SUPERFAMILY 1.75 HMM library and genome assignments server

Domain combination pairs in Desulfovibrio vulgaris subsp. vulgaris DP4

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

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Adjacent domain pairs graph

Graph of adjacent domain pairs.


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Domain combination pairs

678 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 5436
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 3828
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 3424
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 318
PYP-like sensor domain (PAS domain) PYP-like sensor domain (PAS domain) 3027
CheY-like P-loop containing nucleoside triphosphate hydrolases 256
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheY-like 2422
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 2012
Homodimeric domain of signal transducing histidine kinase CheY-like 1917
CheY-like Homeodomain-like 192
PYP-like sensor domain (PAS domain) CheY-like 1817
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 122
PYP-like sensor domain (PAS domain) Nucleotide cyclase 1212
PYP-like sensor domain (PAS domain) Methyl-accepting chemotaxis protein (MCP) signaling domain 102
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein S5 domain 2-like 106
P-loop containing nucleoside triphosphate hydrolases Translation proteins 96
Nucleotide cyclase EAL domain-like 99
Actin-like ATPase domain Actin-like ATPase domain 93
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 86
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 85
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Histidine-containing phosphotransfer domain, HPT domain 88
PYP-like sensor domain (PAS domain) EAL domain-like 77
Sensory domain-like Methyl-accepting chemotaxis protein (MCP) signaling domain 74
PYP-like sensor domain (PAS domain) P-loop containing nucleoside triphosphate hydrolases 74
PYP-like sensor domain (PAS domain) Homeodomain-like 74
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 73
PYP-like sensor domain (PAS domain) GAF domain-like 77
Homodimeric domain of signal transducing histidine kinase Histidine-containing phosphotransfer domain, HPT domain 77
Homeodomain-like Tetracyclin repressor-like, C-terminal domain 72
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 66
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 62
CheY-like CheY-like 66
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 63
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 63
CheY-like Histidine-containing phosphotransfer domain, HPT domain 66
"Winged helix" DNA-binding domain Periplasmic binding protein-like II 61
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 64
Formate dehydrogenase/DMSO reductase, domains 1-3 ADC-like 61
Translation proteins EF-G C-terminal domain-like 63
Sensory domain-like PYP-like sensor domain (PAS domain) 53
CheY-like HD-domain/PDEase-like 53
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB transmembrane domain 53
HAMP domain-like Homodimeric domain of signal transducing histidine kinase 55
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 53
ACT-like ACT-like 53
PLP-binding barrel Alanine racemase C-terminal domain-like 52
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB transmembrane domain 53
PurM N-terminal domain-like PurM C-terminal domain-like 52
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 53
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 52
HAMP domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 55
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 53
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 54
GAF domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 55
Calcium ATPase, transduction domain A HAD-like 54
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 53
EF-G C-terminal domain-like EF-G C-terminal domain-like 52
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 53
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 42
Metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 43
EF-G C-terminal domain-like Ribosomal protein S5 domain 2-like 42
TPR-like TPR-like 43
HD-domain/PDEase-like HD-domain/PDEase-like 42
CheY-like C-terminal effector domain of the bipartite response regulators 41
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 42
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 43
Nucleic acid-binding proteins RuvA domain 2-like 44
PreATP-grasp domain Rudiment single hybrid motif 42
PYP-like sensor domain (PAS domain) HD-domain/PDEase-like 44
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 42
Glutathione synthetase ATP-binding domain-like Succinyl-CoA synthetase domains 43
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 43
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 42
"Winged helix" DNA-binding domain PLP-dependent transferases 41
Nucleotide-diphospho-sugar transferases UDP-Glycosyltransferase/glycogen phosphorylase 41
