SUPERFAMILY 1.75 HMM library and genome assignments server

Domain combination pairs in Geobacter uraniireducens Rf4

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

  • For a list of unique full length architectures for this genome click here (can be slow).
Adjacent domain pairs graph

Graph of adjacent domain pairs.


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Domain combination pairs

827 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 8145
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 4731
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 4327
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 399
CheY-like Homeodomain-like 334
CheY-like P-loop containing nucleoside triphosphate hydrolases 323
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 3014
Multiheme cytochromes Multiheme cytochromes 2818
PYP-like sensor domain (PAS domain) PYP-like sensor domain (PAS domain) 2621
HAMP domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 208
HAMP domain-like Homodimeric domain of signal transducing histidine kinase 208
CheY-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 1917
CheY-like PYP-like sensor domain (PAS domain) 1816
CheY-like Homodimeric domain of signal transducing histidine kinase 1816
Actin-like ATPase domain Actin-like ATPase domain 156
GAF domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 1413
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 137
Thiolase-like Thiolase-like 136
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 135
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 124
Sensory domain-like Homodimeric domain of signal transducing histidine kinase 126
Sensory domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 126
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 113
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 116
HAMP domain-like PYP-like sensor domain (PAS domain) 118
P-loop containing nucleoside triphosphate hydrolases Translation proteins 118
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB transmembrane domain 116
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 116
GAF domain-like Homodimeric domain of signal transducing histidine kinase 1111
TPR-like TPR-like 106
Sensory domain-like HAMP domain-like 105
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 105
CheY-like C-terminal effector domain of the bipartite response regulators 101
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 106
PYP-like sensor domain (PAS domain) GAF domain-like 99
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 95
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein S5 domain 2-like 97
Chemotaxis receptor methyltransferase CheR, N-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 92
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 94
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 85
CheY-like GAF domain-like 88
Methyl-accepting chemotaxis protein (MCP) signaling domain Methyl-accepting chemotaxis protein (MCP) signaling domain 84
Fibronectin type III Fibronectin type III 88
Transposase IS200-like TrpR-like 81
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 83
Formate dehydrogenase/DMSO reductase, domains 1-3 ADC-like 83
FKBP-like Triger factor/SurA peptide-binding domain-like 75
CheY-like Nucleotide cyclase 75
Histidine-containing phosphotransfer domain, HPT domain CheW-like 74
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 72
Homodimeric domain of signal transducing histidine kinase CheW-like 74
Histidine-containing phosphotransfer domain, HPT domain Homodimeric domain of signal transducing histidine kinase 74
Histidine-containing phosphotransfer domain, HPT domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 74
Homeodomain-like Ribonuclease H-like 71
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheW-like 74
Homeodomain-like Tetracyclin repressor-like, C-terminal domain 61
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 64
"Winged helix" DNA-binding domain GAF domain-like 61
Cobalamin (vitamin B12)-binding domain Radical SAM enzymes 63
DNA methylase specificity domain DNA methylase specificity domain 61
Thiolase-like ACP-like 65
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 65
"Winged helix" DNA-binding domain Periplasmic binding protein-like II 61
CheY-like Methylesterase CheB, C-terminal domain 61
Homeodomain-like Homeodomain-like 65
Nucleic acid-binding proteins Nucleic acid-binding proteins 54
Rhodanese/Cell cycle control phosphatase Rhodanese/Cell cycle control phosphatase 54
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 54
Translation proteins EF-G C-terminal domain-like 53
Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase C-terminal domain-like 52
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 53
PreATP-grasp domain Rudiment single hybrid motif 53
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 52
PYP-like sensor domain (PAS domain) Nucleotide cyclase 54
Aldehyde ferredoxin oxidoreductase, N-terminal domain Aldehyde ferredoxin oxidoreductase, C-terminal domains 51
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 53
PurM N-terminal domain-like PurM C-terminal domain-like 52
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 53
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 52
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 54
Adenine nucleotide alpha hydrolases-like DHS-like NAD/FAD-binding domain 52
EspE N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 53
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 54
ACT-like ACT-like 53
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 54
EF-G C-terminal domain-like EF-G C-terminal domain-like 53
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 52
GAF domain-like GAF domain-like 55
NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains 55
GroES-like NAD(P)-binding Rossmann-fold domains 51
PLP-binding barrel Alanine racemase C-terminal domain-like 42
lambda repressor-like DNA-binding domains RmlC-like cupins 41
