SUPERFAMILY 1.75 HMM library and genome assignments server

Domain combination pairs in Pelobacter propionicus DSM 2379

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

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Adjacent domain pairs graph

Graph of adjacent domain pairs.


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Domain combination pairs

739 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 6546
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 4937
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 4331
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 3417
PYP-like sensor domain (PAS domain) CheY-like 3023
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheY-like 2821
PYP-like sensor domain (PAS domain) PYP-like sensor domain (PAS domain) 2823
Homodimeric domain of signal transducing histidine kinase CheY-like 2720
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 2211
GAF domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 1613
CheY-like P-loop containing nucleoside triphosphate hydrolases 154
PYP-like sensor domain (PAS domain) Nucleotide cyclase 1411
GAF domain-like Homodimeric domain of signal transducing histidine kinase 1411
CheY-like Homeodomain-like 133
GAF domain-like PYP-like sensor domain (PAS domain) 1312
Actin-like ATPase domain Actin-like ATPase domain 133
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 125
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 116
P-loop containing nucleoside triphosphate hydrolases Translation proteins 106
Nucleotide cyclase EAL domain-like 108
HAMP domain-like Homodimeric domain of signal transducing histidine kinase 107
TPR-like TPR-like 108
PYP-like sensor domain (PAS domain) EAL domain-like 108
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 103
HAMP domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 107
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein S5 domain 2-like 107
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 105
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 95
CheY-like Nucleotide cyclase 97
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 83
CheY-like C-terminal effector domain of the bipartite response regulators 81
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 82
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 74
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB transmembrane domain 74
Homeodomain-like Tetracyclin repressor-like, C-terminal domain 71
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 74
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 74
GAF domain-like P-loop containing nucleoside triphosphate hydrolases 77
Resolvase-like Homeodomain-like 71
Calcium ATPase, transduction domain A HAD-like 76
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 76
HAD-like Calcium ATPase, transmembrane domain M 76
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB transmembrane domain 74
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 73
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 61
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 61
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 64
Histidine-containing phosphotransfer domain, HPT domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 65
Translation proteins EF-G C-terminal domain-like 63
ACT-like ACT-like 63
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 63
Histidine-containing phosphotransfer domain, HPT domain Homodimeric domain of signal transducing histidine kinase 65
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 65
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 61
HAMP domain-like PYP-like sensor domain (PAS domain) 65
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 63
EspE N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 63
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 55
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 52
2Fe-2S ferredoxin-like 4Fe-4S ferredoxins 53
Nucleic acid-binding proteins Nucleic acid-binding proteins 54
PurM N-terminal domain-like PurM C-terminal domain-like 52
Nqo1 FMN-binding domain-like Nqo1C-terminal domain-like 53
Cobalamin (vitamin B12)-binding domain Radical SAM enzymes 53
EF-G C-terminal domain-like EF-G C-terminal domain-like 52
CheY-like EAL domain-like 54
PYP-like sensor domain (PAS domain) P-loop containing nucleoside triphosphate hydrolases 55
GAF domain-like CheY-like 54
Nqo1 FMN-binding domain-like Nqo1 middle domain-like 53
GAF domain-like Homeodomain-like 55
Nqo1 middle domain-like Nqo1C-terminal domain-like 53
Class II aaRS and biotin synthetases Class II aaRS ABD-related 43
HMA, heavy metal-associated domain HAD-like 44
Chemotaxis receptor methyltransferase CheR, N-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 42
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 41
Histidine-containing phosphotransfer domain, HPT domain CheW-like 43
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheW-like 43
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 41
PLP-binding barrel Alanine racemase C-terminal domain-like 43
GroES-like NAD(P)-binding Rossmann-fold domains 41
Thiolase-like Thiolase-like 42
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 43
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 43
Nucleotidyltransferase Poly A polymerase C-terminal region-like 43
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 44
