SUPERFAMILY 1.75 HMM library and genome assignments server

Domain combination pairs in Marinomonas sp. MWYL1

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

  • For a list of unique full length architectures for this genome click here (can be slow).
Adjacent domain pairs graph

Graph of adjacent domain pairs.


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Domain combination pairs

733 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
"Winged helix" DNA-binding domain Periplasmic binding protein-like II 932
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 4625
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 3813
Homeodomain-like Homeodomain-like 266
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 253
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 236
P-loop containing nucleoside triphosphate hydrolases MOP-like 232
Actin-like ATPase domain Actin-like ATPase domain 185
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 186
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 176
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheY-like 1616
CheY-like C-terminal effector domain of the bipartite response regulators 162
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 1515
Nucleotide cyclase EAL domain-like 158
Homodimeric domain of signal transducing histidine kinase CheY-like 1515
GroES-like NAD(P)-binding Rossmann-fold domains 144
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 1414
Thiolase-like Thiolase-like 142
"Winged helix" DNA-binding domain Dimeric alpha+beta barrel 141
RmlC-like cupins Homeodomain-like 132
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 132
lambda repressor-like DNA-binding domains Periplasmic binding protein-like I 131
"Winged helix" DNA-binding domain GntR ligand-binding domain-like 121
Homeodomain-like Tetracyclin repressor-like, C-terminal domain 121
CheY-like P-loop containing nucleoside triphosphate hydrolases 113
PYP-like sensor domain (PAS domain) PYP-like sensor domain (PAS domain) 117
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 103
Homodimeric domain of signal transducing histidine kinase Histidine-containing phosphotransfer domain, HPT domain 109
PYP-like sensor domain (PAS domain) Nucleotide cyclase 106
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 103
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 104
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 105
Thioredoxin-like GST C-terminal domain-like 101
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Histidine-containing phosphotransfer domain, HPT domain 109
Composite domain of metallo-dependent hydrolases Metallo-dependent hydrolases 95
PYP-like sensor domain (PAS domain) CheY-like 99
MetI-like MetI-like 93
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 85
CheY-like Histidine-containing phosphotransfer domain, HPT domain 88
CoA-dependent acyltransferases CoA-dependent acyltransferases 87
PYP-like sensor domain (PAS domain) Methyl-accepting chemotaxis protein (MCP) signaling domain 83
"Winged helix" DNA-binding domain PLP-dependent transferases 82
CheY-like Homeodomain-like 81
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 84
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 84
ACP-like CoA-dependent acyltransferases 87
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein S5 domain 2-like 75
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 71
P-loop containing nucleoside triphosphate hydrolases Translation proteins 76
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 77
CheY-like CheY-like 77
"Winged helix" DNA-binding domain GAF domain-like 71
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 72
(Trans)glycosidases Glycosyl hydrolase domain 76
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB transmembrane domain 64
2Fe-2S ferredoxin-like Riboflavin synthase domain-like 62
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 61
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 65
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 64
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 64
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 64
Alpha-L RNA-binding motif Pseudouridine synthase 62
"Winged helix" DNA-binding domain NagB/RpiA/CoA transferase-like 61
HAMP domain-like Homodimeric domain of signal transducing histidine kinase 62
Acetyl-CoA synthetase-like ACP-like 65
HAMP domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 62
Acetyl-CoA synthetase-like CoA-dependent acyltransferases 65
CheY-like Nucleotide cyclase 64
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB transmembrane domain 64
PLP-binding barrel Alanine racemase C-terminal domain-like 62
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 63
PYP-like sensor domain (PAS domain) Histidine-containing phosphotransfer domain, HPT domain 66
2Fe-2S ferredoxin-like Ferredoxin reductase-like, C-terminal NADP-linked domain 62
Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase C-terminal domain-like 52
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 53
"Winged helix" DNA-binding domain Chorismate lyase-like 51
Class I glutamine amidotransferase-like Homeodomain-like 51
Aldolase post-HMGL domain-like 53
TPR-like TPR-like 55
ISP domain Bet v1-like 51
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 52
Class II aaRS and biotin synthetases Class II aaRS ABD-related 53