lambda repressor-like DNA-binding domains LexA/Signal peptidase 41
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 42
cAMP-binding domain-like "Winged helix" DNA-binding domain 41
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 43
Nucleic acid-binding proteins Nucleic acid-binding proteins 44
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 43
HAD-like Calcium ATPase, transmembrane domain M 43
Glutathione synthetase ATP-binding domain-like NAD(P)-binding Rossmann-fold domains 43
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 41
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 43
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 42
HAMP domain-like PYP-like sensor domain (PAS domain) 44
Succinyl-CoA synthetase domains Succinyl-CoA synthetase domains 43
GAF domain-like Nucleotide cyclase 33
Class II aaRS and biotin synthetases Class II aaRS ABD-related 33
Homodimeric domain of signal transducing histidine kinase CheW-like 33
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 33
GAF domain-like Homeodomain-like 31
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 32
P-loop containing nucleoside triphosphate hydrolases HprK N-terminal domain-like 32
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 31
Acyl-CoA N-acyltransferases (Nat) Acyl-CoA N-acyltransferases (Nat) 31
CheY-like Nucleotide cyclase 33
Homeodomain-like Homeodomain-like 33
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 33
Triger factor/SurA peptide-binding domain-like FKBP-like 33
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 31
GAF domain-like Homodimeric domain of signal transducing histidine kinase 33
Alpha-L RNA-binding motif Pseudouridine synthase 32
Zinc beta-ribbon DNA primase core 32
Ferritin-like Rubredoxin-like 31
Methylesterase CheB, C-terminal domain CheY-like 32
TK C-terminal domain-like Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 33
NAD(P)-binding Rossmann-fold domains TrkA C-terminal domain-like 33
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 32
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 33
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 32
FAD/NAD(P)-binding domain 4Fe-4S ferredoxins 32
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 32
Sensory domain-like Homodimeric domain of signal transducing histidine kinase 33
GAF domain-like P-loop containing nucleoside triphosphate hydrolases 31
CheW-like CheY-like 31
"Winged helix" DNA-binding domain GntR ligand-binding domain-like 31
Sensory domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 33
4Fe-4S ferredoxins Nitrite and sulphite reductase 4Fe-4S domain-like 32
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 32
Aldolase AFP III-like domain 31
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 32
Thiamin diphosphate-binding fold (THDP-binding) Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 33
Chemotaxis receptor methyltransferase CheR, N-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 32
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheW-like 33
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 33
Translation proteins Ribosomal protein S5 domain 2-like 31
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 33
Histidine-containing phosphotransfer domain, HPT domain CheW-like 33
Chaperone J-domain HSP40/DnaJ peptide-binding domain 22
PUA domain-like Ribosomal protein S5 domain 2-like 21
GAF domain-like EAL domain-like 22
gp5 N-terminal domain-like Phage fibre proteins 21
MOP-like MOP-like 22
Nitrite/Sulfite reductase N-terminal domain-like 4Fe-4S ferredoxins 21
TK C-terminal domain-like 4Fe-4S ferredoxins 22
Staphylococcal nuclease Ada DNA repair protein, N-terminal domain (N-Ada 10) 21
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 22
MurCD N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 22
MetI-like MetI-like 21
CheY-like TPR-like 22
NagB/RpiA/CoA transferase-like alpha-helical ferredoxin 21
FAD-binding/transporter-associated domain-like alpha-helical ferredoxin 22
Periplasmic binding protein-like II Lysozyme-like 22
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Adenine nucleotide alpha hydrolases-like 22
Nucleotidyltransferase Poly A polymerase C-terminal region-like 22
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 22
NAD(P)-binding Rossmann-fold domains UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 21
DNA ligase/mRNA capping enzyme, catalytic domain RuvA domain 2-like 22
ThrRS/AlaRS common domain Class II aaRS and biotin synthetases 22
CBS-domain pair MgtE membrane domain-like 22
HD-domain/PDEase-like ACT-like 22
alpha-helical ferredoxin alpha-helical ferredoxin 22
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 22
Translation proteins SH3-like domain Nucleic acid-binding proteins 22
Penicillin binding protein dimerisation domain beta-lactamase/transpeptidase-like 22
MurCD N-terminal domain MurD-like peptide ligases, catalytic domain 21
MoeA N-terminal region -like MoeA C-terminal domain-like 22
Homeodomain-like Ribonuclease H-like 21