Alpha-L RNA-binding motif Pseudouridine synthase 41
PYP-like sensor domain (PAS domain) Homeodomain-like 44
CheY-like CheY-like 44
Metallo-hydrolase/oxidoreductase Flavoproteins 41
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 42
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 43
Homodimeric domain of signal transducing histidine kinase CheW-like 43
Sm-like ribonucleoproteins Mechanosensitive channel protein MscS (YggB), C-terminal domain 43
PreATP-grasp domain Rudiment single hybrid motif 42
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 44
Triger factor/SurA peptide-binding domain-like FKBP-like 43
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 42
2Fe-2S ferredoxin-like Formate dehydrogenase/DMSO reductase, domains 1-3 42
4Fe-4S ferredoxins Formate dehydrogenase/DMSO reductase, domains 1-3 42
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 32
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 33
NAD(P)-binding Rossmann-fold domains ACT-like 33
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 32
Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), C-terminal domain 32
Homeodomain-like Homeodomain-like 32
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 33
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 33
2Fe-2S ferredoxin-like CO dehydrogenase ISP C-domain like 32
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 31
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 33
cAMP-binding domain-like "Winged helix" DNA-binding domain 31
Rubredoxin-like Ferritin-like 32
Glutathione synthetase ATP-binding domain-like Phosphoenolpyruvate/pyruvate domain 33
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 32
MoeA N-terminal region -like Molybdenum cofactor biosynthesis proteins 32
Thioesterase/thiol ester dehydrase-isomerase Thioesterase/thiol ester dehydrase-isomerase 32
NAD(P)-binding Rossmann-fold domains UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 32
Translation proteins Ribosomal protein S5 domain 2-like 31
CO dehydrogenase molybdoprotein N-domain-like Molybdenum cofactor-binding domain 32
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 32
6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 32
EF-G C-terminal domain-like Ribosomal protein S5 domain 2-like 31
CheY-like HD-domain/PDEase-like 32
Formate dehydrogenase/DMSO reductase, domains 1-3 ADC-like 32
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 32
Periplasmic binding protein-like II ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 33
Sensory domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 33
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 33
Molybdenum cofactor biosynthesis proteins MoeA C-terminal domain-like 32
"Winged helix" DNA-binding domain LexA/Signal peptidase 31
HAMP domain-like Nucleotide cyclase 33
Periplasmic binding protein-like II Homodimeric domain of signal transducing histidine kinase 33
Nqo5-like HydB/Nqo4-like 31
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 32
Sensory domain-like Homodimeric domain of signal transducing histidine kinase 33
RuvA domain 2-like Nucleic acid-binding proteins 33
DsbC/DsbG N-terminal domain-like Thioredoxin-like 31
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 33
Formate dehydrogenase/DMSO reductase, domains 1-3 Formate dehydrogenase/DMSO reductase, domains 1-3 31
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 32
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 32
Aldolase post-HMGL domain-like 32
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Adenine nucleotide alpha hydrolases-like 31
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 32
Aldehyde ferredoxin oxidoreductase, N-terminal domain Aldehyde ferredoxin oxidoreductase, C-terminal domains 31
Translation proteins SH3-like domain Nucleic acid-binding proteins 32
MoeA N-terminal region -like MoeA C-terminal domain-like 32
Sensory domain-like HAMP domain-like 22
4Fe-4S ferredoxins FMN-dependent nitroreductase-like 21
Terpenoid cyclases/Protein prenyltransferases Terpenoid cyclases/Protein prenyltransferases 21
MurCD N-terminal domain MurD-like peptide ligases, catalytic domain 21
LysM domain LysM domain 22
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 22
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 22
Thiamin diphosphate-binding fold (THDP-binding) Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 22
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 21
Class II aaRS and biotin synthetases ThrRS/AlaRS common domain 22
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 22
PDZ domain-like PDZ domain-like 22
E set domains (Trans)glycosidases 22
LysM domain L,D-transpeptidase catalytic domain-like 22
Radical SAM enzymes "Helical backbone" metal receptor 21
P-loop containing nucleoside triphosphate hydrolases MOP-like 21
Nucleotidyltransferase ACT-like 22
CheY-like Histidine-containing phosphotransfer domain, HPT domain 22
Formate/glycerate dehydrogenase catalytic domain-like ACT-like 22
GAF domain-like HD-domain/PDEase-like 22
HAMP domain-like CheY-like 22
TPR-like UDP-Glycosyltransferase/glycogen phosphorylase 22
"Winged helix" DNA-binding domain GntR ligand-binding domain-like 21
NagB/RpiA/CoA transferase-like NagB/RpiA/CoA transferase-like 21
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 22
tRNA-binding arm Class II aaRS and biotin synthetases 21
EAL domain-like HD-domain/PDEase-like 21
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphohistidine domain 22
