SUPERFAMILY 1.75 HMM library and genome assignments server

Domain combination pairs in Roseobacter denitrificans OCh 114

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

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Adjacent domain pairs graph

Graph of adjacent domain pairs.


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Domain combination pairs

635 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
P-loop containing nucleoside triphosphate hydrolases MOP-like 301
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 2511
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 246
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 234
"Winged helix" DNA-binding domain Periplasmic binding protein-like II 222
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 224
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 2114
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 195
Actin-like ATPase domain Actin-like ATPase domain 175
Metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 167
GroES-like NAD(P)-binding Rossmann-fold domains 163
"Winged helix" DNA-binding domain GntR ligand-binding domain-like 151
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 154
Folate-binding domain Aminomethyltransferase beta-barrel domain 144
Thioredoxin-like GST C-terminal domain-like 131
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 135
Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase C-terminal domain-like 133
CheY-like C-terminal effector domain of the bipartite response regulators 122
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 113
FAD/NAD(P)-binding domain Folate-binding domain 102
beta-Roll beta-Roll 109
FAD/NAD(P)-binding domain Aminomethyltransferase beta-barrel domain 102
lambda repressor-like DNA-binding domains Periplasmic binding protein-like I 91
Homeodomain-like Tetracyclin repressor-like, C-terminal domain 91
Sm-like ribonucleoproteins Mechanosensitive channel protein MscS (YggB), C-terminal domain 93
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 95
"Winged helix" DNA-binding domain Dimeric alpha+beta barrel 81
cAMP-binding domain-like "Winged helix" DNA-binding domain 81
Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), C-terminal domain 82
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 82
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 82
MetI-like MetI-like 83
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 71
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 73
FAD-linked reductases, C-terminal domain Aminomethyltransferase beta-barrel domain 71
Thiolase-like Thiolase-like 71
FAD-linked reductases, C-terminal domain Folate-binding domain 71
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 72
Homeodomain-like Homeodomain-like 72
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 71
Enolase N-terminal domain-like Enolase C-terminal domain-like 61
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 66
Nucleotide cyclase EAL domain-like 65
Homodimeric domain of signal transducing histidine kinase CheY-like 66
lambda repressor-like DNA-binding domains RmlC-like cupins 61
PreATP-grasp domain Rudiment single hybrid motif 63
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 63
"Winged helix" DNA-binding domain GAF domain-like 61
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheY-like 66
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 66
P-loop containing nucleoside triphosphate hydrolases Translation proteins 65
Formate dehydrogenase/DMSO reductase, domains 1-3 ADC-like 65
"Winged helix" DNA-binding domain NagB/RpiA/CoA transferase-like 51
Cytochrome c Cytochrome c 53
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 51
2Fe-2S ferredoxin-like CO dehydrogenase ISP C-domain like 53
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 52
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB transmembrane domain 55
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 55
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB transmembrane domain 55
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 55
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 53
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 53
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 55
HAMP domain-like Methyl-accepting chemotaxis protein (MCP) signaling domain 43
PYP-like sensor domain (PAS domain) EAL domain-like 44
FKBP-like Triger factor/SurA peptide-binding domain-like 42
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein S5 domain 2-like 44
"Winged helix" DNA-binding domain Chorismate lyase-like 41
Class I glutamine amidotransferase-like Homeodomain-like 41
Nucleic acid-binding proteins Nucleic acid-binding proteins 44