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 41
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 41
PYP-like sensor domain (PAS domain) EAL domain-like 43
gp5 N-terminal domain-like Phage fibre proteins 42
Regulatory protein AraC Homeodomain-like 41
PreATP-grasp domain Rudiment single hybrid motif 41
Translation proteins EF-G C-terminal domain-like 43
Sensory domain-like Methyl-accepting chemotaxis protein (MCP) signaling domain 42
NAD(P)-binding Rossmann-fold domains UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 41
EF-G C-terminal domain-like EF-G C-terminal domain-like 43
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 44
Nucleic acid-binding proteins Nucleic acid-binding proteins 43
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 44
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 41
Sm-like ribonucleoproteins Mechanosensitive channel protein MscS (YggB), C-terminal domain 43
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 41
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 44
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 44
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 44
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 42
6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 41
Adenine nucleotide alpha hydrolases-like DHS-like NAD/FAD-binding domain 42
CheY-like EAL domain-like 33
CBS-domain pair FAD-binding/transporter-associated domain-like 31
Lysozyme-like beta-lactamase/transpeptidase-like 33
Phospholipase D/nuclease Phospholipase D/nuclease 33
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 33
Acetyl-CoA synthetase-like Acetyl-CoA synthetase-like 33
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 31
Single hybrid motif CoA-dependent acyltransferases 33
Enolase N-terminal domain-like Enolase C-terminal domain-like 31
Nucleic acid-binding proteins Translation proteins SH3-like domain 32
Phage tail proteins Phage tail proteins 31
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 32
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 32
Homeodomain-like SIS domain 31
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 32
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 32
EF-G C-terminal domain-like Ribosomal protein S5 domain 2-like 32
Triger factor/SurA peptide-binding domain-like FKBP-like 33
PurM N-terminal domain-like PurM C-terminal domain-like 32
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 32
Nucleotidyltransferase HD-domain/PDEase-like 33
Metallo-dependent phosphatases 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain 32
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 33
Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), C-terminal domain 32
NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains 33
4'-phosphopantetheinyl transferase 4'-phosphopantetheinyl transferase 31
GAF domain-like Homeodomain-like 32
ACP-like ACP-like 33
Phage tail proteins Phage fibre proteins 31
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 31
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 31
CheY-like TPR-like 32
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 32
Diaminopimelate epimerase-like Diaminopimelate epimerase-like 31
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex CoA-dependent acyltransferases 33
Phage tail proteins gp5 N-terminal domain-like 31
CheY-like HD-domain/PDEase-like 31
(Trans)glycosidases Beta-D-glucan exohydrolase, C-terminal domain 32
Sensory domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 33
6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 32
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 32
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 32
ACT-like ACT-like 32
Cytochrome c Cytochrome c 31
Single hybrid motif Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 33
Nucleic acid-binding proteins RuvA domain 2-like 33
GAF domain-like P-loop containing nucleoside triphosphate hydrolases 32
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 22
ACT-like Formyltransferase 21
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 21
PUA domain-like Ribosomal protein S5 domain 2-like 21
FMN-linked oxidoreductases FAD/NAD(P)-binding domain 22
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 22
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 22
CoA-dependent acyltransferases alpha/beta-Hydrolases 21
Galactose mutarotase-like E set domains 21
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 22
GAF domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 22
CBS-domain pair MgtE membrane domain-like 21
FAD-binding/transporter-associated domain-like alpha-helical ferredoxin 22
PDZ domain-like ClpP/crotonase 21
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 22
Histidine-containing phosphotransfer domain, HPT domain CheW-like 21
Calcium ATPase, transduction domain A HAD-like 22
GAF domain-like Nucleotide cyclase 22
CheW-like CheY-like 21
FAD/NAD(P)-binding domain HI0933 insert domain-like 21
Cryptochrome/photolyase, N-terminal domain Cryptochrome/photolyase FAD-binding domain 21
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 22
Aspartate/glutamate racemase Aspartate/glutamate racemase 21
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 22
Nitrite/Sulfite reductase N-terminal domain-like Nitrite/Sulfite reductase N-terminal domain-like 21