lambda repressor-like DNA-binding domains RmlC-like cupins 21
HMA, heavy metal-associated domain HMA, heavy metal-associated domain 22
Nucleotidyltransferase Nucleotidyltransferase substrate binding subunit/domain 22
Chaperone J-domain HSP40/DnaJ peptide-binding domain 22
EspE N-terminal domain-like EspE N-terminal domain-like 22
CheY-like Methylesterase CheB, C-terminal domain 21
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 22
TK C-terminal domain-like Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 22
ClpP/crotonase ClpP/crotonase 21
Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases 22
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 22
DnaK suppressor protein DksA, alpha-hairpin domain Glucocorticoid receptor-like (DNA-binding domain) 21
N-terminal domain of DnaB helicase P-loop containing nucleoside triphosphate hydrolases 21
Nucleotide-binding domain alpha-helical ferredoxin 22
(Trans)glycosidases Glycosyl hydrolase domain 22
Multiheme cytochromes Multiheme cytochromes 21
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 22
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 22
Zinc beta-ribbon DNA primase core 21
"Winged helix" DNA-binding domain GAF domain-like 21
Formyltransferase FMT C-terminal domain-like 21
Methionine synthase domain Cobalamin (vitamin B12)-binding domain 22
"Winged helix" DNA-binding domain Periplasmic binding protein-like II 21
Fic-like "Winged helix" DNA-binding domain 21
Metal cation-transporting ATPase, ATP-binding domain N Calcium ATPase, transmembrane domain M 21
Trypsin-like serine proteases PDZ domain-like 22
Thiolase-like FabD/lysophospholipase-like 22
Penicillin binding protein dimerisation domain beta-lactamase/transpeptidase-like 22
FMN-binding split barrel UbiD C-terminal domain-like 22
Adenine nucleotide alpha hydrolases-like Adenine nucleotide alpha hydrolases-like 21
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
"Winged helix" DNA-binding domain S-adenosyl-L-methionine-dependent methyltransferases 22
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 21
CBS-domain pair DHH phosphoesterases 22
Protein kinase-like (PK-like) P-loop containing nucleoside triphosphate hydrolases 22
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 22
Metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 22
CBS-domain pair FAD-binding/transporter-associated domain-like 21
P-loop containing nucleoside triphosphate hydrolases vWA-like 21
YgfB-like Sec-C motif 22
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 21
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 22
Periplasmic binding protein-like II GAF domain-like 22
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 22
PIN domain-like Ribonuclease H-like 22
MOP-like MOP-like 22
Thioredoxin-like Six-hairpin glycosidases 21
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 22
Calcium ATPase, transduction domain A Metal cation-transporting ATPase, ATP-binding domain N 21
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 21
Acyl-CoA N-acyltransferases (Nat) Acyl-CoA N-acyltransferases (Nat) 21
5' to 3' exonuclease, C-terminal subdomain Ribonuclease H-like 22
HlyD-like secretion proteins HlyD-like secretion proteins 22
NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains 22
CheW-like CheY-like 21
Nucleic acid-binding proteins S-adenosyl-L-methionine-dependent methyltransferases 21
Metal cation-transporting ATPase, ATP-binding domain N HAD-like 21
PUA domain-like Ribosomal protein S5 domain 2-like 22
RuvA domain 2-like P-loop containing nucleoside triphosphate hydrolases 21
NAD(P)-binding Rossmann-fold domains TrkA C-terminal domain-like 22
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 22
FAD-binding/transporter-associated domain-like CO dehydrogenase flavoprotein C-terminal domain-like 21
Phospholipase D/nuclease Phospholipase D/nuclease 21
MurCD N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 21
Lysozyme-like beta-lactamase/transpeptidase-like 22
P-loop containing nucleoside triphosphate hydrolases Restriction endonuclease-like 22
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 21
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 22
Cobalamin (vitamin B12)-dependent enzymes Cobalamin (vitamin B12)-binding domain 21
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphoenolpyruvate/pyruvate domain 22
Periplasmic binding protein-like II PYP-like sensor domain (PAS domain) 22
GreA transcript cleavage protein, N-terminal domain FKBP-like 21
Iron-dependent repressor protein, dimerization domain C-terminal domain of transcriptional repressors 21
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 22
PreATP-grasp domain Aldolase 11
PurS-like PurS-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
Eukaryotic type KH-domain (KH-domain type I) Nucleic acid-binding proteins 11
Aconitase B, N-terminal domain Aconitase iron-sulfur domain 11
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 11
beta-lactamase/transpeptidase-like Penicillin-binding protein 2x (pbp-2x), c-terminal domain 11
Cadherin-like Cadherin-like 11
FMN-linked oxidoreductases Alpha subunit of glutamate synthase, C-terminal domain 11
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 11
Nqo1 FMN-binding domain-like 4Fe-4S ferredoxins 11
Methylesterase CheB, C-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 11
PheT/TilS domain Anticodon-binding domain of PheRS 11