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 41
PYP-like sensor domain (PAS domain) Nucleotide cyclase 44
Glutathione synthetase ATP-binding domain-like Succinyl-CoA synthetase domains 42
PYP-like sensor domain (PAS domain) PYP-like sensor domain (PAS domain) 44
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 44
(Trans)glycosidases Glycosyl hydrolase domain 44
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 44
ISP domain Bet v1-like 41
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 42
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 44
CO dehydrogenase molybdoprotein N-domain-like Molybdenum cofactor-binding domain 42
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 44
ACT-like ACT-like 43
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 33
Molybdenum cofactor biosynthesis proteins MoeA C-terminal domain-like 32
Rudiment single hybrid motif Single hybrid motif 32
TrkA C-terminal domain-like TrkA C-terminal domain-like 32
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 31
Homodimeric domain of signal transducing histidine kinase Histidine-containing phosphotransfer domain, HPT domain 33
NTF2-like NTF2-like 31
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 33
PreATP-grasp domain Single hybrid motif 32
GroES-like GroES-like 31
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 33
CheY-like Homeodomain-like 31
Class II aaRS and biotin synthetases Class II aaRS ABD-related 32
Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 32
CheY-like P-loop containing nucleoside triphosphate hydrolases 31
Phospholipase D/nuclease Phospholipase D/nuclease 33
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 31
2Fe-2S ferredoxin-like 4Fe-4S ferredoxins 33
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 32
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 31
FAD-binding/transporter-associated domain-like CO dehydrogenase flavoprotein C-terminal domain-like 32
HAMP domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 32
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 31
HlyD-like secretion proteins HlyD-like secretion proteins 33
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 33
Translation proteins EF-G C-terminal domain-like 33
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 33
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 31
ParB/Sulfiredoxin KorB DNA-binding domain-like 31
Alpha-L RNA-binding motif Pseudouridine synthase 31
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 33
MoeA N-terminal region -like Molybdenum cofactor biosynthesis proteins 32
Glutathione synthetase ATP-binding domain-like Single hybrid motif 32
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 32
Lysozyme-like PGBD-like 32
Metallo-dependent phosphatases 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain 33
MoeA N-terminal region -like MoeA C-terminal domain-like 32
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Histidine-containing phosphotransfer domain, HPT domain 33
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 31
EF-G C-terminal domain-like EF-G C-terminal domain-like 33
HAMP domain-like PYP-like sensor domain (PAS domain) 33
HAMP domain-like Homodimeric domain of signal transducing histidine kinase 32
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 33
Nqo1 FMN-binding domain-like Nqo1 middle domain-like 22
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Pyrimidine nucleoside phosphorylase C-terminal domain 22
GroEL equatorial domain-like GroEL apical domain-like 21
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 22
Penicillin binding protein dimerisation domain beta-lactamase/transpeptidase-like 22
GroEL-intermediate domain like GroEL apical domain-like 21
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 21
NAD(P)-binding Rossmann-fold domains TrkA C-terminal domain-like 22
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 21
Adenine nucleotide alpha hydrolases-like Adenine nucleotide alpha hydrolases-like 21
MurCD N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
ABC transporter transmembrane region cAMP-binding domain-like 22
PYP-like sensor domain (PAS domain) CheY-like 22
GroEL equatorial domain-like GroEL-intermediate domain like 21
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 21
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex CoA-dependent acyltransferases 22
PYP-like sensor domain (PAS domain) Methyl-accepting chemotaxis protein (MCP) signaling domain 22
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 22
Sigma3 and sigma4 domains of RNA polymerase sigma factors CheY-like 21
Siroheme synthase middle domains-like Tetrapyrrole methylase 21
