SUPERFAMILY 1.75 HMM library and genome assignments server

Domain combination pairs in Xanthobacter autotrophicus Py2

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

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Adjacent domain pairs graph

Graph of adjacent domain pairs.


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Domain combination pairs

710 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
"Winged helix" DNA-binding domain Periplasmic binding protein-like II 572
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 4215
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 4015
Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase C-terminal domain-like 264
NAD(P)-binding Rossmann-fold domains GroES-like 247
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB transmembrane domain 217
Homeodomain-like Tetracyclin repressor-like, C-terminal domain 212
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 214
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 217
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 217
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 217
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB transmembrane domain 217
"Winged helix" DNA-binding domain GntR ligand-binding domain-like 206
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 206
Thioredoxin-like GST C-terminal domain-like 171
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 173
Calcium ATPase, transduction domain A HAD-like 159
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 156
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 156
HAD-like Calcium ATPase, transmembrane domain M 148
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 148
CheY-like C-terminal effector domain of the bipartite response regulators 141
Cupredoxins Cupredoxins 137
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 135
ParB/Sulfiredoxin KorB DNA-binding domain-like 132
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 125
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 123
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 125
Metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 126
Thiolase-like Thiolase-like 121
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 125
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 1210
CheY-like Homeodomain-like 113
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 114
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 102
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 108
CheY-like P-loop containing nucleoside triphosphate hydrolases 102
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 103
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 95
PYP-like sensor domain (PAS domain) Nucleotide cyclase 87
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 84
Actin-like ATPase domain Actin-like ATPase domain 84
NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains 77
"Winged helix" DNA-binding domain GAF domain-like 72
P-loop containing nucleoside triphosphate hydrolases MOP-like 71
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 73
Cytochrome c Cytochrome c 76
P-loop containing nucleoside triphosphate hydrolases Translation proteins 76
Nucleotide cyclase EAL domain-like 75
PYP-like sensor domain (PAS domain) PYP-like sensor domain (PAS domain) 76
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 74
CoA-dependent acyltransferases CoA-dependent acyltransferases 66
ACP-like CoA-dependent acyltransferases 66
HMA, heavy metal-associated domain HAD-like 63
PreATP-grasp domain Rudiment single hybrid motif 63
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 61
lambda repressor-like DNA-binding domains Periplasmic binding protein-like I 61
Acetyl-CoA synthetase-like ACP-like 66
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 63
Formate dehydrogenase/DMSO reductase, domains 1-3 ADC-like 63
Ferredoxin reductase-like, C-terminal NADP-linked domain 2Fe-2S ferredoxin-like 62
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 61
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 65
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 63
Folate-binding domain Aminomethyltransferase beta-barrel domain 63
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 63
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheY-like 66
Riboflavin synthase domain-like 2Fe-2S ferredoxin-like 62
NAD(P)-binding Rossmann-fold domains ACP-like 66
Nucleic acid-binding proteins Nucleic acid-binding proteins 54
lambda integrase-like, N-terminal domain DNA breaking-rejoining enzymes 53
Homeodomain-like Homeodomain-like 53
FabD/lysophospholipase-like NAD(P)-binding Rossmann-fold domains 55
Thiolase-like NAD(P)-binding Rossmann-fold domains 55
HAMP domain-like Homodimeric domain of signal transducing histidine kinase 53
2Fe-2S ferredoxin-like CO dehydrogenase ISP C-domain like 54
FabD/lysophospholipase-like ACP-like 55
Thiolase-like FabD/lysophospholipase-like 55
Thiolase-like ACP-like 55
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 53
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 55
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 54
Homodimeric domain of signal transducing histidine kinase CheY-like 55
