SUPERFAMILY 1.75 HMM library and genome assignments server

Domain combination pairs in Thioalkalivibrio sulfidophilus HL-EbGr7

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

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Adjacent domain pairs graph

Graph of adjacent domain pairs.


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Domain combination pairs

630 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
Nucleotide cyclase EAL domain-like 2417
PYP-like sensor domain (PAS domain) Nucleotide cyclase 2317
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 2111
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 2014
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 175
PYP-like sensor domain (PAS domain) EAL domain-like 1612
"Winged helix" DNA-binding domain Periplasmic binding protein-like II 141
PYP-like sensor domain (PAS domain) PYP-like sensor domain (PAS domain) 1210
CheY-like P-loop containing nucleoside triphosphate hydrolases 122
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB transmembrane domain 115
CheY-like Homeodomain-like 111
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 115
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB transmembrane domain 115
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 115
Actin-like ATPase domain Actin-like ATPase domain 103
Cytochrome c Cytochrome c 102
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 103
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 104
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 104
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 104
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 96
HAD-like Calcium ATPase, transmembrane domain M 96
Calcium ATPase, transduction domain A HAD-like 96
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 92
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 94
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 84
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 72
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 72
CheY-like Nucleotide cyclase 76
P-loop containing nucleoside triphosphate hydrolases Translation proteins 75
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 64
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 66
HAMP domain-like Nucleotide cyclase 64
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 64
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 64
CheY-like C-terminal effector domain of the bipartite response regulators 61
PreATP-grasp domain Rudiment single hybrid motif 62
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 62
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 63
Sm-like ribonucleoproteins Mechanosensitive channel protein MscS (YggB), C-terminal domain 52
Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), C-terminal domain 52
Periplasmic binding protein-like II Nucleotide cyclase 55
ACT-like ACT-like 54
HMA, heavy metal-associated domain HAD-like 54
HAMP domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 54
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein S5 domain 2-like 55
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 54
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 52
Phospholipase D/nuclease Phospholipase D/nuclease 53
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 52
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 54
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 54
Composite domain of metallo-dependent hydrolases Metallo-dependent hydrolases 43
PurM N-terminal domain-like PurM C-terminal domain-like 42
CheY-like EAL domain-like 43
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 41
HAMP domain-like Homodimeric domain of signal transducing histidine kinase 43
Triger factor/SurA peptide-binding domain-like FKBP-like 44
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 44
Trypsin-like serine proteases PDZ domain-like 44
cAMP-binding domain-like "Winged helix" DNA-binding domain 41
GAF domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 44
GAF domain-like Nucleotide cyclase 43
Translation proteins EF-G C-terminal domain-like 43
Histidine-containing phosphotransfer domain, HPT domain CheY-like 44
Histidine-containing phosphotransfer domain, HPT domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 44
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 42
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 41
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Adenine nucleotide alpha hydrolases-like 41
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 43
DnaK suppressor protein DksA, alpha-hairpin domain Glucocorticoid receptor-like (DNA-binding domain) 41
