing endonucleases PFL-like glycyl radical enzymes 11
Nucleotide-diphospho-sugar transferases RmlC-like cupins 11
PTS system IIB component-like PTS system IIB component-like 11
Tex N-terminal region-like RuvA domain 2-like 11
Homocysteine S-methyltransferase Methionine synthase domain 11
FAD-linked oxidases, C-terminal domain alpha-helical ferredoxin 11
LigB-like LigA subunit of an aromatic-ring-opening dioxygenase LigAB 11
lambda repressor-like DNA-binding domains RmlC-like cupins 11
MgtE N-terminal domain-like MgtE membrane domain-like 11
NAD(P)-binding Rossmann-fold domains EPT/RTPC-like 11
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 11
FliG FliG 11
Formyltransferase FMT C-terminal domain-like 11
4Fe-4S ferredoxins Iron-sulfur subunit of formate dehydrogenase N, transmembrane anchor 11
"Winged helix" DNA-binding domain S-adenosyl-L-methionine-dependent methyltransferases 11
Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha) Thioredoxin-like 11
P-loop containing nucleoside triphosphate hydrolases Prefoldin 11
Methionine synthase domain Methionine synthase activation domain-like 11
2Fe-2S ferredoxin-like FAD-binding/transporter-associated domain-like 11
Subtilisin-like beta-Roll 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
Prokaryotic type KH domain (KH-domain type II) Rad51 N-terminal domain-like 11
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 11
Adenine nucleotide alpha hydrolases-like PheT/TilS domain 11
TrkA C-terminal domain-like TrkA C-terminal domain-like 11
MesJ substrate recognition domain-like PheT/TilS domain 11
Rhodanese/Cell cycle control phosphatase P-loop containing nucleoside triphosphate hydrolases 11
Thiolase-like FabD/lysophospholipase-like 11
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 11
Urease metallochaperone UreE, N-terminal domain Urease metallochaperone UreE, C-terminal domain 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
Inosine monophosphate dehydrogenase (IMPDH) FabD/lysophospholipase-like 11
P-loop containing nucleoside triphosphate hydrolases C-terminal effector domain of the bipartite response regulators 11
GroEL-intermediate domain like GroEL-intermediate domain like 11
Nucleic acid-binding proteins S-adenosyl-L-methionine-dependent methyltransferases 11
PreATP-grasp domain Methylglyoxal synthase-like 11
RBP11-like subunits of RNA polymerase C-terminal domain of RNA polymerase alpha subunit 11
(Trans)glycosidases Protein kinase-like (PK-like) 11
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 11
MoeA N-terminal region -like MoeA C-terminal domain-like 11
ACT-like HAD-like 11
Nucleotidyltransferase Nucleotidyltransferase 11
Inosine monophosphate dehydrogenase (IMPDH) Thiolase-like 11
beta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase HSP90 C-terminal domain 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleotidylyl transferase 11
FMN-binding split barrel "Winged helix" DNA-binding domain 11
Inosine monophosphate dehydrogenase (IMPDH) ACP-like 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleic acid-binding proteins 11
GAF domain-like EAL domain-like 11
Nqo1 middle domain-like Nqo1C-terminal domain-like 11
Actin-like ATPase domain HD-domain/PDEase-like 11
2Fe-2S ferredoxin-like ADC-like 11
UROD/MetE-like UROD/MetE-like 11
FAD/NAD(P)-binding domain Nitrite and sulphite reductase 4Fe-4S domain-like 11
FGAM synthase PurL, linker domain PurM N-terminal domain-like 11
cAMP-binding domain-like Nucleotidyltransferase 11
Transcription factor NusA, N-terminal domain Rad51 N-terminal domain-like 11
Ribonuclease H-like HRDC-like 11
NAD(P)-binding Rossmann-fold domains Glutamyl tRNA-reductase dimerization domain 11
Phoshotransferase/anion transport protein Phoshotransferase/anion transport protein 11
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 11
Nqo5-like HydB/Nqo4-like 11
NagB/RpiA/CoA transferase-like alpha-helical ferredoxin 11
Hedgehog/intein (Hint) domain PFL-like glycyl radical enzymes 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
