SUPERFAMILY 1.75 HMM library and genome assignments server

Domain combination pairs in Burkholderia ambifaria AMMD

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

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Adjacent domain pairs graph

Graph of adjacent domain pairs.


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Domain combination pairs

862 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
"Winged helix" DNA-binding domain Periplasmic binding protein-like II 1961
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 4821
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 4116
Homeodomain-like Homeodomain-like 419
Homeodomain-like Tetracyclin repressor-like, C-terminal domain 372
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 346
GroES-like NAD(P)-binding Rossmann-fold domains 303
"Winged helix" DNA-binding domain Dimeric alpha+beta barrel 261
CheY-like C-terminal effector domain of the bipartite response regulators 253
Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase C-terminal domain-like 225
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 224
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 213
Thiolase-like Thiolase-like 206
Thioredoxin-like GST C-terminal domain-like 201
"Winged helix" DNA-binding domain PLP-dependent transferases 191
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 199
Actin-like ATPase domain Actin-like ATPase domain 195
"Winged helix" DNA-binding domain GntR ligand-binding domain-like 191
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 198
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 184
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 185
"Winged helix" DNA-binding domain GAF domain-like 162
P-loop containing nucleoside triphosphate hydrolases MOP-like 161
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 151
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheY-like 1511
Cytochrome c Cytochrome c 156
Metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 157
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 1511
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 147
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 146
Class I glutamine amidotransferase-like Homeodomain-like 132
Enolase N-terminal domain-like Enolase C-terminal domain-like 131
ISP domain Bet v1-like 132
Homodimeric domain of signal transducing histidine kinase CheY-like 128
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 124
RmlC-like cupins Homeodomain-like 123
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 125
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 128
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 114
CoA-dependent acyltransferases CoA-dependent acyltransferases 118
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB transmembrane domain 116
Thiolase-like ACP-like 1110
P-loop containing nucleoside triphosphate hydrolases CheY-like 115
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB transmembrane domain 116
lambda repressor-like DNA-binding domains Periplasmic binding protein-like I 111
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 116
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 116
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 102
2Fe-2S ferredoxin-like CO dehydrogenase ISP C-domain like 104
Ferredoxin reductase-like, C-terminal NADP-linked domain 2Fe-2S ferredoxin-like 103
Acetyl-CoA synthetase-like ACP-like 1010
NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains 1010
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 105
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 103
Riboflavin synthase domain-like 2Fe-2S ferredoxin-like 103
CheY-like Homeodomain-like 104
NAD(P)-binding Rossmann-fold domains ACP-like 1010
ACP-like ACP-like 99
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 95
cAMP-binding domain-like "Winged helix" DNA-binding domain 92
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 91
P-loop containing nucleoside triphosphate hydrolases Translation proteins 95
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 94
Homeodomain-like SIS domain 82
Phage tail proteins gp5 N-terminal domain-like 85
Thiolase-like NAD(P)-binding Rossmann-fold domains 88
Phage tail proteins Phage tail proteins 85
PYP-like sensor domain (PAS domain) CheY-like 85
"Winged helix" DNA-binding domain Chorismate lyase-like 81
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 84
lambda repressor-like DNA-binding domains RmlC-like cupins 81
Formate dehydrogenase/DMSO reductase, domains 1-3 ADC-like 84
Regulatory protein AraC Homeodomain-like 82
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 75
HlyD-like secretion proteins HlyD-like secretion proteins 73
CoA-dependent acyltransferases ACP-like 77
PYP-like sensor domain (PAS domain) Nucleotide cyclase 76
CoA-dependent acyltransferases Acetyl-CoA synthetase-like 77
Lysozyme-like beta-lactamase/transpeptidase-like 75
EAL domain-like Nucleotide cyclase 76
TPR-like TPR-like 65
FabD/lysophospholipase-like ACP-like 65
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 63
Thiolase-like FabD/lysophospholipase-like 65
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 65
Histidine-containing phosphotransfer domain, HPT domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 66
Phospholipase D/nuclease Phospholipase D/nuclease 65
PreATP-grasp domain Rudiment single hybrid motif 63
Adhesin YadA, collagen-binding domain Adhesin YadA, collagen-binding domain 66
(Trans)glycosidases Glycosyl hydrolase domain 65
Adhesin YadA, collagen-binding domain Pili subunits 66
Pheromone-binding domain of LuxR-like quorum-sensing transcription factors C-terminal effector domain of the bipartite response regulators 62
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 63
CO dehydrogenase molybdoprotein N-domain-like Molybdenum cofactor-binding domain 64
PYP-like sensor domain (PAS domain) EAL domain-like 54
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein S5 domain 2-like 54
gp5 N-terminal domain-like Phage fibre proteins 53
Thiolase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 54
Triger factor/SurA peptide-binding domain-like FKBP-like 54
Sm-like ribonucleoproteins Mechanosensitive channel protein MscS (YggB), C-terminal domain 52
PLP-binding barrel Alanine racemase C-terminal domain-like 51
Phage tail proteins Phage fibre proteins 53
TPR-like UDP-Glycosyltransferase/glycogen phosphorylase 53
Alpha-L RNA-binding motif Pseudouridine synthase 53
Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), C-terminal domain 52
ParB/Sulfiredoxin KorB DNA-binding domain-like 52
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 53
TrpR-like TrpR-like 51
Molybdenum cofactor-binding domain Molybdenum cofactor-binding domain 52
Aspartate/glutamate racemase Aspartate/glutamate racemase 52
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 52
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 52
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 54
Probable ACP-binding domain of malonyl-CoA ACP transacylase ACP-like 54
E set domains (Trans)glycosidases 55
EF-G C-terminal domain-like EF-G C-terminal domain-like 42
Protease propeptides/inhibitors Subtilisin-like 43
Single hybrid motif CoA-dependent acyltransferases 43
6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 43
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 44
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 42
FabD/lysophospholipase-like NAD(P)-binding Rossmann-fold domains 44
Histidine-containing phosphotransfer domain, HPT domain Homodimeric domain of signal transducing histidine kinase 44
Histidine-containing phosphotransfer domain, HPT domain CheY-like 44
(Trans)glycosidases Beta-D-glucan exohydrolase, C-terminal domain 42
HAMP domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 43
Class II aaRS and biotin synthetases Class II aaRS ABD-related 43
PYP-like sensor domain (PAS domain) PYP-like sensor domain (PAS domain) 43
PapD-like Periplasmic chaperone C-domain 42
ACT-like ACT-like 43
Nucleotide-diphospho-sugar transferases RmlC-like cupins 42
PurM N-terminal domain-like PurM C-terminal domain-like 42
Single hybrid motif Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 43
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex CoA-dependent acyltransferases 43
Calcium ATPase, transduction domain A HAD-like 44
PYP-like sensor domain (PAS domain) C-terminal effector domain of the bipartite response regulators 43
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 42
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 42
Trypsin-like serine proteases PDZ domain-like 42
HAD-like Calcium ATPase, transmembrane domain M 44
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 42
Translation proteins EF-G C-terminal domain-like 42
Aspartate receptor, ligand-binding domain Methyl-accepting chemotaxis protein (MCP) signaling domain 42
ACP-like alpha/beta-Hydrolases 43
PYP-like sensor domain (PAS domain) Homeodomain-like 43
GAF domain-like P-loop containing nucleoside triphosphate hydrolases 43
Thiamin diphosphate-binding fold (THDP-binding) Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 43
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 43
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 42
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 41
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 44
MetI-like MetI-like 41
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 41
Cupredoxins Cytochrome c 32
Nucleic acid-binding proteins Nucleic acid-binding proteins 33
P-loop containing nucleoside triphosphate hydrolases C-terminal effector domain of the bipartite response regulators 32
GAF domain-like Homeodomain-like 32
Adenine nucleotide alpha hydrolases-like DHS-like NAD/FAD-binding domain 32
GAF domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 33
Sensory domain-like Methyl-accepting chemotaxis protein (MCP) signaling domain 32
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 32
EAL domain-like Sensory domain-like 31
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 32
PYP-like sensor domain (PAS domain) P-loop containing nucleoside triphosphate hydrolases 32
"Winged helix" DNA-binding domain NagB/RpiA/CoA transferase-like 31
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 33
6-phosphogluconate dehydrogenase C-terminal domain-like ClpP/crotonase 32
EF-G C-terminal domain-like Ribosomal protein S5 domain 2-like 32
Aminoacid dehydrogenase-like, N-terminal domain Isocitrate/Isopropylmalate dehydrogenase-like 31
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 32
CheY-like Methylesterase CheB, C-terminal domain 31
Acetyl-CoA synthetase-like Acetyl-CoA synthetase-like 33
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 32
Pectin lyase-like Autotransporter 33
Penicillin binding protein dimerisation domain beta-lactamase/transpeptidase-like 32
GroEL-intermediate domain like GroEL apical domain-like 31
HAMP domain-like Homodimeric domain of signal transducing histidine kinase 32
Nitrite and sulphite reductase 4Fe-4S domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 31
Thiolase-like S-adenosyl-L-methionine-dependent methyltransferases 33
Molybdenum cofactor biosynthesis proteins MoeA C-terminal domain-like 31
MurCD N-terminal domain MurD-like peptide ligases, catalytic domain 31
Nucleic acid-binding proteins RuvA domain 2-like 33
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 31
FAD-binding/transporter-associated domain-like CO dehydrogenase flavoprotein C-terminal domain-like 32
MoeA N-terminal region -like MoeA C-terminal domain-like 31
S-adenosyl-L-methionine-dependent methyltransferases NAD(P)-binding Rossmann-fold domains 33
Methylated DNA-protein cysteine methyltransferase domain Methylated DNA-protein cysteine methyltransferase, C-terminal domain 32
NAD(P)-binding Rossmann-fold domains ClpP/crotonase 32
GAF domain-like Homodimeric domain of signal transducing histidine kinase 33
Formyltransferase FMT C-terminal domain-like 31
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 33
S-adenosyl-L-methionine-dependent methyltransferases ACP-like 33
GroEL equatorial domain-like GroEL apical domain-like 31
MurCD N-terminal domain MurD-like peptide ligases, peptide-binding domain 31
Adenine nucleotide alpha hydrolases-like Adenine nucleotide alpha hydrolases-like 31
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 33
Protein kinase-like (PK-like) P-loop containing nucleoside triphosphate hydrolases 33
Nitrite/Sulfite reductase N-terminal domain-like Nitrite/Sulfite reductase N-terminal domain-like 31
Nucleotidyltransferase HD-domain/PDEase-like 33
NAD(P)-binding Rossmann-fold domains Isocitrate/Isopropylmalate dehydrogenase-like 31
NAD(P)-binding Rossmann-fold domains Probable ACP-binding domain of malonyl-CoA ACP transacylase 33
PDZ domain-like PDZ domain-like 31
MoeA N-terminal region -like Molybdenum cofactor biosynthesis proteins 31
