SUPERFAMILY 1.75 HMM library and genome assignments server

Domain combination pairs in Syntrophobacter fumaroxidans MPOB

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

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Adjacent domain pairs graph

Graph of adjacent domain pairs.


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Domain combination pairs

705 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 6029
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 5030
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 4222
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 286
PYP-like sensor domain (PAS domain) PYP-like sensor domain (PAS domain) 2420
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheY-like 2214
PYP-like sensor domain (PAS domain) CheY-like 2012
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 2012
Homodimeric domain of signal transducing histidine kinase CheY-like 2012
CheY-like P-loop containing nucleoside triphosphate hydrolases 193
CheY-like Homeodomain-like 171
FAD/NAD(P)-binding domain 4Fe-4S ferredoxins 1611
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 156
Formate dehydrogenase/DMSO reductase, domains 1-3 ADC-like 152
Actin-like ATPase domain Actin-like ATPase domain 146
HAMP domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 138
Adenine nucleotide alpha hydrolases-like Adenine nucleotide alpha hydrolases-like 121
HAMP domain-like Homodimeric domain of signal transducing histidine kinase 127
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 126
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 124
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 113
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 115
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB transmembrane domain 105
Homeodomain-like Tetracyclin repressor-like, C-terminal domain 102
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 105
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB transmembrane domain 105
P-loop containing nucleoside triphosphate hydrolases Translation proteins 106
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 103
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 105
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 106
ACT-like ACT-like 94
HAMP domain-like PYP-like sensor domain (PAS domain) 96
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 93
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 94
TPR-like TPR-like 96
Composite domain of metallo-dependent hydrolases Metallo-dependent hydrolases 85
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein S5 domain 2-like 85
Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase C-terminal domain-like 82
PYP-like sensor domain (PAS domain) Homeodomain-like 84
PYP-like sensor domain (PAS domain) P-loop containing nucleoside triphosphate hydrolases 84
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 77
Nucleotide-binding domain 4Fe-4S ferredoxins 77
NagB/RpiA/CoA transferase-like NagB/RpiA/CoA transferase-like 72
GroES-like NAD(P)-binding Rossmann-fold domains 72
CheY-like C-terminal effector domain of the bipartite response regulators 71
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 74
2Fe-2S ferredoxin-like 4Fe-4S ferredoxins 74
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 62
Thiolase-like Thiolase-like 61
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 64
Translation proteins EF-G C-terminal domain-like 63
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 61
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 63
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 63
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 63
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 63
"Winged helix" DNA-binding domain GntR ligand-binding domain-like 51
Nucleotide-binding domain FAD/NAD(P)-binding domain 55
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 54
PurM N-terminal domain-like PurM C-terminal domain-like 52
GAF domain-like PYP-like sensor domain (PAS domain) 55
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 52
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 52
2Fe-2S ferredoxin-like Formate dehydrogenase/DMSO reductase, domains 1-3 52
GAF domain-like Homodimeric domain of signal transducing histidine kinase 55
alpha-helical ferredoxin FAD/NAD(P)-binding domain 55
E set domains (Trans)glycosidases 54
GAF domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 55
4Fe-4S ferredoxins Formate dehydrogenase/DMSO reductase, domains 1-3 52
Nucleotide-binding domain alpha-helical ferredoxin 55
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 53
EF-G C-terminal domain-like EF-G C-terminal domain-like 52
2Fe-2S ferredoxin-like CO dehydrogenase ISP C-domain like 42
(Trans)glycosidases Glycosyl hydrolase domain 43
Calcium ATPase, transmembrane domain M HAD-like 44
Nqo1 middle domain-like Nqo1C-terminal domain-like 43
GAF domain-like Homeodomain-like 42
Aldehyde ferredoxin oxidoreductase, N-terminal domain Aldehyde ferredoxin oxidoreductase, C-terminal domains 41
E set domains Glycosyl hydrolase domain 43
Triger factor/SurA peptide-binding domain-like FKBP-like 44