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 51
Enolase N-terminal domain-like Enolase C-terminal domain-like 51
HAMP domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 53
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 52
PurM N-terminal domain-like PurM C-terminal domain-like 52
Sensory domain-like Homodimeric domain of signal transducing histidine kinase 43
FabD/lysophospholipase-like GroES-like 44
Ferritin-like Calcium ATPase, transmembrane domain M 42
CoA-dependent acyltransferases Acetyl-CoA synthetase-like 44
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 41
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 43
Probable ACP-binding domain of malonyl-CoA ACP transacylase NAD(P)-binding Rossmann-fold domains 44
CO dehydrogenase molybdoprotein N-domain-like Molybdenum cofactor-binding domain 43
PYP-like sensor domain (PAS domain) CheY-like 44
Probable ACP-binding domain of malonyl-CoA ACP transacylase ACP-like 44
S-adenosyl-L-methionine-dependent methyltransferases P-loop containing nucleoside triphosphate hydrolases 43
Thiolase-like GroES-like 44
PLP-binding barrel Alanine racemase C-terminal domain-like 42
Ferritin-like HAD-like 42
6-phosphogluconate dehydrogenase C-terminal domain-like ClpP/crotonase 42
6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 42
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 44
HlyD-like secretion proteins HlyD-like secretion proteins 43
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 41
GAF domain-like Homeodomain-like 43
Thiolase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 44
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein S5 domain 2-like 44
Sensory domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 43
Lysozyme-like beta-lactamase/transpeptidase-like 43
GAF domain-like P-loop containing nucleoside triphosphate hydrolases 43
NAD(P)-binding Rossmann-fold domains ClpP/crotonase 42
P-loop containing nucleoside triphosphate hydrolases Hypothetical protein YjiA, C-terminal domain 42
Ferritin-like Calcium ATPase, transduction domain A 42
GroES-like ACP-like 44
Succinyl-CoA synthetase domains Glutathione synthetase ATP-binding domain-like 43
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 43
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 41
Oxidoreductase molybdopterin-binding domain E set domains 41
cAMP-binding domain-like "Winged helix" DNA-binding domain 41
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 32
Alpha-L RNA-binding motif Pseudouridine synthase 32
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 32
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 31
Glutathione synthetase ATP-binding domain-like Single hybrid motif 32
Thioesterase/thiol ester dehydrase-isomerase Thioesterase/thiol ester dehydrase-isomerase 31
Dimeric alpha+beta barrel Dimeric alpha+beta barrel 32
TPR-like UDP-Glycosyltransferase/glycogen phosphorylase 32
Trypsin-like serine proteases PDZ domain-like 32
EF-G C-terminal domain-like EF-G C-terminal domain-like 33
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 31
Lysozyme-like PGBD-like 31
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 33
Rhodanese/Cell cycle control phosphatase Rhodanese/Cell cycle control phosphatase 31
FKBP-like Triger factor/SurA peptide-binding domain-like 32
Cobalamin (vitamin B12)-dependent enzymes Cobalamin (vitamin B12)-binding domain 31
PreATP-grasp domain Single hybrid motif 32
Single hybrid motif Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 32
Nqo1 FMN-binding domain-like Nqo1 middle domain-like 32
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 32
Adenine nucleotide alpha hydrolases-like DHS-like NAD/FAD-binding domain 31
Probable ACP-binding domain of malonyl-CoA ACP transacylase GroES-like 33
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 33
PYP-like sensor domain (PAS domain) GAF domain-like 33
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 31
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 33
NAD(P)-binding Rossmann-fold domains ACT-like 33
Nqo1 FMN-binding domain-like Nqo1C-terminal domain-like 32
TPR-like TPR-like 33
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 33
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 32
Nucleic acid-binding proteins RuvA domain 2-like 33
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 32
Translation proteins EF-G C-terminal domain-like 33
ACT-like ACT-like 33
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 32
Class II aaRS and biotin synthetases Class II aaRS ABD-related 33
Nitrite and sulphite reductase 4Fe-4S domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 32
PDZ domain-like PDZ domain-like 32
Resolvase-like Homeodomain-like 31
"Winged helix" DNA-binding domain Dimeric alpha+beta barrel 31
MetI-like MetI-like 32
Rudiment single hybrid motif Single hybrid motif 32
Nqo1 middle domain-like Nqo1C-terminal domain-like 32
PYP-like sensor domain (PAS domain) EAL domain-like 33
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 31
Acetyl-CoA synthetase-like Acetyl-CoA synthetase-like 33
Nitrite/Sulfite reductase N-terminal domain-like Nitrite/Sulfite reductase N-terminal domain-like 32
Nucleotidyltransferase ACT-like 22
GAF domain-like GAF domain-like 22
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 22