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 21
CheY-like PP2C-like 22
HD-domain/PDEase-like ACT-like 22
Nitrite and sulphite reductase 4Fe-4S domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 21
Translation proteins Ribosomal protein S5 domain 2-like 21
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 21
CheY-like Methylesterase CheB, C-terminal domain 21
NAD(P)-binding Rossmann-fold domains ACT-like 22
Formate dehydrogenase/DMSO reductase, domains 1-3 ADC-like 22
Periplasmic binding protein-like II ACT-like 22
Trypsin-like serine proteases PDZ domain-like 22
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 22
lambda repressor-like DNA-binding domains RmlC-like cupins 21
Translation proteins ThrRS/AlaRS common domain 22
Sensory domain-like Sensory domain-like 22
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 22
P-loop containing nucleoside triphosphate hydrolases Restriction endonuclease-like 22
Calcium ATPase, transmembrane domain M HAD-like 22
Glucocorticoid receptor-like (DNA-binding domain) P-loop containing nucleoside triphosphate hydrolases 22
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 22
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 22
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 22
post-HMGL domain-like Single hybrid motif 21
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 22
Homeodomain-like Methylated DNA-protein cysteine methyltransferase domain 22
cAMP-binding domain-like "Winged helix" DNA-binding domain 21
Rhodanese/Cell cycle control phosphatase Rhodanese/Cell cycle control phosphatase 22
FAD-linked oxidases, C-terminal domain alpha-helical ferredoxin 22
Nucleotidyltransferase Poly A polymerase C-terminal region-like 21
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 22
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 22
tRNA-binding arm Class II aaRS and biotin synthetases 21
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 22
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 22
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 21
Class II aaRS and biotin synthetases ThrRS/AlaRS common domain 22
HMA, heavy metal-associated domain HAD-like 22
Ribonuclease H-like DNA/RNA polymerases 22
PYP-like sensor domain (PAS domain) P-loop containing nucleoside triphosphate hydrolases 21
MurCD N-terminal domain MurD-like peptide ligases, catalytic domain 21
Glycerol-3-phosphate (1)-acyltransferase Acyl-CoA N-acyltransferases (Nat) 21
YjeF N-terminal domain-like Ribokinase-like 21
Formyltransferase FMT C-terminal domain-like 21
post-HMGL domain-like 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 21
EAL domain-like HD-domain/PDEase-like 21
PDZ domain-like PDZ domain-like 22
E set domains (Trans)glycosidases 22
FAD/NAD(P)-binding domain Thioredoxin-like 22
Zinc beta-ribbon Zinc beta-ribbon 22
HD-domain/PDEase-like TGS-like 22
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 22
Isochorismatase-like hydrolases ACP-like 21
ACP-like alpha/beta-Hydrolases 21
cAMP-binding domain-like CBS-domain pair 21
NAD(P)-binding Rossmann-fold domains TrkA C-terminal domain-like 22
MurCD N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
Periplasmic binding protein-like II Homodimeric domain of signal transducing histidine kinase 21
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 22
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 22
Homodimeric domain of signal transducing histidine kinase CheW-like 21
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 21
Chemotaxis receptor methyltransferase CheR, N-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 21
Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 22
MgtE N-terminal domain-like MgtE membrane domain-like 21
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 22
Penicillin binding protein dimerisation domain beta-lactamase/transpeptidase-like 21
Nucleotidyltransferase TGS-like 22
Nucleotidyltransferase ACT-like 22
Homeodomain-like Probable bacterial effector-binding domain 21
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 21
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
Single hybrid motif Single hybrid motif 22
MgtE N-terminal domain-like CBS-domain pair 21
Periplasmic binding protein-like II ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 21
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 21
Chaperone J-domain HSP40/DnaJ peptide-binding domain 22
Methylated DNA-protein cysteine methyltransferase domain Methylated DNA-protein cysteine methyltransferase, C-terminal domain 22
Carbamate kinase-like ACT-like 22
GreA transcript cleavage protein, N-terminal domain FKBP-like 22
Acetyl-CoA synthetase-like alpha/beta-Hydrolases 21
PYP-like sensor domain (PAS domain) Homeodomain-like 21
Sensory domain-like Nucleotide cyclase 22
Sensory domain-like PYP-like sensor domain (PAS domain) 22
Homeodomain-like Methylated DNA-protein cysteine methyltransferase, C-terminal domain 22
Nucleotidyltransferase Nucleotidyltransferase substrate binding subunit/domain 22
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 21
Aldolase Single hybrid motif 21
Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha) Thioredoxin-like 21
Folate-binding domain Aminomethyltransferase beta-barrel domain 22
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheW-like 21
LeuD/IlvD-like Aconitase iron-sulfur domain 22
GAF domain-like PYP-like sensor domain (PAS domain) 22