Chaperone J-domain HSP40/DnaJ peptide-binding domain 44
Nqo1 FMN-binding domain-like Nqo1C-terminal domain-like 43
GAF domain-like Nucleotide cyclase 44
GAF domain-like P-loop containing nucleoside triphosphate hydrolases 42
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 42
Glutathione synthetase ATP-binding domain-like Succinyl-CoA synthetase domains 42
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 42
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 44
Nqo1 FMN-binding domain-like Nqo1 middle domain-like 43
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 41
Sensory domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 44
Calcium ATPase, transduction domain A HAD-like 44
HAMP domain-like CheY-like 44
2Fe-2S ferredoxin-like alpha-helical ferredoxin 42
GAF domain-like HD-domain/PDEase-like 43
CheY-like GAF domain-like 43
NAD(P)-binding Rossmann-fold domains TrkA C-terminal domain-like 43
Adenine nucleotide alpha hydrolases-like DHS-like NAD/FAD-binding domain 42
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 44
alpha-helical ferredoxin 4Fe-4S ferredoxins 44
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 44
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 33
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 32
Sensory domain-like PYP-like sensor domain (PAS domain) 33
Class II aaRS and biotin synthetases Class II aaRS ABD-related 33
Trypsin-like serine proteases PDZ domain-like 33
NAD(P)-binding Rossmann-fold domains Glutathione synthetase ATP-binding domain-like 31
Succinyl-CoA synthetase domains Succinyl-CoA synthetase domains 31
alpha-helical ferredoxin alpha-helical ferredoxin 33
MurCD N-terminal domain MurD-like peptide ligases, peptide-binding domain 31
Nucleic acid-binding proteins RuvA domain 2-like 33
4Fe-4S ferredoxins ADC-like 31
MoeA N-terminal region -like MoeA C-terminal domain-like 32
lambda repressor-like DNA-binding domains RmlC-like cupins 32
Voltage-gated potassium channels TrkA C-terminal domain-like 32
DnaK suppressor protein DksA, alpha-hairpin domain Glucocorticoid receptor-like (DNA-binding domain) 32
Sensory domain-like Homodimeric domain of signal transducing histidine kinase 33
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 33
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 31
CBS-domain pair ACT-like 31
TPR-like Protein kinase-like (PK-like) 32
Thioredoxin-like Nqo1C-terminal domain-like 32
4Fe-4S ferredoxins Fe-only hydrogenase 33
NAD(P)-binding Rossmann-fold domains ACT-like 32
MoeA N-terminal region -like Molybdenum cofactor biosynthesis proteins 32
Molybdenum cofactor biosynthesis proteins MoeA C-terminal domain-like 32
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 32
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 31
Alpha-L RNA-binding motif Pseudouridine synthase 31
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 32
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 32
Translation proteins Ribosomal protein S5 domain 2-like 31
NHL repeat NHL repeat 32
Thioredoxin-like Nqo1 FMN-binding domain-like 32
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 32
PLP-binding barrel Alanine racemase C-terminal domain-like 32
EspE N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 31
Sm-like ribonucleoproteins Mechanosensitive channel protein MscS (YggB), C-terminal domain 32
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 31
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 32
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 32
CheY-like Nucleotide cyclase 33
HlyD-like secretion proteins HlyD-like secretion proteins 32
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 32
Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), C-terminal domain 32
Lysozyme-like beta-lactamase/transpeptidase-like 33
EF-G C-terminal domain-like Ribosomal protein S5 domain 2-like 31
GAF domain-like GAF domain-like 33
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 32
Thioredoxin-like Nqo1 middle domain-like 32
MurCD N-terminal domain MurD-like peptide ligases, catalytic domain 31
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 32
"Winged helix" DNA-binding domain Periplasmic binding protein-like II 31
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 32
NagB/RpiA/CoA transferase-like Acyl-CoA N-acyltransferases (Nat) 31
CheY-like HD-domain/PDEase-like 32
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 32
NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains 33
Voltage-gated potassium channels NAD(P)-binding Rossmann-fold domains 32
4Fe-4S ferredoxins 4Fe-4S ferredoxins 33
2Fe-2S ferredoxin-like ADC-like 31
Nucleotidyltransferase Poly A polymerase C-terminal region-like 33
Cobalamin (vitamin B12)-binding domain Radical SAM enzymes 33
CO dehydrogenase molybdoprotein N-domain-like Molybdenum cofactor-binding domain 32
Aspartate/glutamate racemase Aspartate/glutamate racemase 21
PK beta-barrel domain-like PK C-terminal domain-like 21
2Fe-2S ferredoxin-like Actin-like ATPase domain 21
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 21
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 22
Nucleotide-binding domain Nucleotide-binding domain 22
