SUPERFAMILY 1.75 HMM library and genome assignments server

"seed plants" superfamily assignments

Taxonomy browser entry

Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta

Descendants list: r6, Ov1, Tc, z7, ze, BD, MG, LPn, jS2, Eg, wUr, w3, vt, p5l, Zra, UJc, cwb, kle, Bra, Cs, Phe, Cc, os, oj, NGD, Ppi, 9UD, pt, Mba, r9u, p06, CU, Ac, mw, l4, Ppa, pT, Fzj, e0I, PE, ACh, Og, X03, QxX, 117, Si, AnK, yg, erq, t09, od, at, ME

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Assignment statistics

Sequences: 25006 with assignment
Domains: 42450 total
1113 unique superfamilies
1030 unique families
38.1 average superfamily size
97 % formed by duplication
Domain combinations: 2094 domain pairs
12750 unique architectures

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Superfamily assignments




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