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheY-like 44
HAMP domain-like PYP-like sensor domain (PAS domain) 43
Nucleotidyltransferase ACT-like 32
Thioredoxin-like Six-hairpin glycosidases 32
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 33
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 31
Homeodomain-like Ribonuclease H-like 32
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 33
PDZ domain-like PDZ domain-like 33
HAMP domain-like EAL domain-like 32
EF-G C-terminal domain-like EF-G C-terminal domain-like 32
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 32
HD-domain/PDEase-like Nucleotidyltransferase 32
Periplasmic binding protein-like II EAL domain-like 33
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 31
TPR-like TPR-like 33
Periplasmic binding protein-like II PYP-like sensor domain (PAS domain) 33
Cupredoxins Cupredoxins 33
Class II aaRS and biotin synthetases Class II aaRS ABD-related 33
HD-domain/PDEase-like ACT-like 32
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 31
Homodimeric domain of signal transducing histidine kinase CheY-like 33
TrkA C-terminal domain-like TrkA C-terminal domain-like 32
PLP-binding barrel Alanine racemase C-terminal domain-like 32
EspE N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 32
Thioredoxin-like GST C-terminal domain-like 31
GAF domain-like P-loop containing nucleoside triphosphate hydrolases 33
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 33
HMA, heavy metal-associated domain HMA, heavy metal-associated domain 32
HD-domain/PDEase-like GAF domain-like 32
Homodimeric domain of signal transducing histidine kinase Histidine-containing phosphotransfer domain, HPT domain 33
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 32
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 32
CheW-like CheY-like 32
P-loop containing nucleoside triphosphate hydrolases MOP-like 31
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 32
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 32
GroES-like NAD(P)-binding Rossmann-fold domains 31
Folate-binding domain Aminomethyltransferase beta-barrel domain 32
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 31
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 32
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 32
Alpha-L RNA-binding motif Pseudouridine synthase 31
MurCD N-terminal domain MurD-like peptide ligases, catalytic domain 31
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 33
MurCD N-terminal domain MurD-like peptide ligases, peptide-binding domain 31
(Trans)glycosidases Glycosyl hydrolase domain 22
Adenine nucleotide alpha hydrolases-like Adenine nucleotide alpha hydrolases-like 21
Nitrite/Sulfite reductase N-terminal domain-like 4Fe-4S ferredoxins 21
Nucleic acid-binding proteins RuvA domain 2-like 22
Nucleotidyltransferase Poly A polymerase C-terminal region-like 22
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 22
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 22
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 21
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 21
E set domains Glycosyl hydrolase domain 22
UROD/MetE-like UROD/MetE-like 21
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 22
2Fe-2S ferredoxin-like Ferredoxin reductase-like, C-terminal NADP-linked domain 21
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 21
Homeodomain-like Tetracyclin repressor-like, C-terminal domain 21
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheW-like 22
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
CBS-domain pair MgtE membrane domain-like 21
tRNA-binding arm Class II aaRS and biotin synthetases 21
cAMP-binding domain-like HD-domain/PDEase-like 21
E set domains (Trans)glycosidases 22
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 21
Sensory domain-like Methyl-accepting chemotaxis protein (MCP) signaling domain 22
"Winged helix" DNA-binding domain GAF domain-like 21
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 21
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 21
Metal cation-transporting ATPase, ATP-binding domain N Calcium ATPase, transmembrane domain M 21
NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains 22
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 21
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 21
Nucleic acid-binding proteins Nucleic acid-binding proteins 22
Formate dehydrogenase/DMSO reductase, domains 1-3 ADC-like 22
MgtE N-terminal domain-like CBS-domain pair 21
Calcium ATPase, transduction domain A Metal cation-transporting ATPase, ATP-binding domain N 21
alpha-helical ferredoxin Nucleotide-binding domain 22