CheY-like "Winged helix" DNA-binding domain 11
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Eukaryotic type KH-domain (KH-domain type I) 11
Urease metallochaperone UreE, N-terminal domain Urease metallochaperone UreE, C-terminal domain 11
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 11
Macro domain-like Zn-dependent exopeptidases 11
Tetrapyrrole methylase S-adenosyl-L-methionine-dependent methyltransferases 11
Rad51 N-terminal domain-like Rad51 N-terminal domain-like 11
FMN-linked oxidoreductases Nucleotide-binding domain 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
Sensory domain-like Homodimeric domain of signal transducing histidine kinase 11
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 11
Tetrahydrobiopterin biosynthesis enzymes-like Tetrahydrobiopterin biosynthesis enzymes-like 11
P-loop containing nucleoside triphosphate hydrolases TrpR-like 11
PheT/TilS domain Putative DNA-binding domain 11
E set domains Glycosyl hydrolase domain 11
Translation proteins Initiation factor IF2/eIF5b, domain 3 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
"Winged helix" DNA-binding domain Actin-like ATPase domain 11
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 11
HMA, heavy metal-associated domain HMA, heavy metal-associated domain 11
Sensory domain-like Sporulation response regulatory protein Spo0B 11
MetI-like P-loop containing nucleoside triphosphate hydrolases 11
beta-lactamase/transpeptidase-like Penicillin-binding protein associated domain 11
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
(Phosphotyrosine protein) phosphatases II NAD kinase/diacylglycerol kinase-like 11
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 11
Chorismate mutase II ACT-like 11
Chorismate mutase II Periplasmic binding protein-like II 11
PLP-dependent transferases PLP-dependent transferases 11
Homocysteine S-methyltransferase Dihydropteroate synthetase-like 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain ACT-like 11
Flavoproteins Riboflavin synthase domain-like 11
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
DNA methylase specificity domain DNA methylase specificity domain 11
ParB/Sulfiredoxin KorB DNA-binding domain-like 11
"Winged helix" DNA-binding domain Class II aaRS and biotin synthetases 11
TPR-like P-loop containing nucleoside triphosphate hydrolases 11
Nucleotidylyl transferase Ribosomal protein L25-like 11
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 11
Class I glutamine amidotransferase-like Glycosyl hydrolase domain 11
PH0987 N-terminal domain-like Cyclophilin-like 11
P-loop containing nucleoside triphosphate hydrolases Acyl-CoA N-acyltransferases (Nat) 11
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 11
CRISPR-associated protein CRISPR-associated protein 11
DsbC/DsbG N-terminal domain-like Thioredoxin-like 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleotidylyl transferase 11
HlyD-like secretion proteins HlyD-like secretion proteins 11
4Fe-4S ferredoxins ADC-like 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 11
P-loop containing nucleoside triphosphate hydrolases Isocitrate/Isopropylmalate dehydrogenase-like 11
alpha-helical ferredoxin Nucleotide-binding domain 11
Transcription factor NusA, N-terminal domain Rad51 N-terminal domain-like 11
PreATP-grasp domain PreATP-grasp domain 11
Dihydropteroate synthetase-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
N-terminal domain of DnaB helicase P-loop containing nucleoside triphosphate hydrolases 11
Nucleotidyltransferase PAP/OAS1 substrate-binding domain 11
FGAM synthase PurL, linker domain PurM C-terminal domain-like 11
Thioesterase/thiol ester dehydrase-isomerase Thioesterase/thiol ester dehydrase-isomerase 11
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 11
MOP-like MOP-like 11
Ribonuclease H-like Nucleic acid-binding proteins 11
TerB-like Chaperone J-domain 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Nucleic acid-binding proteins 11
TGS-like ACT-like 11
Putative DNA-binding domain LexA/Signal peptidase 11
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 11
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 11
Nucleic acid-binding proteins DNA helicase RuvA subunit, C-terminal domain 11
PIN domain-like Ribonuclease H-like 11
S-adenosyl-L-methionine-dependent methyltransferases ACP-like 11
MoeA N-terminal region -like MoeA C-terminal domain-like 11
"Winged helix" DNA-binding domain HCP-like 11
Rhodanese/Cell cycle control phosphatase FAD/NAD(P)-binding domain 11
PIN domain-like P-loop containing nucleoside triphosphate hydrolases 11
RBP11-like subunits of RNA polymerase C-terminal domain of RNA polymerase alpha subunit 11
Cadherin-like Cadherin-like 11
NagB/RpiA/CoA transferase-like NagB/RpiA/CoA transferase-like 11
GAF domain-like Phosphohistidine domain 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
YhbC-like, N-terminal domain YhbC-like, C-terminal domain 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 11
HRDC-like HRDC-like 11
Protein kinase-like (PK-like) C-type lectin-like 11
Eukaryotic type KH-domain (KH-domain type I) Nucleic acid-binding proteins 11
FAD-binding/transporter-associated domain-like CO dehydrogenase flavoprotein C-terminal domain-like 11
PHP domain-like AF1531-like 11
Nudix Nudix 11
Dihydropteroate synthetase-like Methionine synthase domain 11