Glutathione synthetase ATP-binding domain-like Single hybrid motif 11
lambda repressor-like DNA-binding domains Periplasmic binding protein-like II 11
Class II aaRS and biotin synthetases GAD domain-like 11
Histidine-containing phosphotransfer domain, HPT domain EspE N-terminal domain-like 11
Alpha-L RNA-binding motif HIT-like 11
Nucleotide-diphospho-sugar transferases Phosphoglucomutase, C-terminal domain 11
YajQ-like YajQ-like 11
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 11
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
Ribosomal protein L6 Ribosomal protein L6 11
lambda repressor-like DNA-binding domains lambda repressor-like DNA-binding domains 11
Glutamine synthetase/guanido kinase GatB/YqeY motif 11
NagB/RpiA/CoA transferase-like alpha-helical ferredoxin 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
Aldolase Single hybrid motif 11
PYP-like sensor domain (PAS domain) PP2C-like 11
GIY-YIG endonuclease RuvA domain 2-like 11
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 11
4Fe-4S ferredoxins Fe-only hydrogenase 11
Sensory domain-like PYP-like sensor domain (PAS domain) 11
PDZ domain-like Radical SAM enzymes 11
PurS-like PurM C-terminal domain-like 11
Nucleic acid-binding proteins DNA helicase RuvA subunit, C-terminal domain 11
2Fe-2S ferredoxin-like CO dehydrogenase molybdoprotein N-domain-like 11
LysM domain Cysteine proteinases 11
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 11
Rubredoxin-like Rubredoxin-like 11
TrmE connector domain P-loop containing nucleoside triphosphate hydrolases 11
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 11
"Winged helix" DNA-binding domain MOP-like 11
EspE N-terminal domain-like CheY-like 11
Trigger factor ribosome-binding domain FKBP-like 11
CO dehydrogenase ISP C-domain like Molybdenum cofactor-binding domain 11
Enolase N-terminal domain-like Enolase C-terminal domain-like 11
EAL domain-like CBS-domain pair 11
Multiheme cytochromes Oxidoreductase molybdopterin-binding domain 11
Alpha subunit of glutamate synthase, C-terminal domain 4Fe-4S ferredoxins 11
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 11
Nucleotide-diphospho-sugar transferases HD-domain/PDEase-like 11
MgtE N-terminal domain-like CBS-domain pair 11
YlxR-like L30e-like 11
Transcription factor NusA, N-terminal domain Nucleic acid-binding proteins 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
YjgF-like YjgF-like 11
Homocysteine S-methyltransferase Methionine synthase domain 11
GroEL equatorial domain-like GroEL-intermediate domain like 11
P-loop containing nucleoside triphosphate hydrolases TPR-like 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
PreATP-grasp domain post-HMGL domain-like 11
HRDC-like HRDC-like 11
GIY-YIG endonuclease C-terminal UvrC-binding domain of UvrB 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
P-loop containing nucleoside triphosphate hydrolases Homodimeric domain of signal transducing histidine kinase 11
MgtE N-terminal domain-like CorA soluble domain-like 11
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 11
S-adenosyl-L-methionine-dependent methyltransferases ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
DNA methylase specificity domain DNA methylase specificity domain 11
PIN domain-like DNA/RNA polymerases 11
DNA repair protein MutS, domain III SMR domain-like 11
NAD(P)-binding Rossmann-fold domains Glutamyl tRNA-reductase dimerization domain 11
Nucleotide cyclase CBS-domain pair 11
lambda integrase-like, N-terminal domain DNA breaking-rejoining enzymes 11
Protein kinase-like (PK-like) Homodimeric domain of signal transducing histidine kinase 11
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 11
Ribokinase-like Nucleotidylyl transferase 11
HAMP domain-like Histidine-containing phosphotransfer domain, HPT domain 11
Folate-binding domain Aminomethyltransferase beta-barrel domain 11
HAMP domain-like EAL domain-like 11
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 11
HprK N-terminal domain-like PEP carboxykinase-like 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
FabD/lysophospholipase-like Thioesterase/thiol ester dehydrase-isomerase 11
PheT/TilS domain Putative DNA-binding domain 11
PEP carboxykinase N-terminal domain PEP carboxykinase-like 11
DHH phosphoesterases Nucleotidyltransferase 11
TPR-like Lysozyme-like 11
Homo-oligomeric flavin-containing Cys decarboxylases, HFCD CoaB-like 11
Putative DNA-binding domain Anticodon-binding domain of PheRS 11
Glycerol-3-phosphate (1)-acyltransferase Acetyl-CoA synthetase-like 11
TGS-like ThrRS/AlaRS common domain 11
4Fe-4S ferredoxins FMN-linked oxidoreductases 11
Poly A polymerase C-terminal region-like ACT-like 11
Nucleotide-diphospho-sugar transferases Phosphoglucomutase, first 3 domains 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
Probable ACP-binding domain of malonyl-CoA ACP transacylase NAD(P)-binding Rossmann-fold domains 11
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
MoeA C-terminal domain-like Periplasmic binding protein-like II 11
HAMP domain-like PP2C-like 11
Nucleotide cyclase Nucleotide cyclase 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
Ribosomal protein S5 domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
4'-phosphopantetheinyl transferase 4'-phosphopantetheinyl transferase 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
CbiG N-terminal domain-like CobE/GbiG C-terminal domain-like 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 11
