SUPERFAMILY 1.75 HMM library and genome assignments server

Domain combination pairs in Azoarcus sp. BH72

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

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Adjacent domain pairs graph

Graph of adjacent domain pairs.


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Domain combination pairs

710 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 5226
"Winged helix" DNA-binding domain Periplasmic binding protein-like II 442
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 2913
PYP-like sensor domain (PAS domain) PYP-like sensor domain (PAS domain) 2822
PYP-like sensor domain (PAS domain) Nucleotide cyclase 2720
Nucleotide cyclase EAL domain-like 2617
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 2415
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 229
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 2213
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 205
PYP-like sensor domain (PAS domain) EAL domain-like 1812
CheY-like C-terminal effector domain of the bipartite response regulators 182
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 165
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 155
CheY-like P-loop containing nucleoside triphosphate hydrolases 144
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheY-like 1413
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 133
CheY-like Homeodomain-like 133
Homodimeric domain of signal transducing histidine kinase CheY-like 1211
PYP-like sensor domain (PAS domain) CheY-like 1211
Actin-like ATPase domain Actin-like ATPase domain 123
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 113
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 114
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB transmembrane domain 114
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB transmembrane domain 114
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 114
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 118
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 114
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 114
Ferredoxin reductase-like, C-terminal NADP-linked domain 2Fe-2S ferredoxin-like 102
CheY-like Nucleotide cyclase 109
Thioredoxin-like GST C-terminal domain-like 101
Thiolase-like Thiolase-like 102
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 103
Riboflavin synthase domain-like 2Fe-2S ferredoxin-like 102
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 102
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 94
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Histidine-containing phosphotransfer domain, HPT domain 97
Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase C-terminal domain-like 92
Homeodomain-like Homeodomain-like 93
Homeodomain-like Tetracyclin repressor-like, C-terminal domain 92
P-loop containing nucleoside triphosphate hydrolases Translation proteins 95
Cytochrome c Cytochrome c 84
Homodimeric domain of signal transducing histidine kinase Histidine-containing phosphotransfer domain, HPT domain 86
Formate dehydrogenase/DMSO reductase, domains 1-3 ADC-like 83
HAMP domain-like Homodimeric domain of signal transducing histidine kinase 84
HAMP domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 84
Sensory domain-like Homodimeric domain of signal transducing histidine kinase 74
cAMP-binding domain-like "Winged helix" DNA-binding domain 72
GAF domain-like Nucleotide cyclase 77
Sensory domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 74
GroES-like NAD(P)-binding Rossmann-fold domains 72
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 65
CheY-like CheY-like 66
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 63
EspE N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 64
"Winged helix" DNA-binding domain GntR ligand-binding domain-like 61
ISP domain Bet v1-like 63
Ribosomal protein S5 domain 2-like P-loop containing nucleoside triphosphate hydrolases 65
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 64
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 64
CheY-like Histidine-containing phosphotransfer domain, HPT domain 66
TPR-like TPR-like 54
GAF domain-like EAL domain-like 55
Alpha-L RNA-binding motif Pseudouridine synthase 52
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 53
PYP-like sensor domain (PAS domain) Methyl-accepting chemotaxis protein (MCP) signaling domain 53
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 52
PreATP-grasp domain Rudiment single hybrid motif 52
Trypsin-like serine proteases PDZ domain-like 54
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 53
Sensory domain-like HAMP domain-like 53
PurM N-terminal domain-like PurM C-terminal domain-like 52
Triger factor/SurA peptide-binding domain-like FKBP-like 55
CheY-like EAL domain-like 55
Composite domain of metallo-dependent hydrolases Metallo-dependent hydrolases 53
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 53
(Trans)glycosidases Glycosyl hydrolase domain 54
Translation proteins EF-G C-terminal domain-like 53
GAF domain-like PYP-like sensor domain (PAS domain) 55
PDZ domain-like PDZ domain-like 54
P-loop containing nucleoside triphosphate hydrolases MOP-like 41
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 44