Cadherin-like Cadherin-like 44
GAF domain-like P-loop containing nucleoside triphosphate hydrolases 44
Invasin/intimin cell-adhesion fragments Invasin/intimin cell-adhesion fragments 44
Nucleotidyltransferase Poly A polymerase C-terminal region-like 44
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 42
Thiolase-like NAD(P)-binding Rossmann-fold domains 44
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex CoA-dependent acyltransferases 41
Class II aaRS and biotin synthetases Class II aaRS ABD-related 43
Oligoxyloglucan reducing end-specific cellobiohydrolase Oligoxyloglucan reducing end-specific cellobiohydrolase 44
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 41
Calcium ATPase, transduction domain A HAD-like 42
NAD(P)-binding Rossmann-fold domains ACP-like 44
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 42
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 44
Single hybrid motif Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 41
GAF domain-like HD-domain/PDEase-like 44
HAD-like Calcium ATPase, transmembrane domain M 42
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 42
P-loop containing nucleoside triphosphate hydrolases MOP-like 41
Glutathione synthetase ATP-binding domain-like Succinyl-CoA synthetase domains 41
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 43
Respiratory nitrate reductase 1 gamma chain alpha-helical ferredoxin 41
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 42
Single hybrid motif CoA-dependent acyltransferases 41
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 43
Sm-like ribonucleoproteins Mechanosensitive channel protein MscS (YggB), C-terminal domain 33
CheY-like HD-domain/PDEase-like 32
HlyD-like secretion proteins HlyD-like secretion proteins 32
Nucleic acid-binding proteins RuvA domain 2-like 33
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 32
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 33
HAMP domain-like HD-domain/PDEase-like 33
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 33
HAMP domain-like Methyl-accepting chemotaxis protein (MCP) signaling domain 33
Metal cation-transporting ATPase, ATP-binding domain N Calcium ATPase, transmembrane domain M 31
PUA domain-like Ribosomal protein S5 domain 2-like 33
HCP-like HCP-like 33
"Winged helix" DNA-binding domain GntR ligand-binding domain-like 31
Nucleic acid-binding proteins Translation proteins SH3-like domain 32
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 33
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 33
GAF domain-like Nucleotide cyclase 33
2Fe-2S ferredoxin-like Formate dehydrogenase/DMSO reductase, domains 1-3 32
alpha-helical ferredoxin Nucleotide-binding domain 33
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 33
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 32
PKD domain Multiheme cytochromes 32
EspE N-terminal domain-like CheY-like 32
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 32
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 32
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 32
Cytochrome c Cytochrome c 33
Molybdenum cofactor biosynthesis proteins MoeA C-terminal domain-like 31
Translation proteins Ribosomal protein S5 domain 2-like 31
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 32
ACP-like ACP-like 33
2Fe-2S ferredoxin-like 4Fe-4S ferredoxins 32
EF-G C-terminal domain-like Ribosomal protein S5 domain 2-like 31
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 32
Calcium ATPase, transduction domain A Metal cation-transporting ATPase, ATP-binding domain N 31
FMN-binding split barrel UbiD C-terminal domain-like 32
4Fe-4S ferredoxins Formate dehydrogenase/DMSO reductase, domains 1-3 32
Metal cation-transporting ATPase, ATP-binding domain N HAD-like 31
PDZ domain-like ClpP/crotonase 31
Glutathione synthetase ATP-binding domain-like Single hybrid motif 32
MoeA N-terminal region -like Molybdenum cofactor biosynthesis proteins 31
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 33
MoeA N-terminal region -like MoeA C-terminal domain-like 31
PreATP-grasp domain Single hybrid motif 32
Rudiment single hybrid motif Single hybrid motif 32
Alpha-L RNA-binding motif Pseudouridine synthase 31
NAD(P)-binding Rossmann-fold domains ACT-like 32
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 31
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 33
Nqo5-like HydB/Nqo4-like 22
Nqo1 FMN-binding domain-like Nqo1C-terminal domain-like 22
Fibronectin type III Pectin lyase-like 22
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 21
tRNA-binding arm Class II aaRS and biotin synthetases 21
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphohistidine domain 22
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 21
Starch-binding domain-like Starch-binding domain-like 22
"Winged helix" DNA-binding domain S-adenosyl-L-methionine-dependent methyltransferases 21
Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), C-terminal domain 22
FMN-linked oxidoreductases FAD/NAD(P)-binding domain 22
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 22
NAD(P)-binding Rossmann-fold domains Serine metabolism enzymes domain 21
Integrin alpha N-terminal domain Integrin alpha N-terminal domain 22
Formate/glycerate dehydrogenase catalytic domain-like Serine metabolism enzymes domain 21
Thiamin diphosphate-binding fold (THDP-binding) 4Fe-4S ferredoxins 21
Aminoacid dehydrogenase-like, N-terminal domain Isocitrate/Isopropylmalate dehydrogenase-like 21
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 22
TK C-terminal domain-like 4Fe-4S ferredoxins 21
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 21
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 22
NAD(P)-binding Rossmann-fold domains UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 21
Composite domain of metallo-dependent hydrolases Metallo-dependent hydrolases 22
NAD(P)-binding Rossmann-fold domains Isocitrate/Isopropylmalate dehydrogenase-like 21
TK C-terminal domain-like Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 21