Nqo1C-terminal domain-like 4Fe-4S ferredoxins 11
Pentapeptide repeat-like Pentapeptide repeat-like 11
L9 N-domain-like Ribosomal protein L9 C-domain 11
FAD/NAD-linked reductases, dimerisation (C-terminal) domain Rhodanese/Cell cycle control phosphatase 11
Glutamyl tRNA-reductase catalytic, N-terminal domain Glutamyl tRNA-reductase dimerization domain 11
Trimeric LpxA-like enzymes Phosphoglucomutase, C-terminal domain 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
Rubredoxin-like Superoxide reductase-like 11
Nucleic acid-binding proteins ArfGap/RecO-like zinc finger 11
Bacterial muramidases Lysozyme-like 11
PUA domain-like alpha/beta knot 11
"Winged helix" DNA-binding domain Chorismate lyase-like 11
GAF domain-like PP2C-like 11
Voltage-gated potassium channels NAD(P)-binding Rossmann-fold domains 11
Hsp33 domain HSP33 redox switch-like 11
4Fe-4S ferredoxins P-loop containing nucleoside triphosphate hydrolases 11
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 11
TGS-like ACT-like 11
Rho N-terminal domain-like Nucleic acid-binding proteins 11
EspE N-terminal domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
MgtE N-terminal domain-like Magnesium transport protein CorA, transmembrane region 11
HD-domain/PDEase-like TGS-like 11
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 11
TPR-like C-terminal effector domain of the bipartite response regulators 11
GAF domain-like Phosphoenolpyruvate/pyruvate domain 11
Methylated DNA-protein cysteine methyltransferase domain Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
Thiolase-like Thioesterase/thiol ester dehydrase-isomerase 11
Nucleic acid-binding proteins Prokaryotic type KH domain (KH-domain type II) 11
P-loop containing nucleoside triphosphate hydrolases TGS-like 11
Nucleotide-diphospho-sugar transferases Guanosine diphospho-D-mannose pyrophosphorylase/mannose-6-phosphate isomerase linker domain 11
Eukaryotic type KH-domain (KH-domain type I) HD-domain/PDEase-like 11
PurS-like PurM N-terminal domain-like 11
CRISPR-associated protein CRISPR-associated protein 11
Sensory domain-like CheY-like 11
Probable ACP-binding domain of malonyl-CoA ACP transacylase ACP-like 11
Nucleotidylyl transferase Riboflavin kinase-like 11
Tex N-terminal region-like RuvA domain 2-like 11
2Fe-2S ferredoxin-like alpha-helical ferredoxin 11
Radical SAM enzymes Thioesterase/thiol ester dehydrase-isomerase 11
Glutathione synthetase ATP-binding domain-like Succinyl-CoA synthetase domains 11
UDP-Glycosyltransferase/glycogen phosphorylase UDP-Glycosyltransferase/glycogen phosphorylase 11
Cryptochrome/photolyase, N-terminal domain Cryptochrome/photolyase FAD-binding domain 11
Rubredoxin-like FAD/NAD(P)-binding domain 11
ACP-like NAD(P)-binding Rossmann-fold domains 11
Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 4Fe-4S ferredoxins 11
Transcription factor NusA, N-terminal domain Prokaryotic type KH domain (KH-domain type II) 11
SP0561-like Periplasmic binding protein-like II 11
P-loop containing nucleoside triphosphate hydrolases CarD-like 11
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 11
Prim-pol domain DNA/RNA polymerases 11
RuvA domain 2-like RuvA domain 2-like 11
Molybdenum cofactor biosynthesis proteins Periplasmic binding protein-like II 11
FAD/NAD(P)-binding domain 4Fe-4S ferredoxins 11
GAF domain-like Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 11
Nucleotide-diphospho-sugar transferases TPR-like 11
Phospholipase D/nuclease P-loop containing nucleoside triphosphate hydrolases 11
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 11
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 11
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 11
Translation proteins Initiation factor IF2/eIF5b, domain 3 11
Heme-dependent peroxidases Heme-dependent peroxidases 11
Alpha-L RNA-binding motif S-adenosyl-L-methionine-dependent methyltransferases 11
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 11
Chorismate mutase II ACT-like 11
2Fe-2S ferredoxin-like Molybdenum cofactor-binding domain 11
Cobalamin (vitamin B12)-binding domain TPR-like 11
YjeF N-terminal domain-like Ribokinase-like 11
Alpha subunit of glutamate synthase, C-terminal domain FAD/NAD(P)-binding domain 11
Rhodanese/Cell cycle control phosphatase P-loop containing nucleoside triphosphate hydrolases 11
Nucleotidyltransferase substrate binding subunit/domain ACT-like 11
Caspase-like P-loop containing nucleoside triphosphate hydrolases 11
Protein kinase-like (PK-like) GAF domain-like 11
Dihydropteroate synthetase-like Methionine synthase domain 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
Riboflavin synthase domain-like Riboflavin synthase domain-like 11
HD-domain/PDEase-like P-loop containing nucleoside triphosphate hydrolases 11
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 11
UbiD C-terminal domain-like UbiD C-terminal domain-like 11
Nucleotide-diphospho-sugar transferases Protein kinase-like (PK-like) 11
RuvA domain 2-like BRCT domain 11
HprK N-terminal domain-like CBS-domain pair 11
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 11
Flavoproteins 4Fe-4S ferredoxins 11
"Winged helix" DNA-binding domain Class II aaRS and biotin synthetases 11
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 11
Tetrapyrrole methylase Class I glutamine amidotransferase-like 11
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 11
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 11