MgtE N-terminal domain-like MgtE membrane domain-like 21
NAD(P)-binding Rossmann-fold domains CoA-dependent acyltransferases 22
Translation proteins SH3-like domain Nucleic acid-binding proteins 22
GAF domain-like Nucleotide cyclase 22
2Fe-2S ferredoxin-like 4Fe-4S ferredoxins 22
CBS-domain pair MgtE membrane domain-like 21
2Fe-2S ferredoxin-like Formate dehydrogenase/DMSO reductase, domains 1-3 22
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 21
Flavoproteins Ferredoxin reductase-like, C-terminal NADP-linked domain 21
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 22
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex CoA-dependent acyltransferases 21
lambda repressor-like DNA-binding domains RmlC-like cupins 21
NAD(P)-binding Rossmann-fold domains Tetrapyrrole methylase 21
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 22
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 22
P-loop containing nucleoside triphosphate hydrolases Protein kinase-like (PK-like) 22
RuBisCO, large subunit, small (N-terminal) domain RuBisCo, C-terminal domain 21
EspE N-terminal domain-like Nucleotide-diphospho-sugar transferases 22
Calcium ATPase, transduction domain A Metal cation-transporting ATPase, ATP-binding domain N 22
Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 22
Adenine nucleotide alpha hydrolases-like Adenine nucleotide alpha hydrolases-like 21
Thiolase-like CoA-dependent acyltransferases 22
Probable ACP-binding domain of malonyl-CoA ACP transacylase CoA-dependent acyltransferases 22
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 21
Siroheme synthase middle domains-like Tetrapyrrole methylase 21
Acetyl-CoA synthetase-like alpha/beta-Hydrolases 22
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 22
ACP-like ACP-like 22
GroES-like CoA-dependent acyltransferases 22
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 22
ISP domain Bet v1-like 21
GroEL-intermediate domain like GroEL apical domain-like 21
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 22
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 22
GAF domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 22
Nucleotidyltransferase Nucleotidyltransferase substrate binding subunit/domain 22
Chaperone J-domain HSP40/DnaJ peptide-binding domain 22
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 22
Metal cation-transporting ATPase, ATP-binding domain N Calcium ATPase, transmembrane domain M 22
ACP-like alpha/beta-Hydrolases 22
NAD(P)-binding Rossmann-fold domains Siroheme synthase middle domains-like 21
4'-phosphopantetheinyl transferase 4'-phosphopantetheinyl transferase 21
Flavoproteins Riboflavin synthase domain-like 21
FAD/NAD(P)-binding domain Aminomethyltransferase beta-barrel domain 21
ClpP/crotonase ClpP/crotonase 21
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 21
2Fe-2S ferredoxin-like alpha-helical ferredoxin 21
GroEL equatorial domain-like GroEL-intermediate domain like 21
Molybdenum cofactor-binding domain Molybdenum cofactor-binding domain 22
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 22
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
Succinyl-CoA synthetase domains Succinyl-CoA synthetase domains 22
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 22
Formate/glycerate dehydrogenase catalytic domain-like ACT-like 22
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
L30e-like alpha/beta knot 21
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 21
PH0987 N-terminal domain-like Cyclophilin-like 22
GroEL equatorial domain-like GroEL apical domain-like 21
NAD(P)-binding Rossmann-fold domains Glutathione synthetase ATP-binding domain-like 22
Class I glutamine amidotransferase-like Homeodomain-like 21
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 22
Metal cation-transporting ATPase, ATP-binding domain N HAD-like 22
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 22
FAD/NAD(P)-binding domain Folate-binding domain 21
Class II aaRS and biotin synthetases ThrRS/AlaRS common domain 22
Phospholipase D/nuclease Phospholipase D/nuclease 22
NosL/MerB-like FAD/NAD-linked reductases, dimerisation (C-terminal) domain 21
CBS-domain pair FAD-binding/transporter-associated domain-like 21
MgtE N-terminal domain-like CBS-domain pair 21
Single hybrid motif CoA-dependent acyltransferases 21
Nucleotidyltransferase Poly A polymerase C-terminal region-like 22
FabD/lysophospholipase-like CoA-dependent acyltransferases 22
NosL/MerB-like FAD/NAD(P)-binding domain 21
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 21
Single hybrid motif alpha/beta-Hydrolases 22
4Fe-4S ferredoxins Formate dehydrogenase/DMSO reductase, domains 1-3 22
tRNA-binding arm Class II aaRS and biotin synthetases 22
Ribonuclease H-like Nucleic acid-binding proteins 11
Acetyl-CoA synthetase-like FMN-dependent nitroreductase-like 11
EF-G C-terminal domain-like Ribosomal protein S5 domain 2-like 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 11
PUA domain-like Ribosomal protein S5 domain 2-like 11
TGS-like Class II aaRS ABD-related 11
Nucleic acid-binding proteins GAD domain-like 11
Clc chloride channel CBS-domain pair 11
Riboflavin synthase domain-like Riboflavin synthase domain-like 11