HCP-like HCP-like 22
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 21
4Fe-4S ferredoxins Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 22
P-loop containing nucleoside triphosphate hydrolases Restriction endonuclease-like 22
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 21
PDZ domain-like PDZ domain-like 21
HlyD-like secretion proteins HlyD-like secretion proteins 22
HD-domain/PDEase-like Nucleotidyltransferase 22
tRNA-binding arm Class II aaRS and biotin synthetases 21
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 21
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 22
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 22
Rhodanese/Cell cycle control phosphatase Ferritin-like 21
FAD-linked oxidases, C-terminal domain alpha-helical ferredoxin 22
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 21
Methyl-accepting chemotaxis protein (MCP) signaling domain Hemerythrin-like 21
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 21
alpha-helical ferredoxin Nucleotide-binding domain 22
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphoenolpyruvate/pyruvate domain 22
Barwin-like endoglucanases Sporulation related repeat 21
4Fe-4S ferredoxins FMN-linked oxidoreductases 21
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 22
TPR-like Nucleotide-diphospho-sugar transferases 21
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
Translation proteins ThrRS/AlaRS common domain 22
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
DnaK suppressor protein DksA, alpha-hairpin domain Glucocorticoid receptor-like (DNA-binding domain) 21
Radical SAM enzymes Radical SAM enzymes 22
6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 21
Zinc beta-ribbon P-loop containing nucleoside triphosphate hydrolases 21
DNA breaking-rejoining enzymes MOP-like 22
Nucleotidyltransferase ACT-like 22
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 21
P-loop containing nucleoside triphosphate hydrolases MOP-like 21
Trypsin-like serine proteases PDZ domain-like 21
Molybdenum cofactor biosynthesis proteins MoeA C-terminal domain-like 22
TTHA1013/TTHA0281-like Ribbon-helix-helix 21
Thiolase-like Thiolase-like 22
GAF domain-like CheY-like 22
Nucleic acid-binding proteins BRCT domain 22
lambda repressor-like DNA-binding domains RmlC-like cupins 21
4Fe-4S ferredoxins Fe-only hydrogenase 22
Aldehyde ferredoxin oxidoreductase, N-terminal domain Aldehyde ferredoxin oxidoreductase, C-terminal domains 21
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 21
DNA primase core P-loop containing nucleoside triphosphate hydrolases 21
4Fe-4S ferredoxins Radical SAM enzymes 21
PilZ domain-like PilZ domain-like 21
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 22
FAD/NAD-linked reductases, dimerisation (C-terminal) domain Rhodanese/Cell cycle control phosphatase 21
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 22
Nucleotide-diphospho-sugar transferases S-adenosyl-L-methionine-dependent methyltransferases 21
P-loop containing nucleoside triphosphate hydrolases TrpR-like 22
RuvA domain 2-like BRCT domain 22
2Fe-2S ferredoxin-like alpha-helical ferredoxin 21
FAD/NAD(P)-binding domain Rhodanese/Cell cycle control phosphatase 21
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphohistidine domain 22
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 22
4Fe-4S ferredoxins P-loop containing nucleoside triphosphate hydrolases 21
MoeA N-terminal region -like Molybdenum cofactor biosynthesis proteins 22
CBS-domain pair FAD-binding/transporter-associated domain-like 21
DNA methylase specificity domain DNA methylase specificity domain 22
Thiamin diphosphate-binding fold (THDP-binding) 4Fe-4S ferredoxins 22
HMA, heavy metal-associated domain HAD-like 11
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 11
Thioredoxin-like FAD/NAD(P)-binding domain 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
HprK N-terminal domain-like Isocitrate/Isopropylmalate dehydrogenase-like 11
Phase 1 flagellin Phase 1 flagellin 11
P-loop containing nucleoside triphosphate hydrolases Ribonuclease H-like 11
Rudiment single hybrid motif Single hybrid motif 11
NAD(P)-binding Rossmann-fold domains Glutamyl tRNA-reductase dimerization domain 11
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
Homocysteine S-methyltransferase Cobalamin (vitamin B12)-binding domain 11
beta-lactamase/transpeptidase-like Penicillin-binding protein 2x (pbp-2x), c-terminal domain 11
Aldolase post-HMGL domain-like 11
Dihydropteroate synthetase-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
Nucleic acid-binding proteins Prokaryotic type KH domain (KH-domain type II) 11
Nucleotidyltransferase Nucleotidyltransferase substrate binding subunit/domain 11
P-loop containing nucleoside triphosphate hydrolases C-terminal UvrC-binding domain of UvrB 11
RNase III domain-like dsRNA-binding domain-like 11
Zinc beta-ribbon Zinc beta-ribbon 11
PreATP-grasp domain Methylglyoxal synthase-like 11
GIY-YIG endonuclease RuvA domain 2-like 11