YhbC-like, N-terminal domain YhbC-like, C-terminal domain 11
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 11
MetI-like MetI-like 11
Rudiment single hybrid motif Single hybrid motif 11
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 11
Ribbon-helix-helix ACT-like 11
RNase III domain-like dsRNA-binding domain-like 11
EspE N-terminal domain-like Fibronectin type III 11
Carbamate kinase-like ACT-like 11
HD-domain/PDEase-like ACT-like 11
Thiolase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 11
5' to 3' exonuclease, C-terminal subdomain DNA/RNA polymerases 11
Homocysteine S-methyltransferase FAD-linked oxidoreductase 11
Sporulation related repeat Cysteine proteinases 11
Cation efflux protein cytoplasmic domain-like Nitrogenase accessory factor-like 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
ParB/Sulfiredoxin KorB DNA-binding domain-like 11
PheT/TilS domain Class II aaRS and biotin synthetases 11
Ribonuclease H-like RuvA domain 2-like 11
L30e-like alpha/beta knot 11
Mss4-like Peptide methionine sulfoxide reductase 11
HprK N-terminal domain-like DHH phosphoesterases 11
Nucleotidyltransferase Nucleotidyltransferase 11
Dihydropteroate synthetase-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
TPR-like Bacterial muramidases 11
PYP-like sensor domain (PAS domain) Histidine-containing phosphotransfer domain, HPT domain 11
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 11
NTF2-like Sec-C motif 11
Class II aaRS and biotin synthetases Translation proteins 11
FAD-binding/transporter-associated domain-like Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain 11
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 11
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 11
CheC-like CheY-like 11
Periplasmic binding protein-like II ACT-like 11
PHP domain-like P-loop containing nucleoside triphosphate hydrolases 11
DNA-glycosylase "Winged helix" DNA-binding domain 11
E set domains Glycosyl hydrolase domain 11
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 11
Carbamate kinase-like PUA domain-like 11
SufE/NifU Fe-S cluster assembly (FSCA) domain-like 11
Tetrapyrrole methylase S-adenosyl-L-methionine-dependent methyltransferases 11
all-alpha NTP pyrophosphatases all-alpha NTP pyrophosphatases 11
Thiolase-like NAD(P)-binding Rossmann-fold domains 11
Single hybrid motif Single hybrid motif 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
RBP11-like subunits of RNA polymerase C-terminal domain of RNA polymerase alpha subunit 11
Zinc beta-ribbon Prokaryotic SH3-related domain 11
Nucleotidyltransferase substrate binding subunit/domain Nucleotidyltransferase substrate binding subunit/domain 11
HD-domain/PDEase-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Nqo1 middle domain-like 4Fe-4S ferredoxins 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 11
Periplasmic binding protein-like II GlnB-like 11
LysM domain Sporulation related repeat 11
Aspartate/glutamate racemase Aspartate/glutamate racemase 11
Thioredoxin-like Nqo1 middle domain-like 11
Serine metabolism enzymes domain ACT-like 11
P-loop containing nucleoside triphosphate hydrolases SMR domain-like 11
C-terminal domain of transcriptional repressors Nucleotide cyclase 11
Homocysteine S-methyltransferase Cobalamin (vitamin B12)-binding domain 11
DHH phosphoesterases Poly A polymerase C-terminal region-like 11
Acylphosphatase/BLUF domain-like Actin-like ATPase domain 11
2Fe-2S ferredoxin-like Fe-only hydrogenase 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
post-HMGL domain-like Single hybrid motif 11
Nucleotidyltransferase substrate binding subunit/domain Poly A polymerase C-terminal region-like 11
(Trans)glycosidases Protein kinase-like (PK-like) 11
TGS-like Class II aaRS ABD-related 11
Molybdenum cofactor biosynthesis proteins CinA-like 11
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Eukaryotic type KH-domain (KH-domain type I) 11
P-loop containing nucleoside triphosphate hydrolases C-terminal effector domain of the bipartite response regulators 11
MesJ substrate recognition domain-like PheT/TilS domain 11
S-adenosyl-L-methionine-dependent methyltransferases HIT-like 11
Cysteine proteinases alpha/beta-Hydrolases 11
Chemotaxis receptor methyltransferase CheR, N-terminal domain PYP-like sensor domain (PAS domain) 11
FAD/NAD(P)-binding domain Rhodanese/Cell cycle control phosphatase 11
EspE N-terminal domain-like CheW-like 11
SirA-like DsrEFH-like 11
MFS general substrate transporter Acetyl-CoA synthetase-like 11
"Winged helix" DNA-binding domain NagB/RpiA/CoA transferase-like 11
Translation proteins ThrRS/AlaRS common domain 11
P-loop containing nucleoside triphosphate hydrolases PGBD-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
Ribonuclease H-like Nucleic acid-binding proteins 11
4Fe-4S ferredoxins ADC-like 11
Ribosomal protein S5 domain 2-like HSP90 C-terminal domain 11
Class I glutamine amidotransferase-like HD-domain/PDEase-like 11
PIN domain-like P-loop containing nucleoside triphosphate hydrolases 11
"Winged helix" DNA-binding domain C-terminal domain of transcriptional repressors 11
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 11
P-loop containing nucleoside triphosphate hydrolases ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
FliG FliG 11
Tetrapyrrole methylase P-loop containing nucleoside triphosphate hydrolases 11
EspE N-terminal domain-like PR-1-like 11