YebC-like PFL-like glycyl radical enzymes 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 11
Methylglyoxal synthase-like Cytidine deaminase-like 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
Sensory domain-like HAMP domain-like 11
Ribokinase-like Nucleotidylyl transferase 11
LysM domain Duplicated hybrid motif 11
GAF domain-like Homodimeric domain of signal transducing histidine kinase 11
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 11
2Fe-2S ferredoxin-like ADC-like 11
CoA-dependent acyltransferases FMN-dependent nitroreductase-like 11
GAF domain-like Phosphoenolpyruvate/pyruvate domain 11
Periplasmic binding protein-like II NosL/MerB-like 11
RmlC-like cupins Homeodomain-like 11
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 11
Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
"Winged helix" DNA-binding domain Actin-like ATPase domain 11
Prokaryotic type KH domain (KH-domain type II) Rad51 N-terminal domain-like 11
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 11
CheY-like "Winged helix" DNA-binding domain 11
Elongation factor Ts (EF-Ts), dimerisation domain Elongation factor Ts (EF-Ts), dimerisation domain 11
NAD(P)-binding Rossmann-fold domains TrkA C-terminal domain-like 11
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 11
Ferritin-like Ferritin-like 11
PK beta-barrel domain-like PK C-terminal domain-like 11
N-terminal domain of MutM-like DNA repair proteins Glucocorticoid receptor-like (DNA-binding domain) 11
MFS general substrate transporter MFS general substrate transporter 11
Methionine synthase domain Cobalamin (vitamin B12)-binding domain 11
NAD(P)-binding Rossmann-fold domains Serine metabolism enzymes domain 11
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 11
PGBD-like PGBD-like 11
PHP domain-like AF1531-like 11
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 11
HRDC-like HRDC-like 11
Leukotriene A4 hydrolase N-terminal domain Metalloproteases ("zincins"), catalytic domain 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
DinB/YfiT-like putative metalloenzymes C-type lectin-like 11
Translation proteins Initiation factor IF2/eIF5b, domain 3 11
P-loop containing nucleoside triphosphate hydrolases C-terminal UvrC-binding domain of UvrB 11
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 11
Rhodanese/Cell cycle control phosphatase Ankyrin repeat 11
TrmE connector domain P-loop containing nucleoside triphosphate hydrolases 11
4Fe-4S ferredoxins ADC-like 11
Cobalamin (vitamin B12)-binding domain Methionine synthase activation domain-like 11
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
Hypothetical protein SAV1430 Fe-S cluster assembly (FSCA) domain-like 11
Translation proteins Ribosomal protein S5 domain 2-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Alpha subunit of glutamate synthase, C-terminal domain 11
Acetyl-CoA synthetase-like S-adenosyl-L-methionine-dependent methyltransferases 11
Cytidine deaminase-like Dihydrofolate reductase-like 11
Radical SAM enzymes Nitrogenase accessory factor-like 11
DNA primase core P-loop containing nucleoside triphosphate hydrolases 11
Ribosomal protein L6 Ribosomal protein L6 11
Rho N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
PUA domain-like alpha/beta knot 11
FAD/NAD(P)-binding domain NAD(P)-binding Rossmann-fold domains 11
beta-lactamase/transpeptidase-like Penicillin-binding protein associated domain 11
PreATP-grasp domain Methylglyoxal synthase-like 11
P-loop containing nucleoside triphosphate hydrolases Dehydroquinate synthase-like 11
Nucleotidyltransferase Nucleotidyltransferase 11
Cyclophilin-like Cyclophilin-like 11
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 11
PH0987 N-terminal domain-like Single hybrid motif 11
Poly A polymerase C-terminal region-like ACT-like 11
Acetyl-CoA synthetase-like Protein kinase-like (PK-like) 11
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 11
CoA-dependent acyltransferases alpha/beta-Hydrolases 11
TPR-like S-adenosyl-L-methionine-dependent methyltransferases 11
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 11
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 11
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 11
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 11
YhbC-like, N-terminal domain YhbC-like, C-terminal domain 11
PreATP-grasp domain PreATP-grasp domain 11
Molybdenum cofactor-binding domain Cytochrome c 11
FAD-binding/transporter-associated domain-like CO dehydrogenase flavoprotein C-terminal domain-like 11
Adenine nucleotide alpha hydrolases-like Homodimeric domain of signal transducing histidine kinase 11
(Trans)glycosidases Glycosyl hydrolase domain 11
Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), C-terminal domain 11
Nucleotide-binding domain Nucleotide-binding domain 11
Ribonuclease H-like HRDC-like 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
PYP-like sensor domain (PAS domain) Ribonuclease H-like 11
Fumarylacetoacetate hydrolase, FAH, N-terminal domain FAH 11
P-loop containing nucleoside triphosphate hydrolases TGS-like 11
Nucleic acid-binding proteins Prokaryotic type KH domain (KH-domain type II) 11
FAD/NAD(P)-binding domain FabD/lysophospholipase-like 11
Thioredoxin-like Thioredoxin-like 11
all-alpha NTP pyrophosphatases all-alpha NTP pyrophosphatases 11