P-loop containing nucleoside triphosphate hydrolases TPR-like 11
Phoshotransferase/anion transport protein Phosphoenolpyruvate/pyruvate domain 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 11
GroES-like GroES-like 11
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 11
PurM N-terminal domain-like Class I glutamine amidotransferase-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheW-like 11
HMA, heavy metal-associated domain HMA, heavy metal-associated domain 11
MgtE N-terminal domain-like CBS-domain pair 11
Cobalamin (vitamin B12)-binding domain Methionine synthase activation domain-like 11
Tex N-terminal region-like Nucleic acid-binding proteins 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
Nudix Nudix 11
Glycerol-3-phosphate (1)-acyltransferase Acetyl-CoA synthetase-like 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
Putative DNA-binding domain Translation proteins 11
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 11
N-terminal domain of DnaB helicase P-loop containing nucleoside triphosphate hydrolases 11
R1 subunit of ribonucleotide reductase, N-terminal domain Homing endonucleases 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
4Fe-4S ferredoxins Formate dehydrogenase/DMSO reductase, domains 1-3 11
Thioredoxin-like Thioredoxin-like 11
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
NAD(P)-binding Rossmann-fold domains Tetrapyrrole methylase 11
Adenine nucleotide alpha hydrolases-like Homodimeric domain of signal transducing histidine kinase 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 11
Nucleotidyltransferase substrate binding subunit/domain ACT-like 11
GAF domain-like Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 11
NTF2-like NTF2-like 11
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 11
YajQ-like YajQ-like 11
Ribosomal protein S5 domain 2-like HSP90 C-terminal domain 11
Cytochrome c oxidase subunit I-like Cytochrome c oxidase subunit III-like 11
Ribonuclease H-like RuvA domain 2-like 11
DNA primase core DNA primase DnaG, C-terminal domain 11
"Winged helix" DNA-binding domain Actin-like ATPase domain 11
Carbamate kinase-like Acyl-CoA N-acyltransferases (Nat) 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Alpha subunit of glutamate synthase, C-terminal domain 11
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 11
"Winged helix" DNA-binding domain Phospholipase D/nuclease 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
Formate/glycerate dehydrogenase catalytic domain-like ACT-like 11
FMN-linked oxidoreductases Inosine monophosphate dehydrogenase (IMPDH) 11
Rhodanese/Cell cycle control phosphatase Ankyrin repeat 11
Nucleic acid-binding proteins ArfGap/RecO-like zinc finger 11
Hedgehog/intein (Hint) domain Homing endonucleases 11
"Winged helix" DNA-binding domain C-terminal domain of transcriptional repressors 11
Elongation factor Ts (EF-Ts), dimerisation domain Elongation factor Ts (EF-Ts), dimerisation domain 11
5' to 3' exonuclease, C-terminal subdomain DNA/RNA polymerases 11
L domain-like Protein kinase-like (PK-like) 11
EAL domain-like CBS-domain pair 11
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 11
CO dehydrogenase ISP C-domain like CO dehydrogenase flavoprotein C-terminal domain-like 11
PFL-like glycyl radical enzymes PFL-like glycyl radical enzymes 11
Homo-oligomeric flavin-containing Cys decarboxylases, HFCD CoaB-like 11
CheY-binding domain of CheA ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain ACT-like 11
Nucleotidylyl transferase Riboflavin kinase-like 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11
Histidine-containing phosphotransfer domain, HPT domain CheY-binding domain of CheA 11
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 11
Riboflavin synthase domain-like Riboflavin synthase domain-like 11
Ribonuclease H-like DNA/RNA polymerases 11
Periplasmic binding protein-like II ACT-like 11
CBS-domain pair Nucleotidyltransferase 11
