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Domain combinations for Hypothetical protein PA1324 superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a Hypothetical protein PA1324 domain in that genome.

Complete genomes
Genome Number Proteins

Callithrix_jacchus_71_3.2.1 (White-tufted-ear marmoset) 1 1

Echinops_telfairi_71 (Small Madagascar hedgehog) 1 1

Tribolium_castaneum_3.0 (Red flour beetle) 1 1

Hymenolepis_microstoma_ 1 1

Taenia_solium_ (Pork tapeworm) 1 1

Proterospongia_sp._ATCC_50818_ 1 1

Sphaeroforma_arctica_JP610_ 43 16

Aspergillus_zonatus_v1.0 10 2

Dictyostelium_discoideum 112 4

Dictyostelium_purpureum_ 99 5

Eucalyptus_grandis_v201 (Rose gum) 1 1

Thellungiella_halophila_v173 1 1

Brassica_rapa_Chiifu-401_1.2 (Field mustard) 1 1

Capsella_rubella_v183 1 1

Arabidopsis_lyrata_ (Lyrate rockcress) 1 1

Arabidopsis_thaliana_10 (Thale cress) 1 1

Carica_papaya_ (Papaya) 1 1

Medicago_truncatula_ (Barrel medic) 1 1

Prunus_persica_v139 (Peach) 1 1

Linum_usitatissimum_v200 (Flax) 1 1

Manihot_esculenta_v147 (Cassava) 1 1

Vitis_vinifera_ (Wine grape) 1 1

Aquilegia_coerulea_v195 1 1

Brachypodium_distachyon_ 1 1

Zea_mays_subsp._mays_ (Maize) 1 1

Zea_mays_v181 (Maize) 1 1

Panicum_virgatum_v202 (Switchgrass) 2 2

Physcomitrella_patens_subsp._patens_ 1 1

Thalassiosira_pseudonana_CCMP1335 24 10

Emiliania_huxleyi_CCMP1516_ 3 1

Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Paris)' 1 1

Rhodopirellula_baltica_SH_1 27 10

Isosphaera_pallida_ATCC_43644 32 6

Pirellula_staleyi_DSM_6068 12 7

Planctomyces_brasiliensis_DSM_5305 1 1

Bifidobacterium_dentium_Bd1 1 1

Bifidobacterium_bifidum_S17 1 1

Nakamurella_multipartita_DSM_44233 1 1

Frankia_symbiont_of_Datisca_glomerata 1 1

Kitasatospora_setae_KM-6054 2 2

Streptomyces_bingchenggensis_BCW-1 2 2

Streptomyces_violaceusniger_Tu_4113 1 1

Streptomyces_cattleya_NRRL_8057_=_DSM_46488 1 1

Streptomyces_scabiei_87.22 1 1

Streptomyces_hygroscopicus_subsp._jinggangensis_5008 1 1

Thermobispora_bispora_DSM_43833 1 1

Actinosynnema_mirum_DSM_43827 53 21

Saccharomonospora_viridis_DSM_43017 1 1

Pseudonocardia_dioxanivorans_CB1190 2 2

Saccharopolyspora_erythraea_NRRL_2338 2 1

Amycolatopsis_mediterranei_U32 7 4

Kribbella_flavida_DSM_17836 1 1

Rhodococcus_erythropolis_PR4 1 1

Corynebacterium_ulcerans_0102 8 2

Corynebacterium_urealyticum_DSM_7109 1 1

Corynebacterium_pseudotuberculosis_316 3 1

Corynebacterium_diphtheriae_NCTC_13129 4 3

Isoptericola_variabilis_225 1 1

Cellulomonas_fimi_ATCC_484 1 1

[Cellvibrio]_gilvus_ATCC_13127 1 1