5' to 3' exonuclease, C-terminal subdomain Ribonuclease H-like 11
Carbamate kinase-like Acyl-CoA N-acyltransferases (Nat) 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FMN-linked oxidoreductases 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Alpha subunit of glutamate synthase, C-terminal domain 11
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Nucleic acid-binding proteins 11
FAD/NAD(P)-binding domain Nitrite and sulphite reductase 4Fe-4S domain-like 11
ClpP/crotonase 6-phosphogluconate dehydrogenase C-terminal domain-like 11
Periplasmic binding protein-like II HD-domain/PDEase-like 11
TTHA1013/TTHA0281-like lambda repressor-like DNA-binding domains 11
PurM N-terminal domain-like Class I glutamine amidotransferase-like 11
DPP6 N-terminal domain-like Putative isomerase YbhE 11
RuvA domain 2-like JAB1/MPN domain 11
2Fe-2S ferredoxin-like ADC-like 11
Glutamine synthetase/guanido kinase GatB/YqeY motif 11
DPP6 N-terminal domain-like Cadherin-like 11
CO dehydrogenase molybdoprotein N-domain-like Molybdenum cofactor-binding domain 11
P-loop containing nucleoside triphosphate hydrolases TGS-like 11
Nucleic acid-binding proteins S-adenosyl-L-methionine-dependent methyltransferases 11
PurS-like Class I glutamine amidotransferase-like 11
PurS-like FGAM synthase PurL, linker domain 11
MoeA N-terminal region -like Molybdenum cofactor biosynthesis proteins 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
Adenine nucleotide alpha hydrolases-like Rhodanese/Cell cycle control phosphatase 11
Class II aaRS and biotin synthetases C-terminal domain of transcriptional repressors 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphohistidine domain 11
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 11
Homocysteine S-methyltransferase Methionine synthase domain 11
GAF domain-like CheY-like 11
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 11
Homocysteine S-methyltransferase Methionine synthase activation domain-like 11
Tex N-terminal region-like Nucleic acid-binding proteins 11
4Fe-4S ferredoxins Respiratory nitrate reductase 1 gamma chain 11
P-loop containing nucleoside triphosphate hydrolases Hypothetical protein YjiA, C-terminal domain 11
Ammonium transporter PYP-like sensor domain (PAS domain) 11
OMPA-like OmpA-like 11
Nucleic acid-binding proteins ArfGap/RecO-like zinc finger 11
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 11
Methionine synthase domain Methionine synthase activation domain-like 11
PurS-like PurM N-terminal domain-like 11
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 11
2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain Alkaline phosphatase-like 11
2Fe-2S ferredoxin-like CO dehydrogenase ISP C-domain like 11
Ammonium transporter Nucleotide cyclase 11
Molybdenum cofactor biosynthesis proteins MoeA C-terminal domain-like 11
beta-Galactosidase/glucuronidase domain (Trans)glycosidases 11
Aconitase B, N-terminal domain LeuD/IlvD-like 11
TGS-like Class II aaRS and biotin synthetases 11
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 11
Fumarylacetoacetate hydrolase, FAH, N-terminal domain FAH 11
Prokaryotic type KH domain (KH-domain type II) Rad51 N-terminal domain-like 11
Homo-oligomeric flavin-containing Cys decarboxylases, HFCD CoaB-like 11
Dihydropteroate synthetase-like Cobalamin (vitamin B12)-binding domain 11
Class II aaRS and biotin synthetases GAD domain-like 11
Nqo1 FMN-binding domain-like Nqo1 middle domain-like 11
P-loop containing nucleoside triphosphate hydrolases vWA-like 11
CheC-like Surface presentation of antigens (SPOA) 11
S13-like H2TH domain Glucocorticoid receptor-like (DNA-binding domain) 11
GroEL-intermediate domain like GroEL apical domain-like 11
Epsilon subunit of F1F0-ATP synthase N-terminal domain Epsilon subunit of F1F0-ATP synthase C-terminal domain 11
Ribonuclease H-like HRDC-like 11
GroES-like GroES-like 11
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 11
PP2C-like Protein kinase-like (PK-like) 11
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 11
Leukotriene A4 hydrolase N-terminal domain Metalloproteases ("zincins"), catalytic domain 11
N-terminal domain of MutM-like DNA repair proteins Glucocorticoid receptor-like (DNA-binding domain) 11
Nucleotidyltransferase substrate binding subunit/domain Nucleotidyltransferase substrate binding subunit/domain 11
PurM C-terminal domain-like Class I glutamine amidotransferase-like 11
L30e-like alpha/beta knot 11
S-adenosyl-L-methionine-dependent methyltransferases S-adenosyl-L-methionine-dependent methyltransferases 11
2Fe-2S ferredoxin-like 4Fe-4S ferredoxins 11
TGS-like Class II aaRS ABD-related 11
FliG FliG 11
lambda repressor-like DNA-binding domains LexA/Signal peptidase 11
Ligand-binding domain in the NO signalling and Golgi transport Homeodomain-like 11
Nucleic acid-binding proteins PheT/TilS domain 11
Ribokinase-like Nucleotidylyl transferase 11
Putative isomerase YbhE Cadherin-like 11
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 11
Troponin coil-coiled subunits Duplicated hybrid motif 11
Transcription factor NusA, N-terminal domain Nucleic acid-binding proteins 11
Carbon-nitrogen hydrolase Adenine nucleotide alpha hydrolases-like 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
Putative DNA-binding domain Anticodon-binding domain of PheRS 11
GroES-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 11