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 22
DNA methylase specificity domain DNA methylase specificity domain 21
CheY-like CheY-like 22
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 21
4Fe-4S ferredoxins Nitrite and sulphite reductase 4Fe-4S domain-like 21
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 21
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 22
S13-like H2TH domain Glucocorticoid receptor-like (DNA-binding domain) 21
NAD(P)-binding Rossmann-fold domains ACT-like 22
GAF domain-like Homodimeric domain of signal transducing histidine kinase 22
GAF domain-like EAL domain-like 22
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 21
CBS-domain pair FAD-binding/transporter-associated domain-like 21
MgtE N-terminal domain-like MgtE membrane domain-like 21
MetI-like MetI-like 22
Single hybrid motif CoA-dependent acyltransferases 21
Metallo-dependent phosphatases 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain 21
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 22
Metal cation-transporting ATPase, ATP-binding domain N HAD-like 21
Nucleotidyltransferase TGS-like 21
Periplasmic binding protein-like II Lysozyme-like 22
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 22
P-loop containing nucleoside triphosphate hydrolases Restriction endonuclease-like 22
CheY-like PYP-like sensor domain (PAS domain) 22
2Fe-2S ferredoxin-like Riboflavin synthase domain-like 21
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 21
NAD(P)-binding Rossmann-fold domains UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 21
lambda repressor-like DNA-binding domains P-loop containing nucleoside triphosphate hydrolases 22
Lysozyme-like beta-lactamase/transpeptidase-like 22
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex CoA-dependent acyltransferases 21
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 21
ThrRS/AlaRS common domain Class II aaRS and biotin synthetases 22
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 21
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
Macro domain-like Zn-dependent exopeptidases 21
Penicillin binding protein dimerisation domain beta-lactamase/transpeptidase-like 21
Ribonuclease H-like mu transposase, C-terminal domain 22
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 22
Nucleotidyltransferase Nucleotidyltransferase substrate binding subunit/domain 22
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 21
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 22
Histidine-containing phosphotransfer domain, HPT domain CheW-like 22
6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 21
Single hybrid motif Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 21
TGS-like ACT-like 21
Succinyl-CoA synthetase domains Glutathione synthetase ATP-binding domain-like 22
Thioredoxin-like TPR-like 21
Nucleic acid-binding proteins Translation proteins SH3-like domain 22
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
Chaperone J-domain HSP40/DnaJ peptide-binding domain 22
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 22
Thiolase-like Thiolase-like 21
PYP-like sensor domain (PAS domain) Methyl-accepting chemotaxis protein (MCP) signaling domain 22
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 22
HD-domain/PDEase-like TGS-like 21
N-terminal domain of MutM-like DNA repair proteins Glucocorticoid receptor-like (DNA-binding domain) 21
Homeodomain-like Homeodomain-like 22
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 21
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 21
cAMP-binding domain-like CBS-domain pair 22
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 22
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain Alkaline phosphatase-like 11
Elongation factor Ts (EF-Ts), dimerisation domain Elongation factor Ts (EF-Ts), dimerisation domain 11
Nqo1 FMN-binding domain-like alpha-helical ferredoxin 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphoenolpyruvate/pyruvate domain 11
Smc hinge domain Tropomyosin 11
Dihydropteroate synthetase-like Methionine synthase activation domain-like 11
PIN domain-like Ribonuclease H-like 11
Cupredoxins Cytochrome c 11
EF-G C-terminal domain-like Ribosomal protein S5 domain 2-like 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
L9 N-domain-like Ribosomal protein L9 C-domain 11
PYP-like sensor domain (PAS domain) GAF domain-like 11
PheT/TilS domain Anticodon-binding domain of PheRS 11
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 11
RuvA domain 2-like JAB1/MPN domain 11
Ribonuclease H-like P-loop containing nucleoside triphosphate hydrolases 11
Nudix Thiamin phosphate synthase 11