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 33
LeuD/IlvD-like Aconitase iron-sulfur domain 32
CBS-domain pair FAD-binding/transporter-associated domain-like 31
GroEL equatorial domain-like GroEL-intermediate domain like 31
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 31
MetI-like P-loop containing nucleoside triphosphate hydrolases 22
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 22
Acetyl-CoA synthetase-like Thioesterase/thiol ester dehydrase-isomerase 21
CoA-transferase family III (CaiB/BaiF) CoA-transferase family III (CaiB/BaiF) 21
Nucleic acid-binding proteins Translation proteins SH3-like domain 22
Nucleotidyltransferase Poly A polymerase C-terminal region-like 21
Terpenoid cyclases/Protein prenyltransferases Terpenoid cyclases/Protein prenyltransferases 22
Acetyl-CoA synthetase-like alpha/beta-Hydrolases 22
lambda integrase-like, N-terminal domain DNA breaking-rejoining enzymes 21
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 22
PreATP-grasp domain Single hybrid motif 22
Nqo1 FMN-binding domain-like Nqo1 middle domain-like 22
Thiolase-like alpha/beta-Hydrolases 21
Aldolase post-HMGL domain-like 22
Glutathione synthetase ATP-binding domain-like Single hybrid motif 22
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 21
4Fe-4S ferredoxins Formate dehydrogenase/DMSO reductase, domains 1-3 22
ThrRS/AlaRS common domain Class II aaRS and biotin synthetases 22
Clc chloride channel CBS-domain pair 21
Class I glutamine amidotransferase-like Glycosyl hydrolase domain 21
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphohistidine domain 22
Single hybrid motif FAD/NAD(P)-binding domain 21
YrdC/RibB RibA-like 21
Heme-dependent peroxidases Heme-dependent peroxidases 21
Nucleotidyltransferase Nucleotidyltransferase substrate binding subunit/domain 22
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 22
PYP-like sensor domain (PAS domain) Histidine-containing phosphotransfer domain, HPT domain 22
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 22
tRNA-binding arm Class II aaRS and biotin synthetases 21
HD-domain/PDEase-like ACT-like 22
CheY-like CheY-like 22
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 21
Sensory domain-like Homodimeric domain of signal transducing histidine kinase 21
PYP-like sensor domain (PAS domain) Methyl-accepting chemotaxis protein (MCP) signaling domain 21
alpha-helical ferredoxin Nucleotide-binding domain 22
Leukotriene A4 hydrolase N-terminal domain Metalloproteases ("zincins"), catalytic domain 21
FAD-linked reductases, C-terminal domain 4Fe-4S ferredoxins 21
NAD(P)-binding Rossmann-fold domains UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 21
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 22
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 22
CoA-dependent acyltransferases alpha/beta-Hydrolases 22
MFS general substrate transporter MFS general substrate transporter 21
Acetyl-CoA synthetase-like Thiolase-like 22
EspE N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 22
PLP-dependent transferases Ornithine decarboxylase C-terminal domain 21
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 21
GreA transcript cleavage protein, N-terminal domain FKBP-like 21
P-loop containing nucleoside triphosphate hydrolases ACT-like 21
UDP-Glycosyltransferase/glycogen phosphorylase UDP-Glycosyltransferase/glycogen phosphorylase 22
P-loop containing nucleoside triphosphate hydrolases CBS-domain pair 21
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 21
FMN-linked oxidoreductases FAD/NAD(P)-binding domain 22
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 22
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 22
alpha/beta-Hydrolases alpha/beta-Hydrolases 21
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 22
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 22
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 21
Rhodanese/Cell cycle control phosphatase Rhodanese/Cell cycle control phosphatase 22
ACT-like Formyltransferase 21
Putative DNA-binding domain P-loop containing nucleoside triphosphate hydrolases 22
Nucleotidyltransferase TGS-like 22
Cupredoxins Cupredoxins 22
FAD/NAD(P)-binding domain 4Fe-4S ferredoxins 21
Nqo1 FMN-binding domain-like Nqo1C-terminal domain-like 22
MOP-like MOP-like 22
P-loop containing nucleoside triphosphate hydrolases ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 22
TK C-terminal domain-like Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 21
Folate-binding domain Aminomethyltransferase beta-barrel domain 22
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 22
(Trans)glycosidases Class I glutamine amidotransferase-like 21
Homeodomain-like Ribonuclease H-like 21
EAL domain-like CBS-domain pair 22
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 22
Translation proteins ThrRS/AlaRS common domain 22
NagB/RpiA/CoA transferase-like NagB/RpiA/CoA transferase-like 22
Single hybrid motif FAD/NAD-linked reductases, dimerisation (C-terminal) domain 21
2Fe-2S ferredoxin-like Formate dehydrogenase/DMSO reductase, domains 1-3 22
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 21
Histidine-containing phosphotransfer domain, HPT domain CheW-like 22
Rudiment single hybrid motif Single hybrid motif 22
Sensory domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 21
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 22
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
HMA, heavy metal-associated domain HAD-like 22
2Fe-2S ferredoxin-like 4Fe-4S ferredoxins 22
Nucleotide cyclase P-loop containing nucleoside triphosphate hydrolases 22
Pectin lyase-like Pectin lyase-like 22
Probable ACP-binding domain of malonyl-CoA ACP transacylase alpha/beta-Hydrolases 21
Acetyl-CoA synthetase-like NAD(P)-binding Rossmann-fold domains 22
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheW-like 22
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 22
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 21
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 22
Cytochrome c oxidase subunit II-like, transmembrane region Cupredoxins 22
HAMP domain-like PYP-like sensor domain (PAS domain) 22
Galactose-binding domain-like Galactose-binding domain-like 21
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 21
FabD/lysophospholipase-like alpha/beta-Hydrolases 21
Nucleotidyltransferase ACT-like 22
FAD-binding/transporter-associated domain-like alpha-helical ferredoxin 22