Pheromone-binding domain of LuxR-like quorum-sensing transcription factors C-terminal effector domain of the bipartite response regulators 21
Glucocorticoid receptor-like (DNA-binding domain) P-loop containing nucleoside triphosphate hydrolases 22
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
Trypsin-like serine proteases PDZ domain-like 22
Nucleic acid-binding proteins RuvA domain 2-like 22
TPR-like TPR-like 22
"Winged helix" DNA-binding domain PLP-dependent transferases 21
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 22
Molybdenum cofactor-binding domain Molybdenum cofactor-binding domain 21
Nucleotidyltransferase Nucleotidyltransferase substrate binding subunit/domain 22
Fe-S cluster assembly (FSCA) domain-like P-loop containing nucleoside triphosphate hydrolases 21
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 22
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 22
CheY-like CheY-like 22
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 22
DnaK suppressor protein DksA, alpha-hairpin domain Glucocorticoid receptor-like (DNA-binding domain) 21
Chemotaxis receptor methyltransferase CheR, N-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 22
Nucleotidyltransferase ACT-like 22
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 22
Riboflavin synthase domain-like 2Fe-2S ferredoxin-like 22
alpha-helical ferredoxin Nucleotide-binding domain 21
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 21
6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 22
Lysozyme-like beta-lactamase/transpeptidase-like 22
Sensory domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 22
Sensory domain-like Homodimeric domain of signal transducing histidine kinase 22
NAD(P)-binding Rossmann-fold domains Siroheme synthase middle domains-like 21
E set domains Glycosyl hydrolase domain 22
FAD/NAD(P)-binding domain HI0933 insert domain-like 21
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 21
NAD(P)-binding Rossmann-fold domains ACT-like 22
Methylated DNA-protein cysteine methyltransferase domain Methylated DNA-protein cysteine methyltransferase, C-terminal domain 22
FMN-linked oxidoreductases Nucleotide-binding domain 22
2Fe-2S ferredoxin-like Formate dehydrogenase/DMSO reductase, domains 1-3 22
DAK1/DegV-like DhaL-like 21
Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Pyrimidine nucleoside phosphorylase C-terminal domain 22
PDZ domain-like PDZ domain-like 22
Homeodomain-like SIS domain 21
Nqo1 middle domain-like Nqo1C-terminal domain-like 22
Nucleotidyltransferase Poly A polymerase C-terminal region-like 22
Nucleic acid-binding proteins Translation proteins SH3-like domain 22
Cobalamin (vitamin B12)-dependent enzymes Cobalamin (vitamin B12)-binding domain 21
PurM N-terminal domain-like PurM C-terminal domain-like 22
P-loop containing nucleoside triphosphate hydrolases cAMP-binding domain-like 22
ClpP/crotonase 6-phosphogluconate dehydrogenase C-terminal domain-like 22
DNA methylase specificity domain DNA methylase specificity domain 21
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 21
CBS-domain pair FAD-binding/transporter-associated domain-like 21
Ferredoxin reductase-like, C-terminal NADP-linked domain 2Fe-2S ferredoxin-like 22
Nqo1 FMN-binding domain-like Nqo1C-terminal domain-like 22
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
Class II aaRS and biotin synthetases ThrRS/AlaRS common domain 22
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 22
HAD-like Calcium ATPase, transmembrane domain M 22
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 22
Methionine synthase domain Cobalamin (vitamin B12)-binding domain 22
CheY-like Histidine-containing phosphotransfer domain, HPT domain 22
PLP-binding barrel Alanine racemase C-terminal domain-like 21
E set domains (Trans)glycosidases 22
Calcium ATPase, transduction domain A HAD-like 22
tRNA-binding arm Class II aaRS and biotin synthetases 21
HMA, heavy metal-associated domain HAD-like 22
Cytochrome c C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase 21
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 21
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 22
NAD(P)-binding Rossmann-fold domains Tetrapyrrole methylase 21
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 22
Single hybrid motif CoA-dependent acyltransferases 22
Aspartate/glutamate racemase Aspartate/glutamate racemase 21
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 22
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 22
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 22
Single hybrid motif Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 22
ClpP/crotonase NAD(P)-binding Rossmann-fold domains 22
ClpP/crotonase ClpP/crotonase 21
MurCD N-terminal domain MurD-like peptide ligases, catalytic domain 21