HAMP domain-like Nucleotide cyclase 44
EF-G C-terminal domain-like EF-G C-terminal domain-like 42
Aldolase post-HMGL domain-like 42
Histidine-containing phosphotransfer domain, HPT domain CheW-like 42
Phospholipase D/nuclease Phospholipase D/nuclease 44
Calcium ATPase, transduction domain A HAD-like 44
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheW-like 42
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 42
6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 41
PYP-like sensor domain (PAS domain) Histidine-containing phosphotransfer domain, HPT domain 44
ACT-like ACT-like 44
GAF domain-like HD-domain/PDEase-like 44
NAD(P)-binding Rossmann-fold domains UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 41
HAD-like Calcium ATPase, transmembrane domain M 44
GAF domain-like P-loop containing nucleoside triphosphate hydrolases 43
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 44
6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 43
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 44
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 42
HD-domain/PDEase-like CheY-like 42
NAD(P)-binding Rossmann-fold domains TrkA C-terminal domain-like 44
ClpP/crotonase ClpP/crotonase 42
Adenine nucleotide alpha hydrolases-like DHS-like NAD/FAD-binding domain 41
"Winged helix" DNA-binding domain Dimeric alpha+beta barrel 41
Nqo1 middle domain-like Nqo1C-terminal domain-like 32
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 32
HD-domain/PDEase-like ACT-like 32
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 32
Nucleic acid-binding proteins Nucleic acid-binding proteins 33
GAF domain-like Homeodomain-like 32
gp5 N-terminal domain-like Phage fibre proteins 32
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 31
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 33
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 32
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 31
Phage tail proteins gp5 N-terminal domain-like 32
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 32
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 31
GAF domain-like GAF domain-like 33
Homodimeric domain of signal transducing histidine kinase CheW-like 31
DnaK suppressor protein DksA, alpha-hairpin domain Glucocorticoid receptor-like (DNA-binding domain) 31
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 32
HAMP domain-like PYP-like sensor domain (PAS domain) 33
Nqo1 FMN-binding domain-like Nqo1 middle domain-like 32
Nucleotidyltransferase ACT-like 32
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 31
MurCD N-terminal domain MurD-like peptide ligases, peptide-binding domain 31
PLP-binding barrel Alanine racemase C-terminal domain-like 32
Nqo1 FMN-binding domain-like Nqo1C-terminal domain-like 32
Phage tail proteins Phage tail proteins 32
Class I glutamine amidotransferase-like Homeodomain-like 33
"Winged helix" DNA-binding domain PLP-dependent transferases 31
NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains 33
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 31
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 32
"Winged helix" DNA-binding domain GAF domain-like 31
Phage tail proteins Phage fibre proteins 32
E set domains (Trans)glycosidases 33
GroEL-intermediate domain like GroEL apical domain-like 31
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 33
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Adenine nucleotide alpha hydrolases-like 31
Nucleic acid-binding proteins RuvA domain 2-like 33
CheW-like CheY-like 32
HD-domain/PDEase-like Nucleotidyltransferase 32
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 31
MurCD N-terminal domain MurD-like peptide ligases, catalytic domain 31
CBS-domain pair FAD-binding/transporter-associated domain-like 31
GroEL equatorial domain-like GroEL apical domain-like 31
RmlC-like cupins Homeodomain-like 31
GroEL equatorial domain-like GroEL-intermediate domain like 31
Class II aaRS and biotin synthetases Class II aaRS ABD-related 33
Glutathione synthetase ATP-binding domain-like Single hybrid motif 21
Glutathione synthetase ATP-binding domain-like Succinyl-CoA synthetase domains 22
tRNA-binding arm Class II aaRS and biotin synthetases 21
GreA transcript cleavage protein, N-terminal domain FKBP-like 22
Thioredoxin-like Nqo1 FMN-binding domain-like 21
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 21
Thioredoxin-like Nqo1C-terminal domain-like 21
2Fe-2S ferredoxin-like 4Fe-4S ferredoxins 21
Rudiment single hybrid motif Single hybrid motif 21
HCP-like Lysozyme-like 21
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 21
PP2C-like Protein kinase-like (PK-like) 21
Translation proteins SH3-like domain Nucleic acid-binding proteins 22
CheY-like GAF domain-like 22
Aminoacid dehydrogenase-like, N-terminal domain Isocitrate/Isopropylmalate dehydrogenase-like 21
Cobalamin (vitamin B12)-binding domain Cobalamin (vitamin B12)-dependent enzymes 22
Nucleotide cyclase SMAD/FHA domain 21
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 22
NagB/RpiA/CoA transferase-like NagB/RpiA/CoA transferase-like 21
P-loop containing nucleoside triphosphate hydrolases Hypothetical protein YjiA, C-terminal domain 21