Nucleotidylyl transferase Nucleic acid-binding proteins 11
lambda integrase-like, N-terminal domain DNA breaking-rejoining enzymes 11
HAD-like Acyl-CoA N-acyltransferases (Nat) 11
Aspartate/glutamate racemase Aspartate/glutamate racemase 11
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 11
DHH phosphoesterases Nucleotidyltransferase 11
Radical SAM enzymes Nitrogenase accessory factor-like 11
Ribosomal protein S5 domain 2-like HSP90 C-terminal domain 11
Methionine synthase domain Cobalamin (vitamin B12)-binding domain 11
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 11
Nucleic acid-binding proteins PheT/TilS domain 11
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 11
SpoIIaa-like cAMP-binding domain-like 11
FwdE-like Molybdenum cofactor biosynthesis proteins 11
DNA clamp DNA clamp 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 11
GAF domain-like HD-domain/PDEase-like 11
Voltage-gated potassium channels NAD(P)-binding Rossmann-fold domains 11
HAMP domain-like Histidine-containing phosphotransfer domain, HPT domain 11
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 11
RuvA domain 2-like P-loop containing nucleoside triphosphate hydrolases 11
Lysozyme-like beta-lactamase/transpeptidase-like 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11
4Fe-4S ferredoxins 4Fe-4S ferredoxins 11
PTS system fructose IIA component-like HPr-like 11
Aminopeptidase/glucanase lid domain Zn-dependent exopeptidases 11
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 11
Carbamate kinase-like ACT-like 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
Nucleotide cyclase Hemerythrin-like 11
F1F0 ATP synthase subunit B, membrane domain HD-domain/PDEase-like 11
Nucleotide-diphospho-sugar transferases IpsF-like 11
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 11
Nucleic acid-binding proteins ArfGap/RecO-like zinc finger 11
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 11
S13-like H2TH domain Glucocorticoid receptor-like (DNA-binding domain) 11
Glutamine synthetase/guanido kinase GatB/YqeY motif 11
EspE N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
Methylesterase CheB, C-terminal domain Homodimeric domain of signal transducing histidine kinase 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
Homocysteine S-methyltransferase Dihydropteroate synthetase-like 11
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 11
DNA-glycosylase Nudix 11
NAD(P)-binding Rossmann-fold domains ACT-like 11
Nucleotidylyl transferase Riboflavin kinase-like 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 11
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 11
Alpha-L RNA-binding motif S-adenosyl-L-methionine-dependent methyltransferases 11
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 11
Periplasmic binding protein-like II EAL domain-like 11
PHP domain-like P-loop containing nucleoside triphosphate hydrolases 11
Epsilon subunit of F1F0-ATP synthase N-terminal domain Epsilon subunit of F1F0-ATP synthase C-terminal domain 11
Histidine-containing phosphotransfer domain, HPT domain SpoIIaa-like 11
2Fe-2S ferredoxin-like CO dehydrogenase ISP C-domain like 11
Glutamyl tRNA-reductase catalytic, N-terminal domain Glutamyl tRNA-reductase dimerization domain 11
post-HMGL domain-like Single hybrid motif 11
Cryptochrome/photolyase, N-terminal domain Cryptochrome/photolyase FAD-binding domain 11
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 11
Chemotaxis receptor methyltransferase CheR, N-terminal domain Homodimeric domain of signal transducing histidine kinase 11
Acyl-CoA N-acyltransferases (Nat) Activating enzymes of the ubiquitin-like proteins 11
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
Class II aaRS and biotin synthetases YbaK/ProRS associated domain 11
2Fe-2S ferredoxin-like Molybdenum cofactor-binding domain 11
R1 subunit of ribonucleotide reductase, N-terminal domain PFL-like glycyl radical enzymes 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
CO dehydrogenase ISP C-domain like CO dehydrogenase molybdoprotein N-domain-like 11
PHP domain-like UDP-Glycosyltransferase/glycogen phosphorylase 11
FliG FliG 11
SufE/NifU Fe-S cluster assembly (FSCA) domain-like 11
PLP-dependent transferases PLP-dependent transferases 11
Chemotaxis receptor methyltransferase CheR, N-terminal domain CheY-like 11
Ribonuclease H-like RuvA domain 2-like 11
CheY-like Ribosomal protein S5 domain 2-like 11
Adenine nucleotide alpha hydrolases-like S-adenosyl-L-methionine-dependent methyltransferases 11
Histidine-containing phosphotransfer domain, HPT domain Histidine-containing phosphotransfer domain, HPT domain 11
FAD-linked oxidoreductase ALDH-like 11
Nucleotidyltransferase substrate binding subunit/domain HD-domain/PDEase-like 11
Succinyl-CoA synthetase domains Acyl-CoA N-acyltransferases (Nat) 11
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 11
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain "Winged helix" DNA-binding domain 11
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 11