GroEL equatorial domain-like GroEL-intermediate domain like 21
Terpenoid cyclases/Protein prenyltransferases Terpenoid cyclases/Protein prenyltransferases 22
Nucleic acid-binding proteins Nucleic acid-binding proteins 22
GroEL-intermediate domain like GroEL apical domain-like 21
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 21
"Winged helix" DNA-binding domain LexA/Signal peptidase 21
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 22
Thioredoxin-like FAD/NAD(P)-binding domain 22
6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 22
Cytochrome c Cytochrome c 22
"Winged helix" DNA-binding domain Class II aaRS and biotin synthetases 21
FAD/NAD-linked reductases, dimerisation (C-terminal) domain Rhodanese/Cell cycle control phosphatase 22
Leukotriene A4 hydrolase N-terminal domain Metalloproteases ("zincins"), catalytic domain 21
Nucleotidyltransferase Nucleotidyltransferase substrate binding subunit/domain 22
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 22
FAD-binding/transporter-associated domain-like CO dehydrogenase flavoprotein C-terminal domain-like 21
Lysozyme-like LysM domain 22
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 22
Rhodanese/Cell cycle control phosphatase Rhodanese/Cell cycle control phosphatase 22
Class II aaRS and biotin synthetases C-terminal domain of transcriptional repressors 21
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 21
cAMP-binding domain-like "Winged helix" DNA-binding domain 21
Oligoxyloglucan reducing end-specific cellobiohydrolase Oligoxyloglucan reducing end-specific cellobiohydrolase 22
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 21
Phospholipase D/nuclease P-loop containing nucleoside triphosphate hydrolases 22
Sensory domain-like CheY-like 22
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 21
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 22
Nucleotide cyclase EAL domain-like 22
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 21
Penicillin binding protein dimerisation domain beta-lactamase/transpeptidase-like 22
HD-domain/PDEase-like ACT-like 22
4Fe-4S ferredoxins Nitrite and sulphite reductase 4Fe-4S domain-like 21
P-loop containing nucleoside triphosphate hydrolases TGS-like 21
P-loop containing nucleoside triphosphate hydrolases Hypothetical protein YjiA, C-terminal domain 22
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 21
PreATP-grasp domain PreATP-grasp domain 21
Periplasmic binding protein-like II OmpA-like 22
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 21
HD-domain/PDEase-like HD-domain/PDEase-like 22
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 21
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 21
HMA, heavy metal-associated domain HAD-like 22
"Winged helix" DNA-binding domain C-terminal domain of transcriptional repressors 21
PreATP-grasp domain Rudiment single hybrid motif 22
Formate/glycerate dehydrogenase catalytic domain-like ACT-like 21
Nucleotidyltransferase ACT-like 22
PDZ domain-like PDZ domain-like 22
GreA transcript cleavage protein, N-terminal domain FKBP-like 21
GroEL equatorial domain-like GroEL apical domain-like 21
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 21
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 21
Single hybrid motif CoA-dependent acyltransferases 21
Nucleic acid-binding proteins GAD domain-like 22
PYP-like sensor domain (PAS domain) Nucleotide cyclase 22
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 21
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
Ferritin-like Rubredoxin-like 21
NAD(P)-binding Rossmann-fold domains Serine metabolism enzymes domain 21
Single hybrid motif Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 21
FAD/NAD(P)-binding domain Rhodanese/Cell cycle control phosphatase 22
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 21
Serine metabolism enzymes domain ACT-like 21
"Winged helix" DNA-binding domain Iron-dependent repressor protein, dimerization domain 22
Aldolase post-HMGL domain-like 22
Glutamine synthetase/guanido kinase GatB/YqeY motif 21
TrkA C-terminal domain-like TrkA C-terminal domain-like 22
MetI-like MetI-like 21
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 21
CheY-like Methylesterase CheB, C-terminal domain 21
Initiation factor IF2/eIF5b, domain 3 Translation proteins 22
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 22
NAD(P)-binding Rossmann-fold domains UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 22
CheY-like CheY-like 22
PUA domain-like Ribosomal protein S5 domain 2-like 21
CBS-domain pair FAD-binding/transporter-associated domain-like 21
Translation proteins PRC-barrel domain 21
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 21
NAD(P)-binding Rossmann-fold domains Bet v1-like 21
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 21
Putative DNA-binding domain alpha-helical ferredoxin 21
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
Zinc beta-ribbon DNA primase core 21
S-adenosyl-L-methionine-dependent methyltransferases MFS general substrate transporter 22
P-loop containing nucleoside triphosphate hydrolases MOP-like 21
