SUPERFAMILY 1.75 HMM library and genome assignments server

Domain combination pairs in Caulobacter crescentus NA1000

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

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Adjacent domain pairs graph

Graph of adjacent domain pairs.


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Domain combination pairs

634 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 4622
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheY-like 2511
Homodimeric domain of signal transducing histidine kinase CheY-like 2410
Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase C-terminal domain-like 213
Thioredoxin-like GST C-terminal domain-like 202
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 2011
Homeodomain-like Tetracyclin repressor-like, C-terminal domain 203
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 175
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 1714
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 1512
Composite domain of metallo-dependent hydrolases Metallo-dependent hydrolases 154
GroES-like NAD(P)-binding Rossmann-fold domains 133
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 133
PYP-like sensor domain (PAS domain) PYP-like sensor domain (PAS domain) 1211
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 124
Thiolase-like Thiolase-like 123
lambda repressor-like DNA-binding domains Periplasmic binding protein-like I 121
PYP-like sensor domain (PAS domain) CheY-like 118
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 117
"Winged helix" DNA-binding domain Periplasmic binding protein-like II 111
Actin-like ATPase domain Actin-like ATPase domain 104
CheY-like C-terminal effector domain of the bipartite response regulators 101
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 102
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 94
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 92
"Winged helix" DNA-binding domain GntR ligand-binding domain-like 91
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 85
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 82
"Winged helix" DNA-binding domain Dimeric alpha+beta barrel 82
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB transmembrane domain 71
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB transmembrane domain 71
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 71
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 71
Nucleotide cyclase EAL domain-like 73
HAMP domain-like Methyl-accepting chemotaxis protein (MCP) signaling domain 72
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 74
DPP6 N-terminal domain-like alpha/beta-Hydrolases 73
P-loop containing nucleoside triphosphate hydrolases Translation proteins 76
PreATP-grasp domain Rudiment single hybrid motif 74
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 71
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 71
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 66
(Trans)glycosidases Beta-D-glucan exohydrolase, C-terminal domain 62
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 63
(Trans)glycosidases Glycosyl hydrolase domain 64
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 62
TPR-like TPR-like 54
CheY-like Homeodomain-like 52
Alpha-L RNA-binding motif Pseudouridine synthase 52
ACT-like ACT-like 53
Lysozyme-like beta-lactamase/transpeptidase-like 53
Thioesterase/thiol ester dehydrase-isomerase Thioesterase/thiol ester dehydrase-isomerase 51
CheY-like P-loop containing nucleoside triphosphate hydrolases 52
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 53
GAF domain-like CheY-like 43
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 42
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 43
Trypsin-like serine proteases PDZ domain-like 43
Methylated DNA-protein cysteine methyltransferase domain Methylated DNA-protein cysteine methyltransferase, C-terminal domain 44
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 43
Rudiment single hybrid motif Single hybrid motif 43
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 44
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 43
ClpP/crotonase ClpP/crotonase 43
PYP-like sensor domain (PAS domain) EAL domain-like 42
PreATP-grasp domain Single hybrid motif 43
PYP-like sensor domain (PAS domain) Nucleotide cyclase 42
Enolase N-terminal domain-like Enolase C-terminal domain-like 41
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein S5 domain 2-like 44
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 41
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 44
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 41