Cytochrome c Multiheme cytochromes 11
Histidine-containing phosphotransfer domain, HPT domain EspE N-terminal domain-like 11
5' to 3' exonuclease, C-terminal subdomain DNA/RNA polymerases 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
F1F0 ATP synthase subunit B, membrane domain Eukaryotic type KH-domain (KH-domain type I) 11
PheT/TilS domain Putative DNA-binding domain 11
Nucleic acid-binding proteins GAD domain-like 11
Cytochrome c oxidase subunit II-like, transmembrane region Cytochrome c 11
Cytochrome c oxidase subunit II-like, transmembrane region Cupredoxins 11
FAD/NAD(P)-binding domain HI0933 insert domain-like 11
Alpha-L RNA-binding motif P-loop containing nucleoside triphosphate hydrolases 11
YaeB-like AraD/HMP-PK domain-like 11
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 11
Rho N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
Nucleotide-diphospho-sugar transferases NAD(P)-binding Rossmann-fold domains 11
DHH phosphoesterases Poly A polymerase C-terminal region-like 11
YbaK/ProRS associated domain Class II aaRS ABD-related 11
HPr-like Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 11
E set domains Glycosyl hydrolase domain 11
Class II aaRS and biotin synthetases C-terminal domain of transcriptional repressors 11
PTS system fructose IIA component-like Phosphohistidine domain 11
Glutathione synthetase ATP-binding domain-like Single hybrid motif 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
CBS-domain pair Poly A polymerase C-terminal region-like 11
EreA/ChaN-like PDZ domain-like 11
Tex N-terminal region-like Ribonuclease H-like 11
Sensory domain-like Sensory domain-like 11
Eukaryotic type KH-domain (KH-domain type I) Nucleic acid-binding proteins 11
CBS-domain pair Nucleotide cyclase 11
Aconitase iron-sulfur domain LeuD/IlvD-like 11
EAL domain-like CBS-domain pair 11
Rhodanese/Cell cycle control phosphatase P-loop containing nucleoside triphosphate hydrolases 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain ACT-like 11
DHH phosphoesterases CBS-domain pair 11
PUA domain-like S-adenosyl-L-methionine-dependent methyltransferases 11
LysM domain LysM domain 11
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 11
YrdC/RibB RibA-like 11
Tetrapyrrole methylase HemD-like 11
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 11
FAD-binding/transporter-associated domain-like Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain 11
all-alpha NTP pyrophosphatases all-alpha NTP pyrophosphatases 11
P-loop containing nucleoside triphosphate hydrolases Phospholipase D/nuclease 11
GAF domain-like GAF domain-like 11
DhaL-like DAK1/DegV-like 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 11
N-terminal domain of MutM-like DNA repair proteins N-terminal domain of MutM-like DNA repair proteins 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 11
PspA lactotransferrin-binding region Duplicated hybrid motif 11
CarD-like TRCF domain-like 11
Glycerol-3-phosphate (1)-acyltransferase Acyl-CoA N-acyltransferases (Nat) 11
P-loop containing nucleoside triphosphate hydrolases CarD-like 11
Nucleotidylyl transferase tRNA-binding arm 11
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 11
Nucleic acid-binding proteins Anticodon-binding domain of PheRS 11
Acylphosphatase/BLUF domain-like YrdC/RibB 11
Tetrapyrrole methylase S-adenosyl-L-methionine-dependent methyltransferases 11
Glutamyl tRNA-reductase catalytic, N-terminal domain NAD(P)-binding Rossmann-fold domains 11
vWA-like OmpA-like 11
P-loop containing nucleoside triphosphate hydrolases Hypothetical protein YjiA, C-terminal domain 11
Thioredoxin-like Thioredoxin-like 11
ClpP/crotonase ClpP/crotonase 11
CbiG N-terminal domain-like CobE/GbiG C-terminal domain-like 11
P-loop containing nucleoside triphosphate hydrolases Isocitrate/Isopropylmalate dehydrogenase-like 11
Glucocorticoid receptor-like (DNA-binding domain) P-loop containing nucleoside triphosphate hydrolases 11
S-adenosyl-L-methionine-dependent methyltransferases PYP-like sensor domain (PAS domain) 11
P-loop containing nucleoside triphosphate hydrolases SMR domain-like 11
PTS system fructose IIA component-like Phosphoenolpyruvate/pyruvate domain 11
P-loop containing nucleoside triphosphate hydrolases Nitrogenase accessory factor-like 11
cAMP-binding domain-like CBS-domain pair 11
Diaminopimelate epimerase-like Diaminopimelate epimerase-like 11
PreATP-grasp domain PreATP-grasp domain 11
HAMP domain-like Methyl-accepting chemotaxis protein (MCP) signaling domain 11
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases CBS-domain pair 11
EspE N-terminal domain-like CheW-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 11
Periplasmic binding protein-like II GlnB-like 11
HD-domain/PDEase-like P-loop containing nucleoside triphosphate hydrolases 11
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 11
GAF domain-like Histidine-containing phosphotransfer domain, HPT domain 11
NAD(P)-binding Rossmann-fold domains Bet v1-like 11