Flavoproteins Ferredoxin reductase-like, C-terminal NADP-linked domain 11
PHP14-like Phospholipase D/nuclease 11
Nucleotidyltransferase substrate binding subunit/domain HD-domain/PDEase-like 11
TolB, N-terminal domain Tricorn protease N-terminal domain 11
FAD/NAD(P)-binding domain Nitrite/Sulfite reductase N-terminal domain-like 11
5' to 3' exonuclease, C-terminal subdomain DNA/RNA polymerases 11
NTF2-like C-terminal effector domain of the bipartite response regulators 11
GAF domain-like Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 11
Rho N-terminal domain-like Nucleic acid-binding proteins 11
FAD/NAD(P)-binding domain Aminomethyltransferase beta-barrel domain 11
Glutathione synthetase ATP-binding domain-like Phosphoenolpyruvate/pyruvate domain 11
P-loop containing nucleoside triphosphate hydrolases CarD-like 11
Nqo1 FMN-binding domain-like Nqo1C-terminal domain-like 11
ALDH-like Thioesterase/thiol ester dehydrase-isomerase 11
DNA-glycosylase Nudix 11
Nucleic acid-binding proteins Anticodon-binding domain of PheRS 11
Ribonuclease H-like RuvA domain 2-like 11
Chaperone J-domain TPR-like 11
PGBD-like L,D-transpeptidase catalytic domain-like 11
alpha/beta-Hydrolases alpha/beta-Hydrolases 11
HAMP domain-like CheY-like 11
2Fe-2S ferredoxin-like FAD-binding/transporter-associated domain-like 11
NAD(P)-binding Rossmann-fold domains Glutamyl tRNA-reductase dimerization domain 11
Dimeric alpha+beta barrel Acyl-CoA N-acyltransferases (Nat) 11
ClpP/crotonase NAD(P)-binding Rossmann-fold domains 11
Thioredoxin-like Thioredoxin-like 11
Ribokinase-like Thiamin phosphate synthase 11
Flagellar hook protein flgE Flagellar hook protein flgE 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) Methylated DNA-protein cysteine methyltransferase domain 11
Nucleotidylyl transferase Nucleic acid-binding proteins 11
NAD(P)-binding Rossmann-fold domains EPT/RTPC-like 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
Adenine nucleotide alpha hydrolases-like Adenine nucleotide alpha hydrolases-like 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
vWA-like TPR-like 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 11
GIY-YIG endonuclease C-terminal UvrC-binding domain of UvrB 11
Class II aaRS and biotin synthetases SufE/NifU 11
FMN-linked oxidoreductases Alpha subunit of glutamate synthase, C-terminal domain 11
Glutamyl tRNA-reductase catalytic, N-terminal domain NAD(P)-binding Rossmann-fold domains 11
Transcription factor NusA, N-terminal domain Prokaryotic type KH domain (KH-domain type II) 11
CbiG N-terminal domain-like CobE/GbiG C-terminal domain-like 11
FGAM synthase PurL, linker domain Class I glutamine amidotransferase-like 11
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 11
PYP-like sensor domain (PAS domain) Sporulation response regulatory protein Spo0B 11
Alpha-L RNA-binding motif S-adenosyl-L-methionine-dependent methyltransferases 11
Nucleic acid-binding proteins Prokaryotic type KH domain (KH-domain type II) 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
Tex N-terminal region-like RuvA domain 2-like 11
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 11
NTF2-like Sec-C motif 11
FAD-binding/transporter-associated domain-like Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain 11
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
"Winged helix" DNA-binding domain MOP-like 11
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 11
Nucleotidylyl transferase Riboflavin kinase-like 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
Glutathione synthetase ATP-binding domain-like Succinyl-CoA synthetase domains 11
Galactose mutarotase-like (Trans)glycosidases 11
Nucleotidyltransferase substrate binding subunit/domain ACT-like 11
Acetyl-CoA synthetase-like Thioesterase/thiol ester dehydrase-isomerase 11
GroEL equatorial domain-like GroEL-intermediate domain like 11
Zinc beta-ribbon DNA primase core 11
all-alpha NTP pyrophosphatases all-alpha NTP pyrophosphatases 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
HAMP domain-like Nucleotide cyclase 11
RuvA domain 2-like BRCT domain 11
4Fe-4S ferredoxins Formate dehydrogenase/DMSO reductase, domains 1-3 11
N-terminal domain of bifunctional PutA protein FAD-linked oxidoreductase 11
2Fe-2S ferredoxin-like Formate dehydrogenase/DMSO reductase, domains 1-3 11
Trigger factor ribosome-binding domain FKBP-like 11
2Fe-2S ferredoxin-like alpha-helical ferredoxin 11
TPR-like Nucleotidylyl transferase 11
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 11
PPK N-terminal domain-like Phospholipase D/nuclease 11
MOSC N-terminal domain-like PK beta-barrel domain-like 11
Globin-like Ferredoxin reductase-like, C-terminal NADP-linked domain 11
Pectin lyase-like Cadherin-like 11
Ribosomal protein S5 domain 2-like HSP90 C-terminal domain 11
Ribosomal protein S5 domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
Aminopeptidase/glucanase lid domain Zn-dependent exopeptidases 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphoenolpyruvate/pyruvate domain 11
Aconitase B, N-terminal domain Aconitase iron-sulfur domain 11
Galactose-binding domain-like beta-Galactosidase/glucuronidase domain 11
"Winged helix" DNA-binding domain C-terminal domain of transcriptional repressors 11
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 11
Pentapeptide repeat-like Pentapeptide repeat-like 11
TrkA C-terminal domain-like TrkA C-terminal domain-like 11