PGBD-like L,D-transpeptidase catalytic domain-like 11
Aldolase post-HMGL domain-like 11
GAF domain-like Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 11
RuvA domain 2-like BRCT domain 11
ALDH-like Thioesterase/thiol ester dehydrase-isomerase 11
S13-like H2TH domain Glucocorticoid receptor-like (DNA-binding domain) 11
P-loop containing nucleoside triphosphate hydrolases Smc hinge domain 11
Nucleic acid-binding proteins ArfGap/RecO-like zinc finger 11
PIN domain-like DNA/RNA polymerases 11
PLP-dependent transferases Ornithine decarboxylase C-terminal domain 11
EspE N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
NAD(P)-binding Rossmann-fold domains Isocitrate/Isopropylmalate dehydrogenase-like 11
HD-domain/PDEase-like TGS-like 11
Prokaryotic type KH domain (KH-domain type II) Prokaryotic type KH domain (KH-domain type II) 11
FAD/NAD(P)-binding domain 4Fe-4S ferredoxins 11
alpha-helical ferredoxin Nucleotide-binding domain 11
Formate/glycerate dehydrogenase catalytic domain-like Serine metabolism enzymes domain 11
Nucleotidyltransferase TGS-like 11
NAD(P)-binding Rossmann-fold domains alpha/beta-Hydrolases 11
Penicillin binding protein dimerisation domain beta-lactamase/transpeptidase-like 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
PheT/TilS domain Anticodon-binding domain of PheRS 11
DNA ligase/mRNA capping enzyme, catalytic domain RuvA domain 2-like 11
C-terminal UvrC-binding domain of UvrB RuvA domain 2-like 11
(Trans)glycosidases Nucleotide-diphospho-sugar transferases 11
Periplasmic binding protein-like II ACT-like 11
HD-domain/PDEase-like ACT-like 11
Actin-like ATPase domain HD-domain/PDEase-like 11
2Fe-2S ferredoxin-like Molybdenum cofactor-binding domain 11
2Fe-2S ferredoxin-like Bet v1-like 11
NAD(P)-binding Rossmann-fold domains MurD-like peptide ligases, catalytic domain 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
L9 N-domain-like Ribosomal protein L9 C-domain 11
PEP carboxykinase N-terminal domain PEP carboxykinase-like 11
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
"Winged helix" DNA-binding domain PLP-dependent transferases 11
NagB/RpiA/CoA transferase-like D-ribose-5-phosphate isomerase (RpiA), lid domain 11
Nucleic acid-binding proteins PheT/TilS domain 11
Translation proteins ThrRS/AlaRS common domain 11
Rudiment single hybrid motif Cyclophilin-like 11
Respiratory nitrate reductase 1 gamma chain alpha-helical ferredoxin 11
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 11
PIN domain-like Acyl-CoA N-acyltransferases (Nat) 11
Single hybrid motif TK C-terminal domain-like 11
GroES-like GroES-like 11
FAD-linked reductases, C-terminal domain 4Fe-4S ferredoxins 11
P-loop containing nucleoside triphosphate hydrolases Restriction endonuclease-like 11
P-loop containing nucleoside triphosphate hydrolases ACT-like 11
LigT-like Herpes virus serine proteinase, assemblin 11
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 11
Cryptochrome/photolyase, N-terminal domain Cryptochrome/photolyase FAD-binding domain 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
2Fe-2S ferredoxin-like FAD-binding/transporter-associated domain-like 11
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 11
FMN-dependent nitroreductase-like FMN-dependent nitroreductase-like 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphohistidine domain 11
Nucleic acid-binding proteins Rad51 N-terminal domain-like 11
DNA methylase specificity domain DNA methylase specificity domain 11
lambda repressor-like DNA-binding domains P-loop containing nucleoside triphosphate hydrolases 11
HAMP domain-like PYP-like sensor domain (PAS domain) 11
MoeA N-terminal region -like Molybdenum cofactor biosynthesis proteins 11
"Winged helix" DNA-binding domain S-adenosyl-L-methionine-dependent methyltransferases 11
FMN-linked oxidoreductases Nucleotide-binding domain 11
GIY-YIG endonuclease RuvA domain 2-like 11
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphoenolpyruvate/pyruvate domain 11
Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha) Thioredoxin-like 11
alpha-helical ferredoxin ARM repeat 11
Transcription factor NusA, N-terminal domain Rad51 N-terminal domain-like 11
Zinc beta-ribbon Zinc beta-ribbon 11
Bacterial muramidases Lysozyme-like 11
Multiheme cytochromes TPR-like 11
P-loop containing nucleoside triphosphate hydrolases TrpR-like 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
YjeF N-terminal domain-like Ribokinase-like 11
Class II aaRS and biotin synthetases GAD domain-like 11
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 11
NAD(P)-binding Rossmann-fold domains MurD-like peptide ligases, peptide-binding domain 11
Homocysteine S-methyltransferase Methionine synthase domain 11
Sm-like ribonucleoproteins Mechanosensitive channel protein MscS (YggB), C-terminal domain 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
Nucleotidyltransferase substrate binding subunit/domain Poly A polymerase C-terminal region-like 11
Transcription factor NusA, N-terminal domain Prokaryotic type KH domain (KH-domain type II) 11
"Winged helix" DNA-binding domain Bet v1-like 11
Homocysteine S-methyltransferase Methionine synthase activation domain-like 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 11