Nucleic acid-binding proteins BRCT domain 11
Putative DNA-binding domain Anticodon-binding domain of PheRS 11
Nucleic acid-binding proteins Prokaryotic type KH domain (KH-domain type II) 11
Arabinanase/levansucrase/invertase Concanavalin A-like lectins/glucanases 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
Carbamate kinase-like ACT-like 11
Single hybrid motif Single hybrid motif 11
N-acetylmuramoyl-L-alanine amidase-like PGBD-like 11
Glutamyl tRNA-reductase catalytic, N-terminal domain Glutamyl tRNA-reductase dimerization domain 11
YhbC-like, N-terminal domain YhbC-like, C-terminal domain 11
Prokaryotic type I DNA topoisomerase Zinc beta-ribbon 11
Nucleotidylyl transferase tRNA-binding arm 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases 11
PRTase-like PRTase-like 11
Homeodomain-like Probable bacterial effector-binding domain 11
CRISPR-associated protein CRISPR-associated protein 11
N-terminal domain of bifunctional PutA protein ALDH-like 11
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 11
Ribosomal protein L6 Ribosomal protein L6 11
PurS-like FGAM synthase PurL, linker domain 11
Transcription factor NusA, N-terminal domain Prokaryotic type KH domain (KH-domain type II) 11
PreATP-grasp domain PreATP-grasp domain 11
Subtilisin-like Galactose-binding domain-like 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
Nucleic acid-binding proteins GAD domain-like 11
TrkA C-terminal domain-like FAD-binding/transporter-associated domain-like 11
DPP6 N-terminal domain-like alpha/beta-Hydrolases 11
Dihydropteroate synthetase-like Methionine synthase activation domain-like 11
TolB, N-terminal domain Tricorn protease N-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases Smc hinge domain 11
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 11
Glutathione synthetase ATP-binding domain-like Succinyl-CoA synthetase domains 11
HD-domain/PDEase-like "Winged helix" DNA-binding domain 11
PYP-like sensor domain (PAS domain) C-terminal effector domain of the bipartite response regulators 11
N-terminal domain of MutM-like DNA repair proteins Glucocorticoid receptor-like (DNA-binding domain) 11
PurS-like PurM N-terminal domain-like 11
Acylphosphatase/BLUF domain-like YrdC/RibB 11
beta-lactamase/transpeptidase-like Penicillin-binding protein associated domain 11
P-loop containing nucleoside triphosphate hydrolases TGS-like 11
Nucleic acid-binding proteins Anticodon-binding domain of PheRS 11
Ribonuclease H-like Nucleic acid-binding proteins 11
Dihydropteroate synthetase-like Methionine synthase domain 11
ClpP/crotonase ClpP/crotonase 11
ClpP/crotonase NfeD domain-like 11
HCP-like HCP-like 11
TrmE connector domain P-loop containing nucleoside triphosphate hydrolases 11
Thioredoxin-like FAD/NAD(P)-binding domain 11
DNA-glycosylase Nudix 11
L30e-like alpha/beta knot 11
Phoshotransferase/anion transport protein HPr-like 11
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 11
TGS-like ThrRS/AlaRS common domain 11
HRDC-like HRDC-like 11
Nucleic acid-binding proteins Rad51 N-terminal domain-like 11
PYP-like sensor domain (PAS domain) Histidine-containing phosphotransfer domain, HPT domain 11
Nucleotidylyl transferase Nucleic acid-binding proteins 11
S-adenosyl-L-methionine-dependent methyltransferases FAD/NAD(P)-binding domain 11
Radical SAM enzymes Nitrogenase accessory factor-like 11
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 11
PreATP-grasp domain Single hybrid motif 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 11
Peptidase/esterase 'gauge' domain alpha/beta-Hydrolases 11
S-adenosyl-L-methionine-dependent methyltransferases NAD(P)-binding Rossmann-fold domains 11
Galactose-binding domain-like beta-Roll 11
Barwin-like endoglucanases Sporulation related repeat 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
PHP14-like Phospholipase D/nuclease 11
FAD/NAD(P)-binding domain Nitrite/Sulfite reductase N-terminal domain-like 11
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Epsilon subunit of F1F0-ATP synthase N-terminal domain Epsilon subunit of F1F0-ATP synthase C-terminal domain 11