5' to 3' exonuclease, C-terminal subdomain Ribonuclease H-like 11
Ribonuclease H-like HRDC-like 11
Trigger factor ribosome-binding domain FKBP-like 11
Nucleotidyltransferase substrate binding subunit/domain ACT-like 11
Nucleotide-binding domain 4Fe-4S ferredoxins 11
FGAM synthase PurL, linker domain PurM N-terminal domain-like 11
FAD-binding/transporter-associated domain-like alpha-helical ferredoxin 11
Translation proteins Initiation factor IF2/eIF5b, domain 3 11
PPK N-terminal domain-like Phospholipase D/nuclease 11
PUA domain-like S-adenosyl-L-methionine-dependent methyltransferases 11
Putative DNA-binding domain Ribonuclease H-like 11
Glutathione synthetase ATP-binding domain-like Cyclophilin-like 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
GAF domain-like Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 11
NAD(P)-binding Rossmann-fold domains Acyl-CoA N-acyltransferases (Nat) 11
Class II aaRS and biotin synthetases YbaK/ProRS associated domain 11
Homocysteine S-methyltransferase Cobalamin (vitamin B12)-binding domain 11
NAD(P)-binding Rossmann-fold domains Isocitrate/Isopropylmalate dehydrogenase-like 11
HCP-like HCP-like 11
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 11
Nucleic acid-binding proteins Prokaryotic type KH domain (KH-domain type II) 11
Methylglyoxal synthase-like Cytidine deaminase-like 11
ARM repeat ARM repeat 11
PurS-like Class I glutamine amidotransferase-like 11
beta-lactamase/transpeptidase-like Penicillin-binding protein associated domain 11
NAD(P)-binding Rossmann-fold domains Siroheme synthase middle domains-like 11
RuvA domain 2-like DNA helicase RuvA subunit, C-terminal domain 11
Prokaryotic type KH domain (KH-domain type II) Rad51 N-terminal domain-like 11
C-terminal UvrC-binding domain of UvrB RuvA domain 2-like 11
Methionine synthase domain Cobalamin (vitamin B12)-binding domain 11
GroEL equatorial domain-like GroEL apical domain-like 11
Cyclophilin-like Single hybrid motif 11
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 11
2Fe-2S ferredoxin-like 4Fe-4S ferredoxins 11
HprK N-terminal domain-like PEP carboxykinase-like 11
Protein kinase-like (PK-like) P-loop containing nucleoside triphosphate hydrolases 11
Pili subunits GspK insert domain-like 11
Transmembrane di-heme cytochromes a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 11
"Winged helix" DNA-binding domain Rhodanese/Cell cycle control phosphatase 11
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 11
Cyclophilin-like PH0987 N-terminal domain-like 11
Ribosomal protein L6 Ribosomal protein L6 11
Acylphosphatase/BLUF domain-like YrdC/RibB 11
lambda repressor-like DNA-binding domains LexA/Signal peptidase 11
Hsp33 domain HSP33 redox switch-like 11
P-loop containing nucleoside triphosphate hydrolases Adenine nucleotide alpha hydrolases-like 11
Rho N-terminal domain-like Nucleic acid-binding proteins 11
Transposase IS200-like TrpR-like 11
Nucleic acid-binding proteins S-adenosyl-L-methionine-dependent methyltransferases 11
Formyltransferase FMT C-terminal domain-like 11
Single hybrid motif FAD/NAD(P)-binding domain 11
Nucleotidylyl transferase Nucleic acid-binding proteins 11
Adenine nucleotide alpha hydrolases-like MesJ substrate recognition domain-like 11
EAL domain-like HD-domain/PDEase-like 11
Putative DNA-binding domain Homeodomain-like 11
Leukotriene A4 hydrolase N-terminal domain Metalloproteases ("zincins"), catalytic domain 11
Dihydropteroate synthetase-like Cobalamin (vitamin B12)-binding domain 11
Succinyl-CoA synthetase domains Succinyl-CoA synthetase domains 11
TGS-like ThrRS/AlaRS common domain 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
lambda repressor-like DNA-binding domains RmlC-like cupins 11
"Winged helix" DNA-binding domain MOP-like 11
Lysozyme-like LysM domain 11
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 11
P-loop containing nucleoside triphosphate hydrolases TGS-like 11
GroEL-intermediate domain like GroEL apical domain-like 11
Succinyl-CoA synthetase domains Acyl-CoA N-acyltransferases (Nat) 11
HMA, heavy metal-associated domain Cation efflux protein transmembrane domain-like 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
alpha-helical ferredoxin 4Fe-4S ferredoxins 11
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Ribbon-helix-helix ACT-like 11
Acyl-CoA N-acyltransferases (Nat) Carbon-nitrogen hydrolase 11
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 11
GAF domain-like Homeodomain-like 11
Nucleic acid-binding proteins Anticodon-binding domain of PheRS 11
FliG FliG 11
Aconitase iron-sulfur domain LeuD/IlvD-like 11
Carbon-nitrogen hydrolase Adenine nucleotide alpha hydrolases-like 11
