SUPERFAMILY 1.75 HMM library and genome assignments server

Domain combination pairs in Photorhabdus asymbiotica

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

  • For a list of unique full length architectures for this genome click here (can be slow).
Adjacent domain pairs graph

Graph of adjacent domain pairs.


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Domain combination pairs

736 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 3213
CoA-dependent acyltransferases CoA-dependent acyltransferases 2321
Acetyl-CoA synthetase-like ACP-like 2120
CoA-dependent acyltransferases ACP-like 2120
"Winged helix" DNA-binding domain Periplasmic binding protein-like II 201
CoA-dependent acyltransferases Acetyl-CoA synthetase-like 2019
Phage tail proteins gp5 N-terminal domain-like 204
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 175
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 162
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 166
Phage tail proteins Phage tail proteins 153
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 1511
ACP-like ACP-like 1414
CheY-like C-terminal effector domain of the bipartite response regulators 121
gp5 N-terminal domain-like Phage fibre proteins 123
Actin-like ATPase domain Actin-like ATPase domain 125
Acetyl-CoA synthetase-like Acetyl-CoA synthetase-like 1111
Phage tail proteins Phage fibre proteins 112
Acetyl-CoA synthetase-like alpha/beta-Hydrolases 109
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 106
ACP-like alpha/beta-Hydrolases 109
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 106
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 92
CoA-dependent acyltransferases alpha/beta-Hydrolases 98
GroES-like NAD(P)-binding Rossmann-fold domains 93
Zinc beta-ribbon DNA primase core 94
lambda repressor-like DNA-binding domains Periplasmic binding protein-like I 81
P-loop containing nucleoside triphosphate hydrolases Translation proteins 87
Thiolase-like Thiolase-like 82
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 73
Homeodomain-like Ribonuclease H-like 72
PapD-like Periplasmic chaperone C-domain 72
Homeodomain-like Homeodomain-like 74
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 75
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Histidine-containing phosphotransfer domain, HPT domain 66
Thiolase-like ACP-like 66
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 66
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 62
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 63
NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains 66
Thiolase-like FabD/lysophospholipase-like 66
FabD/lysophospholipase-like ACP-like 66
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 55
PreATP-grasp domain Rudiment single hybrid motif 53
NAD(P)-binding Rossmann-fold domains ACP-like 55
Homeodomain-like Tetracyclin repressor-like, C-terminal domain 51
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 53
Homodimeric domain of signal transducing histidine kinase Histidine-containing phosphotransfer domain, HPT domain 55
PLP-binding barrel Alanine racemase C-terminal domain-like 52
FabD/lysophospholipase-like NAD(P)-binding Rossmann-fold domains 55
Homodimeric domain of signal transducing histidine kinase CheY-like 55
Nucleic acid-binding proteins Nucleic acid-binding proteins 54
Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase C-terminal domain-like 53
lambda integrase-like, N-terminal domain DNA breaking-rejoining enzymes 52
ACT-like ACT-like 54
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 53
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheY-like 55
Thiolase-like NAD(P)-binding Rossmann-fold domains 55
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 54
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 55
PurM N-terminal domain-like PurM C-terminal domain-like 52
CBS-domain pair FAD-binding/transporter-associated domain-like 41
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 42
NAD(P)-binding Rossmann-fold domains UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 41
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 44
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 42
Nucleic acid-binding proteins RuvA domain 2-like 44
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 43
Thiolase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 44
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein S5 domain 2-like 44
"Winged helix" DNA-binding domain Dimeric alpha+beta barrel 41
HlyD-like secretion proteins HlyD-like secretion proteins 41
Probable ACP-binding domain of malonyl-CoA ACP transacylase ACP-like 44
Phospholipase D/nuclease Phospholipase D/nuclease 44
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 41
CheY-like Histidine-containing phosphotransfer domain, HPT domain 44
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 42
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 43
"Winged helix" DNA-binding domain GntR ligand-binding domain-like 41
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 44
P-loop containing nucleoside triphosphate hydrolases MOP-like 41
Alpha-L RNA-binding motif Pseudouridine synthase 41
"Winged helix" DNA-binding domain NagB/RpiA/CoA transferase-like 41
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 43
Formate dehydrogenase/DMSO reductase, domains 1-3 ADC-like 42
6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 41
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 44
Composite domain of metallo-dependent hydrolases Metallo-dependent hydrolases 43