Tex N-terminal region-like RuvA domain 2-like 11
PIN domain-like P-loop containing nucleoside triphosphate hydrolases 11
E set domains (Trans)glycosidases 11
Class II aaRS and biotin synthetases GAD domain-like 11
Dihydropteroate synthetase-like Methionine synthase domain 11
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 11
MoeA N-terminal region -like Periplasmic binding protein-like II 11
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 11
Multiheme cytochromes Multiheme cytochromes 11
Alpha subunit of glutamate synthase, C-terminal domain FAD/NAD(P)-binding domain 11
Oligoxyloglucan reducing end-specific cellobiohydrolase Oligoxyloglucan reducing end-specific cellobiohydrolase 11
Sensory domain-like HD-domain/PDEase-like 11
Periplasmic binding protein-like II Nucleotide cyclase 11
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 11
"Winged helix" DNA-binding domain NagB/RpiA/CoA transferase-like 11
GroEL equatorial domain-like GroEL apical domain-like 11
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 11
S-adenosyl-L-methionine-dependent methyltransferases S-adenosyl-L-methionine-dependent methyltransferases 11
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 11
L30e-like alpha/beta knot 11
alpha-helical ferredoxin Respiratory nitrate reductase 1 gamma chain 11
Pseudouridine synthase P-loop containing nucleoside triphosphate hydrolases 11
Bacterial fluorinating enzyme, N-terminal domain Bacterial fluorinating enzyme, C-terminal domain 11
L9 N-domain-like Ribosomal protein L9 C-domain 11
Nucleotidyltransferase TGS-like 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
EspE N-terminal domain-like Homodimeric domain of signal transducing histidine kinase 11
UbiD C-terminal domain-like UbiD C-terminal domain-like 11
Metal cation-transporting ATPase, ATP-binding domain N HAD-like 11
CO dehydrogenase molybdoprotein N-domain-like Molybdenum cofactor-binding domain 11
S-adenosyl-L-methionine-dependent methyltransferases Hedgehog/intein (Hint) domain 11
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 11
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 11
PTS system fructose IIA component-like Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 11
N-terminal domain of DnaB helicase P-loop containing nucleoside triphosphate hydrolases 11
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 11
Cytidine deaminase-like Dihydrofolate reductase-like 11
Metallo-hydrolase/oxidoreductase Flavoproteins 11
Trigger factor ribosome-binding domain FKBP-like 11
(Trans)glycosidases Glycosyl hydrolase domain 11
HD-domain/PDEase-like TGS-like 11
PIN domain-like DNA/RNA polymerases 11
Calcium ATPase, transduction domain A Metal cation-transporting ATPase, ATP-binding domain N 11
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 11
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 11
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 11
Transcription factor NusA, N-terminal domain Nucleic acid-binding proteins 11
TolA/TonB C-terminal domain TolA/TonB C-terminal domain 11
ACT-like Formyltransferase 11
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 11
Prokaryotic type KH domain (KH-domain type II) Prokaryotic type KH domain (KH-domain type II) 11
MgtE N-terminal domain-like MgtE membrane domain-like 11
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 11
Rubredoxin-like Superoxide reductase-like 11
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 11
Eukaryotic type KH-domain (KH-domain type I) HD-domain/PDEase-like 11
Adenine nucleotide alpha hydrolases-like Adenine nucleotide alpha hydrolases-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
PreATP-grasp domain Aldolase 11
PreATP-grasp domain Single hybrid motif 11
Nqo1 FMN-binding domain-like alpha-helical ferredoxin 11
ACT-like PYP-like sensor domain (PAS domain) 11
Nitrogenase accessory factor-like Nitrogenase accessory factor-like 11
Cupredoxins Cytochrome c 11
Type III secretion system domain Type III secretion system domain 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
Nucleotide-diphospho-sugar transferases HD-domain/PDEase-like 11
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 11
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
N-terminal domain of MutM-like DNA repair proteins Glucocorticoid receptor-like (DNA-binding domain) 11
P-loop containing nucleoside triphosphate hydrolases TGS-like 11
P-loop containing nucleoside triphosphate hydrolases Phosphoglycerate mutase-like 11
Sensory domain-like GAF domain-like 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
ParB/Sulfiredoxin KorB DNA-binding domain-like 11
Phospholipase D/nuclease Phospholipase D/nuclease 11
Macro domain-like Zn-dependent exopeptidases 11
Tex N-terminal region-like Nucleic acid-binding proteins 11
PYP-like sensor domain (PAS domain) Histidine-containing phosphotransfer domain, HPT domain 11
Elongation factor Ts (EF-Ts), dimerisation domain Elongation factor Ts (EF-Ts), dimerisation domain 11