Arthrobacter_sp._FB24 2 2

Arthrobacter_arilaitensis_Re117 3 2

Arthrobacter_aurescens_TC1 1 1

Renibacterium_salmoninarum_ATCC_33209 9 2

Arcanobacterium_haemolyticum_DSM_20595 1 1

Conexibacter_woesei_DSM_14684 11 6

Mesotoga_prima_MesG1.Ag.4.2 1 1

Marinitoga_piezophila_KA3 1 1

Caldilinea_aerophila_DSM_14535_=_NBRC_104270 6 6

Anaerolinea_thermophila_UNI-1 1 1

Herpetosiphon_aurantiacus_DSM_785 17 1

Roseiflexus_sp._RS-1 24 4

Roseiflexus_castenholzii_DSM_13941 29 4

Chloroflexus_sp._Y-400-fl 49 3

Chloroflexus_aggregans_DSM_9485 51 3

Chloroflexus_aurantiacus_J-10-fl 49 3

Thermovibrio_ammonificans_HB-1 1 1

Gemmatimonas_aurantiaca_T-27 2 1

Fibrobacter_succinogenes_subsp._succinogenes_S85 1 1

Candidatus_Koribacter_versatilis_Ellin345 2 2

Candidatus_Solibacter_usitatus_Ellin6076 4 4

Granulicella_tundricola_MP5ACTX9 1 1

Melioribacter_roseus_P3M 2 1

Chlorobium_tepidum_TLS 1 1

Chloroherpeton_thalassium_ATCC_35110 1 1

Belliella_baltica_DSM_15883 2 2

Cyclobacterium_marinum_DSM_745 2 2

Marivirga_tractuosa_DSM_4126 2 2

Leadbetterella_byssophila_DSM_17132 1 1

Dyadobacter_fermentans_DSM_18053 3 3

Cytophaga_hutchinsonii_ATCC_33406 2 2

Spirosoma_linguale_DSM_74 24 8

Runella_slithyformis_DSM_19594 23 7

Prevotella_melaninogenica_ATCC_25845 1 1

Niastella_koreensis_GR20-10 1 1

Chitinophaga_pinensis_DSM_2588 1 1

Haliscomenobacter_hydrossis_DSM_1100 22 5

Saprospira_grandis_str._Lewin 2 2

Pedobacter_saltans_DSM_12145 1 1

Pedobacter_heparinus_DSM_2366 1 1

Fluviicola_taffensis_DSM_16823 1 1

Owenweeksia_hongkongensis_DSM_17368 1 1

Zunongwangia_profunda_SM-A87 1 1

Croceibacter_atlanticus_HTCC2559 32 2

Cellulophaga_algicola_DSM_14237 1 1

Flavobacteriaceae_bacterium_3519-10 1 1

Capnocytophaga_ochracea_DSM_7271 1 1

Weeksella_virosa_DSM_16922 1 1

Flavobacterium_columnare_ATCC_49512 1 1

Flavobacterium_johnsoniae_UW101 1 1

Dictyoglomus_turgidum_DSM_6724 1 1

Dictyoglomus_thermophilum_H-6-12 1 1

Coraliomargarita_akajimensis_DSM_45221 2 2

Opitutus_terrae_PB90-1 1 1

Deinococcus_gobiensis_I-0 3 3

Deinococcus_deserti_VCD115 3 3

Deinococcus_maricopensis_DSM_21211 1 1

Deinococcus_geothermalis_DSM_11300 3 3

Deinococcus_proteolyticus_MRP 1 1

Deinococcus_radiodurans_R1 2 2

Oceanithermus_profundus_DSM_14977 3 3

Meiothermus_silvanus_DSM_9946 2 2

Meiothermus_ruber_DSM_1279 2 2

Thermus_sp._CCB_US3_UF1 3 2

Thermus_scotoductus_SA-01 2 1

Thermus_thermophilus_HB27 1 1

Selenomonas_ruminantium_subsp._lactilytica_TAM6421 1 1

Ruminococcus_albus_7 4 2

Anaerococcus_prevotii_DSM_20548 1 1

Eubacterium_limosum_KIST612 3 2