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 44
Thioredoxin-like GST C-terminal domain-like 41
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 43
FKBP-like Triger factor/SurA peptide-binding domain-like 33
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 32
Nucleotidyltransferase HD-domain/PDEase-like 32
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 32
Single hybrid motif CoA-dependent acyltransferases 33
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 31
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 33
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 33
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 32
MurCD N-terminal domain MurD-like peptide ligases, peptide-binding domain 31
PYP-like sensor domain (PAS domain) C-terminal effector domain of the bipartite response regulators 31
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 33
Probable ACP-binding domain of malonyl-CoA ACP transacylase NAD(P)-binding Rossmann-fold domains 33
MurCD N-terminal domain MurD-like peptide ligases, catalytic domain 31
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 33
Pheromone-binding domain of LuxR-like quorum-sensing transcription factors C-terminal effector domain of the bipartite response regulators 31
Lysozyme-like beta-lactamase/transpeptidase-like 33
EF-G C-terminal domain-like EF-G C-terminal domain-like 33
Nucleic acid-binding proteins Translation proteins SH3-like domain 32
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 33
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 32
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 31
Translation proteins EF-G C-terminal domain-like 33
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 32
Pentapeptide repeat-like Pentapeptide repeat-like 33
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 32
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 33
cAMP-binding domain-like "Winged helix" DNA-binding domain 31
Metallo-dependent phosphatases 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain 33
Class II aaRS and biotin synthetases Class II aaRS ABD-related 33
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 32
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB transmembrane domain 32
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 31
PYP-like sensor domain (PAS domain) Homeodomain-like 33
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 32
HAMP domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 33
6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 32
HAMP domain-like Homodimeric domain of signal transducing histidine kinase 33
HD-domain/PDEase-like ACT-like 32
Calcium ATPase, transduction domain A HAD-like 33
RmlC-like cupins Homeodomain-like 31
HAD-like Calcium ATPase, transmembrane domain M 33
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 32
Class I glutamine amidotransferase-like Homeodomain-like 31
S-adenosyl-L-methionine-dependent methyltransferases NAD(P)-binding Rossmann-fold domains 32
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB transmembrane domain 32
Nucleotidyltransferase ACT-like 32
beta-Roll beta-Roll 32
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 32
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
MetI-like MetI-like 22
Glucocorticoid receptor-like (DNA-binding domain) P-loop containing nucleoside triphosphate hydrolases 22
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 22
(Trans)glycosidases Chitinase insertion domain 22
Probable ACP-binding domain of malonyl-CoA ACP transacylase CoA-dependent acyltransferases 22
RCC1/BLIP-II RCC1/BLIP-II 22
Homeodomain-like SIS domain 21
Actin-like ATPase domain HD-domain/PDEase-like 21
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 21
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 22
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 22
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 21
GreA transcript cleavage protein, N-terminal domain FKBP-like 21
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 21
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 22
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 21
Nucleotidyltransferase TGS-like 21
Carbamate kinase-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 22
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 22
NAD(P)-binding Rossmann-fold domains alpha/beta-Hydrolases 22
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 21
Fibre shaft of virus attachment proteins Receptor-binding domain of short tail fibre protein gp12 22
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphohistidine domain 22
LeuD/IlvD-like Aconitase iron-sulfur domain 22
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 22
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 21
Aspartate receptor, ligand-binding domain Methyl-accepting chemotaxis protein (MCP) signaling domain 22
Nucleotidyltransferase Nucleotidyltransferase substrate binding subunit/domain 22
Trypsin-like serine proteases PDZ domain-like 22
Penicillin binding protein dimerisation domain beta-lactamase/transpeptidase-like 21
Hemopexin-like domain Calcium-mediated lectin 22
Class II aaRS and biotin synthetases ThrRS/AlaRS common domain 22
Riboflavin synthase domain-like Riboflavin synthase domain-like 21
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphoenolpyruvate/pyruvate domain 22
Thiolase-like CoA-dependent acyltransferases 22
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 21
Folate-binding domain Aminomethyltransferase beta-barrel domain 21