Ribonuclease H-like DNA/RNA polymerases 22
P-loop containing nucleoside triphosphate hydrolases Hypothetical protein YjiA, C-terminal domain 21
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 21
E set domains Glycosyl hydrolase domain 22
CheY-like Nucleotide cyclase 22
CBS-domain pair Nucleotide cyclase 22
6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 21
Riboflavin synthase domain-like Riboflavin synthase domain-like 21
Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 22
Nqo1 middle domain-like Nqo1C-terminal domain-like 22
L30e-like alpha/beta knot 21
FAD-linked oxidases, C-terminal domain alpha-helical ferredoxin 22
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphoenolpyruvate/pyruvate domain 22
Voltage-gated potassium channels NAD(P)-binding Rossmann-fold domains 22
DnaK suppressor protein DksA, alpha-hairpin domain Glucocorticoid receptor-like (DNA-binding domain) 21
Translation proteins Ribosomal protein S5 domain 2-like 21
NAD(P)-binding Rossmann-fold domains Acyl-CoA N-acyltransferases (Nat) 22
HD-domain/PDEase-like TGS-like 22
MalF N-terminal region-like MetI-like 21
P-loop containing nucleoside triphosphate hydrolases Restriction endonuclease-like 22
Pili subunits GspK insert domain-like 11
Diaminopimelate epimerase-like Diaminopimelate epimerase-like 11
FabD/lysophospholipase-like CoA-dependent acyltransferases 11
Flavoproteins Riboflavin synthase domain-like 11
Protease propeptides/inhibitors alpha-D-mannose-specific plant lectins 11
Nucleotidyltransferase substrate binding subunit/domain HD-domain/PDEase-like 11
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
PurM C-terminal domain-like Class I glutamine amidotransferase-like 11
Rhomboid-like YVTN repeat-like/Quinoprotein amine dehydrogenase 11
Purple acid phosphatase, N-terminal domain Metallo-dependent phosphatases 11
Acyl-CoA N-acyltransferases (Nat) Thiolase-like 11
N-terminal domain of DnaB helicase P-loop containing nucleoside triphosphate hydrolases 11
Translation proteins PRC-barrel domain 11
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 11
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 11
S13-like H2TH domain Glucocorticoid receptor-like (DNA-binding domain) 11
Elongation factor Ts (EF-Ts), dimerisation domain Elongation factor Ts (EF-Ts), dimerisation domain 11
Phosphoenolpyruvate/pyruvate domain Nucleotide-diphospho-sugar transferases 11
DNA ligase/mRNA capping enzyme, catalytic domain RuvA domain 2-like 11
Nucleotidyltransferase PAP/OAS1 substrate-binding domain 11
DNA clamp DNA clamp 11
Thioredoxin-like TPR-like 11
TGS-like Class II aaRS ABD-related 11
P-loop containing nucleoside triphosphate hydrolases TPR-like 11
Fe-S cluster assembly (FSCA) domain-like P-loop containing nucleoside triphosphate hydrolases 11
5' to 3' exonuclease, C-terminal subdomain Ribonuclease H-like 11
DNA polymerase beta, N-terminal domain-like PHP domain-like 11
Chorismate mutase II ACT-like 11
FMN-binding split barrel UbiD C-terminal domain-like 11
FAD-linked oxidoreductase ALDH-like 11
Peptidase/esterase 'gauge' domain alpha/beta-Hydrolases 11
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 11
GAF domain-like PYP-like sensor domain (PAS domain) 11
Putative DNA-binding domain Translation proteins 11
FabD/lysophospholipase-like Acetyl-CoA synthetase-like 11
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 11
Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha) Thioredoxin-like 11
PurS-like Class I glutamine amidotransferase-like 11
CheY-binding domain of CheA Homodimeric domain of signal transducing histidine kinase 11
Probable ACP-binding domain of malonyl-CoA ACP transacylase PLP-dependent transferases 11
Acyl-CoA N-acyltransferases (Nat) Acyl-CoA N-acyltransferases (Nat) 11
Macro domain-like Zn-dependent exopeptidases 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain ACT-like 11
CO dehydrogenase ISP C-domain like CO dehydrogenase molybdoprotein N-domain-like 11
Periplasmic binding protein-like II ACT-like 11
Methionine synthase domain Methionine synthase activation domain-like 11
Protein kinase-like (PK-like) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 11
ISP domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 11
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 11
Putative DNA-binding domain Anticodon-binding domain of PheRS 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
PIN domain-like DNA/RNA polymerases 11
Tropomyosin P-loop containing nucleoside triphosphate hydrolases 11
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 11
Cryptochrome/photolyase, N-terminal domain Cryptochrome/photolyase FAD-binding domain 11
Metal cation-transporting ATPase, ATP-binding domain N Calcium ATPase, transmembrane domain M 11
PDZ domain-like ClpP/crotonase 11
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Adenine nucleotide alpha hydrolases-like 11
Rudiment single hybrid motif post-HMGL domain-like 11
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 11
Tetrapyrrole methylase S-adenosyl-L-methionine-dependent methyltransferases 11
lambda repressor-like DNA-binding domains Cyanase C-terminal domain 11
ADC synthase D-aminoacid aminotransferase-like PLP-dependent enzymes 11
alpha/beta-Hydrolases S-adenosyl-L-methionine-dependent methyltransferases 11
NAD(P)-binding Rossmann-fold domains CoA-dependent acyltransferases 11
Cytochrome c OmpA-like 11
Periplasmic binding protein-like II Homodimeric domain of signal transducing histidine kinase 11
Formate dehydrogenase/DMSO reductase, domains 1-3 Ferredoxin reductase-like, C-terminal NADP-linked domain 11
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 11
Rad51 N-terminal domain-like Rad51 N-terminal domain-like 11
Epsilon subunit of F1F0-ATP synthase N-terminal domain Epsilon subunit of F1F0-ATP synthase C-terminal domain 11
RmlC-like cupins RmlC-like cupins 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
FAD/NAD(P)-binding domain Nitrite/Sulfite reductase N-terminal domain-like 11
Galactose mutarotase-like Glycosyl hydrolase domain 11
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 11
Oligoxyloglucan reducing end-specific cellobiohydrolase Oligoxyloglucan reducing end-specific cellobiohydrolase 11
Metallo-hydrolase/oxidoreductase SCP-like 11
E set domains Chitinase insertion domain 11
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
Nucleotidylyl transferase Nucleic acid-binding proteins 11
S-adenosyl-L-methionine-dependent methyltransferases TPR-like 11