FAD-linked oxidases, C-terminal domain alpha-helical ferredoxin 22
Penicillin binding protein dimerisation domain beta-lactamase/transpeptidase-like 21
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 22
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
P-loop containing nucleoside triphosphate hydrolases Restriction endonuclease-like 22
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 21
Protein kinase-like (PK-like) cAMP-binding domain-like 21
L30e-like alpha/beta knot 21
PGBD-like Lysozyme-like 22
EF-G C-terminal domain-like Ribosomal protein S5 domain 2-like 21
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 22
CheY-like Methylesterase CheB, C-terminal domain 21
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 22
E set domains Glycosyl hydrolase domain 22
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 22
TGS-like ACT-like 21
Single hybrid motif Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 22
MOP-like MOP-like 22
MoeA N-terminal region -like Molybdenum cofactor biosynthesis proteins 21
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex CoA-dependent acyltransferases 22
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 21
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 22
ThrRS/AlaRS common domain Class II aaRS and biotin synthetases 22
FAD-linked reductases, C-terminal domain 4Fe-4S ferredoxins 21
Thiamin diphosphate-binding fold (THDP-binding) Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 22
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
HAMP domain-like EAL domain-like 22
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 22
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 21
HD-domain/PDEase-like TGS-like 21
Nucleotidyltransferase TGS-like 21
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 22
Nqo1 FMN-binding domain-like alpha-helical ferredoxin 21
Molybdenum cofactor biosynthesis proteins MoeA C-terminal domain-like 21
Lysozyme-like beta-lactamase/transpeptidase-like 22
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 21
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 22
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 22
2Fe-2S ferredoxin-like CO dehydrogenase ISP C-domain like 22
Chemotaxis receptor methyltransferase CheR, N-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 21
2Fe-2S ferredoxin-like Formate dehydrogenase/DMSO reductase, domains 1-3 21
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 22
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 22
Thioredoxin-like Nqo1 middle domain-like 21
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 21
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 22
MoeA N-terminal region -like MoeA C-terminal domain-like 21
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 21
FAD/NAD(P)-binding domain HI0933 insert domain-like 21
Nucleotidyltransferase Poly A polymerase C-terminal region-like 22
Nucleotidyltransferase Nucleotidyltransferase substrate binding subunit/domain 22
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 22
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 22
PreATP-grasp domain Single hybrid motif 21
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 21
Enolase N-terminal domain-like Enolase C-terminal domain-like 21
Ligand-binding domain in the NO signalling and Golgi transport Homeodomain-like 21
4Fe-4S ferredoxins ADC-like 21
4Fe-4S ferredoxins Formate dehydrogenase/DMSO reductase, domains 1-3 21
Single hybrid motif CoA-dependent acyltransferases 22
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 21
Chaperone J-domain HSP40/DnaJ peptide-binding domain 22
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 21
ClpP/crotonase 6-phosphogluconate dehydrogenase C-terminal domain-like 22
HD-domain/PDEase-like HD-domain/PDEase-like 22
MetI-like MetI-like 21
FAD/NAD(P)-binding domain 4Fe-4S ferredoxins 21
FAD-binding/transporter-associated domain-like alpha-helical ferredoxin 22
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 22
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 22
HAMP domain-like Methyl-accepting chemotaxis protein (MCP) signaling domain 22
Ligand-binding domain in the NO signalling and Golgi transport P-loop containing nucleoside triphosphate hydrolases 21
Aconitase iron-sulfur domain LeuD/IlvD-like 22
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 22
Translation proteins Ribosomal protein S5 domain 2-like 21
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 22
Folate-binding domain Aminomethyltransferase beta-barrel domain 21
PDZ domain-like ClpP/crotonase 21
Quinoprotein alcohol dehydrogenase-like Cytochrome c 21
2Fe-2S ferredoxin-like ADC-like 21
NAD(P)-binding Rossmann-fold domains ACT-like 22
HMA, heavy metal-associated domain HAD-like 22
GAF domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 22
TrkA C-terminal domain-like TrkA C-terminal domain-like 22
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 21
NAD(P)-binding Rossmann-fold domains Isocitrate/Isopropylmalate dehydrogenase-like 21
ClpP/crotonase NAD(P)-binding Rossmann-fold domains 22
Glucocorticoid receptor-like (DNA-binding domain) P-loop containing nucleoside triphosphate hydrolases 11
DNA ligase/mRNA capping enzyme, catalytic domain Prim-pol domain 11