Glutathione synthetase ATP-binding domain-like Single hybrid motif 43
Homeodomain-like Homeodomain-like 43
Nucleic acid-binding proteins Nucleic acid-binding proteins 44
Pentapeptide repeat-like Pentapeptide repeat-like 42
Triger factor/SurA peptide-binding domain-like FKBP-like 44
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 33
6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 32
Calcium ATPase, transduction domain A HAD-like 33
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 33
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 32
CheY-like CheY-like 32
GAF domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 32
PA domain Zn-dependent exopeptidases 31
PurM N-terminal domain-like PurM C-terminal domain-like 32
GAF domain-like PYP-like sensor domain (PAS domain) 32
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphohistidine domain 32
"Winged helix" DNA-binding domain Chorismate lyase-like 32
Macro domain-like Zn-dependent exopeptidases 31
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 33
PYP-like sensor domain (PAS domain) Methyl-accepting chemotaxis protein (MCP) signaling domain 33
Aspartate/glutamate racemase Aspartate/glutamate racemase 31
EF-G C-terminal domain-like EF-G C-terminal domain-like 33
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 31
CBS-domain pair FAD-binding/transporter-associated domain-like 31
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 33
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 32
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphoenolpyruvate/pyruvate domain 32
Homeodomain-like Ribonuclease H-like 31
GAF domain-like Homodimeric domain of signal transducing histidine kinase 32
ClpP/crotonase 6-phosphogluconate dehydrogenase C-terminal domain-like 32
L30e-like alpha/beta knot 31
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 33
Calcium ATPase, transmembrane domain M HAD-like 33
Translation proteins EF-G C-terminal domain-like 33
Arabinanase/levansucrase/invertase Concanavalin A-like lectins/glucanases 31
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 32
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 33
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 32
2Fe-2S ferredoxin-like CO dehydrogenase ISP C-domain like 32
cAMP-binding domain-like "Winged helix" DNA-binding domain 31
Chemotaxis receptor methyltransferase CheR, N-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 31
HAMP domain-like Homodimeric domain of signal transducing histidine kinase 32
Class II aaRS and biotin synthetases Class II aaRS ABD-related 33
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 31
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 32
PLP-binding barrel Alanine racemase C-terminal domain-like 33
ISP domain Bet v1-like 31
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 31
HAMP domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 32
Peptidase/esterase 'gauge' domain alpha/beta-Hydrolases 32
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 32
GroES-like GroES-like 21
Duplicated hybrid motif Phosphoenolpyruvate/pyruvate domain 21
Leukotriene A4 hydrolase N-terminal domain Metalloproteases ("zincins"), catalytic domain 22
NAD(P)-binding Rossmann-fold domains ACT-like 22
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 21
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 21
ThrRS/AlaRS common domain Class II aaRS and biotin synthetases 22
Sm-like ribonucleoproteins Mechanosensitive channel protein MscS (YggB), C-terminal domain 22
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 22
PDZ domain-like PDZ domain-like 22
OMPA-like OmpA-like 21
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheW-like 22
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 21
HPr-like Phosphoenolpyruvate/pyruvate domain 21
Globin-like Methyl-accepting chemotaxis protein (MCP) signaling domain 22
Homodimeric domain of signal transducing histidine kinase CheW-like 22
Histidine-containing phosphotransfer domain, HPT domain CheW-like 22
Cytochrome c oxidase subunit II-like, transmembrane region Cupredoxins 22
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex CoA-dependent acyltransferases 21
Single hybrid motif CoA-dependent acyltransferases 21
ClpP/crotonase NAD(P)-binding Rossmann-fold domains 21
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 22
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 22
Single hybrid motif Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 21
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 22
Nucleotidyltransferase Nucleotidyltransferase substrate binding subunit/domain 22
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 21