L30e-like alpha/beta knot 22
NAD(P)-binding Rossmann-fold domains ACT-like 22
Nucleotidylyl transferase Alpha-L RNA-binding motif 21
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 21
EF-G C-terminal domain-like Ribosomal protein S5 domain 2-like 22
Formyltransferase FMT C-terminal domain-like 22
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 21
NAD-binding domain of HMG-CoA reductase Substrate-binding domain of HMG-CoA reductase 22
HD-domain/PDEase-like TGS-like 21
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 21
beta-lactamase/transpeptidase-like Penicillin-binding protein associated domain 21
PK beta-barrel domain-like PK C-terminal domain-like 21
ClpP/crotonase 6-phosphogluconate dehydrogenase C-terminal domain-like 21
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 21
(Trans)glycosidases Glycosyl hydrolase domain 22
PDZ domain-like PDZ domain-like 22
Thiolase-like alpha/beta-Hydrolases 22
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 22
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 22
HAMP domain-like Histidine-containing phosphotransfer domain, HPT domain 22
Probable ACP-binding domain of malonyl-CoA ACP transacylase Acetyl-CoA synthetase-like 22
NAD(P)-binding Rossmann-fold domains CoA-dependent acyltransferases 22
2Fe-2S ferredoxin-like alpha-helical ferredoxin 21
Carbamate kinase-like ACT-like 22
alpha/beta-Hydrolases beta-Roll 22
ACP-like S-adenosyl-L-methionine-dependent methyltransferases 22
Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), C-terminal domain 22
P-loop containing nucleoside triphosphate hydrolases Restriction endonuclease-like 22
P-loop containing nucleoside triphosphate hydrolases ACT-like 22
(Trans)glycosidases E set domains 22
GroES-like GroES-like 21
Thiolase-like Acetyl-CoA synthetase-like 22
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 22
Probable ACP-binding domain of malonyl-CoA ACP transacylase alpha/beta-Hydrolases 22
GAF domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 22
CheY-like P-loop containing nucleoside triphosphate hydrolases 21
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 22
Carbamate kinase-like NAD(P)-binding Rossmann-fold domains 22
TGS-like ACT-like 21
Cupredoxins Cupredoxins 21
ClpP/crotonase ClpP/crotonase 22
HMA, heavy metal-associated domain HAD-like 22
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex CoA-dependent acyltransferases 22
PYP-like sensor domain (PAS domain) P-loop containing nucleoside triphosphate hydrolases 22
H-NS histone-like proteins H-NS histone-like proteins 22
NAD(P)-binding Rossmann-fold domains Siroheme synthase middle domains-like 22
R1 subunit of ribonucleotide reductase, N-terminal domain PFL-like glycyl radical enzymes 21
"Winged helix" DNA-binding domain Actin-like ATPase domain 21
Enolase N-terminal domain-like Enolase C-terminal domain-like 21
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 22
Zinc beta-ribbon Zinc beta-ribbon 22
Thioesterase/thiol ester dehydrase-isomerase Thioesterase/thiol ester dehydrase-isomerase 22
FabD/lysophospholipase-like CoA-dependent acyltransferases 22
FabD/lysophospholipase-like alpha/beta-Hydrolases 22
NAD(P)-binding Rossmann-fold domains Acetyl-CoA synthetase-like 22
tRNA-binding arm Class II aaRS and biotin synthetases 21
PYP-like sensor domain (PAS domain) CheY-like 22
PYP-like sensor domain (PAS domain) Histidine-containing phosphotransfer domain, HPT domain 22
HAMP domain-like CheY-like 22
DNA ligase/mRNA capping enzyme, catalytic domain RuvA domain 2-like 22
CoA-dependent acyltransferases S-adenosyl-L-methionine-dependent methyltransferases 22
Glutathione synthetase ATP-binding domain-like Succinyl-CoA synthetase domains 22
Nucleotidyltransferase Poly A polymerase C-terminal region-like 22
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
Glucose permease domain IIB Duplicated hybrid motif 22
S-adenosyl-L-methionine-dependent methyltransferases Acetyl-CoA synthetase-like 22
CheY-like Homeodomain-like 21
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 22
Single hybrid motif Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 22
ClpP/crotonase NAD(P)-binding Rossmann-fold domains 21
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 21
TrkA C-terminal domain-like TrkA C-terminal domain-like 22
FabD/lysophospholipase-like Acetyl-CoA synthetase-like 22
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 21
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 22
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 22
Sm-like ribonucleoproteins Mechanosensitive channel protein MscS (YggB), C-terminal domain 22
FMT C-terminal domain-like NAD(P)-binding Rossmann-fold domains 11
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 11
Thioredoxin-like TPR-like 11
Class II aaRS and biotin synthetases Translation proteins 11
GroEL-intermediate domain like GroEL apical domain-like 11
P-loop containing nucleoside triphosphate hydrolases C-terminal effector domain of the bipartite response regulators 11
FGAM synthase PurL, linker domain PurM C-terminal domain-like 11
Diaminopimelate epimerase-like Diaminopimelate epimerase-like 11
YVTN repeat-like/Quinoprotein amine dehydrogenase Calcium-dependent phosphotriesterase 11
PheT/TilS domain Class II aaRS and biotin synthetases 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 11
Chemotaxis receptor methyltransferase CheR, N-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 11
Cytidine deaminase-like Dihydrofolate reductase-like 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