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 11
ABC transporter involved in vitamin B12 uptake, BtuC ABC transporter involved in vitamin B12 uptake, BtuC 11
Translation proteins PRC-barrel domain 11
FAD/NAD(P)-binding domain Folate-binding domain 11
Calcium-dependent phosphotriesterase Nucleotide cyclase 11
Class II aaRS and biotin synthetases YbaK/ProRS associated domain 11
Rho N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
TrmE connector domain P-loop containing nucleoside triphosphate hydrolases 11
Ligand-binding domain in the NO signalling and Golgi transport P-loop containing nucleoside triphosphate hydrolases 11
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
Translation proteins Translation proteins 11
Methylglyoxal synthase-like Cytidine deaminase-like 11
lambda repressor-like DNA-binding domains Cyanase C-terminal domain 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
Putative DNA-binding domain Initiation factor IF2/eIF5b, domain 3 11
N-terminal domain of bifunctional PutA protein ALDH-like 11
Ribosomal protein L6 Ribosomal protein L6 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
6-phosphogluconate dehydrogenase C-terminal domain-like EPT/RTPC-like 11
GAF domain-like EAL domain-like 11
Ammonium transporter EAL domain-like 11
FAD-linked reductases, C-terminal domain 4Fe-4S ferredoxins 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) Homeodomain-like 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
FMN-binding split barrel "Winged helix" DNA-binding domain 11
DnaK suppressor protein DksA, alpha-hairpin domain Glucocorticoid receptor-like (DNA-binding domain) 11
Pseudouridine synthase PUA domain-like 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11
Periplasmic binding protein-like I Homeodomain-like 11
CoA-transferase family III (CaiB/BaiF) CoA-transferase family III (CaiB/BaiF) 11
Tex N-terminal region-like Ribonuclease H-like 11
2Fe-2S ferredoxin-like CO dehydrogenase flavoprotein C-terminal domain-like 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
Putative DNA-binding domain P-loop containing nucleoside triphosphate hydrolases 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 11
Carbamate kinase-like PUA domain-like 11
YbaK/ProRS associated domain Class II aaRS ABD-related 11
CBS-domain pair Nucleotide cyclase 11
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 11
Methionine synthase domain Cobalamin (vitamin B12)-binding domain 11
Riboflavin synthase domain-like Riboflavin synthase domain-like 11
CarD-like TRCF domain-like 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 11
CoA-dependent acyltransferases S-adenosyl-L-methionine-dependent methyltransferases 11
Calcium-dependent phosphotriesterase Calcium-dependent phosphotriesterase 11
Glutamyl tRNA-reductase catalytic, N-terminal domain Glutamyl tRNA-reductase dimerization domain 11
DNA ligase/mRNA capping enzyme, catalytic domain RuvA domain 2-like 11
Acetyl-CoA synthetase-like S-adenosyl-L-methionine-dependent methyltransferases 11
beta-Roll beta-Roll 11
Class II aaRS and biotin synthetases Translation proteins 11
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 11
Cobalamin (vitamin B12)-binding domain Methionine synthase activation domain-like 11
L domain-like Protein kinase-like (PK-like) 11
PheT/TilS domain Anticodon-binding domain of PheRS 11
NagB/RpiA/CoA transferase-like D-ribose-5-phosphate isomerase (RpiA), lid domain 11
THUMP domain-like Rhodanese/Cell cycle control phosphatase 11
Nucleotide-diphospho-sugar transferases RmlC-like cupins 11
HD-domain/PDEase-like HD-domain/PDEase-like 11
Cytochrome c oxidase subunit II-like, transmembrane region Cupredoxins 11
Barwin-like endoglucanases Sporulation related repeat 11
YajQ-like YajQ-like 11
Dihydropteroate synthetase-like Methionine synthase activation domain-like 11
HAMP domain-like PYP-like sensor domain (PAS domain) 11
RuvA domain 2-like DNA helicase RuvA subunit, C-terminal domain 11
Hsp33 domain HSP33 redox switch-like 11
R1 subunit of ribonucleotide reductase, N-terminal domain PFL-like glycyl radical enzymes 11
Galactose-binding domain-like (Trans)glycosidases 11
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 11
GAF domain-like Phosphoenolpyruvate/pyruvate domain 11
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 11
Nucleotidylyl transferase tRNA-binding arm 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
HAMP domain-like EAL domain-like 11
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 11
PreATP-grasp domain Methylglyoxal synthase-like 11
FAD-linked oxidoreductase ALDH-like 11
Nqo1 FMN-binding domain-like alpha-helical ferredoxin 11
FAD-linked reductases, C-terminal domain Thioredoxin-like 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
PurS-like PurM C-terminal domain-like 11
Pectin lyase-like SGNH hydrolase 11
PLP-dependent transferases NAD(P)-binding Rossmann-fold domains 11
DNA primase core DNA primase DnaG, C-terminal domain 11
Succinyl-CoA synthetase domains Acyl-CoA N-acyltransferases (Nat) 11
Cytidine deaminase-like Dihydrofolate reductase-like 11
"Winged helix" DNA-binding domain Acyl-CoA N-acyltransferases (Nat) 11
RuBisCO, large subunit, small (N-terminal) domain RuBisCo, C-terminal domain 11
Cupredoxins Cupredoxins 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleic acid-binding proteins 11
EAL domain-like CBS-domain pair 11