Glutathione synthetase ATP-binding domain-like Single hybrid motif 11
Nucleic acid-binding proteins Rad51 N-terminal domain-like 11
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 11
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 11
Transcription factor NusA, N-terminal domain Prokaryotic type KH domain (KH-domain type II) 11
Rho N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain ACT-like 11
Thioredoxin-like Thioredoxin-like 11
Nitrous oxide reductase, N-terminal domain Cupredoxins 11
CheY-like HD-domain/PDEase-like 11
PreATP-grasp domain PreATP-grasp domain 11
Tryptophan synthase beta subunit-like PLP-dependent enzymes ACT-like 11
MoeA N-terminal region -like Molybdenum cofactor biosynthesis proteins 11
lambda repressor-like DNA-binding domains C-terminal domain of B transposition protein 11
Hedgehog/intein (Hint) domain PFL-like glycyl radical enzymes 11
PurM C-terminal domain-like Class I glutamine amidotransferase-like 11
4Fe-4S ferredoxins Formate dehydrogenase/DMSO reductase, domains 1-3 11
Putative DNA-binding domain mu transposase, C-terminal domain 11
Glutathione synthetase ATP-binding domain-like PH0987 N-terminal domain-like 11
Pseudouridine synthase PUA domain-like 11
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 11
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 11
PUA domain-like Nucleotidylyl transferase 11
HD-domain/PDEase-like HD-domain/PDEase-like 11
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 11
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Alpha subunit of glutamate synthase, C-terminal domain 11
GAF domain-like Phosphoenolpyruvate/pyruvate domain 11
Glutathione synthetase ATP-binding domain-like Acyl-CoA N-acyltransferases (Nat) 11
Sec-C motif NTF2-like 11
Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha) Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha) 11
Aminoacid dehydrogenase-like, N-terminal domain Isocitrate/Isopropylmalate dehydrogenase-like 11
NagB/RpiA/CoA transferase-like alpha-helical ferredoxin 11
GIY-YIG endonuclease C-terminal UvrC-binding domain of UvrB 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
TolB, N-terminal domain Tricorn protease N-terminal domain 11
Adenine nucleotide alpha hydrolases-like GAF domain-like 11
PurM N-terminal domain-like Class I glutamine amidotransferase-like 11
YrdC/RibB RibA-like 11
Cytochrome c oxidase subunit II-like, transmembrane region Cupredoxins 11
"Winged helix" DNA-binding domain GntR ligand-binding domain-like 11
DNA clamp DNA clamp 11
Adenine nucleotide alpha hydrolases-like PheT/TilS domain 11
Oxidoreductase molybdopterin-binding domain E set domains 11
Epsilon subunit of F1F0-ATP synthase N-terminal domain Epsilon subunit of F1F0-ATP synthase C-terminal domain 11
ClpP/crotonase NfeD domain-like 11
MesJ substrate recognition domain-like PheT/TilS domain 11
FKBP-like FKBP-like 11
PYP-like sensor domain (PAS domain) Homeodomain-like 11
Nqo1 FMN-binding domain-like Nqo1 middle domain-like 11
SMAD/FHA domain SMAD/FHA domain 11
GIY-YIG endonuclease RuvA domain 2-like 11
NAD(P)-binding Rossmann-fold domains TrkA C-terminal domain-like 11
Periplasmic binding protein-like II Periplasmic binding protein-like II 11
Nucleic acid-binding proteins PheT/TilS domain 11
Carbamate kinase-like Acyl-CoA N-acyltransferases (Nat) 11
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of B transposition protein 11
Glutamine synthetase/guanido kinase GatB/YqeY motif 11
PheT/TilS domain Putative DNA-binding domain 11
Chorismate mutase II Periplasmic binding protein-like II 11
Homocysteine S-methyltransferase Dihydropteroate synthetase-like 11
Carbamate kinase-like ACT-like 11
MOP-like MOP-like 11
PIN domain-like DNA/RNA polymerases 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
Class II aaRS and biotin synthetases GAD domain-like 11
Cytidine deaminase-like Dihydrofolate reductase-like 11
Restriction endonuclease-like RuvA domain 2-like 11
ACT-like Formyltransferase 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
CheC-like Surface presentation of antigens (SPOA) 11
Homodimeric domain of signal transducing histidine kinase CheW-like 11
Chaperone J-domain HSC20 (HSCB), C-terminal oligomerisation domain 11
Hedgehog/intein (Hint) domain Homing endonucleases 11
vWA-like TPR-like 11
HAMP domain-like GAF domain-like 11
ARM repeat Protein kinase-like (PK-like) 11
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 11
Bacterial fluorinating enzyme, N-terminal domain Bacterial fluorinating enzyme, C-terminal domain 11
Heme-dependent peroxidases Heme-dependent peroxidases 11
Eukaryotic type KH-domain (KH-domain type I) Nucleic acid-binding proteins 11