Glutamyl tRNA-reductase catalytic, N-terminal domain NAD(P)-binding Rossmann-fold domains 11
HPr-like Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 11
Acyl-CoA dehydrogenase C-terminal domain-like ACP-like 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 11
"Winged helix" DNA-binding domain LexA/Signal peptidase 11
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 11
MFS general substrate transporter Glycerol-3-phosphate (1)-acyltransferase 11
ABC transporter transmembrane region ABC transporter transmembrane region 11
Urease metallochaperone UreE, N-terminal domain Urease metallochaperone UreE, C-terminal domain 11
L9 N-domain-like Ribosomal protein L9 C-domain 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 11
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 11
Nucleotidylyl transferase Riboflavin kinase-like 11
RuvA domain 2-like BRCT domain 11
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
Aconitase B, N-terminal domain LeuD/IlvD-like 11
Succinyl-CoA synthetase domains Succinyl-CoA synthetase domains 11
Single hybrid motif Single hybrid motif 11
Adenine nucleotide alpha hydrolases-like GAF domain-like 11
P-loop containing nucleoside triphosphate hydrolases Smc hinge domain 11
Prokaryotic type KH domain (KH-domain type II) Rad51 N-terminal domain-like 11
WD40 repeat-like Galactose oxidase, central domain 11
FMN-linked oxidoreductases Nucleotide-binding domain 11
Pseudouridine synthase PUA domain-like 11
YajQ-like YajQ-like 11
Class I glutamine amidotransferase-like LD-carboxypeptidase A C-terminal domain-like 11
DNA polymerase beta, N-terminal domain-like RuvA domain 2-like 11
YhbC-like, N-terminal domain YhbC-like, C-terminal domain 11
FAD/NAD(P)-binding domain Aminomethyltransferase beta-barrel domain 11
DNA polymerase beta, N-terminal domain-like Sec63 N-terminal domain-like 11
RuvA domain 2-like RuvA domain 2-like 11
Carbamate kinase-like PUA domain-like 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 11
FabD/lysophospholipase-like FabD/lysophospholipase-like 11
Resolvase-like Homeodomain-like 11
Dihydropteroate synthetase-like Methionine synthase domain 11
2Fe-2S ferredoxin-like ADC-like 11
Glutathione synthetase ATP-binding domain-like post-HMGL domain-like 11
2Fe-2S ferredoxin-like Molybdenum cofactor-binding domain 11
Protein kinase-like (PK-like) Homodimeric domain of signal transducing histidine kinase 11
Bacterial muramidases Lysozyme-like 11
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 11
CheY-binding domain of CheA CheW-like 11
Ricin B-like lectins Metalloproteases ("zincins"), catalytic domain 11
ClpP/crotonase NfeD domain-like 11
FAD/NAD(P)-binding domain Folate-binding domain 11
Tex N-terminal region-like Nucleic acid-binding proteins 11
Flavoproteins Ferredoxin reductase-like, C-terminal NADP-linked domain 11
KorB DNA-binding domain-like C-terminal domain of transcriptional repressors 11
P-loop containing nucleoside triphosphate hydrolases TGS-like 11
YjeF N-terminal domain-like Ribokinase-like 11
Sec63 N-terminal domain-like Nucleotidyltransferase 11
Subtilisin-like alpha-D-mannose-specific plant lectins 11
Transcription factor NusA, N-terminal domain Rad51 N-terminal domain-like 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
Carbon-nitrogen hydrolase Adenine nucleotide alpha hydrolases-like 11
Nucleotidyltransferase PHP domain-like 11
Oligoxyloglucan reducing end-specific cellobiohydrolase Sialidases 11
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 11
Nucleic acid-binding proteins DNA helicase RuvA subunit, C-terminal domain 11
ADC-like Riboflavin synthase domain-like 11
Homodimeric domain of signal transducing histidine kinase CheW-like 11
PLP-dependent transferases Acetyl-CoA synthetase-like 11
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 11
CBS-domain pair PYP-like sensor domain (PAS domain) 11
Chaperone J-domain HSC20 (HSCB), C-terminal oligomerisation domain 11
Carbohydrate-binding domain (Trans)glycosidases 11
GIY-YIG endonuclease C-terminal UvrC-binding domain of UvrB 11
Nucleotidyltransferase substrate binding subunit/domain Nucleotidyltransferase substrate binding subunit/domain 11
Carbamate kinase-like Acyl-CoA N-acyltransferases (Nat) 11
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 11
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 11
Voltage-gated potassium channels E set domains 11
HCP-like UDP-Glycosyltransferase/glycogen phosphorylase 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Alpha subunit of glutamate synthase, C-terminal domain 11
NAD(P)-binding Rossmann-fold domains PLP-dependent transferases 11
CO dehydrogenase ISP C-domain like Molybdenum cofactor-binding domain 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
Adenine nucleotide alpha hydrolases-like MesJ substrate recognition domain-like 11
ADC-like Flavoproteins 11
PKD domain PKD domain 11
Arabinanase/levansucrase/invertase Concanavalin A-like lectins/glucanases 11
Nucleotidyltransferase substrate binding subunit/domain ACT-like 11
Ribonuclease H-like RuvA domain 2-like 11
Class II aaRS and biotin synthetases Translation proteins 11
CO dehydrogenase ISP C-domain like FAD-binding/transporter-associated domain-like 11
Sialidases beta-Roll 11
Carbamate kinase-like ACT-like 11
NAD(P)-binding Rossmann-fold domains ACT-like 11
Glycosyl hydrolase domain Protein kinase-like (PK-like) 11
Dihydropteroate synthetase-like Cobalamin (vitamin B12)-binding domain 11
(Trans)glycosidases (Trans)glycosidases 11
alpha/beta-Hydrolases Galactose-binding domain-like 11
Metalloproteases ("zincins"), catalytic domain PDZ domain-like 11
post-HMGL domain-like Single hybrid motif 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
Nucleic acid-binding proteins BRCT domain 11
Actin-like ATPase domain HD-domain/PDEase-like 11
Sialidases Sialidases 11
Surface presentation of antigens (SPOA) Surface presentation of antigens (SPOA) 11
PIN domain-like Ribonuclease H-like 11
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
Homo-oligomeric flavin-containing Cys decarboxylases, HFCD CoaB-like 11
Chorismate mutase II Periplasmic binding protein-like II 11
Ribosomal protein L6 Ribosomal protein L6 11
FAD/NAD(P)-binding domain alpha/beta-Hydrolases 11
Nucleic acid-binding proteins Anticodon-binding domain of PheRS 11
CheY-binding domain of CheA ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 11
beta-Galactosidase/glucuronidase domain (Trans)glycosidases 11