Chaperone J-domain HSP40/DnaJ peptide-binding domain 22
Ferritin-like Rubredoxin-like 21
OmpA-like OmpA-like 22
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 22
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphoenolpyruvate/pyruvate domain 22
PYP-like sensor domain (PAS domain) PP2C-like 22
GAF domain-like Homeodomain-like 22
Thiolase-like FabD/lysophospholipase-like 22
4'-phosphopantetheinyl transferase 4'-phosphopantetheinyl transferase 22
TTHA1013/TTHA0281-like Ribbon-helix-helix 21
4Fe-4S ferredoxins Adenine nucleotide alpha hydrolases-like 21
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 22
R1 subunit of ribonucleotide reductase, N-terminal domain PFL-like glycyl radical enzymes 22
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 21
Phospholipase D/nuclease Phospholipase D/nuclease 22
CBS-domain pair DHH phosphoesterases 22
Pentapeptide repeat-like Pentapeptide repeat-like 22
Cytochrome c Multiheme cytochromes 22
P-loop containing nucleoside triphosphate hydrolases TPR-like 22
Periplasmic binding protein-like II Homodimeric domain of signal transducing histidine kinase 21
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 21
Nucleotidyltransferase Nucleotidyltransferase substrate binding subunit/domain 22
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Adenine nucleotide alpha hydrolases-like 21
Concanavalin A-like lectins/glucanases Concanavalin A-like lectins/glucanases 22
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 22
Calcium-dependent phosphotriesterase Type I dockerin domain 21
Glutathione synthetase ATP-binding domain-like Phosphoenolpyruvate/pyruvate domain 22
Formate/glycerate dehydrogenase catalytic domain-like ACT-like 21
HAMP domain-like GAF domain-like 22
Flavoproteins 4Fe-4S ferredoxins 21
MurCD N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 4Fe-4S ferredoxins 21
Periplasmic binding protein-like II ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 21
Sensory domain-like PYP-like sensor domain (PAS domain) 22
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 22
PDZ domain-like PDZ domain-like 22
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 21
PYP-like sensor domain (PAS domain) Methyl-accepting chemotaxis protein (MCP) signaling domain 22
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 21
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
GreA transcript cleavage protein, N-terminal domain FKBP-like 21
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 21
Class II aaRS and biotin synthetases ThrRS/AlaRS common domain 22
Thioesterase/thiol ester dehydrase-isomerase Thioesterase/thiol ester dehydrase-isomerase 22
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 22
Nucleic acid-binding proteins S-adenosyl-L-methionine-dependent methyltransferases 21
Formyltransferase FMT C-terminal domain-like 21
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 21
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 22
Nqo1 FMN-binding domain-like Nqo1 middle domain-like 22
P-loop containing nucleoside triphosphate hydrolases C-terminal effector domain of the bipartite response regulators 22
CheY-like TPR-like 22
Serine metabolism enzymes domain ACT-like 21
Sensory domain-like Methyl-accepting chemotaxis protein (MCP) signaling domain 22
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 21
5' to 3' exonuclease, C-terminal subdomain Ribonuclease H-like 22
Lysozyme-like beta-lactamase/transpeptidase-like 22
LeuD/IlvD-like Aconitase iron-sulfur domain 22
Homeodomain-like Probable bacterial effector-binding domain 21
4Fe-4S ferredoxins ADC-like 21
6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 21
FKBP-like FKBP-like 22
Fibronectin type III NHL repeat 22
MurCD N-terminal domain MurD-like peptide ligases, catalytic domain 21
P-loop containing nucleoside triphosphate hydrolases HprK N-terminal domain-like 21
Penicillin binding protein dimerisation domain beta-lactamase/transpeptidase-like 22
TPR-like C-terminal effector domain of the bipartite response regulators 22
ClpP/crotonase ClpP/crotonase 21
Calcium-dependent phosphotriesterase Fibronectin type III 22
Nqo1 middle domain-like Nqo1C-terminal domain-like 22
CBS-domain pair FAD-binding/transporter-associated domain-like 21
PEP carboxykinase N-terminal domain PEP carboxykinase-like 21
cAMP-binding domain-like "Winged helix" DNA-binding domain 21
Acyl-CoA N-acyltransferases (Nat) Acyl-CoA N-acyltransferases (Nat) 21
Fibronectin type III Type I dockerin domain 22
Thiamin diphosphate-binding fold (THDP-binding) Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 21
2Fe-2S ferredoxin-like ADC-like 21
PIN domain-like Ribonuclease H-like 22
FAD/NAD(P)-binding domain 4Fe-4S ferredoxins 21
NagB/RpiA/CoA transferase-like NagB/RpiA/CoA transferase-like 21
Subtilisin-like Cadherin-like 22
Nucleotidyltransferase ACT-like 22
Trypsin-like serine proteases PDZ domain-like 22
Ribonuclease H-like DNA/RNA polymerases 22
HAMP domain-like CheY-like 22
DsbC/DsbG N-terminal domain-like Thioredoxin-like 22
PK beta-barrel domain-like PK C-terminal domain-like 21
LysM domain LysM domain 22
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 22
Carboxypeptidase regulatory domain-like Carboxypeptidase regulatory domain-like 22
Cytidine deaminase-like Nucleotide-diphospho-sugar transferases 21
CheY-like PilZ domain-like 21
RuvA domain 2-like RuvA domain 2-like 22
DnaK suppressor protein DksA, alpha-hairpin domain Glucocorticoid receptor-like (DNA-binding domain) 21
P-loop containing nucleoside triphosphate hydrolases Restriction endonuclease-like 22
CheW-like CheY-like 22
4Fe-4S ferredoxins DHS-like NAD/FAD-binding domain 21
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 22
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 22
E set domains E set domains 22
P-loop containing nucleoside triphosphate hydrolases C-terminal UvrC-binding domain of UvrB 11
Nucleotide-diphospho-sugar transferases Phosphoglucomutase, first 3 domains 11
Aldolase post-HMGL domain-like 11