Zinc beta-ribbon Prokaryotic SH3-related domain 11
Glutamyl tRNA-reductase catalytic, N-terminal domain NAD(P)-binding Rossmann-fold domains 11
Acylphosphatase/BLUF domain-like YrdC/RibB 11
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 11
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 11
Voltage-gated potassium channels NAD(P)-binding Rossmann-fold domains 11
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 11
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 11
Class II aaRS and biotin synthetases C-terminal domain of transcriptional repressors 11
Metallo-hydrolase/oxidoreductase Flavoproteins 11
Adenine nucleotide alpha hydrolases-like MesJ substrate recognition domain-like 11
FAD-linked oxidoreductase ALDH-like 11
5' to 3' exonuclease, C-terminal subdomain DNA/RNA polymerases 11
CalX-like Cadherin-like 11
Glutamine synthetase/guanido kinase GatB/YqeY motif 11
Restriction endonuclease-like Zinc beta-ribbon 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
Ferritin-like Ferritin-like 11
YrdC/RibB RibA-like 11
FliG FliG 11
Glutathione synthetase ATP-binding domain-like Phosphoenolpyruvate/pyruvate domain 11
P-loop containing nucleoside triphosphate hydrolases CarD-like 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
(Trans)glycosidases (Trans)glycosidases 11
Dihydropteroate synthetase-like Cobalamin (vitamin B12)-binding domain 11
RuvA domain 2-like DNA helicase RuvA subunit, C-terminal domain 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) Methylated DNA-protein cysteine methyltransferase domain 11
MFS general substrate transporter Glycerol-3-phosphate (1)-acyltransferase 11
Rhodanese/Cell cycle control phosphatase Rhodanese/Cell cycle control phosphatase 11
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 11
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 11
FGAM synthase PurL, linker domain PurM N-terminal domain-like 11
RBP11-like subunits of RNA polymerase C-terminal domain of RNA polymerase alpha subunit 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 11
FMN-binding split barrel GAF domain-like 11
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 11
Tryptophan synthase beta subunit-like PLP-dependent enzymes ACT-like 11
Ribonuclease H-like Nucleic acid-binding proteins 11
Cupredoxins Cupredoxins 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
lambda repressor-like DNA-binding domains P-loop containing nucleoside triphosphate hydrolases 11
alpha-helical ferredoxin Nucleotide-binding domain 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) Homeodomain-like 11
Cobalamin (vitamin B12)-binding domain Methionine synthase activation domain-like 11
FAD/NAD(P)-binding domain Nitrite and sulphite reductase 4Fe-4S domain-like 11
Homocysteine S-methyltransferase Methionine synthase domain 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
Molybdenum cofactor-binding domain Molybdenum cofactor-binding domain 11
Succinyl-CoA synthetase domains Succinyl-CoA synthetase domains 11
"Winged helix" DNA-binding domain LexA/Signal peptidase 11
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 11
PurS-like PurM C-terminal domain-like 11
Elongation factor Ts (EF-Ts), dimerisation domain Elongation factor Ts (EF-Ts), dimerisation domain 11
PheT/TilS domain Anticodon-binding domain of PheRS 11
Nucleotidylyl transferase Riboflavin kinase-like 11
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 11
Nucleic acid-binding proteins DNA helicase RuvA subunit, C-terminal domain 11
Protein kinase-like (PK-like) Protein kinase-like (PK-like) 11
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 11
LysM domain TPR-like 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphoenolpyruvate/pyruvate domain 11
PheT/TilS domain Class II aaRS and biotin synthetases 11
CO dehydrogenase molybdoprotein N-domain-like Molybdenum cofactor-binding domain 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
RuvA domain 2-like JAB1/MPN domain 11
Metal cation-transporting ATPase, ATP-binding domain N HAD-like 11
Chorismate mutase II Periplasmic binding protein-like II 11
Periplasmic binding protein-like II ACT-like 11
FAD-binding/transporter-associated domain-like CO dehydrogenase flavoprotein C-terminal domain-like 11
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 11
PurS-like Class I glutamine amidotransferase-like 11
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 11
(Trans)glycosidases Nucleotide-diphospho-sugar transferases 11
CO dehydrogenase ISP C-domain like CO dehydrogenase flavoprotein C-terminal domain-like 11
Leukotriene A4 hydrolase N-terminal domain Metalloproteases ("zincins"), catalytic domain 11
Cytochrome c oxidase subunit II-like, transmembrane region Cupredoxins 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FMN-linked oxidoreductases 11
Homo-oligomeric flavin-containing Cys decarboxylases, HFCD CoaB-like 11
Nucleic acid-binding proteins GAD domain-like 11
"Winged helix" DNA-binding domain Chorismate lyase-like 11
PIN domain-like Ribonuclease H-like 11
Protein kinase-like (PK-like) HAMP domain-like 11
Rad51 N-terminal domain-like Rad51 N-terminal domain-like 11
Rho N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 11
HprK N-terminal domain-like PEP carboxykinase-like 11