Chemotaxis receptor methyltransferase CheR, N-terminal domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Inosine monophosphate dehydrogenase (IMPDH) Inosine monophosphate dehydrogenase (IMPDH) 11
Translation proteins PRC-barrel domain 11
TolB, N-terminal domain DPP6 N-terminal domain-like 11
Sensory domain-like HAMP domain-like 11
RuvA domain 2-like RuvA domain 2-like 11
ACT-like Homeodomain-like 11
Methylesterase CheB, C-terminal domain PYP-like sensor domain (PAS domain) 11
Homocysteine S-methyltransferase Methionine synthase domain 11
Chorismate mutase II Periplasmic binding protein-like II 11
Chemotaxis receptor methyltransferase CheR, N-terminal domain PYP-like sensor domain (PAS domain) 11
HPr-like Phosphohistidine domain 11
Aldolase Sensory domain-like 11
alpha-helical ferredoxin FAD/NAD(P)-binding domain 11
Nucleic acid-binding proteins DNA helicase RuvA subunit, C-terminal domain 11
Riboflavin synthase domain-like Riboflavin synthase domain-like 11
PheT/TilS domain Anticodon-binding domain of PheRS 11
Glutathione synthetase ATP-binding domain-like Acyl-CoA N-acyltransferases (Nat) 11
Molybdenum cofactor biosynthesis proteins Periplasmic binding protein-like II 11
PDZ domain-like ClpP/crotonase 11
PheT/TilS domain Class II aaRS and biotin synthetases 11
Nucleotidylyl transferase Ribosomal protein L25-like 11
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 11
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
HAMP domain-like EAL domain-like 11
2Fe-2S ferredoxin-like 4Fe-4S ferredoxins 11
PUA domain-like Nucleotidylyl transferase 11
Glutathione synthetase ATP-binding domain-like post-HMGL domain-like 11
ACT-like 4Fe-4S ferredoxins 11
Enolase N-terminal domain-like Enolase C-terminal domain-like 11
Glutathione synthetase ATP-binding domain-like Phosphoenolpyruvate/pyruvate domain 11
RuvA domain 2-like DNA helicase RuvA subunit, C-terminal domain 11
"Winged helix" DNA-binding domain GAF domain-like 11
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 11
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
DNA repair protein MutS, domain III SMR domain-like 11
Nucleic acid-binding proteins S-adenosyl-L-methionine-dependent methyltransferases 11
Nqo1C-terminal domain-like Nucleotide-binding domain 11
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 11
Methylesterase CheB, C-terminal domain Chemotaxis receptor methyltransferase CheR, N-terminal domain 11
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 11
S-adenosyl-L-methionine-dependent methyltransferases CheY-like 11
Rudiment single hybrid motif post-HMGL domain-like 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
Nqo1C-terminal domain-like alpha-helical ferredoxin 11
EAL domain-like Sensory domain-like 11
Penicillin binding protein dimerisation domain Penicillin-binding protein 2x (pbp-2x), c-terminal domain 11
CO dehydrogenase ISP C-domain like Molybdenum cofactor-binding domain 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
Carbamate kinase-like PUA domain-like 11
"Winged helix" DNA-binding domain S-adenosyl-L-methionine-dependent methyltransferases 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
CBS-domain pair ACT-like 11
"Winged helix" DNA-binding domain C-terminal domain of transcriptional repressors 11
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 11
C-terminal UvrC-binding domain of UvrB RuvA domain 2-like 11
Acyl-CoA N-acyltransferases (Nat) FMN-dependent nitroreductase-like 11
Metal cation-transporting ATPase, ATP-binding domain N Calcium ATPase, transmembrane domain M 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 11
Translation proteins Initiation factor IF2/eIF5b, domain 3 11
Nucleic acid-binding proteins Putative DNA-binding domain 11
YjeF N-terminal domain-like Ribokinase-like 11
GroEL-intermediate domain like GroEL apical domain-like 11
CheY-like EAL domain-like 11
Periplasmic binding protein-like II GAF domain-like 11
Nucleotidyltransferase substrate binding subunit/domain ACT-like 11
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 11
HD-domain/PDEase-like Nucleotide cyclase 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Nucleic acid-binding proteins 11
Methyl-accepting chemotaxis protein (MCP) signaling domain Methyl-accepting chemotaxis protein (MCP) signaling domain 11
CheY-like SpoIIaa-like 11
EspE N-terminal domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Homo-oligomeric flavin-containing Cys decarboxylases, HFCD CoaB-like 11
EAL domain-like HD-domain/PDEase-like 11
Aldolase Single hybrid motif 11
"Winged helix" DNA-binding domain Class II aaRS and biotin synthetases 11
Nucleotide cyclase TPR-like 11
YhbC-like, N-terminal domain YhbC-like, C-terminal domain 11
Ribonuclease H-like Nucleic acid-binding proteins 11
GIY-YIG endonuclease C-terminal UvrC-binding domain of UvrB 11
Nucleotide-diphospho-sugar transferases Radical SAM enzymes 11
Clc chloride channel CBS-domain pair 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
Putative DNA-binding domain Anticodon-binding domain of PheRS 11