Nucleic acid-binding proteins DNA helicase RuvA subunit, C-terminal domain 11
Class II aaRS and biotin synthetases C-terminal domain of transcriptional repressors 11
Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 11
Nucleic acid-binding proteins PheT/TilS domain 11
"Winged helix" DNA-binding domain Rhodanese/Cell cycle control phosphatase 11
Tryptophan synthase beta subunit-like PLP-dependent enzymes CBS-domain pair 11
Prokaryotic type I DNA topoisomerase Zinc beta-ribbon 11
Ribonuclease H-like DNA/RNA polymerases 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
Carbamate kinase-like PUA domain-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Alpha subunit of glutamate synthase, C-terminal domain 11
JAB1/MPN domain Cysteine proteinases 11
"Winged helix" DNA-binding domain PLP-dependent transferases 11
"Winged helix" DNA-binding domain MukF C-terminal domain-like 11
P-loop containing nucleoside triphosphate hydrolases TrpR-like 11
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 11
THUMP domain-like Adenine nucleotide alpha hydrolases-like 11
"Winged helix" DNA-binding domain C-terminal domain of transcriptional repressors 11
LysM domain LysM domain 11
Glutamyl tRNA-reductase catalytic, N-terminal domain NAD(P)-binding Rossmann-fold domains 11
Methylglyoxal synthase-like Cytidine deaminase-like 11
Translation proteins PRC-barrel domain 11
P-loop containing nucleoside triphosphate hydrolases Zn-binding ribosomal proteins 11
Glutathione synthetase ATP-binding domain-like Single hybrid motif 11
Substrate-binding domain of HMG-CoA reductase Protein kinase-like (PK-like) 11
Rho N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
Adenine nucleotide alpha hydrolases-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
MesJ substrate recognition domain-like PheT/TilS domain 11
beta-N-acetylhexosaminidase-like domain (Trans)glycosidases 11
Prokaryotic type KH domain (KH-domain type II) Rad51 N-terminal domain-like 11
Thiolase-like Thioesterase/thiol ester dehydrase-isomerase 11
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
Periplasmic binding protein-like II ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
"Winged helix" DNA-binding domain Chorismate lyase-like 11
Macro domain-like Zn-dependent exopeptidases 11
N-terminal domain of DnaB helicase P-loop containing nucleoside triphosphate hydrolases 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FMN-linked oxidoreductases 11
Arabinanase/levansucrase/invertase Concanavalin A-like lectins/glucanases 11
Translation proteins Translation proteins 11
Zinc beta-ribbon "Winged helix" DNA-binding domain 11
DNA clamp DNA clamp 11
Formyltransferase alpha/beta-Hydrolases 11
Trigger factor ribosome-binding domain FKBP-like 11
Cell wall binding repeat Bacterial adhesins 11
Hsp33 domain HSP33 redox switch-like 11
Band 7/SPFH domain Band 7/SPFH domain 11
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 11
Ribbon-helix-helix Replication modulator SeqA, C-terminal DNA-binding domain 11
Homodimeric domain of signal transducing histidine kinase CheW-like 11
PUA domain-like alpha/beta knot 11
Chorismate mutase II ACT-like 11
Periplasmic binding protein-like II CheY-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase HSP90 C-terminal domain 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
HRDC-like HRDC-like 11
N-terminal domain of bifunctional PutA protein FAD-linked oxidoreductase 11
Elongation factor Ts (EF-Ts), dimerisation domain Elongation factor Ts (EF-Ts), dimerisation domain 11
Periplasmic binding protein-like II Homodimeric domain of signal transducing histidine kinase 11
Chaperone J-domain HSC20 (HSCB), C-terminal oligomerisation domain 11
Glutathione synthetase ATP-binding domain-like Acyl-CoA N-acyltransferases (Nat) 11
Hemopexin-like domain Hemopexin-like domain 11
Pseudouridine synthase PUA domain-like 11
Adenine nucleotide alpha hydrolases-like PheT/TilS domain 11
(Trans)glycosidases Carbohydrate binding domain 11
GroEL equatorial domain-like GroEL-intermediate domain like 11
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain "Winged helix" DNA-binding domain 11
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 11
Chorismate mutase II Periplasmic binding protein-like II 11
Zinc beta-ribbon P-loop containing nucleoside triphosphate hydrolases 11
Metalloproteases ("zincins"), catalytic domain beta-Roll 11
HIT-like HIT-like 11
SacY-like RNA-binding domain PTS-regulatory domain, PRD 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheW-like 11
FabD/lysophospholipase-like S-adenosyl-L-methionine-dependent methyltransferases 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 11
PYP-like sensor domain (PAS domain) PYP-like sensor domain (PAS domain) 11
Zinc beta-ribbon DNA primase DnaG, C-terminal domain 11
PDZ domain-like ClpP/crotonase 11
P-loop containing nucleoside triphosphate hydrolases Isocitrate/Isopropylmalate dehydrogenase-like 11
Nucleic acid-binding proteins ArfGap/RecO-like zinc finger 11
Tex N-terminal region-like Ribonuclease H-like 11
Nitrite and sulphite reductase 4Fe-4S domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
GAF domain-like Phosphoenolpyruvate/pyruvate domain 11
E set domains Glycosyl hydrolase domain 11
P-loop containing nucleoside triphosphate hydrolases TGS-like 11
Nucleic acid-binding proteins Anticodon-binding domain of PheRS 11
Molybdenum cofactor biosynthesis proteins MoeA C-terminal domain-like 11
YegP-like YegP-like 11
Nucleic acid-binding proteins Rad51 N-terminal domain-like 11