PreATP-grasp domain Single hybrid motif 11
Cytidine deaminase-like Dihydrofolate reductase-like 11
S-adenosyl-L-methionine-dependent methyltransferases P-loop containing nucleoside triphosphate hydrolases 11
PK beta-barrel domain-like PK C-terminal domain-like 11
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 11
EspE N-terminal domain-like Homodimeric domain of signal transducing histidine kinase 11
CBS-domain pair Poly A polymerase C-terminal region-like 11
Single hybrid motif CoA-dependent acyltransferases 11
Tetrapyrrole methylase HemD-like 11
Nucleotidylyl transferase tRNA-binding arm 11
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
GroEL equatorial domain-like GroEL apical domain-like 11
Starch-binding domain-like Terpenoid cyclases/Protein prenyltransferases 11
Thioredoxin-like Nqo1 FMN-binding domain-like 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
N-terminal domain of MutM-like DNA repair proteins Glucocorticoid receptor-like (DNA-binding domain) 11
Glutathione synthetase ATP-binding domain-like Aldolase 11
S13-like H2TH domain Glucocorticoid receptor-like (DNA-binding domain) 11
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 11
Nucleotide-diphospho-sugar transferases Radical SAM enzymes 11
RuvA domain 2-like MCP/YpsA-like 11
Metallo-dependent hydrolases Radical SAM enzymes 11
Methylesterase CheB, C-terminal domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 11
2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain Alkaline phosphatase-like 11
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
Elongation factor Ts (EF-Ts), dimerisation domain Elongation factor Ts (EF-Ts), dimerisation domain 11
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 11
GAF domain-like Nucleotide cyclase 11
TGS-like Class II aaRS and biotin synthetases 11
Glutamyl tRNA-reductase catalytic, N-terminal domain NAD(P)-binding Rossmann-fold domains 11
Glucocorticoid receptor-like (DNA-binding domain) P-loop containing nucleoside triphosphate hydrolases 11
Rho N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
Dihydropteroate synthetase-like Cobalamin (vitamin B12)-binding domain 11
Nucleic acid-binding proteins PheT/TilS domain 11
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 11
Acyl-CoA N-acyltransferases (Nat) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Trimeric LpxA-like enzymes Phosphoglucomutase, first 3 domains 11
GroEL-intermediate domain like GroEL apical domain-like 11
Cation efflux protein transmembrane domain-like Nitrogenase accessory factor-like 11
Chaperone J-domain EspE N-terminal domain-like 11
NAD(P)-binding Rossmann-fold domains Serine metabolism enzymes domain 11
L,D-transpeptidase catalytic domain-like Sporulation related repeat 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 11
beta-Roll beta-Roll 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase HSP90 C-terminal domain 11
E set domains E set domains 11
Thioredoxin-like Nqo1C-terminal domain-like 11
Methylesterase CheB, C-terminal domain Chemotaxis receptor methyltransferase CheR, N-terminal domain 11
Prokaryotic type I DNA topoisomerase Zinc beta-ribbon 11
Nucleic acid-binding proteins GAD domain-like 11
YrdC/RibB RibA-like 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
Formate/glycerate dehydrogenase catalytic domain-like Serine metabolism enzymes domain 11
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 11
Porins Porins 11
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 11
Zinc beta-ribbon Zinc beta-ribbon 11
P-loop containing nucleoside triphosphate hydrolases Smc hinge domain 11
Putative DNA-binding domain Phoshotransferase/anion transport protein 11
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 11
CBS-domain pair Nucleotidyltransferase 11
Tex N-terminal region-like Ribonuclease H-like 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11
OMPA-like TSP type-3 repeat 11
Methylglyoxal synthase-like Cytidine deaminase-like 11
Ribonuclease H-like mu transposase, C-terminal domain 11
Transposase IS200-like TrpR-like 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain ACT-like 11
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 11
Phage tail proteins gp5 N-terminal domain-like 11
C-terminal UvrC-binding domain of UvrB RuvA domain 2-like 11
P-loop containing nucleoside triphosphate hydrolases HRDC-like 11
Translation proteins Translation proteins 11
Prokaryotic type KH domain (KH-domain type II) Prokaryotic type KH domain (KH-domain type II) 11
Methylesterase CheB, C-terminal domain Homodimeric domain of signal transducing histidine kinase 11
Chemotaxis receptor methyltransferase CheR, N-terminal domain Homodimeric domain of signal transducing histidine kinase 11
Nucleic acid-binding proteins Anticodon-binding domain of PheRS 11
Glutathione synthetase ATP-binding domain-like post-HMGL domain-like 11
Chemotaxis receptor methyltransferase CheR, N-terminal domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
EAL domain-like EAL domain-like 11
"Helical backbone" metal receptor "Helical backbone" metal receptor 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
PHP domain-like AF1531-like 11
FabD/lysophospholipase-like ACP-like 11
Barwin-like endoglucanases Sporulation related repeat 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
TK C-terminal domain-like 4Fe-4S ferredoxins 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Nucleic acid-binding proteins 11