Thioredoxin-like Thioredoxin-like 22
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 21
"Winged helix" DNA-binding domain GAF domain-like 21
Duplicated hybrid motif HPr-like 21
Nucleic acid-binding proteins RuvA domain 2-like 22
MurCD N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 22
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
MurCD N-terminal domain MurD-like peptide ligases, catalytic domain 21
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 21
Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), C-terminal domain 22
Nucleotidyltransferase Poly A polymerase C-terminal region-like 22
HPr-like Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 21
CheY-like Nucleotide cyclase 21
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 22
Phospholipase D/nuclease Phospholipase D/nuclease 22
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 22
P-loop containing nucleoside triphosphate hydrolases MOP-like 21
Duplicated hybrid motif Phosphohistidine domain 21
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 22
tRNA-binding arm Class II aaRS and biotin synthetases 22
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 22
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 22
Translation proteins SH3-like domain Nucleic acid-binding proteins 22
Nucleotidyltransferase ACT-like 22
beta-N-acetylhexosaminidase-like domain (Trans)glycosidases 22
Galactose-binding domain-like SGNH hydrolase 21
NAD(P)-binding Rossmann-fold domains UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 21
Formate dehydrogenase/DMSO reductase, domains 1-3 ADC-like 22
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 22
Duplicated hybrid motif Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 21
Molybdenum cofactor-binding domain Molybdenum cofactor-binding domain 21
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 22
NAD(P)-binding Rossmann-fold domains Isocitrate/Isopropylmalate dehydrogenase-like 21
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 22
FAD/NAD(P)-binding domain HI0933 insert domain-like 21
Glucose permease domain IIB Glucose permease domain IIB 21
Penicillin binding protein dimerisation domain beta-lactamase/transpeptidase-like 22
Nucleotide-binding domain FAD-linked reductases, C-terminal domain 21
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 22
Cobalamin (vitamin B12)-dependent enzymes Cobalamin (vitamin B12)-binding domain 21
Chaperone J-domain HSP40/DnaJ peptide-binding domain 22
Aminoacid dehydrogenase-like, N-terminal domain Isocitrate/Isopropylmalate dehydrogenase-like 21
Class I glutamine amidotransferase-like Homeodomain-like 21
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 22
HPr-like Phosphohistidine domain 21
Histidine-containing phosphotransfer domain, HPT domain Homodimeric domain of signal transducing histidine kinase 22
CheY-like Methylesterase CheB, C-terminal domain 22
alpha/beta-Hydrolases Galactose-binding domain-like 21
Histidine-containing phosphotransfer domain, HPT domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 22
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 22
Bacterial muramidases Lysozyme-like 21
6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 21
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 21
Cyclophilin-like PH0987 N-terminal domain-like 11
PIN domain-like Ribonuclease H-like 11
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 11
GroEL equatorial domain-like GroEL apical domain-like 11
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 11
Carbamate kinase-like PUA domain-like 11
CBS-domain pair ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
beta-lactamase/transpeptidase-like TPR-like 11
Nucleotidyltransferase substrate binding subunit/domain Nucleotidyltransferase substrate binding subunit/domain 11
Homeodomain-like SIS domain 11
Trigger factor ribosome-binding domain FKBP-like 11
Nitrite/Sulfite reductase N-terminal domain-like Nitrite/Sulfite reductase N-terminal domain-like 11
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 11
Riboflavin synthase domain-like Riboflavin synthase domain-like 11
Nitrite and sulphite reductase 4Fe-4S domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
Sigma3 and sigma4 domains of RNA polymerase sigma factors TPR-like 11
MgtE N-terminal domain-like MgtE membrane domain-like 11
GreA transcript cleavage protein, N-terminal domain FKBP-like 11
Nucleotidylyl transferase Riboflavin kinase-like 11
Translation proteins Ribosomal protein S5 domain 2-like 11
HCP-like PGBD-like 11
S13-like H2TH domain Glucocorticoid receptor-like (DNA-binding domain) 11
PreATP-grasp domain Methylglyoxal synthase-like 11