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 21
FMN-linked oxidoreductases FAD/NAD(P)-binding domain 22
4Fe-4S ferredoxins Formate dehydrogenase/DMSO reductase, domains 1-3 22
Transcription factor NusA, N-terminal domain Prokaryotic type KH domain (KH-domain type II) 11
Cobalamin (vitamin B12)-binding domain Methionine synthase activation domain-like 11
GAF domain-like Phosphoenolpyruvate/pyruvate domain 11
Trigger factor ribosome-binding domain FKBP-like 11
Thioesterase/thiol ester dehydrase-isomerase Thioesterase/thiol ester dehydrase-isomerase 11
Cytochrome c oxidase subunit II-like, transmembrane region Cupredoxins 11
CO dehydrogenase ISP C-domain like CO dehydrogenase flavoprotein C-terminal domain-like 11
YebC-like PFL-like glycyl radical enzymes 11
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 11
Nucleotide-diphospho-sugar transferases RmlC-like cupins 11
PDZ domain-like ClpP/crotonase 11
Fumarylacetoacetate hydrolase, FAH, N-terminal domain FAH 11
Homeodomain-like Ribonuclease H-like 11
TGS-like ACT-like 11
UBC-like Activating enzymes of the ubiquitin-like proteins 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleotidylyl transferase 11
PH0987 N-terminal domain-like Cyclophilin-like 11
"Winged helix" DNA-binding domain LexA/Signal peptidase 11
"Winged helix" DNA-binding domain HRDC-like 11
Chelatase Chelatase 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 11
Homodimeric domain of signal transducing histidine kinase CheW-like 11
Nucleotidyltransferase substrate binding subunit/domain Nucleotidyltransferase substrate binding subunit/domain 11
P-loop containing nucleoside triphosphate hydrolases Pyrimidine nucleoside phosphorylase C-terminal domain 11
TolB, N-terminal domain Tricorn protease N-terminal domain 11
Radical SAM enzymes RuvA domain 2-like 11
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 11
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 11
Oxidoreductase molybdopterin-binding domain E set domains 11
TrmE connector domain P-loop containing nucleoside triphosphate hydrolases 11
EF-G C-terminal domain-like Ribosomal protein S5 domain 2-like 11
Hsp33 domain HSP33 redox switch-like 11
WD40 repeat-like Cytochrome c 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
2Fe-2S ferredoxin-like alpha-helical ferredoxin 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheW-like 11
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 11
Chaperone J-domain HSP40/DnaJ peptide-binding domain 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Eukaryotic type KH-domain (KH-domain type I) 11
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
Actin-like ATPase domain HD-domain/PDEase-like 11
GreA transcript cleavage protein, N-terminal domain FKBP-like 11
Nucleic acid-binding proteins GAD domain-like 11
5' to 3' exonuclease, C-terminal subdomain Ribonuclease H-like 11
Ribosomal protein L6 Ribosomal protein L6 11
P-loop containing nucleoside triphosphate hydrolases TGS-like 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 11
NagB/RpiA/CoA transferase-like NagB/RpiA/CoA transferase-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Adenine nucleotide alpha hydrolases-like 11
Eukaryotic type KH-domain (KH-domain type I) Nucleic acid-binding proteins 11
NagB/RpiA/CoA transferase-like alpha-helical ferredoxin 11
PreATP-grasp domain post-HMGL domain-like 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
SIS domain CBS-domain pair 11
CO dehydrogenase ISP C-domain like Molybdenum cofactor-binding domain 11
P-loop containing nucleoside triphosphate hydrolases Hypothetical protein YjiA, C-terminal domain 11
Nucleotidylyl transferase Riboflavin kinase-like 11
GAF domain-like Nucleotide cyclase 11
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 11
Ribonuclease H-like DNA/RNA polymerases 11
PEP carboxykinase N-terminal domain PEP carboxykinase-like 11
cAMP-binding domain-like Nucleotidyltransferase 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
Nucleic acid-binding proteins Prokaryotic type KH domain (KH-domain type II) 11
HMA, heavy metal-associated domain HMA, heavy metal-associated domain 11
PIN domain-like DNA/RNA polymerases 11
ALDH-like ALDH-like 11
MFS general substrate transporter MFS general substrate transporter 11
Thioredoxin-like Nqo1 middle domain-like 11
N-terminal domain of MutM-like DNA repair proteins Glucocorticoid receptor-like (DNA-binding domain) 11
Glutathione synthetase ATP-binding domain-like Phosphoenolpyruvate/pyruvate domain 11
S13-like H2TH domain Glucocorticoid receptor-like (DNA-binding domain) 11
YlxR-like L30e-like 11
Transcription factor NusA, N-terminal domain Rad51 N-terminal domain-like 11