Nucleic acid-binding proteins Anticodon-binding domain of PheRS 11
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 11
Thioredoxin-like FAD/NAD(P)-binding domain 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
FMN-linked oxidoreductases FAD/NAD(P)-binding domain 11
Carbohydrate binding domain (Trans)glycosidases 11
Dihydropteroate synthetase-like Cobalamin (vitamin B12)-binding domain 11
Thioredoxin-like TPR-like 11
Fe-S cluster assembly (FSCA) domain-like P-loop containing nucleoside triphosphate hydrolases 11
Homocysteine S-methyltransferase Cobalamin (vitamin B12)-binding domain 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
dUTPase-like dUTPase-like 11
RBP11-like subunits of RNA polymerase C-terminal domain of RNA polymerase alpha subunit 11
RuvA domain 2-like RuvA domain 2-like 11
Nucleotidylyl transferase Riboflavin kinase-like 11
Translation proteins PRC-barrel domain 11
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 11
Tetrapyrrole methylase S-adenosyl-L-methionine-dependent methyltransferases 11
Thioredoxin-like Six-hairpin glycosidases 11
lambda repressor-like DNA-binding domains PUA domain-like 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 11
"Winged helix" DNA-binding domain LexA/Signal peptidase 11
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 11
Homeodomain-like Methylated DNA-protein cysteine methyltransferase domain 11
PheT/TilS domain Putative DNA-binding domain 11
Translation proteins Translation proteins 11
YlxR-like L30e-like 11
Acylphosphatase/BLUF domain-like YrdC/RibB 11
Nucleotidylyl transferase tRNA-binding arm 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
Rho N-terminal domain-like Nucleic acid-binding proteins 11
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 11
CO dehydrogenase ISP C-domain like FAD-binding/transporter-associated domain-like 11
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 11
Nucleotide-binding domain FAD/NAD(P)-binding domain 11
Peptidase/esterase 'gauge' domain alpha/beta-Hydrolases 11
Carbohydrate binding domain Fibronectin type III 11
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 11
Ribonuclease H-like mu transposase, C-terminal domain 11
Putative DNA-binding domain Anticodon-binding domain of PheRS 11
Pectin lyase-like Autotransporter 11
Pectin lyase-like Pectin lyase-like 11
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 11
Glutathione synthetase ATP-binding domain-like PH0987 N-terminal domain-like 11
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 11
Nucleotidyltransferase substrate binding subunit/domain Nucleotidyltransferase substrate binding subunit/domain 11
NAD(P)-binding Rossmann-fold domains UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 11
alpha/beta-Hydrolases alpha/beta-Hydrolases 11
Succinyl-CoA synthetase domains Acyl-CoA N-acyltransferases (Nat) 11
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 11
Protein kinase-like (PK-like) HCP-like 11
RuvA domain 2-like DNA helicase RuvA subunit, C-terminal domain 11
Cytochrome c oxidase subunit II-like, transmembrane region Cupredoxins 11
CheY-like CheY-like 11
TolB, N-terminal domain Tricorn protease N-terminal domain 11
TGS-like Class II aaRS and biotin synthetases 11
"Winged helix" DNA-binding domain Acetyl-CoA synthetase-like 11
MurCD N-terminal domain MurD-like peptide ligases, peptide-binding domain 11
CO dehydrogenase ISP C-domain like CO dehydrogenase flavoprotein C-terminal domain-like 11
FAD-binding/transporter-associated domain-like Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain 11
N-terminal domain of DnaB helicase P-loop containing nucleoside triphosphate hydrolases 11
FAD-linked reductases, C-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 11
CO dehydrogenase ISP C-domain like Bet v1-like 11
PreATP-grasp domain Cyclophilin-like 11
Transcription factor NusA, N-terminal domain Nucleic acid-binding proteins 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
Sigma3 and sigma4 domains of RNA polymerase sigma factors CheY-like 11
YrdC/RibB RibA-like 11
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 11
Carbon-nitrogen hydrolase Adenine nucleotide alpha hydrolases-like 11
Thioredoxin-like Nqo1C-terminal domain-like 11
S-adenosyl-L-methionine-dependent methyltransferases FMN-dependent nitroreductase-like 11
ABC transporter involved in vitamin B12 uptake, BtuC ABC transporter involved in vitamin B12 uptake, BtuC 11
Alpha-L RNA-binding motif S-adenosyl-L-methionine-dependent methyltransferases 11
PPK N-terminal domain-like PHP14-like 11
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex alpha/beta-Hydrolases 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
ACT-like Formyltransferase 11
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 11
HAD-like Acyl-CoA N-acyltransferases (Nat) 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
CO dehydrogenase ISP C-domain like CO dehydrogenase molybdoprotein N-domain-like 11
FAD-linked oxidoreductase ALDH-like 11
CarD-like TRCF domain-like 11
SGNH hydrolase Autotransporter 11
CoA-dependent acyltransferases S-adenosyl-L-methionine-dependent methyltransferases 11
Nucleotidyltransferase substrate binding subunit/domain ACT-like 11
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 11