Acetyl-CoA synthetase-like Acyl-CoA dehydrogenase C-terminal domain-like 11
HPr-like Phosphoenolpyruvate/pyruvate domain 11
Transcription factor NusA, N-terminal domain Nucleic acid-binding proteins 11
Cytochrome c oxidase subunit II-like, transmembrane region OmpA-like 11
ClpP/crotonase ClpP/crotonase 11
Cytochrome c oxidase subunit I-like Cytochrome c oxidase subunit III-like 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 11
PreATP-grasp domain PreATP-grasp domain 11
PK beta-barrel domain-like PK C-terminal domain-like 11
Ribbon-helix-helix ALDH-like 11
Nucleic acid-binding proteins S-adenosyl-L-methionine-dependent methyltransferases 11
PrpR receptor domain-like PYP-like sensor domain (PAS domain) 11
Duplicated hybrid motif HPr-like 11
Glutathione synthetase ATP-binding domain-like Succinyl-CoA synthetase domains 11
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 11
Succinyl-CoA synthetase domains Acyl-CoA N-acyltransferases (Nat) 11
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 11
PHP14-like Phospholipase D/nuclease 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) Homeodomain-like 11
Probable ACP-binding domain of malonyl-CoA ACP transacylase CoA-dependent acyltransferases 11
P-loop containing nucleoside triphosphate hydrolases HRDC-like 11
Dihydropteroate synthetase-like Methionine synthase activation domain-like 11
DsbC/DsbG N-terminal domain-like Thioredoxin-like 11
Protein kinase-like (PK-like) GAF domain-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase HSP90 C-terminal domain 11
Nucleic acid-binding proteins Rad51 N-terminal domain-like 11
TGS-like ACT-like 11
Translation proteins Initiation factor IF2/eIF5b, domain 3 11
(Trans)glycosidases Protein kinase-like (PK-like) 11
Cobalamin (vitamin B12)-binding domain Methionine synthase activation domain-like 11
R1 subunit of ribonucleotide reductase, N-terminal domain PFL-like glycyl radical enzymes 11
Metalloproteases ("zincins"), catalytic domain PKD domain 11
Rho N-terminal domain-like Nucleic acid-binding proteins 11
ISP domain FAD/NAD(P)-binding domain 11
PurS-like PurM N-terminal domain-like 11
Class II aaRS and biotin synthetases GAD domain-like 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
2Fe-2S ferredoxin-like CO dehydrogenase molybdoprotein N-domain-like 11
Chaperone J-domain HSP40/DnaJ peptide-binding domain 11
5' to 3' exonuclease, C-terminal subdomain DNA/RNA polymerases 11
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 11
Acetyl-CoA synthetase-like Acyl-CoA dehydrogenase NM domain-like 11
NagB/RpiA/CoA transferase-like D-ribose-5-phosphate isomerase (RpiA), lid domain 11
Acyl-CoA dehydrogenase C-terminal domain-like Acyl-CoA dehydrogenase C-terminal domain-like 11
HPr-like Phosphohistidine domain 11
Sigma2 domain of RNA polymerase sigma factors NTF2-like 11
2Fe-2S ferredoxin-like CO dehydrogenase flavoprotein C-terminal domain-like 11
PrpR receptor domain-like P-loop containing nucleoside triphosphate hydrolases 11
GAF domain-like EAL domain-like 11
P-loop containing nucleoside triphosphate hydrolases CarD-like 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
Cytidine deaminase-like Dihydrofolate reductase-like 11
TPR-like HCP-like 11
2Fe-2S ferredoxin-like FAD-binding/transporter-associated domain-like 11
Translation proteins Translation proteins 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
Metallo-hydrolase/oxidoreductase Rhodanese/Cell cycle control phosphatase 11
UROD/MetE-like UROD/MetE-like 11
Fumarylacetoacetate hydrolase, FAH, N-terminal domain FAH 11
FMN-linked oxidoreductases 4Fe-4S ferredoxins 11
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 11
Metal cation-transporting ATPase, ATP-binding domain N HAD-like 11
HMA, heavy metal-associated domain HMA, heavy metal-associated domain 11
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 11
Phase 1 flagellin Phase 1 flagellin 11
Methionine synthase domain Cobalamin (vitamin B12)-binding domain 11
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 11
GAF domain-like Nucleotide cyclase 11
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 11
Acyl-CoA N-acyltransferases (Nat) Probable ACP-binding domain of malonyl-CoA ACP transacylase 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) Methylated DNA-protein cysteine methyltransferase domain 11
Duplicated hybrid motif Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 11
Translation proteins "Winged helix" DNA-binding domain 11
Hsp33 domain HSP33 redox switch-like 11
Carbohydrate-binding domain beta-N-acetylhexosaminidase-like domain 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FMN-linked oxidoreductases 11
TolB, N-terminal domain Tricorn protease N-terminal domain 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Nucleic acid-binding proteins 11
P-loop containing nucleoside triphosphate hydrolases Homodimeric domain of signal transducing histidine kinase 11
Aldolase Single hybrid motif 11
Homeodomain-like Methylated DNA-protein cysteine methyltransferase domain 11
Periplasmic binding protein-like I Homeodomain-like 11
PPK N-terminal domain-like Phospholipase D/nuclease 11
PrpR receptor domain-like Homeodomain-like 11
"Winged helix" DNA-binding domain MOP-like 11
PheT/TilS domain Anticodon-binding domain of PheRS 11
PreATP-grasp domain Aldolase 11
P-loop containing nucleoside triphosphate hydrolases C-terminal UvrC-binding domain of UvrB 11
FAD/NAD(P)-binding domain Nitrite and sulphite reductase 4Fe-4S domain-like 11
DPP6 N-terminal domain-like Galactose-binding domain-like 11
HprK N-terminal domain-like PEP carboxykinase-like 11
FMN-binding split barrel Ferredoxin reductase-like, C-terminal NADP-linked domain 11
DAK1/DegV-like DhaL-like 11
Galactose mutarotase-like (Trans)glycosidases 11
(Phosphotyrosine protein) phosphatases II FAD/NAD(P)-binding domain 11
PheT/TilS domain Putative DNA-binding domain 11
PurS-like PurM C-terminal domain-like 11
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
NagB/RpiA/CoA transferase-like alpha-helical ferredoxin 11
Formate dehydrogenase/DMSO reductase, domains 1-3 Riboflavin synthase domain-like 11
PPK N-terminal domain-like PHP14-like 11
Thioredoxin-like Thioredoxin-like 11
(Trans)glycosidases Carbohydrate binding domain 11
Adenine nucleotide alpha hydrolases-like PheT/TilS domain 11
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 11
Tex N-terminal region-like Ribonuclease H-like 11
Zinc beta-ribbon DNA primase core 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