Cytidine deaminase-like Dihydrofolate reductase-like 11
CBS-domain pair PYP-like sensor domain (PAS domain) 11
Regulatory protein AraC Homeodomain-like 11
Galactose mutarotase-like Glycosyl hydrolase domain 11
Putative DNA-binding domain Anticodon-binding domain of PheRS 11
Starch-binding domain-like Porins 11
RuvA domain 2-like DNA helicase RuvA subunit, C-terminal domain 11
Translation proteins Initiation factor IF2/eIF5b, domain 3 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
DNA ligase/mRNA capping enzyme, catalytic domain RuvA domain 2-like 11
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 11
Thioredoxin-like FAD/NAD(P)-binding domain 11
Alpha-L RNA-binding motif S-adenosyl-L-methionine-dependent methyltransferases 11
HCP-like HCP-like 11
CBS-domain pair CheY-like 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
Nudix "Winged helix" DNA-binding domain 11
Methionine synthase domain Methionine synthase activation domain-like 11
"Winged helix" DNA-binding domain S-adenosyl-L-methionine-dependent methyltransferases 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleotidylyl transferase 11
Diaminopimelate epimerase-like Diaminopimelate epimerase-like 11
TrmE connector domain P-loop containing nucleoside triphosphate hydrolases 11
CBS-domain pair EAL domain-like 11
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 11
GIY-YIG endonuclease RuvA domain 2-like 11
lambda repressor-like DNA-binding domains RmlC-like cupins 11
Carbamate kinase-like ACT-like 11
FAD-binding/transporter-associated domain-like Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain 11
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
(Trans)glycosidases Galactose-binding domain-like 11
Sigma3 and sigma4 domains of RNA polymerase sigma factors CheY-like 11
RNase III domain-like dsRNA-binding domain-like 11
Tricorn protease N-terminal domain Metallo-dependent hydrolases 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
TPR-like S-adenosyl-L-methionine-dependent methyltransferases 11
N-terminal domain of bifunctional PutA protein FAD-linked oxidoreductase 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) Methylated DNA-protein cysteine methyltransferase domain 11
Hsp33 domain HSP33 redox switch-like 11
all-alpha NTP pyrophosphatases all-alpha NTP pyrophosphatases 11
P-loop containing nucleoside triphosphate hydrolases ACT-like 11
S-adenosyl-L-methionine-dependent methyltransferases S-adenosyl-L-methionine-dependent methyltransferases 11
NAD(P)-binding Rossmann-fold domains Serine metabolism enzymes domain 11
P-loop containing nucleoside triphosphate hydrolases Hypothetical protein YjiA, C-terminal domain 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 11
Adenine nucleotide alpha hydrolases-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
N-terminal domain of MutM-like DNA repair proteins Glucocorticoid receptor-like (DNA-binding domain) 11
FMN-binding split barrel UbiD C-terminal domain-like 11
Heme-dependent peroxidases Heme-dependent peroxidases 11
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 11
EspE N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
Translation proteins Translation proteins 11
Cyclophilin-like Single hybrid motif 11
Carboxypeptidase regulatory domain-like Porins 11
DPP6 N-terminal domain-like Composite domain of metallo-dependent hydrolases 11
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 11
RuvA domain 2-like RuvA domain 2-like 11
Homeodomain-like Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
Transcription factor NusA, N-terminal domain Prokaryotic type KH domain (KH-domain type II) 11
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 11
2Fe-2S ferredoxin-like alpha-helical ferredoxin 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
Transcription factor NusA, N-terminal domain Nucleic acid-binding proteins 11
Nucleotide-diphospho-sugar transferases Guanosine diphospho-D-mannose pyrophosphorylase/mannose-6-phosphate isomerase linker domain 11
Protein kinase-like (PK-like) P-loop containing nucleoside triphosphate hydrolases 11
Sigma3 and sigma4 domains of RNA polymerase sigma factors NTF2-like 11
Homeodomain-like Methylated DNA-protein cysteine methyltransferase domain 11
PheT/TilS domain Class II aaRS and biotin synthetases 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
Nucleotidyltransferase Nucleotidyltransferase 11
CBS-domain pair Nucleotide cyclase 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
Molybdenum cofactor biosynthesis proteins MoeA C-terminal domain-like 11
Metallo-hydrolase/oxidoreductase SCP-like 11
Dimeric alpha+beta barrel Sigma2 domain of RNA polymerase sigma factors 11