Filifactor_alocis_ATCC_35896 2 2

Clostridium_phytofermentans_ISDg 1 1

Clostridium_perfringens_ATCC_13124 1 1

Clostridium_botulinum_A_str._ATCC_3502 1 1

Caldicellulosiruptor_kronotskyensis_2002 1 1

Halanaerobium_hydrogeniformans 2 2

Halanaerobium_praevalens_DSM_2228 1 1

Carnobacterium_sp._17-4 1 1

Enterococcus_faecalis_62 1 1

Exiguobacterium_sibiricum_255-15 1 1

Paenibacillus_sp._JDR-2 1 1

Listeria_welshimeri_serovar_6b_str._SLCC5334 2 2

Listeria_innocua_Clip11262 1 1

Listeria_seeligeri_serovar_1/2b_str._SLCC3954 3 3

Listeria_monocytogenes_serotype_4b_str._CLIP_80459 3 3

Listeria_ivanovii_subsp._ivanovii_PAM_55 2 2

Lysinibacillus_sphaericus_C3-41 1 1

Oceanobacillus_iheyensis_HTE831 1 1

Macrococcus_caseolyticus_JCSC5402 1 1

Staphylococcus_pseudintermedius_HKU10-03 7 2

Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305 1 1

Staphylococcus_lugdunensis_HKU09-01 2 1

Staphylococcus_haemolyticus_JCSC1435 2 1

Staphylococcus_epidermidis_RP62A 2 1

Staphylococcus_aureus_subsp._aureus_JH1 10 3

Sulfurimonas_denitrificans_DSM_1251 1 1

Nitratifractor_salsuginis_DSM_16511 23 5

Sulfurovum_sp._NBC37-1 1 1

Desulfurivibrio_alkaliphilus_AHT2 2 2

Desulfatibacillum_alkenivorans_AK-01 2 2

Desulfococcus_oleovorans_Hxd3 3 2

Desulfovibrio_vulgaris_subsp._vulgaris_DP4 2 2

Geobacter_daltonii_FRC-32 1 1

Geobacter_sp._M21 2 2

Geobacter_uraniireducens_Rf4 1 1

Geobacter_bemidjiensis_Bem 2 2

Geobacter_sulfurreducens_KN400 1 1

Geobacter_metallireducens_GS-15 9 2

Haliangium_ochraceum_DSM_14365 1 1

Sorangium_cellulosum_'So_ce_56' 4 2

Stigmatella_aurantiaca_DW4/3-1 1 1

Corallococcus_coralloides_DSM_2259 1 1

Myxococcus_xanthus_DK_1622 1 1

Sideroxydans_lithotrophicus_ES-1 1 1

Methylotenera_versatilis_301 1 1

Methylovorus_sp._MP688 1 1

Methylovorus_glucosetrophus_SIP3-4 1 1

Methylobacillus_flagellatus_KT 4 2

Cupriavidus_metallidurans_CH34 2 2

Burkholderia_sp._CCGE1002 1 1

Burkholderia_xenovorans_LB400 1 1

Verminephrobacter_eiseniae_EF01-2 2 2

Ramlibacter_tataouinensis_TTB310 1 1

Delftia_sp._Cs1-4 1 1

Delftia_acidovorans_SPH-1 2 2

Polaromonas_sp._JS666 1 1

Polaromonas_naphthalenivorans_CJ2 1 1

Variovorax_paradoxus_S110 1 1

Janthinobacterium_sp._Marseille 2 1

Advenella_kashmirensis_WT001 1 1

Taylorella_asinigenitalis_MCE3 1 1

Taylorella_equigenitalis_MCE9 1 1

Nitrosomonas_sp._Is79A3 1 1

Brevundimonas_subvibrioides_ATCC_15264 2 2

Caulobacter_sp._K31 1 1

Phenylobacterium_zucineum_HLK1 1 1

Sphingopyxis_alaskensis_RB2256 1 1

Dinoroseobacter_shibae_DFL_12 7 2

Rhodobacter_sphaeroides_ATCC_17029 1 1

Methylobacterium_extorquens_AM1 1 1