NAD(P)-binding Rossmann-fold domains Acyl-CoA N-acyltransferases (Nat) 11
Nucleotidylyl transferase Riboflavin kinase-like 11
Periplasmic binding protein-like II Periplasmic binding protein-like II 11
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 11
CarD-like TRCF domain-like 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
Ribonuclease H-like HRDC-like 11
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 11
PHP14-like Phospholipase D/nuclease 11
4Fe-4S ferredoxins ADC-like 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
GIY-YIG endonuclease C-terminal UvrC-binding domain of UvrB 11
ACT-like Formyltransferase 11
S-adenosyl-L-methionine-dependent methyltransferases DNA breaking-rejoining enzymes 11
ALDH-like Dehydroquinate synthase-like 11
Aspartate carbamoyltransferase, Regulatory-chain, N-terminal domain Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain 11
MalF N-terminal region-like MetI-like 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
DNA primase core DNA primase DnaG, C-terminal domain 11
NTF2-like NTF2-like 11
5' to 3' exonuclease, C-terminal subdomain Ribonuclease H-like 11
S13-like H2TH domain Glucocorticoid receptor-like (DNA-binding domain) 11
N-acetylmuramoyl-L-alanine amidase-like PGBD-like 11
Ribonuclease H-like Nucleic acid-binding proteins 11
NAD(P)-binding Rossmann-fold domains Isocitrate/Isopropylmalate dehydrogenase-like 11
Nucleotidyltransferase substrate binding subunit/domain Nucleotidyltransferase substrate binding subunit/domain 11
Invasin/intimin cell-adhesion fragments Invasin/intimin cell-adhesion fragments 11
FAD/NAD(P)-binding domain Acyl-CoA dehydrogenase C-terminal domain-like 11
Translation proteins ThrRS/AlaRS common domain 11
MOSC N-terminal domain-like 2Fe-2S ferredoxin-like 11
Globin-like Ferredoxin reductase-like, C-terminal NADP-linked domain 11
Probable ACP-binding domain of malonyl-CoA ACP transacylase S-adenosyl-L-methionine-dependent methyltransferases 11
DNA methylase specificity domain DNA methylase specificity domain 11
Glutathione synthetase ATP-binding domain-like Phosphoenolpyruvate/pyruvate domain 11
Nqo5-like HydB/Nqo4-like 11
Chitinase insertion domain Carbohydrate binding domain 11
Flavoproteins Ferredoxin reductase-like, C-terminal NADP-linked domain 11
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 11
Periplasmic binding protein-like II Lysozyme-like 11
Cytochrome c oxidase subunit II-like, transmembrane region Cupredoxins 11
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases C-terminal UvrC-binding domain of UvrB 11
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 11
Aspartate/glutamate racemase Aspartate/glutamate racemase 11
NAD-binding domain of HMG-CoA reductase Protein kinase-like (PK-like) 11
PLP-dependent transferases Ornithine decarboxylase C-terminal domain 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
Nucleic acid-binding proteins Putative DNA-binding domain 11
Periplasmic binding protein-like II PYP-like sensor domain (PAS domain) 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
TolB, N-terminal domain Tricorn protease N-terminal domain 11
PLP-dependent transferases PLP-dependent transferases 11
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 11
Nucleotidylyl transferase tRNA-binding arm 11
P-loop containing nucleoside triphosphate hydrolases Lysozyme-like 11
PEP carboxykinase N-terminal domain PEP carboxykinase-like 11
"Winged helix" DNA-binding domain Ribokinase-like 11
Translation proteins Ribosomal protein S5 domain 2-like 11
"Winged helix" DNA-binding domain GAF domain-like 11
GAF domain-like Homodimeric domain of signal transducing histidine kinase 11
HAD-like Ribosomal protein S5 domain 2-like 11
Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Pyrimidine nucleoside phosphorylase C-terminal domain 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
Nucleotide-binding domain FAD/NAD(P)-binding domain 11
Carbohydrate-binding domain (Trans)glycosidases 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Nucleic acid-binding proteins 11
CheY-binding domain of CheA CheW-like 11
Nucleotidyltransferase substrate binding subunit/domain ACT-like 11
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 11
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 11
Nucleotidyltransferase substrate binding subunit/domain HD-domain/PDEase-like 11
Translation proteins Initiation factor IF2/eIF5b, domain 3 11
FAD-linked oxidases, C-terminal domain alpha-helical ferredoxin 11
Ribbon-helix-helix N-terminal domain of bifunctional PutA protein 11
Rudiment single hybrid motif Single hybrid motif 11
ACT-like Homeodomain-like 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
Siroheme synthase middle domains-like Tetrapyrrole methylase 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
Succinyl-CoA synthetase domains Succinyl-CoA synthetase domains 11
lambda repressor-like DNA-binding domains Nucleotidylyl transferase 11
Carbamate kinase-like Acyl-CoA N-acyltransferases (Nat) 11
N-terminal domain of bifunctional PutA protein ALDH-like 11
PurS-like PurM C-terminal domain-like 11
WD40 repeat-like WD40 repeat-like 11
Arabinanase/levansucrase/invertase Arabinanase/levansucrase/invertase 11
Methylated DNA-protein cysteine methyltransferase domain Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
TGS-like Class II aaRS ABD-related 11
Homo-oligomeric flavin-containing Cys decarboxylases, HFCD CoaB-like 11
NAD(P)-binding Rossmann-fold domains Tetrapyrrole methylase 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