Ribonuclease H-like DNA/RNA polymerases 11
RuvA domain 2-like BRCT domain 11
FMN-dependent nitroreductase-like FMN-dependent nitroreductase-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
L,D-transpeptidase catalytic domain-like Sporulation related repeat 11
Formate/glycerate dehydrogenase catalytic domain-like ACT-like 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
PurS-like FGAM synthase PurL, linker domain 11
L30e-like alpha/beta knot 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
NAD(P)-binding Rossmann-fold domains Tetrapyrrole methylase 11
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 11
FMN-binding split barrel UbiD C-terminal domain-like 11
FGAM synthase PurL, linker domain PurM C-terminal domain-like 11
PDZ domain-like ClpP/crotonase 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
GreA transcript cleavage protein, N-terminal domain FKBP-like 11
TGS-like Class II aaRS ABD-related 11
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 11
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 11
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 11
Galactose mutarotase-like E set domains 11
Nucleotide-diphospho-sugar transferases RmlC-like cupins 11
Barwin-like endoglucanases Sporulation related repeat 11
MoeA N-terminal region -like MoeA C-terminal domain-like 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
Riboflavin synthase domain-like Riboflavin synthase domain-like 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
RuBisCO, large subunit, small (N-terminal) domain RuBisCo, C-terminal domain 11
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 11
Homeodomain-like mu transposase, C-terminal domain 11
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 11
Glutathione synthetase ATP-binding domain-like Phosphoenolpyruvate/pyruvate domain 11
2Fe-2S ferredoxin-like alpha-helical ferredoxin 11
Glucocorticoid receptor-like (DNA-binding domain) P-loop containing nucleoside triphosphate hydrolases 11
R1 subunit of ribonucleotide reductase, N-terminal domain PFL-like glycyl radical enzymes 11
Prokaryotic type KH domain (KH-domain type II) Prokaryotic type KH domain (KH-domain type II) 11
Putative DNA-binding domain Translation proteins 11
Transcription factor NusA, N-terminal domain Rad51 N-terminal domain-like 11
Putative DNA-binding domain Initiation factor IF2/eIF5b, domain 3 11
Siroheme synthase middle domains-like Tetrapyrrole methylase 11
PreATP-grasp domain PH0987 N-terminal domain-like 11
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 11
Methionine synthase domain Methionine synthase activation domain-like 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
Aldolase Single hybrid motif 11
UDP-Glycosyltransferase/glycogen phosphorylase HAD-like 11
YbaK/ProRS associated domain Class II aaRS ABD-related 11
2Fe-2S ferredoxin-like ADC-like 11
Chemotaxis receptor methyltransferase CheR, N-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 11
PreATP-grasp domain Cyclophilin-like 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
Chorismate mutase II ACT-like 11
Rad51 N-terminal domain-like Rad51 N-terminal domain-like 11
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 11
post-HMGL domain-like Single hybrid motif 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 11
alpha/beta-Hydrolases Thioredoxin-like 11
P-loop containing nucleoside triphosphate hydrolases TrpR-like 11
"Winged helix" DNA-binding domain Chorismate lyase-like 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleotidylyl transferase 11
Molybdenum cofactor biosynthesis proteins MoeA C-terminal domain-like 11
CheY-like Methylesterase CheB, C-terminal domain 11
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 11
TPR-like Protein kinase-like (PK-like) 11
Nucleic acid-binding proteins GAD domain-like 11
FAD/NAD(P)-binding domain Aminomethyltransferase beta-barrel domain 11
FMN-linked oxidoreductases Alpha subunit of glutamate synthase, C-terminal domain 11
FAD-binding/transporter-associated domain-like Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain 11
TGS-like Class II aaRS and biotin synthetases 11
P-loop containing nucleoside triphosphate hydrolases C-terminal UvrC-binding domain of UvrB 11
Glutamyl tRNA-reductase catalytic, N-terminal domain Glutamyl tRNA-reductase dimerization domain 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
Fe-S cluster assembly (FSCA) domain-like P-loop containing nucleoside triphosphate hydrolases 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleic acid-binding proteins 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Nucleic acid-binding proteins 11