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 11
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 11
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
2Fe-2S ferredoxin-like FAD-binding/transporter-associated domain-like 11
RmlC-like cupins RmlC-like cupins 11
Protein kinase-like (PK-like) PLP-dependent transferases 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains 11
Rudiment single hybrid motif post-HMGL domain-like 11
Histidine-containing phosphotransfer domain, HPT domain CheW-like 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
Nucleic acid-binding proteins BRCT domain 11
Methionine synthase domain Methionine synthase activation domain-like 11
Carbamate kinase-like PUA domain-like 11
Zinc beta-ribbon DNA primase core 11
FAD/NAD(P)-binding domain Nitrite/Sulfite reductase N-terminal domain-like 11
RNase III domain-like dsRNA-binding domain-like 11
Glutamine synthetase/guanido kinase GatB/YqeY motif 11
TGS-like Class II aaRS and biotin synthetases 11
Duplicated hybrid motif PLP-dependent transferases 11
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 11
HD-domain/PDEase-like Nucleotidyltransferase 11
TT1751-like TT1751-like 11
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 11
Nucleic acid-binding proteins Anticodon-binding domain of PheRS 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
L9 N-domain-like Ribosomal protein L9 C-domain 11
NTF2-like NAD(P)-binding Rossmann-fold domains 11
TerB-like Chaperone J-domain 11
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 11
PheT/TilS domain Class II aaRS and biotin synthetases 11
2Fe-2S ferredoxin-like ADC-like 11
Nucleotide-binding domain FAD/NAD(P)-binding domain 11
Poly A polymerase C-terminal region-like ACT-like 11
FAD-binding/transporter-associated domain-like Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain 11
Tetrapyrrole methylase S-adenosyl-L-methionine-dependent methyltransferases 11
Riboflavin synthase domain-like Riboflavin synthase domain-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 11
MgtE N-terminal domain-like MgtE membrane domain-like 11
Nucleic acid-binding proteins DNA helicase RuvA subunit, C-terminal domain 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Nucleic acid-binding proteins 11
DeoB insert domain-like Alkaline phosphatase-like 11
Tryptophan synthase beta subunit-like PLP-dependent enzymes ACT-like 11
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 11
Aconitase iron-sulfur domain LeuD/IlvD-like 11
P-loop containing nucleoside triphosphate hydrolases TrpR-like 11
Formate/glycerate dehydrogenase catalytic domain-like ACT-like 11
Regulatory protein AraC Homeodomain-like 11
Photosystem II reaction centre subunit H, transmembrane region PRC-barrel domain 11
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 11
HD-domain/PDEase-like ACT-like 11
TGS-like Class II aaRS ABD-related 11
P-loop containing nucleoside triphosphate hydrolases Zinc beta-ribbon 11
Formyltransferase FMT C-terminal domain-like 11
N-terminal domain of bifunctional PutA protein FAD-linked oxidoreductase 11
Prokaryotic type KH domain (KH-domain type II) Rad51 N-terminal domain-like 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
NagB/RpiA/CoA transferase-like D-ribose-5-phosphate isomerase (RpiA), lid domain 11
Single hybrid motif Thiamin diphosphate-binding fold (THDP-binding) 11
FAD-linked reductases, C-terminal domain 4Fe-4S ferredoxins 11
ATP-dependent DNA ligase DNA-binding domain DNA ligase/mRNA capping enzyme, catalytic domain 11
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 11
2Fe-2S ferredoxin-like CO dehydrogenase molybdoprotein N-domain-like 11
2Fe-2S ferredoxin-like CO dehydrogenase flavoprotein C-terminal domain-like 11
PLP-dependent transferases PLP-dependent transferases 11
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase HSP90 C-terminal domain 11
beta-lactamase/transpeptidase-like Penicillin-binding protein associated domain 11
Aldolase Single hybrid motif 11
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 11
NAD(P)-binding Rossmann-fold domains Isocitrate/Isopropylmalate dehydrogenase-like 11
Nucleotide cyclase TPR-like 11
Nucleotidyltransferase substrate binding subunit/domain ACT-like 11
Methylesterase CheB, C-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 11
Elongation factor Ts (EF-Ts), dimerisation domain Elongation factor Ts (EF-Ts), dimerisation domain 11
Folate-binding domain TrmE connector domain 11
PreATP-grasp domain Aldolase 11
PPK N-terminal domain-like Phospholipase D/nuclease 11
CheY-like Nucleotide cyclase 11
Serine metabolism enzymes domain ACT-like 11
Rho N-terminal domain-like Nucleic acid-binding proteins 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain ACT-like 11