lambda repressor-like DNA-binding domains RibA-like 11
Molybdenum cofactor biosynthesis proteins MoeA C-terminal domain-like 11
TGS-like ThrRS/AlaRS common domain 11
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 11
Homeodomain-like SIS domain 11
(Trans)glycosidases beta-Roll 11
Thioredoxin-like Nqo1 FMN-binding domain-like 11
Dihydropteroate synthetase-like Methionine synthase domain 11
Putative DNA-binding domain mu transposase, C-terminal domain 11
lambda repressor-like DNA-binding domains YrdC/RibB 11
P-loop containing nucleoside triphosphate hydrolases HRDC-like 11
TK C-terminal domain-like Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 11
4Fe-4S ferredoxins Respiratory nitrate reductase 1 gamma chain 11
Serine metabolism enzymes domain ACT-like 11
PPK N-terminal domain-like Phospholipase D/nuclease 11
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 11
Homeodomain-like mu transposase, C-terminal domain 11
AF0104/ALDC/Ptd012-like AF0104/ALDC/Ptd012-like 11
Dihydropteroate synthetase-like Methionine synthase activation domain-like 11
Glutathione synthetase ATP-binding domain-like Cyclophilin-like 11
Nucleic acid-binding proteins DNA helicase RuvA subunit, C-terminal domain 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
TPR-like HCP-like 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
4Fe-4S ferredoxins Iron-sulfur subunit of formate dehydrogenase N, transmembrane anchor 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 11
Voltage-gated potassium channels cAMP-binding domain-like 11
Diaminopimelate epimerase-like Diaminopimelate epimerase-like 11
beta-lactamase/transpeptidase-like SpoIIaa-like 11
P-loop containing nucleoside triphosphate hydrolases CarD-like 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
2Fe-2S ferredoxin-like CO dehydrogenase molybdoprotein N-domain-like 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain ACT-like 11
Transmembrane di-heme cytochromes a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 11
"Winged helix" DNA-binding domain Chorismate lyase-like 11
Thiamin diphosphate-binding fold (THDP-binding) Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 11
Nudix "Winged helix" DNA-binding domain 11
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 11
PIN domain-like Ribonuclease H-like 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
Glycoside hydrolase/deacetylase UraD-Like 11
Metallo-dependent phosphatases 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
Homeodomain-like Ribonuclease H-like 11
Zinc beta-ribbon DNA primase core 11
Class II aaRS and biotin synthetases Translation proteins 11
Molybdenum cofactor biosynthesis proteins Nucleotide-diphospho-sugar transferases 11
N-acetylmuramoyl-L-alanine amidase-like PGBD-like 11
Aspartate/glutamate racemase Aspartate/glutamate racemase 11
Cupredoxins Integrin alpha N-terminal domain 11
Putative DNA-binding domain Ribonuclease H-like 11
NAD(P)-binding Rossmann-fold domains Dimeric alpha+beta barrel 11
beta-Barrel protease inhibitors beta-Barrel protease inhibitors 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FMN-linked oxidoreductases 11
Methionine synthase domain Methionine synthase activation domain-like 11
GIY-YIG endonuclease C-terminal UvrC-binding domain of UvrB 11
5' to 3' exonuclease, C-terminal subdomain DNA/RNA polymerases 11
Nqo5-like HydB/Nqo4-like 11
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 11
N-terminal domain of bifunctional PutA protein ALDH-like 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 11
Regulatory protein AraC Homeodomain-like 11
Homo-oligomeric flavin-containing Cys decarboxylases, HFCD CoaB-like 11
EspE N-terminal domain-like EspE N-terminal domain-like 11
2Fe-2S ferredoxin-like CO dehydrogenase flavoprotein C-terminal domain-like 11
Bacterial luciferase-like Restriction endonuclease-like 11
Formyltransferase FMT C-terminal domain-like 11
S-adenosyl-L-methionine-dependent methyltransferases ACP-like 11
P-loop containing nucleoside triphosphate hydrolases Zinc beta-ribbon 11
Homocysteine S-methyltransferase Dihydropteroate synthetase-like 11
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Fibronectin type III (Trans)glycosidases 11
Tryptophan synthase beta subunit-like PLP-dependent enzymes ACT-like 11
Nucleic acid-binding proteins Putative DNA-binding domain 11
FMN-linked oxidoreductases Alpha subunit of glutamate synthase, C-terminal domain 11
lambda repressor-like DNA-binding domains Cyanase C-terminal domain 11
Adenine nucleotide alpha hydrolases-like GAF domain-like 11
Phage tail proteins Phage tail proteins 11
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 11
Acetyl-CoA synthetase-like NAD(P)-binding Rossmann-fold domains 11
Aconitase iron-sulfur domain LeuD/IlvD-like 11
DNA breaking-rejoining enzymes DNA breaking-rejoining enzymes 11
HMA, heavy metal-associated domain Metal cation-transporting ATPase, ATP-binding domain N 11
Formylmethanofuran:tetrahydromethanopterin formyltransferase Formylmethanofuran:tetrahydromethanopterin formyltransferase 11
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 11
Glucocorticoid receptor-like (DNA-binding domain) P-loop containing nucleoside triphosphate hydrolases 11
GAF domain-like Phosphohistidine domain 11