Class II aaRS and biotin synthetases YbaK/ProRS associated domain 11
S-adenosyl-L-methionine-dependent methyltransferases PYP-like sensor domain (PAS domain) 11
HIT-like HIT-like 11
4Fe-4S ferredoxins HydA/Nqo6-like 11
Translation proteins PRC-barrel domain 11
Ribonuclease PH domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
Succinyl-CoA synthetase domains Succinyl-CoA synthetase domains 11
LeuD/IlvD-like Aconitase iron-sulfur domain 11
TolB, N-terminal domain Tricorn protease N-terminal domain 11
Lysozyme-like LysM domain 11
MoeA N-terminal region -like Periplasmic binding protein-like II 11
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
Chorismate mutase II Periplasmic binding protein-like II 11
ADC synthase D-aminoacid aminotransferase-like PLP-dependent enzymes 11
MFS general substrate transporter Glycerol-3-phosphate (1)-acyltransferase 11
Class II aaRS and biotin synthetases C-terminal domain of transcriptional repressors 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Alpha subunit of glutamate synthase, C-terminal domain 11
R1 subunit of ribonucleotide reductase, N-terminal domain PFL-like glycyl radical enzymes 11
Adenine nucleotide alpha hydrolases-like PheT/TilS domain 11
Aconitase B, N-terminal domain LeuD/IlvD-like 11
Aminopeptidase/glucanase lid domain Zn-dependent exopeptidases 11
Ribonuclease H-like DNA/RNA polymerases 11
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 11
NAD(P)-binding Rossmann-fold domains Siroheme synthase middle domains-like 11
GAF domain-like Phosphohistidine domain 11
GAF domain-like GAF domain-like 11
Rudiment single hybrid motif Aldolase 11
Nucleotidylyl transferase Ribosomal protein L25-like 11
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 11
Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 11
YrdC/RibB Actin-like ATPase domain 11
Nucleotidyltransferase TGS-like 11
P-loop containing nucleoside triphosphate hydrolases HprK N-terminal domain-like 11
Carbon-nitrogen hydrolase Adenine nucleotide alpha hydrolases-like 11
WD40 repeat-like MetI-like 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
Tex N-terminal region-like Nucleic acid-binding proteins 11
CheC-like Surface presentation of antigens (SPOA) 11
Thiamin diphosphate-binding fold (THDP-binding) 4Fe-4S ferredoxins 11
DNA ligase/mRNA capping enzyme, catalytic domain RuvA domain 2-like 11
PYP-like sensor domain (PAS domain) CBS-domain pair 11
HD-domain/PDEase-like Nucleotidyltransferase 11
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 11
Metallo-dependent phosphatases 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain 11
TSP type-3 repeat OmpA-like 11
PreATP-grasp domain Methylglyoxal synthase-like 11
ACP-like ACP-like 11
Acyl-CoA N-acyltransferases (Nat) Nucleotidylyl transferase 11
Voltage-gated potassium channels TrkA C-terminal domain-like 11
HD-domain/PDEase-like Nucleotide cyclase 11
Nucleic acid-binding proteins BRCT domain 11
alpha/beta-Hydrolases beta-Roll 11
beta-Roll Cadherin-like 11
TTHA1013/TTHA0281-like Ribbon-helix-helix 11
Protein kinase-like (PK-like) PYP-like sensor domain (PAS domain) 11
PUA domain-like S-adenosyl-L-methionine-dependent methyltransferases 11
Nucleic acid-binding proteins Putative DNA-binding domain 11
DNA clamp DNA clamp 11
vWA-like OmpA-like 11
Thiolase-like ACP-like 11
Protein kinase-like (PK-like) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
PDZ domain-like ClpP/crotonase 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FMN-linked oxidoreductases 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
E set domains alpha/beta-Hydrolases 11
FabD/lysophospholipase-like NAD(P)-binding Rossmann-fold domains 11
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 11
Tropomyosin TPR-like 11
Methylesterase CheB, C-terminal domain PYP-like sensor domain (PAS domain) 11
2Fe-2S ferredoxin-like ADC-like 11
S-adenosyl-L-methionine-dependent methyltransferases Homodimeric domain of signal transducing histidine kinase 11
Thiamin phosphate synthase Ribokinase-like 11
PreATP-grasp domain PreATP-grasp domain 11
P-loop containing nucleoside triphosphate hydrolases TrpR-like 11
Penicillin binding protein dimerisation domain Penicillin-binding protein 2x (pbp-2x), c-terminal domain 11
YbaK/ProRS associated domain Class II aaRS ABD-related 11
GAF domain-like Methyl-accepting chemotaxis protein (MCP) signaling domain 11
Adenine nucleotide alpha hydrolases-like MesJ substrate recognition domain-like 11
Nudix Nudix 11
RuvA domain 2-like DNA helicase RuvA subunit, C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases C-terminal UvrC-binding domain of UvrB 11
CarD-like TRCF domain-like 11
Glycosyl hydrolase domain Protein kinase-like (PK-like) 11
Acylphosphatase/BLUF domain-like YrdC/RibB 11
Homocysteine S-methyltransferase Dihydropteroate synthetase-like 11
Methyl-accepting chemotaxis protein (MCP) signaling domain Hemerythrin-like 11
OMPA-like OmpA-like 11
Radical SAM enzymes TPR-like 11
Rudiment single hybrid motif post-HMGL domain-like 11
Methyl-accepting chemotaxis protein (MCP) signaling domain Methyl-accepting chemotaxis protein (MCP) signaling domain 11
Nucleotide-diphospho-sugar transferases NAD(P)-binding Rossmann-fold domains 11
Ribonuclease H-like HRDC-like 11
CO dehydrogenase ISP C-domain like CO dehydrogenase molybdoprotein N-domain-like 11
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 11
OmpA-like OmpA-like 11

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