Prokaryotic type I DNA topoisomerase Zinc beta-ribbon 11
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 11
Translation proteins Ribosomal protein S5 domain 2-like 11
Histidine-containing phosphotransfer domain, HPT domain Histidine-containing phosphotransfer domain, HPT domain 11
DPP6 N-terminal domain-like Multiheme cytochromes 11
Actin-like ATPase domain HD-domain/PDEase-like 11
Translation proteins Translation proteins 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FMN-linked oxidoreductases 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
5' to 3' exonuclease, C-terminal subdomain DNA/RNA polymerases 11
Nqo1 middle domain-like Nqo1C-terminal domain-like 11
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 11
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 11
PH0987 N-terminal domain-like Single hybrid motif 11
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 11
Class I glutamine amidotransferase-like Homeodomain-like 11
Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 11
Acyl-CoA N-acyltransferases (Nat) Acyl-CoA N-acyltransferases (Nat) 11
YjeF N-terminal domain-like Ribokinase-like 11
PreATP-grasp domain Single hybrid motif 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
GroEL equatorial domain-like GroEL-intermediate domain like 11
Nucleotidylyl transferase Riboflavin kinase-like 11
Translation proteins ThrRS/AlaRS common domain 11
FGAM synthase PurL, linker domain Class I glutamine amidotransferase-like 11
PheT/TilS domain Class II aaRS and biotin synthetases 11
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 11
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 11
PUA domain-like Ribosomal protein S5 domain 2-like 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 11
PPK N-terminal domain-like PHP14-like 11
P-loop containing nucleoside triphosphate hydrolases Homodimeric domain of signal transducing histidine kinase 11
P-loop containing nucleoside triphosphate hydrolases Smc hinge domain 11
FKBP-like Rhodanese/Cell cycle control phosphatase 11
WD40 repeat-like MetI-like 11
PUA domain-like alpha/beta knot 11
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
GAF domain-like Phosphohistidine domain 11
Nucleotidyltransferase substrate binding subunit/domain HD-domain/PDEase-like 11
P-loop containing nucleoside triphosphate hydrolases HRDC-like 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
all-alpha NTP pyrophosphatases all-alpha NTP pyrophosphatases 11
Single hybrid motif FAD/NAD-linked reductases, dimerisation (C-terminal) domain 11
Nqo1 FMN-binding domain-like Nqo1C-terminal domain-like 11
LysM domain LysM domain 11
P-loop containing nucleoside triphosphate hydrolases ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Adenine nucleotide alpha hydrolases-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
TrmE connector domain P-loop containing nucleoside triphosphate hydrolases 11
DNA-glycosylase Nudix 11
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 11
DsbC/DsbG N-terminal domain-like Thioredoxin-like 11
NAD(P)-binding Rossmann-fold domains Glutamyl tRNA-reductase dimerization domain 11
E set domains E set domains 11
Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha) Thioredoxin-like 11
2Fe-2S ferredoxin-like Formate dehydrogenase/DMSO reductase, domains 1-3 11
Homing endonucleases PFL-like glycyl radical enzymes 11
Glutamyl tRNA-reductase catalytic, N-terminal domain NAD(P)-binding Rossmann-fold domains 11
NagB/RpiA/CoA transferase-like D-ribose-5-phosphate isomerase (RpiA), lid domain 11
Rudiment single hybrid motif PH0987 N-terminal domain-like 11
Putative DNA-binding domain Anticodon-binding domain of PheRS 11
P-loop containing nucleoside triphosphate hydrolases HD-domain/PDEase-like 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
DNA ligase/mRNA capping enzyme, catalytic domain RuvA domain 2-like 11
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
EPT/RTPC-like RNA 3'-terminal phosphate cyclase, RPTC, insert domain 11
Nucleic acid-binding proteins DNA helicase RuvA subunit, C-terminal domain 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
Cytochrome c oxidase subunit II-like, transmembrane region Cytochrome c 11
P-loop containing nucleoside triphosphate hydrolases CarD-like 11
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 11
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 11
Translation proteins PRC-barrel domain 11
PurS-like PurM C-terminal domain-like 11
CheY-like CheC-like 11
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 11
ParB/Sulfiredoxin KorB DNA-binding domain-like 11
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 11