Rho N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
PH0987 N-terminal domain-like Single hybrid motif 11
Pili subunits GspK insert domain-like 11
PPK N-terminal domain-like PHP14-like 11
GspK insert domain-like GspK insert domain-like 11
Rhodanese/Cell cycle control phosphatase Rhodanese/Cell cycle control phosphatase 11
Cobalamin (vitamin B12)-binding domain Methionine synthase activation domain-like 11
2Fe-2S ferredoxin-like CO dehydrogenase flavoprotein C-terminal domain-like 11
NTF2-like NTF2-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FMN-linked oxidoreductases 11
Eukaryotic type KH-domain (KH-domain type I) P-loop containing nucleoside triphosphate hydrolases 11
Formyltransferase FMT C-terminal domain-like 11
FAD-linked reductases, C-terminal domain 4Fe-4S ferredoxins 11
Transmembrane di-heme cytochromes a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 11
DNA clamp DNA clamp 11
Radical SAM enzymes RuvA domain 2-like 11
P-loop containing nucleoside triphosphate hydrolases Smc hinge domain 11
2Fe-2S ferredoxin-like FAD-binding/transporter-associated domain-like 11
Quinoprotein alcohol dehydrogenase-like Quinoprotein alcohol dehydrogenase-like 11
Nucleic acid-binding proteins BRCT domain 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
Tryptophan synthase beta subunit-like PLP-dependent enzymes ACT-like 11
GIY-YIG endonuclease C-terminal UvrC-binding domain of UvrB 11
Galactose mutarotase-like (Trans)glycosidases 11
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 11
PIN domain-like DNA/RNA polymerases 11
Actin-like ATPase domain HD-domain/PDEase-like 11
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 11
dUTPase-like dUTPase-like 11
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 11
PK beta-barrel domain-like PK C-terminal domain-like 11
RBP11-like subunits of RNA polymerase C-terminal domain of RNA polymerase alpha subunit 11
TGS-like Class II aaRS ABD-related 11
lambda integrase-like, N-terminal domain DNA breaking-rejoining enzymes 11
2Fe-2S ferredoxin-like Formate dehydrogenase/DMSO reductase, domains 1-3 11
NAD(P)-binding Rossmann-fold domains Tetrapyrrole methylase 11
Riboflavin synthase domain-like 2Fe-2S ferredoxin-like 11
GAF domain-like Phosphoenolpyruvate/pyruvate domain 11
Class II aaRS and biotin synthetases GAD domain-like 11
UROD/MetE-like UROD/MetE-like 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
Serine metabolism enzymes domain ACT-like 11
Thiolase-like Nucleic acid-binding proteins 11
TGS-like ACT-like 11
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
Toll/Interleukin receptor TIR domain TPR-like 11
Translation proteins PRC-barrel domain 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 11
Translation proteins ThrRS/AlaRS common domain 11
Carbon-nitrogen hydrolase Adenine nucleotide alpha hydrolases-like 11
4Fe-4S ferredoxins Formate dehydrogenase/DMSO reductase, domains 1-3 11
P-loop containing nucleoside triphosphate hydrolases Restriction endonuclease-like 11
Galactose mutarotase-like Anthrax protective antigen 11
Glutathione synthetase ATP-binding domain-like PH0987 N-terminal domain-like 11
NAD(P)-binding Rossmann-fold domains TrkA C-terminal domain-like 11
TTHA1013/TTHA0281-like Ribbon-helix-helix 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
Cyclophilin-like Cyclophilin-like 11
DPP6 N-terminal domain-like Metallo-dependent hydrolases 11
Methylglyoxal synthase-like Cytidine deaminase-like 11
Ribokinase-like Nucleotidylyl transferase 11
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 11
NAD(P)-binding Rossmann-fold domains Siroheme synthase middle domains-like 11
PheT/TilS domain Putative DNA-binding domain 11
Ferredoxin reductase-like, C-terminal NADP-linked domain 2Fe-2S ferredoxin-like 11
alpha/beta-Hydrolases AhpD-like 11
Thermostable phytase (3-phytase) Thermostable phytase (3-phytase) 11
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 11
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 11
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 11
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 11
ACT-like Formyltransferase 11
P-loop containing nucleoside triphosphate hydrolases C-terminal UvrC-binding domain of UvrB 11
TerB-like Chaperone J-domain 11
Periplasmic binding protein-like II ACT-like 11
CO dehydrogenase ISP C-domain like FAD-binding/transporter-associated domain-like 11
Glutamine synthetase/guanido kinase GatB/YqeY motif 11
FAD-linked oxidoreductase ALDH-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 11
Rudiment single hybrid motif PH0987 N-terminal domain-like 11
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 11