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
R1 subunit of ribonucleotide reductase, N-terminal domain PFL-like glycyl radical enzymes 11
Restriction endonuclease-like Zinc beta-ribbon 11
Nucleotide-diphospho-sugar transferases PilZ domain-like 11
RuvA domain 2-like BRCT domain 11
PH0987 N-terminal domain-like Cyclophilin-like 11
Aspartate/glutamate racemase Aspartate/glutamate racemase 11
cAMP-binding domain-like CBS-domain pair 11
Dihydropteroate synthetase-like Cobalamin (vitamin B12)-binding domain 11
PilZ domain-like HD-domain/PDEase-like 11
FAD-binding/transporter-associated domain-like alpha-helical ferredoxin 11
Glycosyl hydrolase domain Protein kinase-like (PK-like) 11
FGAM synthase PurL, linker domain Class I glutamine amidotransferase-like 11
Bacterial muramidases Lysozyme-like 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
FAD-linked oxidoreductase ALDH-like 11
PIN domain-like Ribonuclease H-like 11
Rho N-terminal domain-like Nucleic acid-binding proteins 11
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 11
Hsp33 domain HSP33 redox switch-like 11
HD-domain/PDEase-like P-loop containing nucleoside triphosphate hydrolases 11
MoeA N-terminal region -like Molybdenum cofactor biosynthesis proteins 11
P-loop containing nucleoside triphosphate hydrolases ACT-like 11
Putative isomerase YbhE MetI-like 11
CheY-like Nucleotide cyclase 11
TPR-like C-terminal effector domain of the bipartite response regulators 11
PheT/TilS domain Putative DNA-binding domain 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Nucleic acid-binding proteins 11
OMPA-like TSP type-3 repeat 11
CO dehydrogenase ISP C-domain like FAD-binding/transporter-associated domain-like 11
Isochorismatase-like hydrolases ACP-like 11
Homocysteine S-methyltransferase Methionine synthase activation domain-like 11
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 11
HPr-like Phosphoenolpyruvate/pyruvate domain 11
NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains 11
2Fe-2S ferredoxin-like alpha-helical ferredoxin 11
post-HMGL domain-like 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 11
Ribokinase-like Nucleotidylyl transferase 11
YjeF N-terminal domain-like Ribokinase-like 11
TPR-like Nucleotide-diphospho-sugar transferases 11
Sec-C motif NTF2-like 11
Glutathione synthetase ATP-binding domain-like Phosphoenolpyruvate/pyruvate domain 11
P-loop containing nucleoside triphosphate hydrolases Nucleotide-diphospho-sugar transferases 11
NE0471 N-terminal domain-like lambda repressor-like DNA-binding domains 11
PUA domain-like S-adenosyl-L-methionine-dependent methyltransferases 11
Nitrite and sulphite reductase 4Fe-4S domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
YbaK/ProRS associated domain HD-domain/PDEase-like 11
Zinc beta-ribbon Prokaryotic SH3-related domain 11
Glutamyl tRNA-reductase catalytic, N-terminal domain NAD(P)-binding Rossmann-fold domains 11
6-phosphogluconate dehydrogenase C-terminal domain-like EPT/RTPC-like 11
2Fe-2S ferredoxin-like 4Fe-4S ferredoxins 11
Thermostable phytase (3-phytase) Thermostable phytase (3-phytase) 11
Globin-like Ferredoxin reductase-like, C-terminal NADP-linked domain 11
Galactose-binding domain-like Galactose-binding domain-like 11
Chemotaxis receptor methyltransferase CheR, N-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 11
CheY-binding domain of CheA Homodimeric domain of signal transducing histidine kinase 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Nucleic acid-binding proteins 11
FAD-binding/transporter-associated domain-like CO dehydrogenase flavoprotein C-terminal domain-like 11
Aconitase B, N-terminal domain Aconitase iron-sulfur domain 11
Nqo1 FMN-binding domain-like Nqo1C-terminal domain-like 11
Trigger factor ribosome-binding domain FKBP-like 11
Class II aaRS and biotin synthetases YbaK/ProRS associated domain 11

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