Histidine-containing phosphotransfer domain, HPT domain CheY-binding domain of CheA 11
Ribosomal protein S5 domain 2-like HSP90 C-terminal domain 11
TGS-like Class II aaRS and biotin synthetases 11
Transmembrane di-heme cytochromes a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 11
4'-phosphopantetheinyl transferase 4'-phosphopantetheinyl transferase 11
Ribonuclease H-like Nucleic acid-binding proteins 11
C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase Alkaline phosphatase-like 11
HAMP domain-like Histidine-containing phosphotransfer domain, HPT domain 11
YbaK/ProRS associated domain Class II aaRS ABD-related 11
Xylose isomerase-like Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 11
PUA domain-like Ribosomal protein S5 domain 2-like 11
FGAM synthase PurL, linker domain PurM N-terminal domain-like 11
Bacterial luciferase-like NAD(P)-binding Rossmann-fold domains 11
Glucocorticoid receptor-like (DNA-binding domain) P-loop containing nucleoside triphosphate hydrolases 11
Oligoxyloglucan reducing end-specific cellobiohydrolase beta-Roll 11
(Trans)glycosidases PKD domain 11
Methylglyoxal synthase-like Cytidine deaminase-like 11
L domain-like Protein kinase-like (PK-like) 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
PLP-dependent transferases PLP-dependent transferases 11
3-carboxy-cis,cis-mucoante lactonizing enzyme NHL repeat 11
Homeodomain-like Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
ACP-like PLP-dependent transferases 11
PreATP-grasp domain post-HMGL domain-like 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
HAMP domain-like Nucleotide cyclase 11
RNase III domain-like dsRNA-binding domain-like 11
Glucose permease domain IIB Glucose permease domain IIB 11
CbiG N-terminal domain-like Tetrapyrrole methylase 11
C-terminal UvrC-binding domain of UvrB RuvA domain 2-like 11
Nucleic acid-binding proteins Prokaryotic type KH domain (KH-domain type II) 11
NAD(P)-binding Rossmann-fold domains TrkA C-terminal domain-like 11
E set domains E set domains 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
Sensory domain-like Nucleotide cyclase 11
Bacterial luciferase-like ACP-like 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleic acid-binding proteins 11
Eukaryotic type KH-domain (KH-domain type I) Nucleic acid-binding proteins 11
PUA domain-like S-adenosyl-L-methionine-dependent methyltransferases 11
FAD/NAD(P)-binding domain HI0933 insert domain-like 11
Acyl-CoA dehydrogenase NM domain-like ACP-like 11
ABC transporter transmembrane region ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Heme-dependent catalase-like Class I glutamine amidotransferase-like 11
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 11
"Winged helix" DNA-binding domain Acyl-CoA N-acyltransferases (Nat) 11
MFS general substrate transporter S-adenosyl-L-methionine-dependent methyltransferases 11
Sensory domain-like HAMP domain-like 11
CO dehydrogenase ISP C-domain like CO dehydrogenase flavoprotein C-terminal domain-like 11
alpha/beta-Hydrolases NAD(P)-binding Rossmann-fold domains 11
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 11
FliG FliG 11
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
FAD-binding/transporter-associated domain-like Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain 11
Nucleic acid-binding proteins Putative DNA-binding domain 11
"Winged helix" DNA-binding domain Actin-like ATPase domain 11
PurM N-terminal domain-like Class I glutamine amidotransferase-like 11
Globin-like Ferredoxin reductase-like, C-terminal NADP-linked domain 11
Single hybrid motif alpha/beta-Hydrolases 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
ABC transporter involved in vitamin B12 uptake, BtuC ABC transporter involved in vitamin B12 uptake, BtuC 11
beta-N-acetylhexosaminidase-like domain E set domains 11
Cytochrome c oxidase subunit II-like, transmembrane region Cytochrome c 11
Transcription factor NusA, N-terminal domain Prokaryotic type KH domain (KH-domain type II) 11
RBP11-like subunits of RNA polymerase C-terminal domain of RNA polymerase alpha subunit 11
beta-N-acetylhexosaminidase-like domain (Trans)glycosidases 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
Periplasmic binding protein-like II CheY-like 11
Calcium ATPase, transduction domain A Metal cation-transporting ATPase, ATP-binding domain N 11
PurS-like FGAM synthase PurL, linker domain 11
N-acetylmuramoyl-L-alanine amidase-like PGBD-like 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
Probable ACP-binding domain of malonyl-CoA ACP transacylase Acetyl-CoA synthetase-like 11
Rudiment single hybrid motif Aldolase 11
PreATP-grasp domain Methylglyoxal synthase-like 11
beta-Galactosidase/glucuronidase domain beta-Galactosidase/glucuronidase domain 11
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 11
Chondroitin AC/alginate lyase Concanavalin A-like lectins/glucanases 11
N-terminal domain of bifunctional PutA protein ALDH-like 11
Trigger factor ribosome-binding domain FKBP-like 11
PIN domain-like P-loop containing nucleoside triphosphate hydrolases 11
Adenine nucleotide alpha hydrolases-like Homodimeric domain of signal transducing histidine kinase 11
Thiolase-like PLP-dependent transferases 11
P-loop containing nucleoside triphosphate hydrolases TrpR-like 11
Isochorismatase-like hydrolases ACP-like 11
Chemotaxis receptor methyltransferase CheR, N-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 11
Tropomyosin TPR-like 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleotidylyl transferase 11
(Trans)glycosidases Chitinase insertion domain 11
lambda repressor-like DNA-binding domains CheY-like 11
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 11
Adenine nucleotide alpha hydrolases-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
AhpD-like AhpD-like 11
Sec63 N-terminal domain-like PHP domain-like 11
GAF domain-like GAF domain-like 11
Periplasmic binding protein-like II Cytochrome c 11
Cupredoxins OmpA-like 11
DNA polymerase beta, N-terminal domain-like Nucleotidyltransferase 11
S-adenosyl-L-methionine-dependent methyltransferases FabD/lysophospholipase-like 11
alpha/beta-Hydrolases NTF2-like 11
post-HMGL domain-like 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 11
E set domains Carbohydrate binding domain 11
CheW-like CheY-like 11
Formate dehydrogenase/DMSO reductase, domains 1-3 Flavoproteins 11
CarD-like TRCF domain-like 11
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 11