post-HMGL domain-like 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 11
Nucleic acid-binding proteins Anticodon-binding domain of PheRS 11
Dihydropteroate synthetase-like Methionine synthase activation domain-like 11
Cytochrome c oxidase subunit I-like Cytochrome c oxidase subunit III-like 11
RuvA domain 2-like MCP/YpsA-like 11
Ammonium transporter Nucleotide cyclase 11
Riboflavin synthase domain-like Riboflavin synthase domain-like 11
PheT/TilS domain Putative DNA-binding domain 11
Tropomyosin Duplicated hybrid motif 11
Histidine-containing phosphotransfer domain, HPT domain Histidine-containing phosphotransfer domain, HPT domain 11
L,D-transpeptidase catalytic domain-like NTF2-like 11
GAF domain-like Homodimeric domain of signal transducing histidine kinase 11
Carbamate kinase-like PUA domain-like 11
Cytidine deaminase-like Dihydrofolate reductase-like 11
Protein kinase-like (PK-like) GAF domain-like 11
Prokaryotic type KH domain (KH-domain type II) Prokaryotic type KH domain (KH-domain type II) 11
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 11
Macro domain-like Zn-dependent exopeptidases 11
GroES-like GroES-like 11
Thioredoxin-like FAD/NAD(P)-binding domain 11
Tex N-terminal region-like Ribonuclease H-like 11
N-terminal domain of DnaB helicase P-loop containing nucleoside triphosphate hydrolases 11
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 11
alpha/beta-Hydrolases S-adenosyl-L-methionine-dependent methyltransferases 11
Acyl-CoA N-acyltransferases (Nat) alpha/beta-Hydrolases 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
Ammonium transporter EAL domain-like 11
Ammonium transporter PYP-like sensor domain (PAS domain) 11
Nitrite and sulphite reductase 4Fe-4S domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
4Fe-4S ferredoxins Riboflavin synthase domain-like 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 11
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 11
Cobalamin (vitamin B12)-binding domain P-loop containing nucleoside triphosphate hydrolases 11
Formyltransferase FMT C-terminal domain-like 11
Cobalamin (vitamin B12)-binding domain Radical SAM enzymes 11
Adenine nucleotide alpha hydrolases-like PheT/TilS domain 11
N-terminal domain of bifunctional PutA protein ALDH-like 11
Succinyl-CoA synthetase domains Acyl-CoA N-acyltransferases (Nat) 11
Carbamate kinase-like ACT-like 11
Glycosyl hydrolase domain Protein kinase-like (PK-like) 11
Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), C-terminal domain 11
Chaperone J-domain HSC20 (HSCB), C-terminal oligomerisation domain 11
PurS-like PurM N-terminal domain-like 11
FGAM synthase PurL, linker domain Class I glutamine amidotransferase-like 11
Diaminopimelate epimerase-like Diaminopimelate epimerase-like 11
TK C-terminal domain-like Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 11
Cytochrome c Quinohemoprotein amine dehydrogenase A chain, domain 3 11
LysM domain Duplicated hybrid motif 11
Nucleic acid-binding proteins Prim-pol domain 11
Nucleotide-diphospho-sugar transferases UDP-Glycosyltransferase/glycogen phosphorylase 11
Methylglyoxal synthase-like Cytidine deaminase-like 11
Translation proteins Initiation factor IF2/eIF5b, domain 3 11
Nucleic acid-binding proteins PheT/TilS domain 11
MgtE N-terminal domain-like MgtE membrane domain-like 11
Putative DNA-binding domain Initiation factor IF2/eIF5b, domain 3 11
Nucleotide-diphospho-sugar transferases RmlC-like cupins 11
Glycerol-3-phosphate (1)-acyltransferase Acetyl-CoA synthetase-like 11
Sensory domain-like Sensory domain-like 11
Actin-like ATPase domain HD-domain/PDEase-like 11
Homeodomain-like Methylated DNA-protein cysteine methyltransferase domain 11
"Winged helix" DNA-binding domain NagB/RpiA/CoA transferase-like 11
Acyl-CoA N-acyltransferases (Nat) Acyl-CoA N-acyltransferases (Nat) 11
PreATP-grasp domain PreATP-grasp domain 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleic acid-binding proteins 11
Sensory domain-like Nucleotide cyclase 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
Transcription factor NusA, N-terminal domain Rad51 N-terminal domain-like 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Nucleic acid-binding proteins 11
CheY-like TPR-like 11
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 11
Glutamyl tRNA-reductase catalytic, N-terminal domain Glutamyl tRNA-reductase dimerization domain 11
Homocysteine S-methyltransferase Cobalamin (vitamin B12)-binding domain 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 11
Heme-dependent peroxidases Heme-dependent peroxidases 11
P-loop containing nucleoside triphosphate hydrolases HRDC-like 11
Nucleotidyltransferase substrate binding subunit/domain Nucleotidyltransferase substrate binding subunit/domain 11
SufE/NifU Fe-S cluster assembly (FSCA) domain-like 11
Periplasmic binding protein-like II Lysozyme-like 11
PUA domain-like Ribosomal protein S5 domain 2-like 11
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
ParB/Sulfiredoxin KorB DNA-binding domain-like 11
beta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like 11
beta-lactamase/transpeptidase-like Penicillin-binding protein associated domain 11
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 11