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 21
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 22
Formate/glycerate dehydrogenase catalytic domain-like Serine metabolism enzymes domain 21
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
Nucleotidyltransferase TGS-like 22
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 21
Nitrite/Sulfite reductase N-terminal domain-like 4Fe-4S ferredoxins 21
4Fe-4S ferredoxins P-loop containing nucleoside triphosphate hydrolases 21
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 22
HD-domain/PDEase-like Nucleotidyltransferase 22
Class II aaRS and biotin synthetases ThrRS/AlaRS common domain 22
HD-domain/PDEase-like TGS-like 22
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex CoA-dependent acyltransferases 21
tRNA-binding arm Class II aaRS and biotin synthetases 21
FMN-linked oxidoreductases FAD/NAD(P)-binding domain 21
Nucleic acid-binding proteins Translation proteins SH3-like domain 22
CheY-like EAL domain-like 22
Periplasmic binding protein-like II ACT-like 22
Class II aaRS and biotin synthetases GAD domain-like 22
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 22
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 21
SMAD/FHA domain GAF domain-like 22
PreATP-grasp domain Methylglyoxal synthase-like 21
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 11
Nucleic acid-binding proteins Glu-tRNAGln amidotransferase C subunit 11
PYP-like sensor domain (PAS domain) Sporulation response regulatory protein Spo0B 11
ClpP/crotonase 6-phosphogluconate dehydrogenase C-terminal domain-like 11
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 11
Nucleic acid-binding proteins Putative DNA-binding domain 11
P-loop containing nucleoside triphosphate hydrolases C-terminal UvrC-binding domain of UvrB 11
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 11
ClpP/crotonase NAD(P)-binding Rossmann-fold domains 11
Zinc beta-ribbon Zinc beta-ribbon 11
4Fe-4S ferredoxins PYP-like sensor domain (PAS domain) 11
4Fe-4S ferredoxins DHS-like NAD/FAD-binding domain 11
FKBP-like FKBP-like 11
Sialidases Oligoxyloglucan reducing end-specific cellobiohydrolase 11
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 11
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 11
Nucleic acid-binding proteins BRCT domain 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
CBS-domain pair CBS-domain pair 11
RuvA domain 2-like MCP/YpsA-like 11
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 11
Tryptophan synthase beta subunit-like PLP-dependent enzymes Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
Periplasmic binding protein-like II GlnB-like 11
MesJ substrate recognition domain-like PheT/TilS domain 11
Multiheme cytochromes Cytochrome c 11
UbiD C-terminal domain-like UbiD C-terminal domain-like 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
Putative DNA-binding domain Anticodon-binding domain of PheRS 11
YhbC-like, N-terminal domain YhbC-like, C-terminal domain 11
Staphylococcal nuclease Ada DNA repair protein, N-terminal domain (N-Ada 10) 11
CheY-like Nucleotide-binding domain 11
P-loop containing nucleoside triphosphate hydrolases RmlC-like cupins 11
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 11
NTF2-like Ankyrin repeat 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
DNA-glycosylase Nudix 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 11
Eukaryotic type KH-domain (KH-domain type I) Nucleic acid-binding proteins 11
Carbon-nitrogen hydrolase Adenine nucleotide alpha hydrolases-like 11
HIT-like P-loop containing nucleoside triphosphate hydrolases 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
"Winged helix" DNA-binding domain S-adenosyl-L-methionine-dependent methyltransferases 11
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 11
Aldolase ACT-like 11
DHH phosphoesterases Poly A polymerase C-terminal region-like 11
NagB/RpiA/CoA transferase-like alpha-helical ferredoxin 11
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 11
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 11
CO dehydrogenase ISP C-domain like CO dehydrogenase molybdoprotein N-domain-like 11
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 11
Aldolase Single hybrid motif 11
P-loop containing nucleoside triphosphate hydrolases TrpR-like 11
Subtilisin-like Carbohydrate-binding domain 11
Integrin alpha N-terminal domain CalX-like 11
Eukaryotic type KH-domain (KH-domain type I) HD-domain/PDEase-like 11
Thioredoxin-like Six-hairpin glycosidases 11
Nucleic acid-binding proteins S-adenosyl-L-methionine-dependent methyltransferases 11
Carbohydrate-binding domain Integrin alpha N-terminal domain 11
RuvA domain 2-like P-loop containing nucleoside triphosphate hydrolases 11
WD40 repeat-like Quinoprotein alcohol dehydrogenase-like 11
EreA/ChaN-like PDZ domain-like 11
DNA ligase/mRNA capping enzyme, catalytic domain RuvA domain 2-like 11
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 11
Cupredoxins Cupredoxins 11
Adenine nucleotide alpha hydrolases-like MesJ substrate recognition domain-like 11
Nucleotide-diphospho-sugar transferases HD-domain/PDEase-like 11
NAD(P)-binding Rossmann-fold domains Siroheme synthase middle domains-like 11