FabD/lysophospholipase-like Inosine monophosphate dehydrogenase (IMPDH) 11
FAD-linked oxidoreductase ALDH-like 11
Cna protein B-type domain 3-carboxy-cis,cis-mucoante lactonizing enzyme 11
Sec63 N-terminal domain-like Nucleotidyltransferase 11
Pectin lyase-like Type I dockerin domain 11
"Winged helix" DNA-binding domain C-terminal domain of transcriptional repressors 11
PheT/TilS domain Putative DNA-binding domain 11
RBP11-like subunits of RNA polymerase C-terminal domain of RNA polymerase alpha subunit 11
TPR-like Sec-C motif 11
FMN-linked oxidoreductases Nucleotide-binding domain 11
6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 11
Nucleic acid-binding proteins Putative DNA-binding domain 11
Lysozyme-like LysM domain 11
Sporulation related repeat Cysteine proteinases 11
Nqo1C-terminal domain-like alpha-helical ferredoxin 11
Calcium-dependent phosphotriesterase NHL repeat 11
Thioredoxin-like Nqo1 FMN-binding domain-like 11
Fe-only hydrogenase Homeodomain-like 11
P-loop containing nucleoside triphosphate hydrolases Hypothetical protein YjiA, C-terminal domain 11
Hsp33 domain HSP33 redox switch-like 11
N-terminal domain of MutM-like DNA repair proteins Glucocorticoid receptor-like (DNA-binding domain) 11
Invasin/intimin cell-adhesion fragments C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase 11
Class I glutamine amidotransferase-like Homeodomain-like 11
HydA/Nqo6-like HydB/Nqo4-like 11
Quinoprotein alcohol dehydrogenase-like Galactose oxidase, central domain 11
Nucleotidyltransferase PHP domain-like 11
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 11
P-loop containing nucleoside triphosphate hydrolases TrpR-like 11
Putative DNA-binding domain Phoshotransferase/anion transport protein 11
Cation efflux protein cytoplasmic domain-like Nitrogenase accessory factor-like 11
Triger factor/SurA peptide-binding domain-like Triger factor/SurA peptide-binding domain-like 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
Protein kinase-like (PK-like) P-loop containing nucleoside triphosphate hydrolases 11
Subtilisin-like NHL repeat 11
Nucleic acid-binding proteins Prokaryotic type KH domain (KH-domain type II) 11
Prokaryotic type KH domain (KH-domain type II) Prokaryotic type KH domain (KH-domain type II) 11
Riboflavin synthase domain-like Riboflavin synthase domain-like 11
Rho N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
Eukaryotic type KH-domain (KH-domain type I) Nucleic acid-binding proteins 11
Cupredoxins Cytochrome c 11
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 11
DNA ligase/mRNA capping enzyme, catalytic domain RuvA domain 2-like 11
Thioredoxin-like Nqo1 middle domain-like 11
YlxR-like L30e-like 11
E set domains Pectin lyase-like 11
"Helical backbone" metal receptor "Helical backbone" metal receptor 11
"Winged helix" DNA-binding domain LexA/Signal peptidase 11
Diaminopimelate epimerase-like Diaminopimelate epimerase-like 11
RuvA domain 2-like BRCT domain 11
Class II aaRS and biotin synthetases GAD domain-like 11
HprK N-terminal domain-like PEP carboxykinase-like 11
DHH phosphoesterases Nucleotidyltransferase 11
Calcium-dependent phosphotriesterase Concanavalin A-like lectins/glucanases 11
Tetrapyrrole methylase S-adenosyl-L-methionine-dependent methyltransferases 11
Fibronectin type III Concanavalin A-like lectins/glucanases 11
CheC-like CheY-like 11
Thiolase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 11
NAD(P)-binding Rossmann-fold domains RmlC-like cupins 11
YrdC/RibB Actin-like ATPase domain 11
P-loop containing nucleoside triphosphate hydrolases CarD-like 11
TPR-like HCP-like 11
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 11
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
beta-Roll beta-Roll 11
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 11
GroEL equatorial domain-like GroEL apical domain-like 11
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 11
Nucleotide-diphospho-sugar transferases HD-domain/PDEase-like 11
Sensory domain-like HD-domain/PDEase-like 11
Transmembrane di-heme cytochromes a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
Tetrapyrrole methylase P-loop containing nucleoside triphosphate hydrolases 11
TolB, N-terminal domain Tricorn protease N-terminal domain 11
Folate-binding domain Aminomethyltransferase beta-barrel domain 11
CBS-domain pair Nucleotidyltransferase 11
Fibronectin type III Cytochrome c 11
"Winged helix" DNA-binding domain GIY-YIG endonuclease 11
RCC1/BLIP-II Carboxypeptidase regulatory domain-like 11
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 11
Chaperone J-domain TPR-like 11
NAD(P)-binding Rossmann-fold domains ClpP/crotonase 11
PreATP-grasp domain Methylglyoxal synthase-like 11
Voltage-gated potassium channels NAD(P)-binding Rossmann-fold domains 11
Invasin/intimin cell-adhesion fragments Pectin lyase-like 11
2Fe-2S ferredoxin-like CO dehydrogenase molybdoprotein N-domain-like 11
Homo-oligomeric flavin-containing Cys decarboxylases, HFCD CoaB-like 11
Tetrapyrrole methylase Class I glutamine amidotransferase-like 11
Ribosomal protein L6 Ribosomal protein L6 11
P-loop containing nucleoside triphosphate hydrolases Smc hinge domain 11
Probable ACP-binding domain of malonyl-CoA ACP transacylase Inosine monophosphate dehydrogenase (IMPDH) 11
PKD domain PKD domain 11
Nucleotidylyl transferase Riboflavin kinase-like 11
RuvA domain 2-like JAB1/MPN domain 11
Adenine nucleotide alpha hydrolases-like MesJ substrate recognition domain-like 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 11
PurS-like PurM C-terminal domain-like 11
PUA domain-like S-adenosyl-L-methionine-dependent methyltransferases 11
C-terminal UvrC-binding domain of UvrB RuvA domain 2-like 11
NAD(P)-binding Rossmann-fold domains TrkA C-terminal domain-like 11
Cysteine proteinases alpha/beta-Hydrolases 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Alpha subunit of glutamate synthase, C-terminal domain 11
PheT/TilS domain Anticodon-binding domain of PheRS 11
Thioredoxin-like Nqo1C-terminal domain-like 11
HD-domain/PDEase-like ACT-like 11