S-adenosyl-L-methionine-dependent methyltransferases DNA methylase specificity domain 11
PHP domain-like Nucleic acid-binding proteins 11
Acetyl-CoA synthetase-like ADC synthase 11
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 11
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 11
HisI-like all-alpha NTP pyrophosphatases 11
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 11
PGBD-like L,D-transpeptidase catalytic domain-like 11
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 11
Nucleotidylyl transferase Nucleic acid-binding proteins 11
Rhodanese/Cell cycle control phosphatase Rhodanese/Cell cycle control phosphatase 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
Rad51 N-terminal domain-like Rad51 N-terminal domain-like 11
UROD/MetE-like UROD/MetE-like 11
Chaperone J-domain HSP40/DnaJ peptide-binding domain 11
NAD(P)-binding Rossmann-fold domains TrkA C-terminal domain-like 11
GAF domain-like Phosphohistidine domain 11
RuvA domain 2-like DNA helicase RuvA subunit, C-terminal domain 11
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 11
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 11
Carbon-nitrogen hydrolase Adenine nucleotide alpha hydrolases-like 11
Eukaryotic type KH-domain (KH-domain type I) Nucleic acid-binding proteins 11
Actin-crosslinking proteins Actin-crosslinking proteins 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
lambda repressor-like DNA-binding domains LexA/Signal peptidase 11
PIN domain-like Ribonuclease H-like 11
Ribosomal protein L6 Ribosomal protein L6 11
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 11
YbaK/ProRS associated domain Class II aaRS ABD-related 11
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 11
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 11
Cloacin translocation domain His-Me finger endonucleases 11
SGNH hydrolase Autotransporter 11
Ribonuclease H-like RuvA domain 2-like 11
lambda repressor-like DNA-binding domains P-loop containing nucleoside triphosphate hydrolases 11
ACT-like PYP-like sensor domain (PAS domain) 11
P-loop containing nucleoside triphosphate hydrolases HprK N-terminal domain-like 11
Putative DNA-binding domain Translation proteins 11
PheT/TilS domain Putative DNA-binding domain 11
Periplasmic binding protein-like II ACT-like 11
P-loop containing nucleoside triphosphate hydrolases Acyl-CoA N-acyltransferases (Nat) 11
Nitrite/Sulfite reductase N-terminal domain-like Nitrite/Sulfite reductase N-terminal domain-like 11
GroEL equatorial domain-like GroEL apical domain-like 11
Ribbon-helix-helix FAD-linked oxidoreductase 11
"Winged helix" DNA-binding domain Class II aaRS and biotin synthetases 11
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 11
Starch-binding domain-like (Trans)glycosidases 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleotidylyl transferase 11
Nqo1 FMN-binding domain-like alpha-helical ferredoxin 11
PurS-like FGAM synthase PurL, linker domain 11
2Fe-2S ferredoxin-like ADC-like 11
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Inosine monophosphate dehydrogenase (IMPDH) PLP-dependent transferases 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Nucleic acid-binding proteins 11
Succinyl-CoA synthetase domains Acyl-CoA N-acyltransferases (Nat) 11
Putative DNA-binding domain P-loop containing nucleoside triphosphate hydrolases 11
GIY-YIG endonuclease RuvA domain 2-like 11
Adenine nucleotide alpha hydrolases-like GAF domain-like 11
ALDH-like Acetyl-CoA synthetase-like 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 11
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 11
YajQ-like YajQ-like 11
2Fe-2S ferredoxin-like Riboflavin synthase domain-like 11
PurM C-terminal domain-like Class I glutamine amidotransferase-like 11
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 11
PPK N-terminal domain-like Phospholipase D/nuclease 11
Chorismate mutase II NAD(P)-binding Rossmann-fold domains 11
Periplasmic binding protein-like II Histidine-containing phosphotransfer domain, HPT domain 11
Leukotriene A4 hydrolase N-terminal domain Metalloproteases ("zincins"), catalytic domain 11
2Fe-2S ferredoxin-like Ferredoxin reductase-like, C-terminal NADP-linked domain 11
MoeA N-terminal region -like Molybdenum cofactor biosynthesis proteins 11
"Winged helix" DNA-binding domain C-terminal domain of arginine repressor 11
THUMP domain-like Rhodanese/Cell cycle control phosphatase 11
Adenine nucleotide alpha hydrolases-like Homodimeric domain of signal transducing histidine kinase 11
FAD-linked oxidoreductase ALDH-like 11
Thiamin diphosphate-binding fold (THDP-binding) Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
FliG FliG 11
Homeodomain-like Probable bacterial effector-binding domain 11
Aconitase B, N-terminal domain LeuD/IlvD-like 11
CheY-like Methylesterase CheB, C-terminal domain 11
YhbC-like, N-terminal domain YhbC-like, C-terminal domain 11
PMT central region-like EreA/ChaN-like 11
"Winged helix" DNA-binding domain S-adenosyl-L-methionine-dependent methyltransferases 11
Nucleic acid-binding proteins GAD domain-like 11
Prokaryotic type KH domain (KH-domain type II) Prokaryotic type KH domain (KH-domain type II) 11
CRISPR-associated protein CRISPR-associated protein 11
Isochorismatase-like hydrolases ACP-like 11
Ribosomal protein S5 domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
PTS-regulatory domain, PRD PTS-regulatory domain, PRD 11
DsbC/DsbG N-terminal domain-like Thioredoxin-like 11
MoeA N-terminal region -like MoeA C-terminal domain-like 11
Peptidase/esterase 'gauge' domain alpha/beta-Hydrolases 11