DNA primase core DNA primase DnaG, C-terminal domain 11
Ribosomal protein S5 domain 2-like HSP90 C-terminal domain 11
FMN-binding split barrel UbiD C-terminal domain-like 11
Rho N-terminal domain-like Nucleic acid-binding proteins 11
TGS-like Class II aaRS ABD-related 11
Aconitase B, N-terminal domain Aconitase iron-sulfur domain 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
PLP-dependent transferases PLP-dependent transferases 11
CarD-like TRCF domain-like 11
Putative DNA-binding domain P-loop containing nucleoside triphosphate hydrolases 11
Barwin-like endoglucanases Sporulation related repeat 11
Formate/glycerate dehydrogenase catalytic domain-like ACT-like 11
Nucleotidylyl transferase tRNA-binding arm 11
PurS-like FGAM synthase PurL, linker domain 11
Nucleic acid-binding proteins ArfGap/RecO-like zinc finger 11
HlyD-like secretion proteins HlyD-like secretion proteins 11
Single hybrid motif Single hybrid motif 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
Sm-like ribonucleoproteins Mechanosensitive channel protein MscS (YggB), C-terminal domain 11
Regulatory protein AraC Homeodomain-like 11
TrmE connector domain P-loop containing nucleoside triphosphate hydrolases 11
Cytochrome c E set domains 11
Sensory domain-like HD-domain/PDEase-like 11
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 11
Tetrapyrrole methylase S-adenosyl-L-methionine-dependent methyltransferases 11
Nucleotidyltransferase substrate binding subunit/domain HD-domain/PDEase-like 11
DNA topoisomerase I domain DNA breaking-rejoining enzymes 11
Nucleotide-binding domain Nucleotide-binding domain 11
RuvA domain 2-like BRCT domain 11
Hsp33 domain HSP33 redox switch-like 11
Voltage-gated potassium channels TrkA C-terminal domain-like 11
Chorismate mutase II ACT-like 11
Thioesterase/thiol ester dehydrase-isomerase Isocitrate/Isopropylmalate dehydrogenase-like 11
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 11
PreATP-grasp domain Methylglyoxal synthase-like 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
TPR-like S-adenosyl-L-methionine-dependent methyltransferases 11
PPK N-terminal domain-like Phospholipase D/nuclease 11
Arginase/deacetylase PLP-dependent transferases 11
Periplasmic binding protein-like II Homodimeric domain of signal transducing histidine kinase 11
Galactose-binding domain-like Galactose-binding domain-like 11
PurM N-terminal domain-like Class I glutamine amidotransferase-like 11
FGAM synthase PurL, linker domain PurM C-terminal domain-like 11
PIN domain-like DNA/RNA polymerases 11
Transcription factor NusA, N-terminal domain Prokaryotic type KH domain (KH-domain type II) 11
Pseudouridine synthase PUA domain-like 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
5' to 3' exonuclease, C-terminal subdomain Ribonuclease H-like 11
Eukaryotic type KH-domain (KH-domain type I) Nucleic acid-binding proteins 11
Methylated DNA-protein cysteine methyltransferase domain Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
Thioredoxin-like Thioredoxin-like 11
NAD(P)-binding Rossmann-fold domains Glutamyl tRNA-reductase dimerization domain 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases 11
Glutathione synthetase ATP-binding domain-like Acyl-CoA N-acyltransferases (Nat) 11
Tex N-terminal region-like Nucleic acid-binding proteins 11
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 11
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 11
DNA ligase/mRNA capping enzyme, catalytic domain RuvA domain 2-like 11
Class II aaRS and biotin synthetases Translation proteins 11
TGS-like Class II aaRS and biotin synthetases 11
Ribonuclease H-like RuvA domain 2-like 11
Nucleotidyltransferase Nucleotidyltransferase 11
PGBD-like L,D-transpeptidase catalytic domain-like 11
P-loop containing nucleoside triphosphate hydrolases TrpR-like 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain ACT-like 11
PPK N-terminal domain-like PHP14-like 11
Cryptochrome/photolyase, N-terminal domain Cryptochrome/photolyase FAD-binding domain 11
Fe-S cluster assembly (FSCA) domain-like P-loop containing nucleoside triphosphate hydrolases 11
Nitrous oxide reductase, N-terminal domain Cupredoxins 11
Cupredoxins Cytochrome c 11
Methionine synthase domain Methionine synthase activation domain-like 11
2Fe-2S ferredoxin-like FAD-binding/transporter-associated domain-like 11
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 11
4Fe-4S ferredoxins Ferredoxin reductase-like, C-terminal NADP-linked domain 11
Multiheme cytochromes Cytochrome c 11
Aspartate/glutamate racemase Aspartate/glutamate racemase 11
Periplasmic binding protein-like II ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Cytochrome c oxidase subunit II-like, transmembrane region Cytochrome c 11
P-loop containing nucleoside triphosphate hydrolases Smc hinge domain 11
CO dehydrogenase ISP C-domain like FAD-binding/transporter-associated domain-like 11
Ferritin-like HAD-like 11
N-terminal domain of MutM-like DNA repair proteins Glucocorticoid receptor-like (DNA-binding domain) 11
Putative DNA-binding domain Anticodon-binding domain of PheRS 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase HSP90 C-terminal domain 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 11