HIT-like HIT-like 11
NagB/RpiA/CoA transferase-like alpha-helical ferredoxin 11
GAF domain-like Phosphohistidine domain 11
Nitrite/Sulfite reductase N-terminal domain-like 4Fe-4S ferredoxins 11
Tex N-terminal region-like Nucleic acid-binding proteins 11
Quinoprotein alcohol dehydrogenase-like NHL repeat 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
PilZ domain-like P-loop containing nucleoside triphosphate hydrolases 11
Aminopeptidase/glucanase lid domain Zn-dependent exopeptidases 11
Galactose mutarotase-like Galactose mutarotase-like 11
Aspartate/glutamate racemase Aspartate/glutamate racemase 11
4Fe-4S ferredoxins Nitrite and sulphite reductase 4Fe-4S domain-like 11
MgtE N-terminal domain-like CBS-domain pair 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
Glucocorticoid receptor-like (DNA-binding domain) P-loop containing nucleoside triphosphate hydrolases 11
MOP-like MOP-like 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Nucleic acid-binding proteins 11
P-loop containing nucleoside triphosphate hydrolases HRDC-like 11
Rho N-terminal domain-like Nucleic acid-binding proteins 11
Methionine synthase domain Cobalamin (vitamin B12)-binding domain 11
E set domains (Trans)glycosidases 11
Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases 11
Quinoprotein alcohol dehydrogenase-like Fibronectin type III 11
PHP domain-like UDP-Glycosyltransferase/glycogen phosphorylase 11
EspE N-terminal domain-like CheW-like 11
ICP-like YdhA-like 11
MetI-like MetI-like 11
CheY-like EAL domain-like 11
Translation proteins PRC-barrel domain 11
EAL domain-like HD-domain/PDEase-like 11
Fibronectin type III Galactose oxidase, central domain 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
Dihydropteroate synthetase-like Cobalamin (vitamin B12)-binding domain 11
Nucleotide cyclase EAL domain-like 11
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 11
Cupredoxins Cupredoxins 11
CO dehydrogenase ISP C-domain like CO dehydrogenase molybdoprotein N-domain-like 11
Ribbon-helix-helix ACT-like 11
Trimeric LpxA-like enzymes Phosphoglucomutase, C-terminal domain 11
Enolase N-terminal domain-like Enolase C-terminal domain-like 11
Aldolase AFP III-like domain 11
CBS-domain pair PP2C-like 11
SirA-like DsrEFH-like 11
YhbC-like, N-terminal domain YhbC-like, C-terminal domain 11
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 11
CheY-like Chemotaxis receptor methyltransferase CheR, N-terminal domain 11
ADC-like P-loop containing nucleoside triphosphate hydrolases 11
C-type lectin-like S-adenosyl-L-methionine-dependent methyltransferases 11
Nqo1 FMN-binding domain-like 4Fe-4S ferredoxins 11
Translation proteins ThrRS/AlaRS common domain 11
SufE/NifU Fe-S cluster assembly (FSCA) domain-like 11
Metallo-dependent phosphatases Oligoxyloglucan reducing end-specific cellobiohydrolase 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Eukaryotic type KH-domain (KH-domain type I) 11
ADC synthase D-aminoacid aminotransferase-like PLP-dependent enzymes 11
3-carboxy-cis,cis-mucoante lactonizing enzyme Calcium-dependent phosphotriesterase 11
YjeF N-terminal domain-like Ribokinase-like 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FMN-linked oxidoreductases 11
HAMP domain-like Nucleotide cyclase 11
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 11
Nitrite and sulphite reductase 4Fe-4S domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
S-adenosyl-L-methionine-dependent methyltransferases Nucleotide cyclase 11
S13-like H2TH domain Glucocorticoid receptor-like (DNA-binding domain) 11
Thiamin phosphate synthase Ribokinase-like 11
DHH phosphoesterases Poly A polymerase C-terminal region-like 11
RCC1/BLIP-II RCC1/BLIP-II 11
4Fe-4S ferredoxins HydA/Nqo6-like 11
Voltage-gated potassium channels TrkA C-terminal domain-like 11
"Winged helix" DNA-binding domain PLP-dependent transferases 11
2Fe-2S ferredoxin-like CO dehydrogenase ISP C-domain like 11
HMA, heavy metal-associated domain HAD-like 11
E set domains Type I dockerin domain 11
CO dehydrogenase ISP C-domain like Molybdenum cofactor-binding domain 11
Glutamyl tRNA-reductase catalytic, N-terminal domain Glutamyl tRNA-reductase dimerization domain 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 11
Galactose-binding domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
GIY-YIG endonuclease C-terminal UvrC-binding domain of UvrB 11
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 11
Cobalamin (vitamin B12)-binding domain Cobalamin (vitamin B12)-dependent enzymes 11
CO dehydrogenase molybdoprotein N-domain-like Molybdenum cofactor-binding domain 11
Adenine nucleotide alpha hydrolases-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Cobalamin (vitamin B12)-binding domain TPR-like 11
P-loop containing nucleoside triphosphate hydrolases TGS-like 11
lambda repressor-like DNA-binding domains LexA/Signal peptidase 11
Ricin B-like lectins (Trans)glycosidases 11
EspE N-terminal domain-like Homodimeric domain of signal transducing histidine kinase 11
FliG FliG 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 11
Cupredoxins Integrin alpha N-terminal domain 11
Fic-like "Winged helix" DNA-binding domain 11
Ribonuclease H-like RuvA domain 2-like 11
PYP-like sensor domain (PAS domain) P-loop containing nucleoside triphosphate hydrolases 11
UDP-Glycosyltransferase/glycogen phosphorylase UDP-Glycosyltransferase/glycogen phosphorylase 11
Zinc beta-ribbon Zinc beta-ribbon 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
Nucleotidylyl transferase tRNA-binding arm 11
4Fe-4S ferredoxins Fe-only hydrogenase 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 11
Nucleotide-diphospho-sugar transferases Phosphoglucomutase, C-terminal domain 11
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 11
HprK N-terminal domain-like CBS-domain pair 11
Class II aaRS and biotin synthetases C-terminal domain of transcriptional repressors 11
SP0561-like Periplasmic binding protein-like II 11
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 11