TTHA1013/TTHA0281-like lambda repressor-like DNA-binding domains 11
PH0987 N-terminal domain-like Cyclophilin-like 11
HesB-like domain Fe-S cluster assembly (FSCA) domain-like 11
FMN-binding split barrel UbiD C-terminal domain-like 11
beta-N-acetylhexosaminidase-like domain E set domains 11
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 11
Acid proteases PDZ domain-like 11
Thiolase-like S-adenosyl-L-methionine-dependent methyltransferases 11
E set domains E set domains 11
Formate/glycerate dehydrogenase catalytic domain-like ACT-like 11
FKBP-like FKBP-like 11
TGS-like ThrRS/AlaRS common domain 11
Chorismate mutase II 6-phosphogluconate dehydrogenase C-terminal domain-like 11
PPK N-terminal domain-like PHP14-like 11
Translation proteins "Winged helix" DNA-binding domain 11
Nqo1 FMN-binding domain-like Nqo1 middle domain-like 11
Nudix Nudix 11
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 11
S-adenosyl-L-methionine-dependent methyltransferases S-adenosyl-L-methionine-dependent methyltransferases 11
Histidine-containing phosphotransfer domain, HPT domain CheY-binding domain of CheA 11
CheY-binding domain of CheA ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 11
Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha) Thioredoxin-like 11
P-loop containing nucleoside triphosphate hydrolases CarD-like 11
"Winged helix" DNA-binding domain LexA/Signal peptidase 11
L9 N-domain-like Ribosomal protein L9 C-domain 11
Starch-binding domain-like E set domains 11
CbiG N-terminal domain-like CobE/GbiG C-terminal domain-like 11
PurM N-terminal domain-like Class I glutamine amidotransferase-like 11
Tryptophan synthase beta subunit-like PLP-dependent enzymes ACT-like 11
2Fe-2S ferredoxin-like Formate dehydrogenase/DMSO reductase, domains 1-3 11
all-alpha NTP pyrophosphatases all-alpha NTP pyrophosphatases 11
Carbohydrate-binding domain E set domains 11
Resolvase-like Homeodomain-like 11
RNase III domain-like dsRNA-binding domain-like 11
CheY-binding domain of CheA Homodimeric domain of signal transducing histidine kinase 11
P-loop containing nucleoside triphosphate hydrolases TPR-like 11
Adenine nucleotide alpha hydrolases-like Rhodanese/Cell cycle control phosphatase 11
TPR-like C-terminal effector domain of the bipartite response regulators 11
CBS-domain pair MgtE membrane domain-like 11
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 11
5' to 3' exonuclease, C-terminal subdomain DNA/RNA polymerases 11
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 11
GAF domain-like Homeodomain-like 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
TGS-like Class II aaRS and biotin synthetases 11
Nqo1 FMN-binding domain-like Nqo1C-terminal domain-like 11
PIN domain-like DNA/RNA polymerases 11
Fucose-specific lectin Fucose-specific lectin 11
Rho N-terminal domain-like Nucleic acid-binding proteins 11
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 11
Nqo1 middle domain-like Nqo1C-terminal domain-like 11
CheC-like Surface presentation of antigens (SPOA) 11
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleic acid-binding proteins 11
P-loop containing nucleoside triphosphate hydrolases beta-lactamase/transpeptidase-like 11
Periplasmic binding protein-like II GlnB-like 11
Transcription factor NusA, N-terminal domain Prokaryotic type KH domain (KH-domain type II) 11
S-adenosyl-L-methionine-dependent methyltransferases P-loop containing nucleoside triphosphate hydrolases 11
Globin-like Riboflavin synthase domain-like 11
Tex N-terminal region-like RuvA domain 2-like 11
N-terminal domain of MutM-like DNA repair proteins Glucocorticoid receptor-like (DNA-binding domain) 11
Clavaminate synthase-like S-adenosyl-L-methionine-dependent methyltransferases 11
Transcription factor NusA, N-terminal domain Rad51 N-terminal domain-like 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
PurS-like Class I glutamine amidotransferase-like 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
Fibre shaft of virus attachment proteins Fibre shaft of virus attachment proteins 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 11
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Transcription factor NusA, N-terminal domain Nucleic acid-binding proteins 11
PK beta-barrel domain-like 2Fe-2S ferredoxin-like 11
PreATP-grasp domain PreATP-grasp domain 11
PTS system fructose IIA component-like PTS IIb component 11
ACT-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 11
NagB/RpiA/CoA transferase-like D-ribose-5-phosphate isomerase (RpiA), lid domain 11
Barwin-like endoglucanases Sporulation related repeat 11
"Winged helix" DNA-binding domain MOP-like 11
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 11
Ribulose-phoshate binding barrel Ribulose-phoshate binding barrel 11
DNA-glycosylase Nudix 11
FucI/AraA N-terminal and middle domains FucI/AraA C-terminal domain-like 11
lambda repressor-like DNA-binding domains Cyanase C-terminal domain 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Eukaryotic type KH-domain (KH-domain type I) 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
Nucleic acid-binding proteins S-adenosyl-L-methionine-dependent methyltransferases 11
Formyltransferase CoA-dependent acyltransferases 11
Adenine nucleotide alpha hydrolases-like Adenine nucleotide alpha hydrolases-like 11
Putative DNA-binding domain Anticodon-binding domain of PheRS 11
Formyltransferase Acetyl-CoA synthetase-like 11
Lysozyme-like LysM domain 11
Ribbon-helix-helix ALDH-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 11