Aminoacid dehydrogenase-like, N-terminal domain Isocitrate/Isopropylmalate dehydrogenase-like 11
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 11
NagB/RpiA/CoA transferase-like NagB/RpiA/CoA transferase-like 11
FAD/NAD(P)-binding domain HI0933 insert domain-like 11
MoeA N-terminal region -like MoeA C-terminal domain-like 11
TrkA C-terminal domain-like TrkA C-terminal domain-like 11
FAD/NAD(P)-binding domain S-adenosyl-L-methionine-dependent methyltransferases 11
Subtilisin-like Metalloproteases ("zincins"), catalytic domain 11
ACP-like FMN-dependent nitroreductase-like 11
Rudiment single hybrid motif PH0987 N-terminal domain-like 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
Glutamine synthetase/guanido kinase GatB/YqeY motif 11
RNase III domain-like dsRNA-binding domain-like 11
PheT/TilS domain Class II aaRS and biotin synthetases 11
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 11
Prokaryotic type I DNA topoisomerase Zinc beta-ribbon 11
Carbamate kinase-like PUA domain-like 11
Class II aaRS and biotin synthetases C-terminal domain of transcriptional repressors 11
Trimeric LpxA-like enzymes Trimeric LpxA-like enzymes 11
S-adenosyl-L-methionine-dependent methyltransferases DNA methylase specificity domain 11
Methylated DNA-protein cysteine methyltransferase domain Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
PDZ domain-like ClpP/crotonase 11
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
DNA-glycosylase Nudix 11
DNA clamp DNA clamp 11
Nucleotide-diphospho-sugar transferases RmlC-like cupins 11
PHP14-like Phospholipase D/nuclease 11
TerB-like Chaperone J-domain 11
NAD(P)-binding Rossmann-fold domains Acyl-CoA N-acyltransferases (Nat) 11
DnaK suppressor protein DksA, alpha-hairpin domain Glucocorticoid receptor-like (DNA-binding domain) 11
Nucleic acid-binding proteins BRCT domain 11
Cyanovirin-N Cyanovirin-N 11
Homeodomain-like Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
FAD/NAD(P)-binding domain Nitrite and sulphite reductase 4Fe-4S domain-like 11
OmpA-like Staphylococcal nuclease 11
N-terminal domain of bifunctional PutA protein FAD-linked oxidoreductase 11
CO dehydrogenase molybdoprotein N-domain-like Cytochrome c 11
CO dehydrogenase ISP C-domain like Molybdenum cofactor-binding domain 11
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
HAMP domain-like PP2C-like 11
Tex N-terminal region-like RuvA domain 2-like 11
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 11
Cyclophilin-like Single hybrid motif 11
Macro domain-like Zn-dependent exopeptidases 11
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 11
NagB/RpiA/CoA transferase-like alpha-helical ferredoxin 11
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of B transposition protein 11
Glutathione synthetase ATP-binding domain-like Acyl-CoA N-acyltransferases (Nat) 11
HD-domain/PDEase-like Nucleotidyltransferase 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
5' to 3' exonuclease, C-terminal subdomain Ribonuclease H-like 11
FAD/NAD-linked reductases, dimerisation (C-terminal) domain FabD/lysophospholipase-like 11
Single hybrid motif Thiamin diphosphate-binding fold (THDP-binding) 11
PreATP-grasp domain PH0987 N-terminal domain-like 11
Trigger factor ribosome-binding domain FKBP-like 11
ARM repeat ARM repeat 11
Urease, gamma-subunit Urease, beta-subunit 11
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 11
beta-lactamase/transpeptidase-like cAMP-binding domain-like 11
cAMP-binding domain-like PP2C-like 11
Glutathione synthetase ATP-binding domain-like Phosphoenolpyruvate/pyruvate domain 11
SpoIIaa-like cAMP-binding domain-like 11
Thioredoxin-like Nqo1 middle domain-like 11
GreA transcript cleavage protein, N-terminal domain FKBP-like 11
Hsp33 domain HSP33 redox switch-like 11
FAD/NAD(P)-binding domain Nitrite/Sulfite reductase N-terminal domain-like 11
lambda repressor-like DNA-binding domains C-terminal domain of B transposition protein 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 11
GAF domain-like EAL domain-like 11
Ribonuclease H-like RuvA domain 2-like 11
Adenine nucleotide alpha hydrolases-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
S-adenosyl-L-methionine-dependent methyltransferases S-adenosyl-L-methionine-dependent methyltransferases 11
Putative DNA-binding domain Homeodomain-like 11
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
Eukaryotic type KH-domain (KH-domain type I) Nucleic acid-binding proteins 11
Carbamate kinase-like ACT-like 11
Tex N-terminal region-like Nucleic acid-binding proteins 11
MurCD N-terminal domain MurD-like peptide ligases, catalytic domain 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 11
TGS-like ACT-like 11
Pheromone-binding domain of LuxR-like quorum-sensing transcription factors C-terminal effector domain of the bipartite response regulators 11
Nucleotide-diphospho-sugar transferases IpsF-like 11
Tex N-terminal region-like Ribonuclease H-like 11
vWA-like TPR-like 11
SMAD/FHA domain Trypsin-like serine proteases 11
Ribonuclease H-like DNA/RNA polymerases 11
"Winged helix" DNA-binding domain Phosphotyrosine protein phosphatases I 11
6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 11

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