Nqo1C-terminal domain-like 4Fe-4S ferredoxins 11
TGS-like Class II aaRS and biotin synthetases 11
RuvA domain 2-like MCP/YpsA-like 11
Nucleic acid-binding proteins PheT/TilS domain 11
PEP carboxykinase-like P-loop containing nucleoside triphosphate hydrolases 11
Nucleotidyltransferase TGS-like 11
Class II aaRS and biotin synthetases Translation proteins 11
"Winged helix" DNA-binding domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
PurS-like PurM N-terminal domain-like 11
(Trans)glycosidases Glycosyl hydrolase domain 11
DNA polymerase beta, N-terminal domain-like Nucleotidyltransferase 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
MesJ substrate recognition domain-like PheT/TilS domain 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
NHL repeat Concanavalin A-like lectins/glucanases 11
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 11
CheC-like Surface presentation of antigens (SPOA) 11
TrkA C-terminal domain-like TrkA C-terminal domain-like 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 11
FAD-binding/transporter-associated domain-like Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain 11
Nucleic acid-binding proteins DNA helicase RuvA subunit, C-terminal domain 11
L30e-like alpha/beta knot 11
Nucleic acid-binding proteins Anticodon-binding domain of PheRS 11
Methylated DNA-protein cysteine methyltransferase domain Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
Transcription factor NusA, N-terminal domain Prokaryotic type KH domain (KH-domain type II) 11
FabD/lysophospholipase-like ACP-like 11
ADC-like Cdc48 domain 2-like 11
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
Regulatory protein AraC Homeodomain-like 11
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 11
FabD/lysophospholipase-like NAD(P)-binding Rossmann-fold domains 11
Succinyl-CoA synthetase domains Succinyl-CoA synthetase domains 11
4Fe-4S ferredoxins Homeodomain-like 11
HD-domain/PDEase-like Nucleotidyltransferase 11
Periplasmic binding protein-like II GlnB-like 11
Purple acid phosphatase, N-terminal domain Oligoxyloglucan reducing end-specific cellobiohydrolase 11
Iron-dependent repressor protein, dimerization domain C-terminal domain of transcriptional repressors 11
Fibronectin type III Galactose-binding domain-like 11
5' to 3' exonuclease, C-terminal subdomain DNA/RNA polymerases 11
"Winged helix" DNA-binding domain Class II aaRS and biotin synthetases 11
Chorismate mutase II ACT-like 11
Nucleotidyltransferase substrate binding subunit/domain Nucleotidyltransferase substrate binding subunit/domain 11
TPR-like L,D-transpeptidase catalytic domain-like 11
Carbamate kinase-like ACT-like 11
CheY-like Chaperone J-domain 11
Nitrite/Sulfite reductase N-terminal domain-like Nitrite/Sulfite reductase N-terminal domain-like 11
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Eukaryotic type KH-domain (KH-domain type I) HD-domain/PDEase-like 11
NAD(P)-binding Rossmann-fold domains Siroheme synthase middle domains-like 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 11
4Fe-4S ferredoxins 4Fe-4S ferredoxins 11
P-loop containing nucleoside triphosphate hydrolases Cobalamin (vitamin B12)-dependent enzymes 11
DNA repair protein MutS, domain III SMR domain-like 11
AbrB/MazE/MraZ-like Nucleic acid-binding proteins 11
Aconitase B, N-terminal domain LeuD/IlvD-like 11
Rudiment single hybrid motif post-HMGL domain-like 11
Soluble quinoprotein glucose dehydrogenase Fucose-specific lectin 11
PDZ domain-like Radical SAM enzymes 11
3-carboxy-cis,cis-mucoante lactonizing enzyme Fibronectin type III 11
PreATP-grasp domain Aldolase 11
AhpD-like RmlC-like cupins 11
2Fe-2S ferredoxin-like alpha-helical ferredoxin 11
IVS-encoded protein-like Zinc beta-ribbon 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 11
Cytochrome c oxidase subunit II-like, transmembrane region Cupredoxins 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 11
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 11
Cadherin-like NHL repeat 11
ARM repeat ARM repeat 11
Galactose mutarotase-like Six-hairpin glycosidases 11
GAF domain-like Methyl-accepting chemotaxis protein (MCP) signaling domain 11
Ribonuclease PH domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
PreATP-grasp domain PreATP-grasp domain 11
OmpA-like Porins 11
HprK N-terminal domain-like DHH phosphoesterases 11
TGS-like ThrRS/AlaRS common domain 11
PheT/TilS domain Class II aaRS and biotin synthetases 11
Nucleic acid-binding proteins ArfGap/RecO-like zinc finger 11
Probable ACP-binding domain of malonyl-CoA ACP transacylase NAD(P)-binding Rossmann-fold domains 11
EspE N-terminal domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Galactose oxidase, central domain NHL repeat 11
Cysteine proteinases beta-Roll 11
Sec63 N-terminal domain-like PHP domain-like 11
PIN domain-like DNA/RNA polymerases 11
Tex N-terminal region-like Ribonuclease H-like 11
Translation proteins "Winged helix" DNA-binding domain 11
GAF domain-like Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 11
Adenine nucleotide alpha hydrolases-like Homodimeric domain of signal transducing histidine kinase 11
Nucleotide-diphospho-sugar transferases Guanosine diphospho-D-mannose pyrophosphorylase/mannose-6-phosphate isomerase linker domain 11
Glutathione synthetase ATP-binding domain-like Aldolase 11
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 11
GAF domain-like C-terminal effector domain of the bipartite response regulators 11
RNase III domain-like dsRNA-binding domain-like 11
Transcription factor NusA, N-terminal domain Nucleic acid-binding proteins 11
Tetrapyrrole methylase HemD-like 11
Terpenoid cyclases/Protein prenyltransferases Integrin alpha N-terminal domain 11
S-adenosyl-L-methionine-dependent methyltransferases TPR-like 11
EPT/RTPC-like RNA 3'-terminal phosphate cyclase, RPTC, insert domain 11
FabD/lysophospholipase-like Thioesterase/thiol ester dehydrase-isomerase 11
Nucleotide-binding domain FAD/NAD(P)-binding domain 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