Formate/glycerate dehydrogenase catalytic domain-like ACT-like 11
FGAM synthase PurL, linker domain PurM N-terminal domain-like 11
PUA domain-like alpha/beta knot 11
Voltage-gated potassium channels NAD(P)-binding Rossmann-fold domains 11
AF1531-like Nucleic acid-binding proteins 11
Actin-like ATPase domain HD-domain/PDEase-like 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
Prokaryotic type KH domain (KH-domain type II) Prokaryotic type KH domain (KH-domain type II) 11
Aldolase AFP III-like domain 11
P-loop containing nucleoside triphosphate hydrolases HprK N-terminal domain-like 11
C-terminal UvrC-binding domain of UvrB RuvA domain 2-like 11
PEP carboxykinase N-terminal domain PEP carboxykinase-like 11
(Trans)glycosidases Class I glutamine amidotransferase-like 11
PRC-barrel domain PRC-barrel domain 11
Globin-like Riboflavin synthase domain-like 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
"Winged helix" DNA-binding domain LexA/Signal peptidase 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
Periplasmic binding protein-like II Periplasmic binding protein-like II 11
FAD/NAD(P)-binding domain 4Fe-4S ferredoxins 11
Putative DNA-binding domain Translation proteins 11
GIY-YIG endonuclease RuvA domain 2-like 11
Xylose isomerase-like Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 11
Ribonuclease PH domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 11
cAMP-binding domain-like SGNH hydrolase 11
CheY-like CheC-like 11
Periplasmic binding protein-like II Nucleotide cyclase 11
CO dehydrogenase ISP C-domain like CO dehydrogenase flavoprotein C-terminal domain-like 11
Cysteine proteinases PreATP-grasp domain 11
Tricorn protease domain 2 MetI-like 11
cAMP-binding domain-like cAMP-binding domain-like 11
Zn-dependent exopeptidases LysM domain 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
Homocysteine S-methyltransferase Cobalamin (vitamin B12)-binding domain 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase HSP90 C-terminal domain 11
RuvA domain 2-like RuvA domain 2-like 11
Succinyl-CoA synthetase domains Succinyl-CoA synthetase domains 11
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 11
Adenine nucleotide alpha hydrolases-like PheT/TilS domain 11
L9 N-domain-like Ribosomal protein L9 C-domain 11
PPK N-terminal domain-like PHP14-like 11
Nucleic acid-binding proteins Rad51 N-terminal domain-like 11
PK beta-barrel domain-like PK C-terminal domain-like 11
Nucleotidyltransferase Nucleotidyltransferase 11
Nucleic acid-binding proteins GAD domain-like 11
GAF domain-like Histidine-containing phosphotransfer domain, HPT domain 11
PUA domain-like S-adenosyl-L-methionine-dependent methyltransferases 11
GroEL equatorial domain-like GroEL apical domain-like 11
DNA clamp DNA clamp 11
P-loop containing nucleoside triphosphate hydrolases HCP-like 11
RmlC-like cupins RmlC-like cupins 11
MalF N-terminal region-like MetI-like 11
Prokaryotic type I DNA topoisomerase Zinc beta-ribbon 11
PIN domain-like DNA/RNA polymerases 11
CO dehydrogenase ISP C-domain like FAD-binding/transporter-associated domain-like 11
Tryptophan synthase beta subunit-like PLP-dependent enzymes ACT-like 11
Lysozyme-like LysM domain 11
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 11
HesB-like domain Fe-S cluster assembly (FSCA) domain-like 11
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 11
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 11
Galactose mutarotase-like Glycosyl hydrolase domain 11
Nucleic acid-binding proteins BRCT domain 11
PheT/TilS domain Class II aaRS and biotin synthetases 11
Heme-dependent peroxidases Heme-dependent peroxidases 11
P-loop containing nucleoside triphosphate hydrolases C-terminal UvrC-binding domain of UvrB 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
Sporulation response regulatory protein Spo0B ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
PHP domain-like Nucleic acid-binding proteins 11
Zinc beta-ribbon DNA primase DnaG, C-terminal domain 11
RNase III domain-like dsRNA-binding domain-like 11
Histidine-containing phosphotransfer domain, HPT domain HD-domain/PDEase-like 11
Zinc beta-ribbon Prokaryotic SH3-related domain 11
LysM domain LysM domain 11
HprK N-terminal domain-like Isocitrate/Isopropylmalate dehydrogenase-like 11
HCP-like HCP-like 11
Nqo1 middle domain-like Nqo1C-terminal domain-like 11
Elongation factor Ts (EF-Ts), dimerisation domain Elongation factor Ts (EF-Ts), dimerisation domain 11
Acyl-CoA N-acyltransferases (Nat) Carbon-nitrogen hydrolase 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
FKBP-like FKBP-like 11
TGS-like ThrRS/AlaRS common domain 11
LEA14-like LEA14-like 11
GAF domain-like Homodimeric domain of signal transducing histidine kinase 11
CalX-like CalX-like 11
Pectin lyase-like Pectin lyase-like 11
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 11
Dimeric alpha+beta barrel Dimeric alpha+beta barrel 11
Cysteine proteinases Glutathione synthetase ATP-binding domain-like 11
CalX-like beta-Roll 11
E set domains E set domains 11
THUMP domain-like Adenine nucleotide alpha hydrolases-like 11
Nucleic acid-binding proteins Putative DNA-binding domain 11
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 11
Nucleotide-binding domain FAD/NAD(P)-binding domain 11
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 11

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