PIN domain-like Ribonuclease H-like 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
Multiheme cytochromes TPR-like 11
CO dehydrogenase ISP C-domain like FAD-binding/transporter-associated domain-like 11
FliG FliG 11
PYP-like sensor domain (PAS domain) Histidine-containing phosphotransfer domain, HPT domain 11
PHP14-like Phospholipase D/nuclease 11
Metalloproteases ("zincins"), catalytic domain beta-Roll 11
Ribosomal protein S5 domain 2-like HSP90 C-terminal domain 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
lambda integrase-like, N-terminal domain DNA breaking-rejoining enzymes 11
Formate/glycerate dehydrogenase catalytic domain-like Serine metabolism enzymes domain 11
Sensory domain-like PYP-like sensor domain (PAS domain) 11
N-terminal domain of bifunctional PutA protein ALDH-like 11
Cytidine deaminase-like Dihydrofolate reductase-like 11
PreATP-grasp domain Methylglyoxal synthase-like 11
beta-Roll Integrin alpha N-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases C-terminal UvrC-binding domain of UvrB 11
"Winged helix" DNA-binding domain S-adenosyl-L-methionine-dependent methyltransferases 11
Transmembrane di-heme cytochromes a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 11
FAD/NAD(P)-binding domain Nitrite and sulphite reductase 4Fe-4S domain-like 11
Concanavalin A-like lectins/glucanases Concanavalin A-like lectins/glucanases 11
SGNH hydrolase Fibronectin type III 11
alpha/beta-Hydrolases alpha/beta-Hydrolases 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 11
PRC-barrel domain PRC-barrel domain 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
Nucleotidyltransferase substrate binding subunit/domain Poly A polymerase C-terminal region-like 11
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 11
NAD(P)-binding Rossmann-fold domains UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 11
Nucleotide-binding domain FAD-linked reductases, C-terminal domain 11
Thioredoxin-like Nqo1 FMN-binding domain-like 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 11
PUA domain-like Nucleotidylyl transferase 11
Integrin alpha N-terminal domain Integrin alpha N-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases TPR-like 11
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 11
Translation proteins PRC-barrel domain 11
Methylglyoxal synthase-like Cytidine deaminase-like 11
Aminoacid dehydrogenase-like, N-terminal domain Isocitrate/Isopropylmalate dehydrogenase-like 11
Mechanosensitive channel protein MscS (YggB), C-terminal domain cAMP-binding domain-like 11
PreATP-grasp domain PreATP-grasp domain 11
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
Glycoside hydrolase/deacetylase UraD-Like 11
Single hybrid motif Single hybrid motif 11
Adenine nucleotide alpha hydrolases-like DHS-like NAD/FAD-binding domain 11
post-HMGL domain-like Single hybrid motif 11
NAD(P)-binding Rossmann-fold domains Serine metabolism enzymes domain 11
Rho N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
Phage tail proteins gp5 N-terminal domain-like 11
Galactose mutarotase-like E set domains 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
CheY-like PP2C-like 11
PPK N-terminal domain-like PHP14-like 11
PYP-like sensor domain (PAS domain) Homeodomain-like 11
Homeodomain-like Methylated DNA-protein cysteine methyltransferase domain 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
Aldolase post-HMGL domain-like 11
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 11
GAF domain-like Phosphohistidine domain 11
"Winged helix" DNA-binding domain Actin-like ATPase domain 11
PUA domain-like S-adenosyl-L-methionine-dependent methyltransferases 11
Class II aaRS and biotin synthetases GAD domain-like 11
Glutathione synthetase ATP-binding domain-like Aldolase 11
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 11
Nitrous oxide reductase, N-terminal domain Cupredoxins 11
Cryptochrome/photolyase, N-terminal domain Cryptochrome/photolyase FAD-binding domain 11
MgtE N-terminal domain-like CBS-domain pair 11
Transmembrane di-heme cytochromes YceI-like 11
Nucleic acid-binding proteins ArfGap/RecO-like zinc finger 11
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 11
Acid proteases Glutathione synthetase ATP-binding domain-like 11
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 11
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
RBP11-like subunits of RNA polymerase C-terminal domain of RNA polymerase alpha subunit 11
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 11
Translation proteins ThrRS/AlaRS common domain 11
NTF2-like FAD/NAD(P)-binding domain 11
Nucleotidyltransferase Nucleotidyltransferase 11
Translation proteins Ribosomal protein S5 domain 2-like 11