PurM C-terminal domain-like Class I glutamine amidotransferase-like 11
Rhodanese/Cell cycle control phosphatase Ankyrin repeat 11
Class II aaRS and biotin synthetases GAD domain-like 11
FAD/NAD(P)-binding domain Nitrite/Sulfite reductase N-terminal domain-like 11
lambda integrase-like, N-terminal domain DNA breaking-rejoining enzymes 11
EPT/RTPC-like P-loop containing nucleoside triphosphate hydrolases 11
Ribosomal protein L6 Ribosomal protein L6 11
YgfB-like Sec-C motif 11
Lysozyme-like LysM domain 11
PRTase-like PRTase-like 11
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Ferritin-like Calcium ATPase, transduction domain A 11
Homeodomain-like Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
Glutathione synthetase ATP-binding domain-like HAD-like 11
(Trans)glycosidases Protein kinase-like (PK-like) 11
S-adenosyl-L-methionine-dependent methyltransferases S-adenosyl-L-methionine-dependent methyltransferases 11
NagB/RpiA/CoA transferase-like alpha-helical ferredoxin 11
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
RuvA domain 2-like RuvA domain 2-like 11
Ribbon-helix-helix ACT-like 11
Ribonuclease H-like DNA/RNA polymerases 11
Homocysteine S-methyltransferase Dihydropteroate synthetase-like 11
PEP carboxykinase N-terminal domain PEP carboxykinase-like 11
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 11
Nucleic acid-binding proteins NAD(P)-binding Rossmann-fold domains 11
DsbC/DsbG N-terminal domain-like Thioredoxin-like 11
TPR-like NTF2-like 11
Heme-dependent catalase-like Class I glutamine amidotransferase-like 11
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 11
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 11
HD-domain/PDEase-like Nucleotide cyclase 11
Nucleotidyltransferase substrate binding subunit/domain ACT-like 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
P-loop containing nucleoside triphosphate hydrolases TGS-like 11
YjeF N-terminal domain-like Ribokinase-like 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
Ferritin-like Calcium ATPase, transmembrane domain M 11
FAD-binding/transporter-associated domain-like Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain 11
Cadherin-like Cadherin-like 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
Nucleic acid-binding proteins Putative DNA-binding domain 11
FMN-linked oxidoreductases Alpha subunit of glutamate synthase, C-terminal domain 11
Metal cation-transporting ATPase, ATP-binding domain N Calcium ATPase, transmembrane domain M 11
Transcription factor NusA, N-terminal domain Nucleic acid-binding proteins 11
ABC transporter transmembrane region CheY-like 11
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 11
Translation proteins PRC-barrel domain 11
lambda repressor-like DNA-binding domains RmlC-like cupins 11
Single hybrid motif FAD/NAD(P)-binding domain 11
Radical SAM enzymes Nitrogenase accessory factor-like 11
NAD(P)-binding Rossmann-fold domains Glutathione synthetase ATP-binding domain-like 11
Methionine synthase domain Cobalamin (vitamin B12)-binding domain 11
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 11
NAD(P)-binding Rossmann-fold domains Acyl-CoA N-acyltransferases (Nat) 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
Aldehyde ferredoxin oxidoreductase, N-terminal domain Aldehyde ferredoxin oxidoreductase, C-terminal domains 11
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 11
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 11
Aconitase B, N-terminal domain LeuD/IlvD-like 11
N-terminal domain of bifunctional PutA protein FAD-linked oxidoreductase 11
cAMP-binding domain-like CBS-domain pair 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleotidylyl transferase 11
Trigger factor ribosome-binding domain FKBP-like 11
Globin-like Nucleotide cyclase 11
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 11
"Winged helix" DNA-binding domain S-adenosyl-L-methionine-dependent methyltransferases 11
YbaK/ProRS associated domain Class II aaRS ABD-related 11
Sensory domain-like GAF domain-like 11
PH0987 N-terminal domain-like Cyclophilin-like 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
2Fe-2S ferredoxin-like alpha-helical ferredoxin 11
PLP-dependent transferases Ornithine decarboxylase C-terminal domain 11
S13-like H2TH domain Glucocorticoid receptor-like (DNA-binding domain) 11
DNA methylase specificity domain DNA methylase specificity domain 11
Quinohemoprotein amine dehydrogenase A chain, domain 3 E set domains 11
GIY-YIG endonuclease C-terminal UvrC-binding domain of UvrB 11
Nudix Thiamin phosphate synthase 11
CBS-domain pair MgtE membrane domain-like 11
SpoIIaa-like SpoIIaa-like 11
Translation proteins ThrRS/AlaRS common domain 11
TGS-like ThrRS/AlaRS common domain 11
Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Alpha subunit of glutamate synthase, C-terminal domain 11
Protein kinase-like (PK-like) HD-domain/PDEase-like 11
CheC-like Surface presentation of antigens (SPOA) 11
Toll/Interleukin receptor TIR domain LCCL domain 11
Nucleotidylyl transferase Ribosomal protein L25-like 11
Urease metallochaperone UreE, N-terminal domain Urease metallochaperone UreE, C-terminal domain 11
Homocysteine S-methyltransferase Methionine synthase activation domain-like 11