Clc chloride channel CBS-domain pair 11
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 11
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 11
CarD-like TRCF domain-like 11
Formyltransferase FMT C-terminal domain-like 11
4Fe-4S ferredoxins FMN-linked oxidoreductases 11
PUA domain-like alpha/beta knot 11
HAMP domain-like GAF domain-like 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
"Winged helix" DNA-binding domain GAF domain-like 11
Aminoacid dehydrogenase-like, N-terminal domain Isocitrate/Isopropylmalate dehydrogenase-like 11
Alpha-L RNA-binding motif S-adenosyl-L-methionine-dependent methyltransferases 11
Nqo1 FMN-binding domain-like alpha-helical ferredoxin 11
Aldolase Periplasmic binding protein-like II 11
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 11
Thioredoxin-like 4Fe-4S ferredoxins 11
YVTN repeat-like/Quinoprotein amine dehydrogenase Pectin lyase-like 11
Nitrous oxide reductase, N-terminal domain Cytochrome c 11
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
RuvA domain 2-like BRCT domain 11
Nucleotide-diphospho-sugar transferases Phosphoglycerate mutase-like 11
Nucleic acid-binding proteins DNA helicase RuvA subunit, C-terminal domain 11
Methylated DNA-protein cysteine methyltransferase domain Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
Nucleotidylyl transferase tRNA-binding arm 11
Class II aaRS and biotin synthetases Glu-tRNAGln amidotransferase C subunit 11
Aconitase iron-sulfur domain LeuD/IlvD-like 11
HIT-like HIT-like 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
E set domains Carbohydrate-binding domain 11
CBS-domain pair Poly A polymerase C-terminal region-like 11
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Eukaryotic type KH-domain (KH-domain type I) 11
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 11
Fe-only hydrogenase PYP-like sensor domain (PAS domain) 11
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 11
ClpP/crotonase NfeD domain-like 11
Sporulation response regulatory protein Spo0B ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 11
Calcium-dependent phosphotriesterase Calcium-dependent phosphotriesterase 11
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 11
HprK N-terminal domain-like Isocitrate/Isopropylmalate dehydrogenase-like 11
SMAD/FHA domain SMAD/FHA domain 11
ParB/Sulfiredoxin KorB DNA-binding domain-like 11
lambda repressor-like DNA-binding domains LexA/Signal peptidase 11
Epsilon subunit of F1F0-ATP synthase N-terminal domain Epsilon subunit of F1F0-ATP synthase C-terminal domain 11
ARM repeat ARM repeat 11
Barwin-like endoglucanases Sporulation related repeat 11
DNA clamp DNA clamp 11
beta-lactamase/transpeptidase-like Penicillin-binding protein associated domain 11
Ribosomal protein L6 Ribosomal protein L6 11
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 11
RuvA domain 2-like DNA helicase RuvA subunit, C-terminal domain 11
Translation proteins ThrRS/AlaRS common domain 11
Cryptochrome/photolyase, N-terminal domain Cryptochrome/photolyase FAD-binding domain 11
HydA/Nqo6-like HydB/Nqo4-like 11
UDP-Glycosyltransferase/glycogen phosphorylase ARM repeat 11
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 11
DHH phosphoesterases Nucleotidyltransferase 11
Dimeric alpha+beta barrel NTF2-like 11
Acyl-CoA N-acyltransferases (Nat) P-loop containing nucleoside triphosphate hydrolases 11
EPT/RTPC-like RNA 3'-terminal phosphate cyclase, RPTC, insert domain 11
TPR-like ARM repeat 11
Aminopeptidase/glucanase lid domain Zn-dependent exopeptidases 11
NagB/RpiA/CoA transferase-like 4Fe-4S ferredoxins 11
Calcium-dependent phosphotriesterase Quinoprotein alcohol dehydrogenase-like 11
Rho N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
L30e-like alpha/beta knot 11
TPR-like P-loop containing nucleoside triphosphate hydrolases 11
GAF domain-like PP2C-like 11
Glutamyl tRNA-reductase catalytic, N-terminal domain NAD(P)-binding Rossmann-fold domains 11
Nqo1 middle domain-like 4Fe-4S ferredoxins 11
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
Terpenoid cyclases/Protein prenyltransferases Six-hairpin glycosidases 11
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 11
CO dehydrogenase ISP C-domain like Molybdenum cofactor-binding domain 11
4Fe-4S ferredoxins FMN-dependent nitroreductase-like 11
Alpha subunit of glutamate synthase, C-terminal domain 4Fe-4S ferredoxins 11
Phospholipase D/nuclease Phospholipase D/nuclease 11
Alkaline phosphatase-like P-loop containing nucleoside triphosphate hydrolases 11
Adenine nucleotide alpha hydrolases-like FAD/NAD(P)-binding domain 11
E set domains Type I dockerin domain 11
Histidine-containing phosphotransfer domain, HPT domain Homodimeric domain of signal transducing histidine kinase 11
UDP-Glycosyltransferase/glycogen phosphorylase RmlC-like cupins 11
UDP-Glycosyltransferase/glycogen phosphorylase SMR domain-like 11
Nucleic acid-binding proteins Prokaryotic type KH domain (KH-domain type II) 11
HlyD-like secretion proteins Ferritin-like 11
YrdC/RibB Actin-like ATPase domain 11
Tex N-terminal region-like RuvA domain 2-like 11
Ribonuclease H-like RuvA domain 2-like 11