Anthrax protective antigen Anthrax protective antigen 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 11
LysM domain Duplicated hybrid motif 11
PheT/TilS domain Anticodon-binding domain of PheRS 11
FMN-linked oxidoreductases Alpha subunit of glutamate synthase, C-terminal domain 11
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 11
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
FAD/NAD(P)-binding domain 4Fe-4S ferredoxins 11
Bacterial muramidases Lysozyme-like 11
N-terminal domain of DnaB helicase P-loop containing nucleoside triphosphate hydrolases 11
RuvA domain 2-like DNA helicase RuvA subunit, C-terminal domain 11
PFL-like glycyl radical enzymes lambda repressor-like DNA-binding domains 11
ADC-like Cytochrome c 11
Thiamin pyrophosphokinase, catalytic domain Thiamin pyrophosphokinase, substrate-binding domain 11
Thioredoxin-like Nqo1C-terminal domain-like 11
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 11
Diaminopimelate epimerase-like Diaminopimelate epimerase-like 11
Thiamin diphosphate-binding fold (THDP-binding) Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 11
AraD/HMP-PK domain-like NAD(P)-binding Rossmann-fold domains 11
GAF domain-like PYP-like sensor domain (PAS domain) 11
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 11
Rudiment single hybrid motif Aldolase 11
Macro domain-like Zn-dependent exopeptidases 11
Nucleotidylyl transferase tRNA-binding arm 11
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 11
CheY-like Methylesterase CheB, C-terminal domain 11
Dihydropteroate synthetase-like Methionine synthase domain 11
Urease metallochaperone UreE, N-terminal domain Urease metallochaperone UreE, C-terminal domain 11
Homeodomain-like Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
5' to 3' exonuclease, C-terminal subdomain DNA/RNA polymerases 11
P-loop containing nucleoside triphosphate hydrolases CarD-like 11
PheT/TilS domain Putative DNA-binding domain 11
Carbamate kinase-like ACT-like 11
HRDC-like HRDC-like 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 11
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 11
Translation proteins Translation proteins 11
EspE N-terminal domain-like Nucleotide-diphospho-sugar transferases 11
Homo-oligomeric flavin-containing Cys decarboxylases, HFCD CoaB-like 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 11
L30e-like alpha/beta knot 11
ATP-dependent DNA ligase DNA-binding domain Nucleic acid-binding proteins 11
Nucleic acid-binding proteins PheT/TilS domain 11
P-loop containing nucleoside triphosphate hydrolases HRDC-like 11
Carbon-nitrogen hydrolase Adenine nucleotide alpha hydrolases-like 11
Methylesterase CheB, C-terminal domain PYP-like sensor domain (PAS domain) 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
Dihydropteroate synthetase-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
YrdC/RibB RibA-like 11
alpha/beta-Hydrolases Galactose-binding domain-like 11
Nucleotide-diphospho-sugar transferases UDP-Glycosyltransferase/glycogen phosphorylase 11
Transcription factor NusA, N-terminal domain Nucleic acid-binding proteins 11
DNA ligase/mRNA capping enzyme, catalytic domain RuvA domain 2-like 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11
Hypothetical protein SAV1430 Fe-S cluster assembly (FSCA) domain-like 11
MalF N-terminal region-like MetI-like 11
Nitrite/Sulfite reductase N-terminal domain-like Nitrite/Sulfite reductase N-terminal domain-like 11
GAF domain-like EAL domain-like 11
PGBD-like Trypsin-like serine proteases 11
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
Periplasmic binding protein-like II ACT-like 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
Protein kinase-like (PK-like) Duplicated hybrid motif 11
Prokaryotic type KH domain (KH-domain type II) Prokaryotic type KH domain (KH-domain type II) 11
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 11
Folate-binding domain P-loop containing nucleoside triphosphate hydrolases 11
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 11
PK beta-barrel domain-like PK C-terminal domain-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 11
Nucleotidyltransferase TGS-like 11
Heme-dependent peroxidases Heme-dependent peroxidases 11
Nucleotidylyl transferase P-loop containing nucleoside triphosphate hydrolases 11
Concanavalin A-like lectins/glucanases beta-Roll 11
GAF domain-like Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphohistidine domain 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Alpha subunit of glutamate synthase, C-terminal domain 11
4Fe-4S ferredoxins Riboflavin synthase domain-like 11
Nitrite and sulphite reductase 4Fe-4S domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
Formate dehydrogenase/DMSO reductase, domains 1-3 Cytochrome c 11