CheC-like Surface presentation of antigens (SPOA) 11
Regulatory protein AraC Homeodomain-like 11
MgtE N-terminal domain-like CBS-domain pair 11
HPr-like Phosphoenolpyruvate/pyruvate domain 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase HSP90 C-terminal domain 11
Ribosomal protein L6 Ribosomal protein L6 11
PK beta-barrel domain-like PK C-terminal domain-like 11
Class II aaRS and biotin synthetases Translation proteins 11
Sm-like ribonucleoproteins Mechanosensitive channel protein MscS (YggB), C-terminal domain 11
GreA transcript cleavage protein, N-terminal domain FKBP-like 11
Homeodomain-like Probable bacterial effector-binding domain 11
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 11
Alpha subunit of glutamate synthase, C-terminal domain 4Fe-4S ferredoxins 11
Translation proteins Translation proteins 11
UROD/MetE-like UROD/MetE-like 11
4Fe-4S ferredoxins FMN-dependent nitroreductase-like 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
Translation proteins "Winged helix" DNA-binding domain 11
Folate-binding domain Aminomethyltransferase beta-barrel domain 11
Transcription factor NusA, N-terminal domain Prokaryotic type KH domain (KH-domain type II) 11
MoeA C-terminal domain-like Periplasmic binding protein-like II 11
Rudiment single hybrid motif Aldolase 11
Chorismate mutase II ACT-like 11
ParB/Sulfiredoxin S-adenosyl-L-methionine-dependent methyltransferases 11
L,D-transpeptidase catalytic domain-like NTF2-like 11
2Fe-2S ferredoxin-like CO dehydrogenase molybdoprotein N-domain-like 11
Dihydropteroate synthetase-like Cobalamin (vitamin B12)-binding domain 11
NAD(P)-binding Rossmann-fold domains Siroheme synthase middle domains-like 11
SIS domain CBS-domain pair 11
2Fe-2S ferredoxin-like Fe-only hydrogenase 11
vWA-like beta-Roll 11
PreATP-grasp domain post-HMGL domain-like 11
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) S-adenosyl-L-methionine-dependent methyltransferases 11
S-adenosyl-L-methionine-dependent methyltransferases ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Lysozyme-like LysM domain 11
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 11
Formyltransferase FMT C-terminal domain-like 11
NTF2-like Sec-C motif 11
NAD(P)-binding Rossmann-fold domains Acyl-CoA N-acyltransferases (Nat) 11
TGS-like ACT-like 11
HAMP domain-like CheY-like 11
GroEL equatorial domain-like GroEL-intermediate domain like 11
Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), C-terminal domain 11
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 11
PUA domain-like alpha/beta knot 11
TolB, N-terminal domain Integrin alpha N-terminal domain 11
Serine metabolism enzymes domain Serine metabolism enzymes domain 11
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
Prokaryotic type I DNA topoisomerase Zinc beta-ribbon 11
SirA-like DsrEFH-like 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
RBP11-like subunits of RNA polymerase C-terminal domain of RNA polymerase alpha subunit 11
2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain Alkaline phosphatase-like 11
CBS-domain pair Nucleotidyltransferase 11
Rho N-terminal domain-like Nucleic acid-binding proteins 11
ParB/Sulfiredoxin Hedgehog/intein (Hint) domain 11
Thioredoxin-like Six-hairpin glycosidases 11
HMA, heavy metal-associated domain HMA, heavy metal-associated domain 11
P-loop containing nucleoside triphosphate hydrolases Adenine nucleotide alpha hydrolases-like 11
Periplasmic binding protein-like II PYP-like sensor domain (PAS domain) 11
HAMP domain-like Nucleotide cyclase 11
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 11
Ribbon-helix-helix ACT-like 11
ARM repeat ARM repeat 11
SP0561-like PYP-like sensor domain (PAS domain) 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
CheY-like PP2C-like 11
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
Cupredoxins Cupredoxins 11
Periplasmic binding protein-like II ACT-like 11
Methylesterase CheB, C-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
Carbon-nitrogen hydrolase Adenine nucleotide alpha hydrolases-like 11
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 11
"Winged helix" DNA-binding domain NAD(P)-binding Rossmann-fold domains 11
YajQ-like YajQ-like 11
Methylesterase CheB, C-terminal domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Voltage-gated potassium channels TrkA C-terminal domain-like 11
FMN-binding split barrel UbiD C-terminal domain-like 11
Nucleotide-diphospho-sugar transferases RmlC-like cupins 11
S-adenosyl-L-methionine-dependent methyltransferases Homodimeric domain of signal transducing histidine kinase 11
GroES-like NAD(P)-binding Rossmann-fold domains 11
Glutathione synthetase ATP-binding domain-like Aldolase 11
Cation efflux protein cytoplasmic domain-like Cation efflux protein cytoplasmic domain-like 11
Activating enzymes of the ubiquitin-like proteins FMN-dependent nitroreductase-like 11
Cytochrome c Cytochrome c 11
ACT-like P-loop containing nucleoside triphosphate hydrolases 11

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