Transcription factor NusA, N-terminal domain Rad51 N-terminal domain-like 11
(Trans)glycosidases Nucleotide-diphospho-sugar transferases 11
Caspase-like C-type lectin-like 11
Trigger factor ribosome-binding domain FKBP-like 11
Class I glutamine amidotransferase-like LD-carboxypeptidase A C-terminal domain-like 11
L9 N-domain-like Ribosomal protein L9 C-domain 11
TTHA1013/TTHA0281-like Ribbon-helix-helix 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
Sensory domain-like HAMP domain-like 11
Metallo-dependent phosphatases 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain 11
Fibronectin type III Fibronectin type III 11
ClpP/crotonase ClpP/crotonase 11
Carbohydrate-binding domain Type I dockerin domain 11
YjeF N-terminal domain-like Ribokinase-like 11
P-loop containing nucleoside triphosphate hydrolases CarD-like 11
Acylphosphatase/BLUF domain-like YrdC/RibB 11
Protein kinase-like (PK-like) P-loop containing nucleoside triphosphate hydrolases 11
Ferritin-like Ferritin-like 11
FAD-binding/transporter-associated domain-like Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain 11
Homo-oligomeric flavin-containing Cys decarboxylases, HFCD CoaB-like 11
PHP domain-like UDP-Glycosyltransferase/glycogen phosphorylase 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 11
Periplasmic binding protein-like II Voltage-gated potassium channels 11
Nucleic acid-binding proteins PheT/TilS domain 11
Nucleic acid-binding proteins Rad51 N-terminal domain-like 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
Nucleic acid-binding proteins HD-domain/PDEase-like 11
PH0987 N-terminal domain-like Cyclophilin-like 11
Pectin lyase-like CalX-like 11
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 11
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 11
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 11
S-adenosyl-L-methionine-dependent methyltransferases Nucleotide-diphospho-sugar transferases 11
C-terminal UvrC-binding domain of UvrB RuvA domain 2-like 11
Nucleotide cyclase TPR-like 11
HydA/Nqo6-like Nqo5-like 11
Prokaryotic type KH domain (KH-domain type II) Rad51 N-terminal domain-like 11
FMN-binding split barrel UbiD C-terminal domain-like 11
EPT/RTPC-like EPT/RTPC-like 11
HD-domain/PDEase-like Phosphoglycerate mutase-like 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
cAMP-binding domain-like cAMP-binding domain-like 11
NAD(P)-binding Rossmann-fold domains Glutamyl tRNA-reductase dimerization domain 11
SufE/NifU Fe-S cluster assembly (FSCA) domain-like 11
PGBD-like L,D-transpeptidase catalytic domain-like 11
TPR-like Sporulation related repeat 11
Acylphosphatase/BLUF domain-like Actin-like ATPase domain 11
Ribonuclease H-like Nucleic acid-binding proteins 11
Nucleotidylyl transferase Riboflavin kinase-like 11
Molybdenum cofactor biosynthesis proteins Periplasmic binding protein-like II 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
SMAD/FHA domain Nucleotide cyclase 11
Nucleotidyltransferase substrate binding subunit/domain ACT-like 11
FwdE-like Molybdenum cofactor biosynthesis proteins 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
S-adenosyl-L-methionine-dependent methyltransferases alpha/beta knot 11
P-loop containing nucleoside triphosphate hydrolases Restriction endonuclease-like 11
N-terminal domain of DnaB helicase P-loop containing nucleoside triphosphate hydrolases 11
Subtilisin-like Type I dockerin domain 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
Translation proteins "Winged helix" DNA-binding domain 11
Metal cation-transporting ATPase, ATP-binding domain N Calcium ATPase, transmembrane domain M 11
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 11
post-HMGL domain-like Single hybrid motif 11
Nucleic acid-binding proteins ArfGap/RecO-like zinc finger 11
2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain Alkaline phosphatase-like 11
LigB-like AMMECR1-like 11
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 11
YbaK/ProRS associated domain Class II aaRS ABD-related 11
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 11
Hedgehog/DD-peptidase LysM domain 11
Sec-C motif TPR-like 11
Transcription factor NusA, N-terminal domain Prokaryotic type KH domain (KH-domain type II) 11
PEP carboxykinase N-terminal domain PEP carboxykinase-like 11
Histidine-containing phosphotransfer domain, HPT domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
GIY-YIG endonuclease RuvA domain 2-like 11
alpha-helical ferredoxin CheY-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Adenine nucleotide alpha hydrolases-like 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphohistidine domain 11
PUA domain-like S-adenosyl-L-methionine-dependent methyltransferases 11
Rhodanese/Cell cycle control phosphatase Ferritin-like 11
Porins Porins 11
P-loop containing nucleoside triphosphate hydrolases lambda repressor-like DNA-binding domains 11
Molybdenum cofactor biosynthesis proteins CinA-like 11
Cytidine deaminase-like Dihydrofolate reductase-like 11
RuvA domain 2-like RuvA domain 2-like 11
Calcium ATPase, transduction domain A Metal cation-transporting ATPase, ATP-binding domain N 11
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 11