Sinorhizobium_meliloti_AK83 1 1

Mesorhizobium_sp._BNC1 4 4

Mesorhizobium_ciceri_biovar_biserrulae_WSM1271 1 1

Bradyrhizobium_japonicum_USDA_110 1 1

Tolumonas_auensis_DSM_9187 1 1

Vibrio_splendidus_LGP32 1 1

Psychromonas_ingrahamii_37 3 3

Ferrimonas_balearica_DSM_9799 1 1

Shewanella_pealeana_ATCC_700345 1 1

Shewanella_woodyi_ATCC_51908 1 1

Shewanella_amazonensis_SB2B 1 1

Shewanella_frigidimarina_NCIMB_400 1 1

Pseudoalteromonas_sp._SM9913 1 1

Pseudoalteromonas_atlantica_T6c 1 1

Teredinibacter_turnerae_T7901 2 2

Saccharophagus_degradans_2-40 1 1

Glaciecola_sp._4H-3-7+YE-5 1 1

Chromohalobacter_salexigens_DSM_3043 1 1

Halomonas_elongata_DSM_2581 1 1

Dichelobacter_nodosus_VCS1703A 1 1

Thiocystis_violascens_DSM_198 10 1

Nitrosococcus_halophilus_Nc4 1 1

Pectobacterium_atrosepticum_SCRI1043 1 1

Pseudomonas_syringae_pv._tomato_str._DC3000 1 1

Pseudomonas_fulva_12-X 1 1

Pseudomonas_protegens_Pf-5 1 1

Pseudomonas_aeruginosa_UCBPP-PA14 1 1

Psychrobacter_arcticus_273-4 1 1

Psychrobacter_cryohalolentis_K5 1 1

'Nostoc_azollae'_0708 4 1

Nostoc_punctiforme_PCC_73102 2 2

Nostoc_sp._PCC_7120 10 3

Anabaena_variabilis_ATCC_29413 1 1

Trichodesmium_erythraeum_IMS101 21 3

Acaryochloris_marina_MBIC11017 1 1

Cyanothece_sp._PCC_8802 1 1

Microcystis_aeruginosa_NIES-843 1 1

Methanocella_arvoryzae_MRE50 3 3

Methanosaeta_harundinacea_6Ac 3 3

Methanosaeta_thermophila_PT 9 3

Methanosaeta_concilii_GP6 7 2

Methanohalobium_evestigatum_Z-7303 17 3

Methanococcoides_burtonii_DSM_6242 4 1

Methanosarcina_acetivorans_C2A 1 1

Methanosarcina_mazei_Go1 1 1

Methanosarcina_barkeri_str._Fusaro 1 1

Methanohalophilus_mahii_DSM_5219 2 2

Methanosphaerula_palustris_E1-9c 2 2

Methanospirillum_hungatei_JF-1 1 1

Methanoculleus_bourgensis_MS2 7 3

Methanoculleus_marisnigri_JR1 3 2

Natrinema_sp._J7-2 1 1

Methanococcus_maripaludis_C5 6 1

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Longest transcript per gene
Genome Number Proteins

Callithrix_jacchus_69_3.2.1 (White-tufted-ear marmoset) 1 1

Echinops_telfairi_69 (Small Madagascar hedgehog) 1 1

Others
Genome Number Proteins

Lotus_japonicus__(Early_assembly) 1 1

Ricinus_communis__(Early_assembly) (Castor bean) 1 1

NCBI_plasmid_sequences_(Plasmids) 39 29

TargetDB__(Targets) 31 17

STRING_v9.0_(STRING) 873 325

Uniprot_2013_05_(Uniprot) 5235 2238

Protein_Data_Bank_(all_PDB_sequenc) 14 14

PDB_chains_(SCOP_1.75)_(PDB) 1 1

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Domain combinations for Hypothetical protein PA1324 superfamily in groups of genomes