Putative DNA-binding domain P-loop containing nucleoside triphosphate hydrolases 11
Cobalamin (vitamin B12)-binding domain Methionine synthase activation domain-like 11
YajQ-like YajQ-like 11
4Fe-4S ferredoxins ADC-like 11
FAD-linked oxidases, C-terminal domain alpha-helical ferredoxin 11
NAD(P)-binding Rossmann-fold domains Glutathione synthetase ATP-binding domain-like 11
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 11
Methyl-accepting chemotaxis protein (MCP) signaling domain Periplasmic binding protein-like II 11
PYP-like sensor domain (PAS domain) P-loop containing nucleoside triphosphate hydrolases 11
Rudiment single hybrid motif Single hybrid motif 11
Enolase N-terminal domain-like Enolase C-terminal domain-like 11
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 11
Nucleic acid-binding proteins BRCT domain 11
Transcription factor NusA, N-terminal domain Nucleic acid-binding proteins 11
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 11
FAD/NAD(P)-binding domain Folate-binding domain 11
Carbamate kinase-like PUA domain-like 11
PurS-like PurM N-terminal domain-like 11
"Winged helix" DNA-binding domain LexA/Signal peptidase 11
RBP11-like subunits of RNA polymerase C-terminal domain of RNA polymerase alpha subunit 11
N-terminal domain of DnaB helicase P-loop containing nucleoside triphosphate hydrolases 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
Periplasmic binding protein-like II ACT-like 11
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 11
Dihydropteroate synthetase-like Methionine synthase domain 11
Cyclophilin-like Cyclophilin-like 11
FAD-linked oxidases, C-terminal domain FAD-linked oxidases, C-terminal domain 11
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 11
Class II aaRS and biotin synthetases Translation proteins 11
HRDC-like HRDC-like 11
Methylated DNA-protein cysteine methyltransferase domain Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
Ribosomal protein S5 domain 2-like HSP90 C-terminal domain 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase HSP90 C-terminal domain 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphohistidine domain 11
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 11
Bacteriophage trimeric proteins domain C-type lectin-like 11
PreATP-grasp domain Methylglyoxal synthase-like 11
P-loop containing nucleoside triphosphate hydrolases SMAD/FHA domain 11
"Winged helix" DNA-binding domain S-adenosyl-L-methionine-dependent methyltransferases 11
C-terminal effector domain of the bipartite response regulators TPR-like 11
Nucleotidylyl transferase tRNA-binding arm 11
PIN domain-like P-loop containing nucleoside triphosphate hydrolases 11
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 11
CarD-like TRCF domain-like 11
Ribosome binding protein Y (YfiA homologue) Nucleic acid-binding proteins 11
Adenine nucleotide alpha hydrolases-like Homodimeric domain of signal transducing histidine kinase 11
HAMP domain-like CheY-like 11
DinB/YfiT-like putative metalloenzymes C-type lectin-like 11
Tropomyosin OmpA-like 11
Aldolase post-HMGL domain-like 11
PHP14-like Phospholipase D/nuclease 11
RmlC-like cupins RmlC-like cupins 11
Nucleotide cyclase Nucleotide cyclase 11
YhbC-like, N-terminal domain YhbC-like, C-terminal domain 11
Urease metallochaperone UreE, N-terminal domain Urease metallochaperone UreE, C-terminal domain 11
Nucleotidyltransferase Nucleotidyltransferase 11
Homocysteine S-methyltransferase Methionine synthase activation domain-like 11
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 11
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 11
HlyD-like secretion proteins HlyD-like secretion proteins 11
PK beta-barrel domain-like PK C-terminal domain-like 11
Rudiment single hybrid motif Cyclophilin-like 11
Nucleotidyltransferase substrate binding subunit/domain Nucleotidyltransferase substrate binding subunit/domain 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 11
Zn-dependent exopeptidases LysM domain 11
P-loop containing nucleoside triphosphate hydrolases Tropomyosin 11
Cryptochrome/photolyase, N-terminal domain Cryptochrome/photolyase FAD-binding domain 11
Nucleic acid-binding proteins Putative DNA-binding domain 11
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 11
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 11
HAMP domain-like Histidine-containing phosphotransfer domain, HPT domain 11
Homocysteine S-methyltransferase Methionine synthase domain 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
RNase III domain-like dsRNA-binding domain-like 11
Homo-oligomeric flavin-containing Cys decarboxylases, HFCD CoaB-like 11

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