Fibronectin type III Invasin/intimin cell-adhesion fragments 11
C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase Nitrous oxide reductase, N-terminal domain 11
CBS-domain pair Poly A polymerase C-terminal region-like 11
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 11
Invasin/intimin cell-adhesion fragments Type I dockerin domain 11
OMPA-like OmpA-like 11
Probable ACP-binding domain of malonyl-CoA ACP transacylase ACP-like 11
Carboxypeptidase regulatory domain-like Concanavalin A-like lectins/glucanases 11
Glutamine synthetase/guanido kinase GatB/YqeY motif 11
Molybdenum cofactor biosynthesis proteins CinA-like 11
all-alpha NTP pyrophosphatases all-alpha NTP pyrophosphatases 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 11
NTF2-like PYP-like sensor domain (PAS domain) 11
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 11
Glutamyl tRNA-reductase catalytic, N-terminal domain NAD(P)-binding Rossmann-fold domains 11
HRDC-like HRDC-like 11
Rudiment single hybrid motif Aldolase 11
6-phosphogluconate dehydrogenase C-terminal domain-like ClpP/crotonase 11
Tex N-terminal region-like RuvA domain 2-like 11
Nucleotidyltransferase substrate binding subunit/domain ACT-like 11
3-carboxy-cis,cis-mucoante lactonizing enzyme 3-carboxy-cis,cis-mucoante lactonizing enzyme 11
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 11
Cna protein B-type domain alpha/beta-Hydrolases 11
L9 N-domain-like Ribosomal protein L9 C-domain 11
N-terminal domain of DnaB helicase P-loop containing nucleoside triphosphate hydrolases 11
P-loop containing nucleoside triphosphate hydrolases PGBD-like 11
Metallo-dependent hydrolases Radical SAM enzymes 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
HD-domain/PDEase-like TGS-like 11
GAF domain-like PP2C-like 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
Aldolase Single hybrid motif 11
NE0471 N-terminal domain-like lambda repressor-like DNA-binding domains 11
E set domains Fibronectin type III 11
Pectin lyase-like Pectin lyase-like 11
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 11
LysM domain Cysteine proteinases 11
PYP-like sensor domain (PAS domain) EAL domain-like 11
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 11
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 11
CheY-like S-adenosyl-L-methionine-dependent methyltransferases 11
Starch-binding domain-like Concanavalin A-like lectins/glucanases 11
Aconitase B, N-terminal domain Aconitase iron-sulfur domain 11
Thiolase-like Thioesterase/thiol ester dehydrase-isomerase 11
Fucose-specific lectin Type I dockerin domain 11
YbaK/ProRS associated domain Class II aaRS ABD-related 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
Terpenoid cyclases/Protein prenyltransferases Terpenoid cyclases/Protein prenyltransferases 11
Pentapeptide repeat-like Oligoxyloglucan reducing end-specific cellobiohydrolase 11
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 11
Trimeric LpxA-like enzymes Phosphoglucomutase, first 3 domains 11
Carbamate kinase-like PUA domain-like 11
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 11
Acylphosphatase/BLUF domain-like Actin-like ATPase domain 11
Ribonuclease H-like HRDC-like 11
Actin-like ATPase domain HD-domain/PDEase-like 11
Concanavalin A-like lectins/glucanases RCC1/BLIP-II 11
2Fe-2S ferredoxin-like Molybdenum cofactor-binding domain 11
Enolase C-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
PUA domain-like alpha/beta knot 11
Homocysteine S-methyltransferase FAD-linked oxidoreductase 11
TGS-like Class II aaRS ABD-related 11
Thioredoxin-like Six-hairpin glycosidases 11
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 11
Chorismate mutase II Periplasmic binding protein-like II 11
Pheromone-binding domain of LuxR-like quorum-sensing transcription factors C-terminal effector domain of the bipartite response regulators 11
beta-N-acetylhexosaminidase-like domain (Trans)glycosidases 11
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 11
Carboxypeptidase regulatory domain-like Pectin lyase-like 11
TPR-like Carbohydrate-binding domain 11
CRISPR-associated protein CRISPR-associated protein 11
Fucose-specific lectin Oligoxyloglucan reducing end-specific cellobiohydrolase 11
YrdC/RibB RibA-like 11
Subtilisin-like Fibronectin type III 11
Nucleotidylyl transferase Ribosomal protein L25-like 11
CheY-like CheY-like 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
beta-lactamase/transpeptidase-like Penicillin-binding protein 2x (pbp-2x), c-terminal domain 11
NAD(P)-binding Rossmann-fold domains Glutamyl tRNA-reductase dimerization domain 11
Periplasmic binding protein-like II ACT-like 11
Macro domain-like Zn-dependent exopeptidases 11
HMA, heavy metal-associated domain HMA, heavy metal-associated domain 11
Nqo1C-terminal domain-like Nucleotide-binding domain 11
3-carboxy-cis,cis-mucoante lactonizing enzyme alpha/beta-Hydrolases 11
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 11
TrmE connector domain P-loop containing nucleoside triphosphate hydrolases 11
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 11
4Fe-4S ferredoxins P-loop containing nucleoside triphosphate hydrolases 11
Purple acid phosphatase, N-terminal domain Metallo-dependent phosphatases 11
GIY-YIG endonuclease RuvA domain 2-like 11
PreATP-grasp domain post-HMGL domain-like 11
GroEL-intermediate domain like GroEL apical domain-like 11
PLP-dependent transferases alpha/beta-Hydrolases 11
CarD-like TRCF domain-like 11
PYP-like sensor domain (PAS domain) Homeodomain-like 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
Chemotaxis receptor methyltransferase CheR, N-terminal domain TPR-like 11
EspE N-terminal domain-like GAF domain-like 11
GroEL equatorial domain-like GroEL-intermediate domain like 11
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 11
DNA clamp DNA clamp 11
Radical SAM enzymes RuvA domain 2-like 11
NTF2-like Sec-C motif 11
Translation proteins Translation proteins 11
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 11
4Fe-4S ferredoxins FMN-dependent nitroreductase-like 11