Adenine nucleotide alpha hydrolases-like Adenine nucleotide alpha hydrolases-like 11
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 11
FAD/NAD(P)-binding domain Nitrite and sulphite reductase 4Fe-4S domain-like 11
Transcription factor NusA, N-terminal domain Rad51 N-terminal domain-like 11
PreATP-grasp domain PreATP-grasp domain 11
Thiamin diphosphate-binding fold (THDP-binding) Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 11
Sigma2 domain of RNA polymerase sigma factors NTF2-like 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
DNA methylase specificity domain DNA methylase specificity domain 11
Origin of replication-binding domain, RBD-like P-loop containing nucleoside triphosphate hydrolases 11
Folate-binding domain Aminomethyltransferase beta-barrel domain 11
EF-G C-terminal domain-like Ribosomal protein S5 domain 2-like 11
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 11
CheW-like CheW-like 11
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 11
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 11
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 11
Flagellar hook protein flgE Flagellar hook protein flgE 11
Barwin-like endoglucanases Sporulation related repeat 11
Single hybrid motif TK C-terminal domain-like 11
5' to 3' exonuclease, C-terminal subdomain Ribonuclease H-like 11
TPR-like UDP-Glycosyltransferase/glycogen phosphorylase 11
Zn-dependent exopeptidases Fibronectin type III 11
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 11
Formate/glycerate dehydrogenase catalytic domain-like Serine metabolism enzymes domain 11
Rho N-terminal domain-like Nucleic acid-binding proteins 11
PUA domain-like alpha/beta knot 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
Glutathione synthetase ATP-binding domain-like Succinyl-CoA synthetase domains 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
YjeF N-terminal domain-like Ribokinase-like 11
Glutathione synthetase ATP-binding domain-like Cyclophilin-like 11
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 11
Aconitase iron-sulfur domain LeuD/IlvD-like 11
Nucleotidylyl transferase tRNA-binding arm 11
TGS-like ThrRS/AlaRS common domain 11
Cryptochrome/photolyase, N-terminal domain Cryptochrome/photolyase FAD-binding domain 11
GAF domain-like Phosphohistidine domain 11
L9 N-domain-like Ribosomal protein L9 C-domain 11
PUA domain-like Ribosomal protein S5 domain 2-like 11
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 11
Cytochrome c Cytochrome c 11
FAD/NAD(P)-binding domain Nitrite/Sulfite reductase N-terminal domain-like 11
PreATP-grasp domain PH0987 N-terminal domain-like 11
(Trans)glycosidases Anthrax protective antigen 11
P-loop containing nucleoside triphosphate hydrolases TrpR-like 11
CO dehydrogenase molybdoprotein N-domain-like Molybdenum cofactor-binding domain 11
Nucleotidyltransferase substrate binding subunit/domain Poly A polymerase C-terminal region-like 11
GroEL equatorial domain-like GroEL-intermediate domain like 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
TPR-like Homodimeric domain of signal transducing histidine kinase 11
Eukaryotic type KH-domain (KH-domain type I) Nucleic acid-binding proteins 11
Methionine synthase domain Cobalamin (vitamin B12)-binding domain 11
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 11
FliG FliG 11
Aldolase AFP III-like domain 11
Trypsin-like serine proteases His-Me finger endonucleases 11
"Winged helix" DNA-binding domain MOP-like 11
Nucleotide-diphospho-sugar transferases IpsF-like 11
Nqo1 middle domain-like Nqo1C-terminal domain-like 11
Cupredoxins Cupredoxins 11
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 11
"Winged helix" DNA-binding domain LexA/Signal peptidase 11
Nucleic acid-binding proteins S-adenosyl-L-methionine-dependent methyltransferases 11
TPR-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
YlxR-like L30e-like 11
Clc chloride channel CBS-domain pair 11
Homeodomain-like Probable bacterial effector-binding domain 11
Dihydropteroate synthetase-like Cobalamin (vitamin B12)-binding domain 11
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 11
CBS-domain pair MgtE membrane domain-like 11
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 11
Adenine nucleotide alpha hydrolases-like DHS-like NAD/FAD-binding domain 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 11
LysM domain LysM domain 11
P-loop containing nucleoside triphosphate hydrolases TGS-like 11
HMA, heavy metal-associated domain HAD-like 11
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 11
Dihydropteroate synthetase-like Methionine synthase domain 11
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 11