Nucleotidylyl transferase YegP-like 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
Nucleic acid-binding proteins S-adenosyl-L-methionine-dependent methyltransferases 11
Tex N-terminal region-like RuvA domain 2-like 11
FKBP-like FKBP-like 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphohistidine domain 11
Nucleic acid-binding proteins Prokaryotic type KH domain (KH-domain type II) 11
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 11
SMAD/FHA domain SMAD/FHA domain 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
Adenine nucleotide alpha hydrolases-like Adenine nucleotide alpha hydrolases-like 11
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 11
Soluble quinoprotein glucose dehydrogenase Calcium-dependent phosphotriesterase 11
PK beta-barrel domain-like PK C-terminal domain-like 11
DNA clamp DNA clamp 11
Epsilon subunit of F1F0-ATP synthase N-terminal domain Epsilon subunit of F1F0-ATP synthase C-terminal domain 11
LCCL domain LCCL domain 11
Zinc beta-ribbon DNA primase DnaG, C-terminal domain 11
PUA domain-like S-adenosyl-L-methionine-dependent methyltransferases 11
DNA-glycosylase Nudix 11
Carbon-nitrogen hydrolase Adenine nucleotide alpha hydrolases-like 11
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 11
E set domains E set domains 11
FAD/NAD(P)-binding domain FMN-linked oxidoreductases 11
NagB/RpiA/CoA transferase-like D-ribose-5-phosphate isomerase (RpiA), lid domain 11
YajQ-like YajQ-like 11
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 11
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 11
Metalloproteases ("zincins"), catalytic domain PDZ domain-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
Dihydropteroate synthetase-like Methionine synthase domain 11
FMN-dependent nitroreductase-like FMN-dependent nitroreductase-like 11
PIN domain-like P-loop containing nucleoside triphosphate hydrolases 11
GAF domain-like EspE N-terminal domain-like 11
Class II aaRS and biotin synthetases YbaK/ProRS associated domain 11
PYP-like sensor domain (PAS domain) Homeodomain-like 11
PYP-like sensor domain (PAS domain) P-loop containing nucleoside triphosphate hydrolases 11
RNase III domain-like dsRNA-binding domain-like 11
Protein kinase-like (PK-like) Sensory domain-like 11
ABC transporter transmembrane region ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Pectin lyase-like Autotransporter 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
Bacterial muramidases Lysozyme-like 11
Zinc beta-ribbon DNA primase core 11
Transmembrane di-heme cytochromes a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 11
Sensory domain-like Methyl-accepting chemotaxis protein (MCP) signaling domain 11
Nucleic acid-binding proteins Rad51 N-terminal domain-like 11
ACT-like Formyltransferase 11
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 11
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 11
GIY-YIG endonuclease RuvA domain 2-like 11
YhbC-like, N-terminal domain YhbC-like, C-terminal domain 11
MesJ substrate recognition domain-like PheT/TilS domain 11
Nucleic acid-binding proteins BRCT domain 11
Nitrite/Sulfite reductase N-terminal domain-like Nitrite/Sulfite reductase N-terminal domain-like 11
PUA domain-like alpha/beta knot 11
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
Nucleotidylyl transferase Phosphoenolpyruvate/pyruvate domain 11
2Fe-2S ferredoxin-like CO dehydrogenase flavoprotein C-terminal domain-like 11
Prokaryotic type KH domain (KH-domain type II) Rad51 N-terminal domain-like 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
Putative DNA-binding domain Cobalamin (vitamin B12)-binding domain 11
Single hybrid motif FAD/NAD-linked reductases, dimerisation (C-terminal) domain 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
ADC synthase D-aminoacid aminotransferase-like PLP-dependent enzymes 11
L9 N-domain-like Ribosomal protein L9 C-domain 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 11
P-loop containing nucleoside triphosphate hydrolases Cobalamin (vitamin B12)-dependent enzymes 11
MgtE N-terminal domain-like CBS-domain pair 11
PHP14-like Phospholipase D/nuclease 11
C-terminal UvrC-binding domain of UvrB RuvA domain 2-like 11
HMA, heavy metal-associated domain HMA, heavy metal-associated domain 11
Translation proteins Translation proteins 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 11
P-loop containing nucleoside triphosphate hydrolases C-terminal UvrC-binding domain of UvrB 11
"Winged helix" DNA-binding domain MOP-like 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 11
TolB, N-terminal domain Tricorn protease N-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 11
Nucleotidylyl transferase Nucleic acid-binding proteins 11
Carbamate kinase-like Acyl-CoA N-acyltransferases (Nat) 11
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 11
Calcium ATPase, transduction domain A Metal cation-transporting ATPase, ATP-binding domain N 11
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 11
Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha) Thioredoxin-like 11
Metallo-dependent phosphatases 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain 11
Putative DNA-binding domain Translation proteins 11

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