Putative DNA-binding domain Initiation factor IF2/eIF5b, domain 3 11
Aminoacid dehydrogenase-like, N-terminal domain Isocitrate/Isopropylmalate dehydrogenase-like 11
Ribosomal protein S5 domain 2-like HSP90 C-terminal domain 11
TrmE connector domain P-loop containing nucleoside triphosphate hydrolases 11
Nucleotidylyl transferase P-loop containing nucleoside triphosphate hydrolases 11
2Fe-2S ferredoxin-like 4Fe-4S ferredoxins 11
Carbohydrate-binding domain beta-N-acetylhexosaminidase-like domain 11
DnaK suppressor protein DksA, alpha-hairpin domain Glucocorticoid receptor-like (DNA-binding domain) 11
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 11
GAF domain-like Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 11
Cytidine deaminase-like Cytidine deaminase-like 11
FMN-linked oxidoreductases Nucleotide-binding domain 11
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 11
Cyclophilin-like Cyclophilin-like 11
Glycerol-3-phosphate (1)-acyltransferase Acetyl-CoA synthetase-like 11
Adenine nucleotide alpha hydrolases-like MesJ substrate recognition domain-like 11
Nucleotidyltransferase Nucleotidyltransferase 11
Acyl-CoA N-acyltransferases (Nat) Thioesterase/thiol ester dehydrase-isomerase 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 11
FMN-linked oxidoreductases FAD/NAD(P)-binding domain 11
alpha-helical ferredoxin Nucleotide-binding domain 11
RuvA domain 2-like BRCT domain 11
YdgH-like YdgH-like 11
FAD-binding/transporter-associated domain-like alpha-helical ferredoxin 11
NAD(P)-binding Rossmann-fold domains Glutamyl tRNA-reductase dimerization domain 11
OMPA-like OmpA-like 11
PheT/TilS domain Anticodon-binding domain of PheRS 11
PreATP-grasp domain Methylglyoxal synthase-like 11
HprK N-terminal domain-like Isocitrate/Isopropylmalate dehydrogenase-like 11
Histidine-containing phosphotransfer domain, HPT domain CheW-like 11
Epsilon subunit of F1F0-ATP synthase N-terminal domain Epsilon subunit of F1F0-ATP synthase C-terminal domain 11
Single hybrid motif Single hybrid motif 11
DeoB insert domain-like Alkaline phosphatase-like 11
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 11
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 11
Tex N-terminal region-like Nucleic acid-binding proteins 11
NAD(P)-binding Rossmann-fold domains Glutathione synthetase ATP-binding domain-like 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 11
Single hybrid motif ACP-like 11
Formyltransferase ACP-like 11
PreATP-grasp domain Single hybrid motif 11
Class II aaRS and biotin synthetases GAD domain-like 11
MOSC N-terminal domain-like PK beta-barrel domain-like 11
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 11
Bacterial muramidases Lysozyme-like 11
Starch-binding domain-like Glycosyl hydrolase domain 11
RuvA domain 2-like RuvA domain 2-like 11
HMA, heavy metal-associated domain HMA, heavy metal-associated domain 11
CheY-like CheY-like 11
Pectin lyase-like Pectin lyase-like 11
His-Me finger endonucleases Ada DNA repair protein, N-terminal domain (N-Ada 10) 11
Formyltransferase NAD(P)-binding Rossmann-fold domains 11
FGAM synthase PurL, linker domain PurM N-terminal domain-like 11
Flavoproteins Riboflavin synthase domain-like 11
FGAM synthase PurL, linker domain Class I glutamine amidotransferase-like 11
P-loop containing nucleoside triphosphate hydrolases HRDC-like 11
Glutamyl tRNA-reductase catalytic, N-terminal domain Glutamyl tRNA-reductase dimerization domain 11
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 11
FMN-linked oxidoreductases Alpha subunit of glutamate synthase, C-terminal domain 11
PurS-like PurM N-terminal domain-like 11
4Fe-4S ferredoxins Formate dehydrogenase/DMSO reductase, domains 1-3 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
PUA domain-like Ribosomal protein S5 domain 2-like 11
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 11
E set domains alpha/beta-Hydrolases 11
PrpR receptor domain-like P-loop containing nucleoside triphosphate hydrolases 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 11
S-adenosyl-L-methionine-dependent methyltransferases alpha/beta-Hydrolases 11
Nucleotidylyl transferase Ribosomal protein L25-like 11
RBP11-like subunits of RNA polymerase C-terminal domain of RNA polymerase alpha subunit 11
Aconitase B, N-terminal domain Aconitase iron-sulfur domain 11
FAD/NAD(P)-binding domain HI0933 insert domain-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Adenine nucleotide alpha hydrolases-like 11
Ribonuclease PH domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
FAD-binding/transporter-associated domain-like Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain 11
NTF2-like Sec-C motif 11
PrpR receptor domain-like Homeodomain-like 11
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Pyrimidine nucleoside phosphorylase C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases CBS-domain pair 11
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 11
ISP domain Bet v1-like 11
Class II aaRS and biotin synthetases YbaK/ProRS associated domain 11
Enolase C-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
Nucleic acid-binding proteins Prokaryotic type KH domain (KH-domain type II) 11
C-terminal UvrC-binding domain of UvrB RuvA domain 2-like 11
Type III secretion system domain Type III secretion system domain 11
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 11
Ribokinase-like Nucleotidylyl transferase 11
Nucleic acid-binding proteins BRCT domain 11
Class I glutamine amidotransferase-like ADC synthase 11

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