Ribonuclease PH domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
Translation proteins Initiation factor IF2/eIF5b, domain 3 11
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 11
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 11
FAD-linked oxidoreductase ALDH-like 11
Sm-like ribonucleoproteins cAMP-binding domain-like 11
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 11
Glutathione synthetase ATP-binding domain-like post-HMGL domain-like 11
NAD(P)-binding Rossmann-fold domains Glutathione synthetase ATP-binding domain-like 11
Leukotriene A4 hydrolase N-terminal domain Metalloproteases ("zincins"), catalytic domain 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
CBS-domain pair MgtE membrane domain-like 11
P-loop containing nucleoside triphosphate hydrolases Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 11
4Fe-4S ferredoxins Ferredoxin reductase-like, C-terminal NADP-linked domain 11
(Trans)glycosidases Class I glutamine amidotransferase-like 11
Dihydropteroate synthetase-like Cobalamin (vitamin B12)-binding domain 11
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 11
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FMN-linked oxidoreductases 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
Rhodanese/Cell cycle control phosphatase Rhodanese/Cell cycle control phosphatase 11
CarD-like TRCF domain-like 11
YhbC-like, N-terminal domain YhbC-like, C-terminal domain 11
cAMP-binding domain-like CBS-domain pair 11
CO dehydrogenase ISP C-domain like CO dehydrogenase molybdoprotein N-domain-like 11
NAD(P)-binding Rossmann-fold domains Thioesterase/thiol ester dehydrase-isomerase 11
Nucleotide cyclase P-loop containing nucleoside triphosphate hydrolases 11
HD-domain/PDEase-like TGS-like 11
alpha/beta-Hydrolases OsmC-like 11
P-loop containing nucleoside triphosphate hydrolases vWA-like 11
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 11
Nucleic acid-binding proteins Putative DNA-binding domain 11
6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 11
Nucleic acid-binding proteins Rad51 N-terminal domain-like 11
TGS-like ThrRS/AlaRS common domain 11
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 11
2Fe-2S ferredoxin-like Molybdenum cofactor-binding domain 11
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 11
Cupredoxins Cupredoxins 11
P-loop containing nucleoside triphosphate hydrolases Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain 11
RuvA domain 2-like BRCT domain 11
FAD/NAD(P)-binding domain NAD(P)-binding Rossmann-fold domains 11
Ribosomal protein S5 domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
Methylesterase CheB, C-terminal domain Chemotaxis receptor methyltransferase CheR, N-terminal domain 11
Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 11
PGBD-like L,D-transpeptidase catalytic domain-like 11
Class II aaRS and biotin synthetases Translation proteins 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphoenolpyruvate/pyruvate domain 11
Putative DNA-binding domain Anticodon-binding domain of PheRS 11
"Winged helix" DNA-binding domain Phosphotyrosine protein phosphatases I 11
P-loop containing nucleoside triphosphate hydrolases Restriction endonuclease-like 11
Single hybrid motif TK C-terminal domain-like 11
Dihydropteroate synthetase-like Methionine synthase activation domain-like 11
4Fe-4S ferredoxins ADC-like 11
Thioredoxin-like TPR-like 11
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 11
Aldolase AFP III-like domain 11
dUTPase-like dUTPase-like 11
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 11
2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain Alkaline phosphatase-like 11
E set domains E set domains 11
6-phosphogluconate dehydrogenase C-terminal domain-like Thioesterase/thiol ester dehydrase-isomerase 11
Succinyl-CoA synthetase domains Succinyl-CoA synthetase domains 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
PUA domain-like Ribosomal protein S5 domain 2-like 11
Prokaryotic type I DNA topoisomerase Zinc beta-ribbon 11
all-alpha NTP pyrophosphatases all-alpha NTP pyrophosphatases 11
S-adenosyl-L-methionine-dependent methyltransferases PYP-like sensor domain (PAS domain) 11
CBS-domain pair Nucleotidyltransferase 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
vWA-like TPR-like 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 11
FMN-linked oxidoreductases 4Fe-4S ferredoxins 11
Chemotaxis receptor methyltransferase CheR, N-terminal domain PYP-like sensor domain (PAS domain) 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
DNA clamp DNA clamp 11
DNA-glycosylase Nudix 11
Ribonuclease H-like HRDC-like 11

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