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 11
Metallo-hydrolase/oxidoreductase Flavoproteins 11
4Fe-4S ferredoxins FMN-linked oxidoreductases 11
Nudix Nudix 11
Putative DNA-binding domain Anticodon-binding domain of PheRS 11
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 11
Ribosomal protein S5 domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
HydA/Nqo6-like Nqo5-like 11
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 11
Trigger factor ribosome-binding domain FKBP-like 11
Cytochrome c oxidase subunit II-like, transmembrane region Cytochrome c 11
CheY-like PP2C-like 11
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 11
Ribokinase-like Nucleotidylyl transferase 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
Nucleotidyltransferase Nucleotidyltransferase 11
Radical SAM enzymes TPR-like 11
Cytidine deaminase-like Dihydrofolate reductase-like 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
Dihydropteroate synthetase-like Methionine synthase domain 11
CbiG N-terminal domain-like CobE/GbiG C-terminal domain-like 11
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 11
Alpha-L RNA-binding motif S-adenosyl-L-methionine-dependent methyltransferases 11
NAD(P)-linked oxidoreductase 4Fe-4S ferredoxins 11
Ribosomal protein S5 domain 2-like HSP90 C-terminal domain 11
E set domains Glycosyl hydrolase domain 11
Starch-binding domain-like Carboxypeptidase regulatory domain-like 11
Cation efflux protein transmembrane domain-like Nitrogenase accessory factor-like 11
Cysteine proteinases Cadherin-like 11
Acylphosphatase/BLUF domain-like YrdC/RibB 11
Rhodanese/Cell cycle control phosphatase P-loop containing nucleoside triphosphate hydrolases 11
Cdc48 domain 2-like P-loop containing nucleoside triphosphate hydrolases 11
ClpP/crotonase NfeD domain-like 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
EspE N-terminal domain-like CheC-like 11
TPR-like Lysozyme-like 11
Translation proteins Initiation factor IF2/eIF5b, domain 3 11
Fe-only hydrogenase P-loop containing nucleoside triphosphate hydrolases 11
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 11
Nucleic acid-binding proteins BRCT domain 11
RmlC-like cupins Homeodomain-like 11
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain "Winged helix" DNA-binding domain 11
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 11
TPR-like Bacterial muramidases 11
Rhodanese/Cell cycle control phosphatase YceI-like 11
Homocysteine S-methyltransferase Methionine synthase domain 11
GAF domain-like Phosphoenolpyruvate/pyruvate domain 11
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 11
TGS-like ACT-like 11
Glutathione synthetase ATP-binding domain-like post-HMGL domain-like 11
Outer membrane efflux proteins (OEP) Sporulation related repeat 11
PilZ domain-like Homeodomain-like 11
Histidine-containing phosphotransfer domain, HPT domain EspE N-terminal domain-like 11
CBS-domain pair Nucleotide-diphospho-sugar transferases 11
Class II aaRS and biotin synthetases YbaK/ProRS associated domain 11
YajQ-like YajQ-like 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Porins Porins 11
S-adenosyl-L-methionine-dependent methyltransferases PYP-like sensor domain (PAS domain) 11
Prokaryotic type I DNA topoisomerase Zinc beta-ribbon 11
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 11
Soluble quinoprotein glucose dehydrogenase Type I dockerin domain 11
Homocysteine S-methyltransferase Cobalamin (vitamin B12)-binding domain 11
FMN-linked oxidoreductases Alpha subunit of glutamate synthase, C-terminal domain 11
PHP domain-like Protein kinase-like (PK-like) 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase HSP90 C-terminal domain 11
Histidine-containing phosphotransfer domain, HPT domain CheY-like 11
Homocysteine S-methyltransferase Dihydropteroate synthetase-like 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain Alkaline phosphatase-like 11
Rubredoxin-like Superoxide reductase-like 11
Poly A polymerase C-terminal region-like ACT-like 11
S-adenosyl-L-methionine-dependent methyltransferases S-adenosyl-L-methionine-dependent methyltransferases 11
Adenine nucleotide alpha hydrolases-like PheT/TilS domain 11
E set domains Invasin/intimin cell-adhesion fragments 11
alpha-helical ferredoxin 4Fe-4S ferredoxins 11
Zinc beta-ribbon DNA primase core 11
RuvA domain 2-like DNA helicase RuvA subunit, C-terminal domain 11
DNA polymerase beta, N-terminal domain-like Sec63 N-terminal domain-like 11
L,D-transpeptidase catalytic domain-like Sporulation related repeat 11
beta-Roll Cadherin-like 11
UbiD C-terminal domain-like UbiD C-terminal domain-like 11
Thioredoxin-like 4Fe-4S ferredoxins 11
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 11
AbrB/MazE/MraZ-like P-loop containing nucleoside triphosphate hydrolases 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain ACT-like 11
P-loop containing nucleoside triphosphate hydrolases SMR domain-like 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
Ribonuclease H-like Nucleic acid-binding proteins 11
Zinc beta-ribbon Prokaryotic SH3-related domain 11
Bacterial muramidases Lysozyme-like 11
Nucleotide-diphospho-sugar transferases UDP-Glycosyltransferase/glycogen phosphorylase 11
Penicillin binding protein dimerisation domain Penicillin-binding protein 2x (pbp-2x), c-terminal domain 11
HD-domain/PDEase-like P-loop containing nucleoside triphosphate hydrolases 11
Methylglyoxal synthase-like Cytidine deaminase-like 11
FKBP-like Thioredoxin-like 11
Nucleotidyltransferase substrate binding subunit/domain Poly A polymerase C-terminal region-like 11
PIN domain-like P-loop containing nucleoside triphosphate hydrolases 11
Nucleic acid-binding proteins GAD domain-like 11
DNA polymerase beta, N-terminal domain-like PHP domain-like 11
post-HMGL domain-like Single hybrid motif 11
Cobalamin (vitamin B12)-binding domain P-loop containing nucleoside triphosphate hydrolases 11
Nqo1 middle domain-like 4Fe-4S ferredoxins 11

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