Sigma2 domain of RNA polymerase sigma factors TPR-like 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain ACT-like 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Nucleic acid-binding proteins 11
LysM domain Duplicated hybrid motif 11
R1 subunit of ribonucleotide reductase, N-terminal domain PFL-like glycyl radical enzymes 11
Rudiment single hybrid motif Cyclophilin-like 11
Nucleic acid-binding proteins Rad51 N-terminal domain-like 11
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 11
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 11
beta-Roll beta-Roll 11
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 11
CheC-like Surface presentation of antigens (SPOA) 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
Flavoproteins Riboflavin synthase domain-like 11
Class II aaRS and biotin synthetases Translation proteins 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 11
2Fe-2S ferredoxin-like 4Fe-4S ferredoxins 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
TPR-like CheY-like 11
alpha-helical ferredoxin Nucleotide-binding domain 11
Nucleotidyltransferase TGS-like 11
DNA-glycosylase Nudix 11
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 11
Ribonuclease H-like DNA/RNA polymerases 11
FKBP-like FKBP-like 11
Dihydropteroate synthetase-like Methionine synthase activation domain-like 11
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Zinc beta-ribbon DNA primase core 11
RuvA domain 2-like BRCT domain 11
Nucleic acid-binding proteins Anticodon-binding domain of PheRS 11
Anthrax protective antigen Glycosyl hydrolase domain 11
PPK N-terminal domain-like Phospholipase D/nuclease 11
HRDC-like HRDC-like 11
Tricorn protease N-terminal domain DPP6 N-terminal domain-like 11
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
Thioredoxin-like TPR-like 11
FAD/NAD(P)-binding domain 4Fe-4S ferredoxins 11
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 11
Nucleotidyltransferase substrate binding subunit/domain ACT-like 11
Nucleic acid-binding proteins ArfGap/RecO-like zinc finger 11
Flavoproteins Ferredoxin reductase-like, C-terminal NADP-linked domain 11
Tricorn protease N-terminal domain Composite domain of metallo-dependent hydrolases 11
Putative DNA-binding domain Antibiotic binding domain of TipA-like multidrug resistance regulators 11
TGS-like Class II aaRS and biotin synthetases 11
PreATP-grasp domain Cyclophilin-like 11
MgtE N-terminal domain-like CBS-domain pair 11
Beta-D-glucan exohydrolase, C-terminal domain Galactose-binding domain-like 11
"Winged helix" DNA-binding domain HRDC-like 11
HD-domain/PDEase-like Nucleotidyltransferase 11
Prokaryotic type KH domain (KH-domain type II) Rad51 N-terminal domain-like 11
Dimeric alpha+beta barrel Sigma3 and sigma4 domains of RNA polymerase sigma factors 11
S-adenosyl-L-methionine-dependent methyltransferases FAD/NAD(P)-binding domain 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 11
Ribonuclease H-like HRDC-like 11
C-terminal UvrC-binding domain of UvrB RuvA domain 2-like 11
PGBD-like L,D-transpeptidase catalytic domain-like 11
Nqo1 FMN-binding domain-like Nqo1 middle domain-like 11
Glutathione synthetase ATP-binding domain-like ClpP/crotonase 11
S-adenosyl-L-methionine-dependent methyltransferases FAD-linked reductases, C-terminal domain 11
CO dehydrogenase ISP C-domain like CO dehydrogenase flavoprotein C-terminal domain-like 11
Single hybrid motif ClpP/crotonase 11
Voltage-gated potassium channels TrkA C-terminal domain-like 11
Glucocorticoid receptor-like (DNA-binding domain) P-loop containing nucleoside triphosphate hydrolases 11
5' to 3' exonuclease, C-terminal subdomain DNA/RNA polymerases 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 11
Galactose-binding domain-like Six-hairpin glycosidases 11
Domain of the SRP/SRP receptor G-proteins Signal peptide-binding domain 11
Fe-S cluster assembly (FSCA) domain-like P-loop containing nucleoside triphosphate hydrolases 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
Nucleic acid-binding proteins DNA helicase RuvA subunit, C-terminal domain 11
Ribbon-helix-helix ACT-like 11
HD-domain/PDEase-like ACT-like 11
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 11
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
N-acetylmuramoyl-L-alanine amidase-like PGBD-like 11
MFS general substrate transporter MFS general substrate transporter 11
CarD-like TRCF domain-like 11
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 11
Nucleotide cyclase Nucleotide cyclase 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Eukaryotic type KH-domain (KH-domain type I) 11
MOP-like MOP-like 11
Galactose mutarotase-like Six-hairpin glycosidases 11