YrdC/RibB RibA-like 11
Ribonuclease H-like DNA/RNA polymerases 11
Thioredoxin-like Thioredoxin-like 11
MgtE N-terminal domain-like CBS-domain pair 11
Adenine nucleotide alpha hydrolases-like PheT/TilS domain 11
P-loop containing nucleoside triphosphate hydrolases vWA-like 11
Sensory domain-like Sporulation response regulatory protein Spo0B 11
P-loop containing nucleoside triphosphate hydrolases WD40 repeat-like 11
5' to 3' exonuclease, C-terminal subdomain DNA/RNA polymerases 11
5' to 3' exonuclease, C-terminal subdomain Ribonuclease H-like 11
alpha-helical ferredoxin Respiratory nitrate reductase 1 gamma chain 11
P-loop containing nucleoside triphosphate hydrolases Isocitrate/Isopropylmalate dehydrogenase-like 11
Dimeric alpha+beta barrel Dimeric alpha+beta barrel 11
PYP-like sensor domain (PAS domain) EAL domain-like 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11
Ribosomal protein S5 domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
Bacterial fluorinating enzyme, N-terminal domain Bacterial fluorinating enzyme, C-terminal domain 11
CBS-domain pair Nucleotidyltransferase 11
Glutathione synthetase ATP-binding domain-like Phosphoenolpyruvate/pyruvate domain 11
Glucocorticoid receptor-like (DNA-binding domain) P-loop containing nucleoside triphosphate hydrolases 11
Glutamyl tRNA-reductase catalytic, N-terminal domain Glutamyl tRNA-reductase dimerization domain 11
Nqo5-like HydB/Nqo4-like 11
Nucleotidyltransferase substrate binding subunit/domain Poly A polymerase C-terminal region-like 11
ACT-like 4Fe-4S ferredoxins 11
Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 11
Class II aaRS and biotin synthetases Translation proteins 11
Ribosome binding protein Y (YfiA homologue) Nucleic acid-binding proteins 11
Riboflavin synthase domain-like Riboflavin synthase domain-like 11
NAD(P)-binding Rossmann-fold domains ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
NAD(P)-binding Rossmann-fold domains Isocitrate/Isopropylmalate dehydrogenase-like 11
6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 11
Homeodomain-like Homeodomain-like 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
Rho N-terminal domain-like Nucleic acid-binding proteins 11
Class I glutamine amidotransferase-like Class I glutamine amidotransferase-like 11
alpha/beta-Hydrolases Galactose-binding domain-like 11
alpha/beta-Hydrolases OsmC-like 11
Alkaline phosphatase-like TPR-like 11
YVTN repeat-like/Quinoprotein amine dehydrogenase Calcium-dependent phosphotriesterase 11
Sec-C motif ARM repeat 11
Metallo-hydrolase/oxidoreductase Flavoproteins 11
Tex N-terminal region-like Ribonuclease H-like 11
P-loop containing nucleoside triphosphate hydrolases Quinoprotein alcohol dehydrogenase-like 11
P-loop containing nucleoside triphosphate hydrolases Ribonuclease H-like 11
Rubredoxin-like Superoxide reductase-like 11
CheY-like FAD/NAD(P)-binding domain 11
Multiheme cytochromes Nitrous oxide reductase, N-terminal domain 11
Nucleotidyltransferase substrate binding subunit/domain Nucleotidyltransferase substrate binding subunit/domain 11
Trm112p-like S-adenosyl-L-methionine-dependent methyltransferases 11
Transcription factor NusA, N-terminal domain Nucleic acid-binding proteins 11
Tetrapyrrole methylase S-adenosyl-L-methionine-dependent methyltransferases 11
Calcium-dependent phosphotriesterase Pectin lyase-like 11
NHL repeat 3-carboxy-cis,cis-mucoante lactonizing enzyme 11
Nucleotidyltransferase Nucleotidyltransferase 11
NAD(P)-binding Rossmann-fold domains PYP-like sensor domain (PAS domain) 11
CbiD-like CbiD-like 11
SirA-like DsrEFH-like 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
MoeA C-terminal domain-like Periplasmic binding protein-like II 11
CRISPR-associated protein CRISPR-associated protein 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 11
Aldolase Sensory domain-like 11
Chorismate mutase II Periplasmic binding protein-like II 11
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 11
Sensory domain-like Nucleotide cyclase 11
Homodimeric domain of signal transducing histidine kinase CheW-like 11
LysM domain N-acetylmuramoyl-L-alanine amidase-like 11
Radical SAM enzymes Nitrogenase accessory factor-like 11
Nqo1 FMN-binding domain-like 4Fe-4S ferredoxins 11
Carbamate kinase-like PUA domain-like 11
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 11
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 11
RBP11-like subunits of RNA polymerase C-terminal domain of RNA polymerase alpha subunit 11
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 11
PheT/TilS domain Anticodon-binding domain of PheRS 11
CheY-like 4Fe-4S ferredoxins 11
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
Enolase N-terminal domain-like Enolase C-terminal domain-like 11
Histidine-containing phosphotransfer domain, HPT domain Histidine-containing phosphotransfer domain, HPT domain 11
Homeodomain-like Ribonuclease H-like 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
TPR-like Periplasmic binding protein-like I 11
Tex N-terminal region-like Nucleic acid-binding proteins 11
TPR-like Integrin alpha N-terminal domain 11
RNase III domain-like dsRNA-binding domain-like 11