Class II aaRS and biotin synthetases YbaK/ProRS associated domain 11
ADC-like Ferredoxin reductase-like, C-terminal NADP-linked domain 11
CheC-like Surface presentation of antigens (SPOA) 11
FKBP-like FKBP-like 11
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
DinB/YfiT-like putative metalloenzymes C-type lectin-like 11
N-terminal domain of MutM-like DNA repair proteins Glucocorticoid receptor-like (DNA-binding domain) 11
ARM repeat ARM repeat 11
ABC transporter transmembrane region CheY-like 11
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
Nucleic acid-binding proteins PheT/TilS domain 11
Metallo-dependent phosphatases 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11
PH0987 N-terminal domain-like Cyclophilin-like 11
Ribbon-helix-helix FAD-linked oxidoreductase 11
Chitinase insertion domain PKD domain 11
Aconitase B, N-terminal domain Aconitase iron-sulfur domain 11
Prokaryotic type KH domain (KH-domain type II) Prokaryotic type KH domain (KH-domain type II) 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
Glutamine synthetase/guanido kinase GatB/YqeY motif 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
PheT/TilS domain Class II aaRS and biotin synthetases 11
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 11
Putative DNA-binding domain Initiation factor IF2/eIF5b, domain 3 11
N-terminal domain of bifunctional PutA protein FAD-linked oxidoreductase 11
NagB/RpiA/CoA transferase-like 4Fe-4S ferredoxins 11
Glutathione synthetase ATP-binding domain-like Phosphoenolpyruvate/pyruvate domain 11
Duplicated hybrid motif Phosphoenolpyruvate/pyruvate domain 11
Ribbon-helix-helix N-terminal domain of bifunctional PutA protein 11
Actin-like ATPase domain SIS domain 11
Periplasmic binding protein-like II ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
NAD(P)-binding Rossmann-fold domains Glutamyl tRNA-reductase dimerization domain 11
TATA-box binding protein-like DNA-glycosylase 11
2Fe-2S ferredoxin-like alpha-helical ferredoxin 11
Sigma3 and sigma4 domains of RNA polymerase sigma factors NTF2-like 11
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 11
Tryptophan synthase beta subunit-like PLP-dependent enzymes ACT-like 11
Glutamyl tRNA-reductase catalytic, N-terminal domain Glutamyl tRNA-reductase dimerization domain 11
4Fe-4S ferredoxins ADC-like 11
Nucleotide cyclase TPR-like 11
MOSC N-terminal domain-like PK beta-barrel domain-like 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
E set domains PKD domain 11
DNA-glycosylase Nudix 11
Lysozyme-like LysM domain 11
YegP-like YegP-like 11
alpha-D-mannose-specific plant lectins alpha-D-mannose-specific plant lectins 11
PRC-barrel domain PRC-barrel domain 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
MesJ substrate recognition domain-like PheT/TilS domain 11
FGAM synthase PurL, linker domain PurM C-terminal domain-like 11
beta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like 11
FGAM synthase PurL, linker domain Class I glutamine amidotransferase-like 11
FMN-binding split barrel Riboflavin synthase domain-like 11
Nucleotide-binding domain FAD/NAD(P)-binding domain 11
NTF2-like NTF2-like 11
Nucleotide-diphospho-sugar transferases PilZ domain-like 11
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 11
TGS-like ThrRS/AlaRS common domain 11
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 11
GIY-YIG endonuclease RuvA domain 2-like 11
Carbohydrate binding domain Carbohydrate binding domain 11
Ribonuclease H-like GIY-YIG endonuclease 11
S-adenosyl-L-methionine-dependent methyltransferases Probable ACP-binding domain of malonyl-CoA ACP transacylase 11
Ricin B-like lectins PKD domain 11
Nucleotidyltransferase Nucleotidyltransferase 11
PUA domain-like alpha/beta knot 11
DNA topoisomerase I domain DNA breaking-rejoining enzymes 11
S-adenosyl-L-methionine-dependent methyltransferases Acyl-CoA N-acyltransferases (Nat) 11
Nucleic acid-binding proteins ArfGap/RecO-like zinc finger 11
Tex N-terminal region-like RuvA domain 2-like 11
Zinc beta-ribbon Prokaryotic SH3-related domain 11
SIS domain CBS-domain pair 11
Carbohydrate-binding domain E set domains 11
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 11
Thiolase-like CoA-dependent acyltransferases 11
Protein kinase-like (PK-like) Nucleotide cyclase 11
alpha/beta-Hydrolases OsmC-like 11
Thioredoxin-like FAD/NAD(P)-binding domain 11
PEP carboxykinase N-terminal domain PEP carboxykinase-like 11
TrmE connector domain P-loop containing nucleoside triphosphate hydrolases 11
PLP-dependent transferases CoA-dependent acyltransferases 11
Duplicated hybrid motif Phosphohistidine domain 11
Nucleotidylyl transferase Nudix 11
Acyl-CoA N-acyltransferases (Nat) ACP-like 11
Globin-like Riboflavin synthase domain-like 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
Periplasmic binding protein-like II Histidine-containing phosphotransfer domain, HPT domain 11
Nucleotide-binding domain Nucleotide-binding domain 11
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain "Winged helix" DNA-binding domain 11
Nucleotidylyl transferase Ribosomal protein L25-like 11
FMN-linked oxidoreductases Alpha subunit of glutamate synthase, C-terminal domain 11
CheY-like HD-domain/PDEase-like 11
Class II aaRS and biotin synthetases C-terminal domain of transcriptional repressors 11
Nucleic acid-binding proteins GAD domain-like 11
Glutathione synthetase ATP-binding domain-like Aldolase 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
GroES-like GroES-like 11
Rho N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
FabD/lysophospholipase-like PLP-dependent transferases 11
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 11
RuvA domain 2-like DNA helicase RuvA subunit, C-terminal domain 11
Galactose-binding domain-like beta-Galactosidase/glucuronidase domain 11
CheY-like EAL domain-like 11
Thioesterase/thiol ester dehydrase-isomerase Thioesterase/thiol ester dehydrase-isomerase 11
Acyl-CoA N-acyltransferases (Nat) FabD/lysophospholipase-like 11
Galactose-binding domain-like (Trans)glycosidases 11
FMN-binding split barrel 2Fe-2S ferredoxin-like 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 11
SpoIIaa-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Actin-like ATPase domain Homeodomain-like 11
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 11
ParB/Sulfiredoxin C-terminal domain of transcriptional repressors 11
Nucleotidylyl transferase tRNA-binding arm 11

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