Prokaryotic type I DNA topoisomerase Zinc beta-ribbon 11
GAF domain-like Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 11
MoeA N-terminal region -like MoeA C-terminal domain-like 11
N-terminal domain of DnaB helicase P-loop containing nucleoside triphosphate hydrolases 11
N-terminal domain of bifunctional PutA protein ALDH-like 11
E set domains Six-hairpin glycosidases 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
PDZ domain-like ClpP/crotonase 11
Glutathione synthetase ATP-binding domain-like Phosphoenolpyruvate/pyruvate domain 11
Homo-oligomeric flavin-containing Cys decarboxylases, HFCD CoaB-like 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
PreATP-grasp domain ClpP/crotonase 11
Single hybrid motif Thiamin diphosphate-binding fold (THDP-binding) 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
Ribosomal protein S5 domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Alpha subunit of glutamate synthase, C-terminal domain 11
ParB/Sulfiredoxin KorB DNA-binding domain-like 11
Metalloproteases ("zincins"), catalytic domain PDZ domain-like 11
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
TPR-like P-loop containing nucleoside triphosphate hydrolases 11
Lysozyme-like PGBD-like 11
P-loop containing nucleoside triphosphate hydrolases HRDC-like 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 11
PheT/TilS domain Anticodon-binding domain of PheRS 11
NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains 11
FAD-binding/transporter-associated domain-like CO dehydrogenase flavoprotein C-terminal domain-like 11
YhbC-like, N-terminal domain YhbC-like, C-terminal domain 11
Nucleic acid-binding proteins Prokaryotic type KH domain (KH-domain type II) 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 11
Nucleic acid-binding proteins Putative DNA-binding domain 11
Nqo1 FMN-binding domain-like Nqo1C-terminal domain-like 11
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 11
Metalloproteases ("zincins"), catalytic domain beta-Roll 11
Nucleic acid-binding proteins GAD domain-like 11
HAMP domain-like PYP-like sensor domain (PAS domain) 11
MoeA N-terminal region -like Molybdenum cofactor biosynthesis proteins 11
Ribonuclease PH domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
Protein prenylyltransferase UDP-Glycosyltransferase/glycogen phosphorylase 11
Class II aaRS and biotin synthetases C-terminal domain of transcriptional repressors 11
Voltage-gated potassium channels NAD(P)-binding Rossmann-fold domains 11
NagB/RpiA/CoA transferase-like D-ribose-5-phosphate isomerase (RpiA), lid domain 11
HlyD-like secretion proteins HlyD-like secretion proteins 11
cAMP-binding domain-like FabD/lysophospholipase-like 11
Prokaryotic type KH domain (KH-domain type II) Prokaryotic type KH domain (KH-domain type II) 11
P-loop containing nucleoside triphosphate hydrolases CarD-like 11
"Winged helix" DNA-binding domain PLP-dependent transferases 11
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 11
GroEL-intermediate domain like GroEL apical domain-like 11
Transmembrane di-heme cytochromes YceI-like 11
Elongation factor Ts (EF-Ts), dimerisation domain Elongation factor Ts (EF-Ts), dimerisation domain 11
Nucleic acid-binding proteins PheT/TilS domain 11
DnaK suppressor protein DksA, alpha-hairpin domain Glucocorticoid receptor-like (DNA-binding domain) 11
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 11
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 11
Siroheme synthase middle domains-like Tetrapyrrole methylase 11
PHP14-like Phospholipase D/nuclease 11
HD-domain/PDEase-like TGS-like 11
Dihydropteroate synthetase-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
Ribosomal protein L6 Ribosomal protein L6 11
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 11
Adenine nucleotide alpha hydrolases-like Homodimeric domain of signal transducing histidine kinase 11
NagB/RpiA/CoA transferase-like NagB/RpiA/CoA transferase-like 11
Poly A polymerase C-terminal region-like ACT-like 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
TPR-like Acyl-CoA N-acyltransferases (Nat) 11
"Winged helix" DNA-binding domain Actin-like ATPase domain 11
YrdC/RibB RibA-like 11
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
Hypothetical protein SAV1430 Fe-S cluster assembly (FSCA) domain-like 11
Rudiment single hybrid motif ClpP/crotonase 11
FMN-linked oxidoreductases Alpha subunit of glutamate synthase, C-terminal domain 11
Formate/glycerate dehydrogenase catalytic domain-like ACT-like 11
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 11
GAF domain-like Homeodomain-like 11

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