FAD-linked oxidoreductase ALDH-like 11
Ribonuclease PH domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
2Fe-2S ferredoxin-like Molybdenum cofactor-binding domain 11
Metal cation-transporting ATPase, ATP-binding domain N HAD-like 11
GroES-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Nucleic acid-binding proteins 11
TGS-like ACT-like 11
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain "Winged helix" DNA-binding domain 11
Sensory domain-like Methyl-accepting chemotaxis protein (MCP) signaling domain 11
GAD domain-like Glu-tRNAGln amidotransferase C subunit 11
Metallo-hydrolase/oxidoreductase Rhodanese/Cell cycle control phosphatase 11
Carbamate kinase-like ACT-like 11
Macro domain-like Zn-dependent exopeptidases 11
Nucleotidylyl transferase Ribosomal protein L25-like 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain ACT-like 11
DHH phosphoesterases CBS-domain pair 11
Chorismate mutase II ACT-like 11
cAMP-binding domain-like PP2C-like 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
P-loop containing nucleoside triphosphate hydrolases R3H domain 11
R1 subunit of ribonucleotide reductase, N-terminal domain PFL-like glycyl radical enzymes 11
Alpha subunit of glutamate synthase, C-terminal domain FAD/NAD(P)-binding domain 11
Radical SAM enzymes Sec-C motif 11
RelE-like P-loop containing nucleoside triphosphate hydrolases 11
YWTD domain YWTD domain 11
TolB, N-terminal domain Tricorn protease N-terminal domain 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
Ribonuclease H-like HRDC-like 11
Transposase IS200-like TrpR-like 11
PDZ domain-like ClpP/crotonase 11
PA domain Zn-dependent exopeptidases 11
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 11
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 11
Methyl-accepting chemotaxis protein (MCP) signaling domain Methyl-accepting chemotaxis protein (MCP) signaling domain 11
P-loop containing nucleoside triphosphate hydrolases HprK N-terminal domain-like 11
Poly A polymerase C-terminal region-like ACT-like 11
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 11
2Fe-2S ferredoxin-like CO dehydrogenase molybdoprotein N-domain-like 11
Class II aaRS and biotin synthetases YbaK/ProRS associated domain 11
"Winged helix" DNA-binding domain NAD(P)-binding Rossmann-fold domains 11
PIN domain-like DNA/RNA polymerases 11
Thiamin diphosphate-binding fold (THDP-binding) 4Fe-4S ferredoxins 11
PheT/TilS domain Putative DNA-binding domain 11
LysM domain LysM domain 11
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 11
HMA, heavy metal-associated domain HMA, heavy metal-associated domain 11
Dihydropteroate synthetase-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
NAD(P)-binding Rossmann-fold domains Homodimeric domain of signal transducing histidine kinase 11
PUA domain-like Nucleotidylyl transferase 11
Nucleotide-diphospho-sugar transferases Guanosine diphospho-D-mannose pyrophosphorylase/mannose-6-phosphate isomerase linker domain 11
YegP-like YegP-like 11
Translation proteins Translation proteins 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
PilZ domain-like PilZ domain-like 11
PheT/TilS domain Class II aaRS and biotin synthetases 11
Histidine-containing phosphotransfer domain, HPT domain CheW-like 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphoenolpyruvate/pyruvate domain 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Nucleic acid-binding proteins 11
Nucleotidylyl transferase Nucleic acid-binding proteins 11
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 11
SMAD/FHA domain Homodimeric domain of signal transducing histidine kinase 11
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 11
Subtilisin-like E set domains 11
HAMP domain-like PP2C-like 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
LCCL domain LCCL domain 11
HIT-like Phospholipase D/nuclease 11
Prokaryotic type KH domain (KH-domain type II) Prokaryotic type KH domain (KH-domain type II) 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
GIY-YIG endonuclease C-terminal UvrC-binding domain of UvrB 11
lambda repressor-like DNA-binding domains Periplasmic binding protein-like II 11
Tetrapyrrole methylase HemD-like 11
MoeA N-terminal region -like Periplasmic binding protein-like II 11
Nqo1C-terminal domain-like 4Fe-4S ferredoxins 11
Diaminopimelate epimerase-like Diaminopimelate epimerase-like 11
PIN domain-like Ribonuclease H-like 11
Prokaryotic type I DNA topoisomerase Zinc beta-ribbon 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
Radical SAM enzymes Radical SAM enzymes 11
Nucleic acid-binding proteins Anticodon-binding domain of PheRS 11
Molybdenum cofactor-binding domain Molybdenum cofactor-binding domain 11
2Fe-2S ferredoxin-like Fe-only hydrogenase 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheW-like 11
cAMP-binding domain-like Rhodanese/Cell cycle control phosphatase 11
Tryptophan synthase beta subunit-like PLP-dependent enzymes Nucleotidylyl transferase 11
Acyl-CoA N-acyltransferases (Nat) Acyl-CoA N-acyltransferases (Nat) 11
4Fe-4S ferredoxins Adenine nucleotide alpha hydrolases-like 11

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